Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	transcript_name	strand	transcript_status	amino_acid_change	ucsc_cons	normal_depth	normal_vaf	tumor_depth	tumor_vaf	rna_depth	rna_vaf	polyphen	sift	condel	domain
NOC2L	26155	genome.wustl.edu	37	1	891361	891361	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015658.3	-1	validated	p.D214N	1.000	234	0%	467	34.3%	49	44.8%	probably_damaging(0.999)	tolerated(0.26)	deleterious(0.524)	NULL
NOC2L	26155	genome.wustl.edu	37	1	892595	892595	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015658.3	-1	validated	p.D80Y	1.000	95	0%	137	31.4%	36	41.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CCNL2	81669	genome.wustl.edu	37	1	1334537	1334537	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030937.4	-1	validated	p.E50D	1.000	11	0%	19	63.2%	22	36.3%	benign(0.022)	tolerated(0.53)	neutral(0.009)	HMMPfam_Cyclin_N
ATAD3B	83858	genome.wustl.edu	37	1	1416264	1416264	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031921.4	+1	provisional	p.E154D	0.998	252	0%	410	34.4%	29	3.4%	benign(0.032)	tolerated(0.18)	neutral(0.058)	NULL
CDK11A	728642	genome.wustl.edu	37	1	1588901	1588901	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000340677	-1	known	p.T12N	1.000	319	0%	539	21.3%	8	25%	-	-	-	NULL
CDK11A	728642	genome.wustl.edu	37	1	1634968	1634968	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024011.2	-1	reviewed	p.L669	0.978	183	0%	254	29.9%	51	21.5%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
CDK11A	728642	genome.wustl.edu	37	1	1654161	1654161	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024011.2	-1	reviewed	p.K33Q	0.997	298	0%	519	19.5%	16	6.2%	probably_damaging(0.996)	tolerated(0.41)	deleterious(0.477)	NULL
KIAA1751	85452	genome.wustl.edu	37	1	1890623	1890623	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080484.1	-1	predicted	p.I596S	0.845	129	0%	219	33.8%	0	-	possibly_damaging(0.731)	deleterious(0.01)	deleterious(0.673)	NULL
KIAA1751	85452	genome.wustl.edu	37	1	1920371	1920371	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080484.1	-1	predicted	p.L37F	0.000	27	0%	83	33.7%	0	-	possibly_damaging(0.951)	tolerated(0.07)	deleterious(0.713)	NULL
GABRD	2563	genome.wustl.edu	37	1	1956382	1956382	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000815.4	+1	reviewed	p.A24T	1.000	47	0%	77	37.7%	0	-	benign(0.18)	tolerated(0.46)	neutral(0.029)	NULL
PLCH2	9651	genome.wustl.edu	37	1	2415979	2415979	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014638.2	+1	provisional	p.L246	1.000	71	0%	59	30.5%	0	-	-	-	-	HMMPfam_efhand_like,superfamily_EF-hand
TNFRSF14	8764	genome.wustl.edu	37	1	2488119	2488119	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003820.2	+1	reviewed	p.D6Y	0.000	64	0%	61	29.5%	10	0%	benign(0.01)	deleterious(0.01)	neutral(0.406)	NULL
MMEL1	79258	genome.wustl.edu	37	1	2523037	2523037	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033467.3	-1	reviewed	p.I724	0.733	102	0%	175	30.9%	0	-	-	-	-	"HMMPfam_Peptidase_M13,superfamily_Metalloproteases (""zincins"") catalytic domain"
PRDM16	63976	genome.wustl.edu	37	1	3342229	3342229	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022114.3	+1	reviewed	p.F1007L	1.000	83	0%	84	33.3%	0	-	possibly_damaging(0.94)	deleterious(0)	deleterious(0.830)	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
LRRC47	57470	genome.wustl.edu	37	1	3701710	3701710	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020710.2	-1	validated	p.E379K	1.000	69	1.4%	92	42.4%	50	46%	benign(0.069)	deleterious(0.01)	neutral(0.410)	HMMPfam_B3_4
CEP104	9731	genome.wustl.edu	37	1	3746507	3746507	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014704.3	-1	validated	p.R631*	0.001	115	0%	213	29.6%	7	14.2%	-	-	-	superfamily_ARM repeat
CEP104	9731	genome.wustl.edu	37	1	3765182	3765182	+	Nonsense_Mutation	SNP	G	G	A	rs145420390		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014704.3	-1	validated	p.R93*	1.000	150	0%	229	31.9%	10	50%	-	-	-	NULL
LOC100287848	100287848	genome.wustl.edu	37	1	4772032	4772032	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342029.1	-1	model	p.E219K	0.987	24	0%	10	50%	0	-	-	-	-	NULL
NPHP4	261734	genome.wustl.edu	37	1	5924557	5924557	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015102.2	-1	reviewed	p.F1279	0.001	27	0%	33	42.4%	8	12.5%	-	-	-	NULL
KCNAB2	8514	genome.wustl.edu	37	1	6147554	6147554	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003636.2	+1	reviewed	p.K118N	1.000	149	0%	104	29.8%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Aldo_ket_red,superfamily_NAD(P)-linked oxidoreductase
CHD5	26038	genome.wustl.edu	37	1	6170489	6170489	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015557.1	-1	provisional	p.E1783K	1.000	182	0%	257	34.2%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_CHDCT2
RPL22	6146	genome.wustl.edu	37	1	6257713	6257713	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000983.3	-1	reviewed	p.F39Y	1.000	80	0%	245	35.9%	1134	39.5%	probably_damaging(0.976)	deleterious(0)	deleterious(0.863)	HMMPfam_Ribosomal_L22e
ICMT	23463	genome.wustl.edu	37	1	6293654	6293654	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012405.3	-1	reviewed	p.A112T	1.000	125	0%	248	33.9%	20	45%	benign(0.006)	tolerated(0.08)	neutral(0.300)	NULL
ESPN	83715	genome.wustl.edu	37	1	6488439	6488439	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031475.2	+1	reviewed	p.D150Y	1.000	69	0%	89	33.7%	0	-	probably_damaging(1)	tolerated(0.24)	deleterious(0.537)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
TAS1R1	80835	genome.wustl.edu	37	1	6638793	6638793	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138697.3	+1	reviewed	p.F559L	0.992	74	0%	105	42.9%	0	-	benign(0.309)	tolerated(0.23)	neutral(0.138)	NULL
DNAJC11	55735	genome.wustl.edu	37	1	6697387	6697387	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018198.3	-1	validated	p.V465	0.540	183	0%	291	33.7%	37	37.8%	-	-	-	NULL
CAMTA1	23261	genome.wustl.edu	37	1	7724937	7724937	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015215.1	+1	validated	p.I777T	1.000	27	0%	29	41.4%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
CAMTA1	23261	genome.wustl.edu	37	1	7798336	7798336	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015215.1	+1	validated	p.L1326I	1.000	61	0%	113	32.7%	0	-	benign(0.001)	tolerated(0.12)	neutral(0.261)	NULL
PER3	8863	genome.wustl.edu	37	1	7886575	7886575	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016831.1	+1	reviewed	p.L657	0.008	111	0%	176	34.7%	3	0%	-	-	-	NULL
PER3	8863	genome.wustl.edu	37	1	7890144	7890144	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016831.1	+1	reviewed	p.S1037F	0.004	165	0%	240	28.3%	2	0%	possibly_damaging(0.928)	deleterious(0.04)	deleterious(0.724)	NULL
TNFRSF9	3604	genome.wustl.edu	37	1	7993307	7993307	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001561.4	-1	reviewed	p.A198	0.000	58	0%	195	36.4%	1	0%	-	-	-	NULL
TNFRSF9	3604	genome.wustl.edu	37	1	7998365	7998365	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001561.4	-1	reviewed	p.C78	0.020	93	0%	178	30.9%	0	-	-	-	-	HMMPfam_TNFR_c6,HMMSmart_TNFR,PatternScan_TNFR_NGFR_1,superfamily_SSF57586
SLC45A1	50651	genome.wustl.edu	37	1	8399751	8399751	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080397.1	+1	provisional	p.S658I	0.996	111	0%	205	31.7%	0	-	probably_damaging(0.956)	tolerated(0.25)	neutral(0.436)	superfamily_MFS general substrate transporter
RERE	473	genome.wustl.edu	37	1	8557479	8557479	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042681.1	-1	reviewed	p.Y330	1.000	110	0%	304	27.6%	17	17.6%	-	-	-	HMMPfam_ELM2
H6PD	9563	genome.wustl.edu	37	1	9323983	9323983	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004285.3	+1	reviewed	p.E477D	1.000	51	0%	93	32.3%	4	25%	benign(0.351)	tolerated(1)	neutral(0.111)	superfamily_SSF55347
C1orf200	644997	genome.wustl.edu	37	1	9714616	9714616	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_027045.1	-1	validated	NULL	0.974	10	0%	23	26.1%	0	-	-	-	-	-
PIK3CD	5293	genome.wustl.edu	37	1	9778942	9778942	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005026.3	+1	validated	p.A404V	0.996	54	0%	53	34%	0	-	possibly_damaging(0.659)	tolerated(0.16)	neutral(0.292)	HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,superfamily_C2_CaLB
NMNAT1	64802	genome.wustl.edu	37	1	10032143	10032143	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022787.3	+1	provisional	p.S4	0.009	102	0%	303	35.6%	4	50%	-	-	-	NULL
UBE4B	10277	genome.wustl.edu	37	1	10161233	10161233	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105562.1	+1	reviewed	p.K139Q	1.000	247	0%	565	31.5%	12	33.3%	benign(0.071)	tolerated(0.28)	neutral(0.036)	NULL
UBE4B	10277	genome.wustl.edu	37	1	10205065	10205065	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105562.1	+1	reviewed	p.E811K	1.000	96	0%	121	38%	15	46.6%	benign(0.424)	tolerated(0.17)	neutral(0.197)	HMMPfam_Ufd2P_core
KIF1B	23095	genome.wustl.edu	37	1	10402128	10402128	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015074.3	+1	reviewed	p.E1132D	1.000	201	0.5%	349	26.1%	0	-	possibly_damaging(0.474)	tolerated(0.05)	deleterious(0.502)	NULL
KIF1B	23095	genome.wustl.edu	37	1	10425623	10425623	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015074.3	+1	reviewed	p.A1511T	1.000	136	0%	255	38.8%	6	33.3%	benign(0.004)	tolerated(0.57)	neutral(0.006)	NULL
KIF1B	23095	genome.wustl.edu	37	1	10436636	10436636	+	Silent	SNP	G	G	A	rs188387287	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015074.3	+1	reviewed	p.S1768	0.591	94	0%	173	30.6%	5	40%	-	-	-	NULL
APITD1	378708	genome.wustl.edu	37	1	10490613	10490613	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198544.2	+1	reviewed	p.F13L	0.051	52	0%	77	37.7%	3	33.3%	benign(0.427)	tolerated(0.49)	neutral(0.150)	NULL
MTOR	2475	genome.wustl.edu	37	1	11169375	11169375	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004958.3	-1	reviewed	p.I2500M	0.859	216	0%	377	37.9%	36	41.6%	benign(0.429)	deleterious(0)	deleterious(0.584)	NULL
MTOR	2475	genome.wustl.edu	37	1	11313928	11313928	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004958.3	-1	reviewed	p.E270K	1.000	181	0%	361	31%	16	68.7%	possibly_damaging(0.585)	deleterious(0)	deleterious(0.646)	superfamily_ARM-type_fold
MTOR	2475	genome.wustl.edu	37	1	11317122	11317122	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004958.3	-1	reviewed	p.E124D	1.000	68	0%	154	35.1%	8	62.5%	benign(0.095)	tolerated(0.27)	neutral(0.041)	superfamily_ARM-type_fold
PTCHD2	57540	genome.wustl.edu	37	1	11562051	11562051	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020780.1	+1	validated	p.S334	0.995	38	0%	47	29.8%	1	0%	-	-	-	HMMPfam_Patched
PTCHD2	57540	genome.wustl.edu	37	1	11562865	11562865	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020780.1	+1	validated	p.Y409*	0.998	134	0%	168	37.5%	0	-	-	-	-	HMMPfam_Patched
PTCHD2	57540	genome.wustl.edu	37	1	11584048	11584048	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020780.1	+1	validated	p.S804	0.993	49	0%	43	25.6%	0	-	-	-	-	HMMPfam_Patched
FBXO44	93611	genome.wustl.edu	37	1	11715946	11715946	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014765.1	+1	reviewed	p.F18L	0.576	42	0%	62	37.1%	3	0%	possibly_damaging(0.543)	tolerated(0.49)	neutral(0.195)	HMMPfam_F-box,HMMSmart_SM00256,superfamily_F-box domain
AGTRAP	57085	genome.wustl.edu	37	1	11806168	11806168	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000476512	+1	known	p.L62	0.000	141	0%	239	35.1%	0	-	-	-	-	NULL
MTHFR	4524	genome.wustl.edu	37	1	11861298	11861298	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005957.4	-1	reviewed	p.R132H	0.019	80	0%	118	39.8%	7	14.2%	benign(0)	tolerated(0.06)	neutral(0.323)	HMMPfam_MTHFR,superfamily_FAD-linked oxidoreductase
MFN2	9927	genome.wustl.edu	37	1	12064093	12064093	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127660.1	+1	reviewed	p.K402T	0.929	82	0%	197	31.5%	21	47.6%	benign(0)	tolerated(0.15)	neutral(0.241)	NULL
AADACL4	343066	genome.wustl.edu	37	1	12711311	12711311	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013630.1	+1	provisional	p.R113Q	0.372	87	0%	133	41.4%	0	-	probably_damaging(0.997)	tolerated(0.09)	deleterious(0.762)	superfamily_SSF53474
PRAMEF12	390999	genome.wustl.edu	37	1	12835950	12835950	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080830.1	+1	provisional	p.Q184H	0.000	305	0%	461	36.4%	0	-	possibly_damaging(0.795)	deleterious(0.03)	deleterious(0.663)	superfamily_SSF52047
PRAMEF1	65121	genome.wustl.edu	37	1	12854476	12854476	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023013.1	+1	provisional	p.L234I	0.001	338	0%	547	13.5%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_SSF52047
PRAMEF2	65122	genome.wustl.edu	37	1	12920113	12920113	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023014.1	+1	provisional	p.E285*	0.012	108	0%	177	33.3%	0	-	-	-	-	superfamily_SSF52047
PRAMEF4	400735	genome.wustl.edu	37	1	12939574	12939574	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009611.2	-1	validated	p.L410V	0.001	410	0.2%	701	12.1%	0	-	benign(0.014)	tolerated(0.07)	neutral(0.320)	superfamily_SSF52047
PRAMEF10	343071	genome.wustl.edu	37	1	12954493	12954493	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039361.3	-1	validated	p.L264I	0.009	117	0%	223	35%	0	-	probably_damaging(0.996)	tolerated(0.21)	deleterious(0.506)	superfamily_SSF52047
LOC440563	440563	genome.wustl.edu	37	1	13183849	13183849	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136561.2	-1	validated	p.K8N	1.000	153	0%	294	26.5%	0	-	-	-	-	NULL
LOC645359	645359	genome.wustl.edu	37	1	13219480	13219480	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_928401.3	-1	model	p.R49M	0.000	114	0%	175	25.1%	0	-	benign(0.002)	tolerated(0.11)	neutral(0.272)	NULL
PRAMEF17	391004	genome.wustl.edu	37	1	13717065	13717065	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099851.1	+1	provisional	p.K184N	0.001	108	0%	236	32.2%	0	-	probably_damaging(0.96)	deleterious(0.04)	deleterious(0.752)	superfamily_RNI-like
PRDM2	7799	genome.wustl.edu	37	1	14106823	14106823	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012231.4	+1	reviewed	p.E845K	1.000	81	0%	124	33.1%	7	42.8%	unknown(0)	deleterious(0.01)	-	NULL
PRDM2	7799	genome.wustl.edu	37	1	14108140	14108140	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012231.4	+1	reviewed	p.D1284Y	1.000	43	0%	43	20.9%	11	54.5%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	NULL
PRDM2	7799	genome.wustl.edu	37	1	14108531	14108531	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012231.4	+1	reviewed	p.S1414L	0.251	66	0%	125	36.8%	14	21.4%	probably_damaging(0.962)	tolerated(0.1)	deleterious(0.692)	NULL
FHAD1	114827	genome.wustl.edu	37	1	15578288	15578288	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052929.1	+1	provisional	p.A3V	1.000	75	0%	141	27.7%	0	-	probably_damaging(0.98)	deleterious(0.04)	deleterious(0.773)	NULL
FHAD1	114827	genome.wustl.edu	37	1	15578370	15578370	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052929.1	+1	provisional	p.L30F	0.993	88	0%	161	28.6%	1	100%	possibly_damaging(0.839)	deleterious(0.04)	deleterious(0.669)	HMMPfam_FHA,HMMSmart_SM00240,superfamily_SMAD/FHA domain
FHAD1	114827	genome.wustl.edu	37	1	15627898	15627898	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052929.1	+1	provisional	p.I292	0.000	59	0%	92	35.9%	1	0%	-	-	-	NULL
FHAD1	114827	genome.wustl.edu	37	1	15701109	15701109	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052929.1	+1	provisional	p.E1165K	0.984	56	0%	82	43.9%	1	0%	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	NULL
CTRC	11330	genome.wustl.edu	37	1	15772173	15772173	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007272.2	+1	reviewed	p.R241W	0.000	60	0%	55	52.7%	1	100%	benign(0.001)	tolerated(0.18)	neutral(0.056)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
CASP9	842	genome.wustl.edu	37	1	15844781	15844781	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001229.2	-1	reviewed	p.G81D	1.000	74	0%	119	27.7%	14	71.4%	unknown(0)	tolerated(0.06)	-	HMMPfam_CARD,HMMSmart_SM00114,superfamily_DEATH domain
DNAJC16	23341	genome.wustl.edu	37	1	15863152	15863152	+	Silent	SNP	C	C	T	rs146729141	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015291.2	+1	provisional	p.D139	1.000	166	0%	255	31.4%	0	-	-	-	-	superfamily_Thioredoxin-like
AGMAT	79814	genome.wustl.edu	37	1	15905457	15905457	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024758.3	-1	validated	p.R206H	1.000	56	0%	92	27.2%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Arginase,superfamily_SSF52768
SPEN	23013	genome.wustl.edu	37	1	16254623	16254623	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015001.2	+1	reviewed	p.R630C	1.000	88	0%	158	32.3%	2	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SPEN	23013	genome.wustl.edu	37	1	16257322	16257322	+	Silent	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015001.2	+1	reviewed	p.R1529	0.948	166	0%	233	32.2%	5	80%	-	-	-	NULL
SPEN	23013	genome.wustl.edu	37	1	16261486	16261486	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015001.2	+1	reviewed	p.L2917	0.279	53	0%	97	38.1%	22	31.8%	-	-	-	NULL
CLCNKA	1187	genome.wustl.edu	37	1	16354380	16354380	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004070.3	+1	reviewed	p.I282	1.000	557	0%	800	28.7%	0	-	-	-	-	HMMPfam_Voltage_CLC,superfamily_Cl-channel_core
CLCNKB	1188	genome.wustl.edu	37	1	16372082	16372082	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000085.3	+1	reviewed	p.F44I	0.996	155	0%	195	30.8%	0	-	probably_damaging(0.961)	tolerated(0.08)	deleterious(0.704)	superfamily_Clc chloride channel
ARHGEF19	128272	genome.wustl.edu	37	1	16534579	16534579	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153213.3	-1	provisional	p.R185Q	0.666	56	0%	59	33.9%	7	14.2%	benign(0.169)	tolerated(0.14)	neutral(0.265)	NULL
FBXO42	54455	genome.wustl.edu	37	1	16577461	16577461	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018994.1	-1	provisional	p.R620C	1.000	81	0%	140	32.9%	41	43.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NECAP2	55707	genome.wustl.edu	37	1	16770193	16770193	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145277.1	+1	reviewed	p.Q53H	1.000	67	0%	123	36.6%	34	35.2%	benign(0.133)	deleterious(0.01)	neutral(0.417)	HMMPfam_DUF1681
CROCC	9696	genome.wustl.edu	37	1	17281813	17281813	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014675.3	+1	validated	p.E1158*	1.000	10	0%	14	35.7%	3	33.3%	-	-	-	NULL
PADI2	11240	genome.wustl.edu	37	1	17395725	17395725	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007365.2	-1	reviewed	p.F604	0.995	57	0%	138	31.2%	0	-	-	-	-	HMMPfam_PAD,superfamily_SSF55909
PADI1	29943	genome.wustl.edu	37	1	17566247	17566247	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013358.2	+1	reviewed	p.R534K	0.701	111	0%	185	34.1%	1	0%	benign(0)	tolerated(0.91)	-	HMMPfam_PAD,superfamily_Pentein
PADI4	23569	genome.wustl.edu	37	1	17682899	17682899	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012387.2	+1	reviewed	p.F501L	0.997	44	0%	66	28.8%	0	-	benign(0.31)	tolerated(0.34)	neutral(0.119)	HMMPfam_PAD,superfamily_Pentein
PADI4	23569	genome.wustl.edu	37	1	17690174	17690174	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012387.2	+1	reviewed	p.R639K	0.000	46	0%	71	35.2%	0	-	benign(0.002)	tolerated(0.33)	neutral(0.024)	HMMPfam_PAD,superfamily_Pentein
ACTL8	81569	genome.wustl.edu	37	1	18149705	18149705	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030812.2	+1	validated	p.E68K	0.972	78	0%	88	33%	0	-	benign(0.028)	tolerated(0.08)	neutral(0.301)	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067
IGSF21	84966	genome.wustl.edu	37	1	18618402	18618402	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032880.3	+1	validated	p.D76N	1.000	60	0%	71	39.4%	1	0%	probably_damaging(0.999)	tolerated(0.26)	deleterious(0.524)	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
MIR1290	100302276	genome.wustl.edu	37	1	19223618	19223618	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000408735	-1	known	NULL	0.003	47	0%	94	36.2%	0	-	-	-	-	-
UBR4	23352	genome.wustl.edu	37	1	19510611	19510611	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020765.2	-1	validated	p.R666Q	1.000	185	0%	297	34.7%	1	0%	probably_damaging(0.995)	tolerated(0.06)	deleterious(0.780)	NULL
UBR4	23352	genome.wustl.edu	37	1	19518683	19518683	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020765.2	-1	validated	p.G465W	1.000	43	0%	45	44.4%	2	50%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
KIAA0090	23065	genome.wustl.edu	37	1	19559253	19559253	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000375197	-1	known	p.E283K	1.000	133	0%	259	31.7%	25	32%	-	-	-	NULL
KIAA0090	23065	genome.wustl.edu	37	1	19571414	19571414	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015047.1	-1	predicted	p.R69Q	1.000	131	0%	239	33.5%	18	44.4%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_Quinoprotein alcohol dehydrogenase-like
UBXN10	127733	genome.wustl.edu	37	1	20517824	20517824	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152376.3	+1	provisional	p.S257Y	1.000	55	0%	69	39.1%	8	37.5%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMSmart_SM00166,superfamily_Ubiquitin-like
VWA5B1	127731	genome.wustl.edu	37	1	20680676	20680676	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039500.2	+1	validated	p.R1190C	1.000	24	0%	29	44.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PINK1	65018	genome.wustl.edu	37	1	20975574	20975574	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032409.2	+1	reviewed	p.I446	1.000	84	0%	115	35.7%	97	31.9%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PINK1	65018	genome.wustl.edu	37	1	20977076	20977076	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032409.2	+1	reviewed	p.E546D	1.000	59	0%	145	31.7%	125	24.8%	benign(0.043)	tolerated(0.41)	neutral(0.017)	NULL
KIF17	57576	genome.wustl.edu	37	1	21009301	21009301	+	Missense_Mutation	SNP	G	G	A	rs186978787	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020816.2	-1	validated	p.R770C	1.000	82	0%	117	34.2%	1	0%	possibly_damaging(0.823)	deleterious(0)	deleterious(0.756)	NULL
HP1BP3	50809	genome.wustl.edu	37	1	21106377	21106377	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016287.3	-1	validated	p.R42C	1.000	214	0%	392	27.3%	25	16%	unknown(0)	-	-	NULL
EIF4G3	8672	genome.wustl.edu	37	1	21188764	21188764	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003760.3	-1	validated	p.S967Y	1.000	229	0%	331	31.1%	12	16.6%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	HMMPfam_MIF4G,HMMSmart_SM00543,superfamily_ARM repeat
EIF4G3	8672	genome.wustl.edu	37	1	21205995	21205995	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003760.3	-1	validated	p.R759*	1.000	107	0%	127	26.8%	4	25%	-	-	-	HMMPfam_MIF4G,HMMSmart_SM00543,superfamily_ARM repeat
EIF4G3	8672	genome.wustl.edu	37	1	21296080	21296080	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003760.3	-1	validated	p.R145W	1.000	236	0%	357	31.4%	8	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ECE1	1889	genome.wustl.edu	37	1	21546454	21546454	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000436918	-1	known	p.L197M	1.000	128	0%	276	12.7%	28	3.5%	-	-	-	"HMMPfam_Peptidase_M13,superfamily_Metalloproteases (""zincins"") catalytic domain"
ECE1	1889	genome.wustl.edu	37	1	21551890	21551890	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000436918	-1	known	p.E91*	1.000	97	0%	190	26.3%	28	21.4%	benign(0.049)	tolerated(1)	neutral(0.003)	"HMMPfam_Peptidase_M13,superfamily_Metalloproteases (""zincins"") catalytic domain"
RAP1GAP	5909	genome.wustl.edu	37	1	21928224	21928224	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145658.1	-1	validated	p.E599D	1.000	85	0%	163	29.4%	6	0%	benign(0.013)	tolerated(0.19)	neutral(0.050)	NULL
USP48	84196	genome.wustl.edu	37	1	22032230	22032230	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032236.5	-1	reviewed	p.D792Y	1.000	77	0%	69	17.4%	9	44.4%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	NULL
USP48	84196	genome.wustl.edu	37	1	22078089	22078089	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032236.5	-1	reviewed	p.E229*	1.000	112	0%	192	29.7%	3	0%	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
HSPG2	3339	genome.wustl.edu	37	1	22207303	22207303	+	Missense_Mutation	SNP	C	C	T	rs189089389	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000374695	-1	known	p.R615H	1.000	26	0%	27	25.9%	5	20%	benign(0.001)	tolerated(0.15)	neutral(0.241)	HMMPfam_Laminin_B,HMMSmart_SM00281
HSPG2	3339	genome.wustl.edu	37	1	22216636	22216636	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000374695	-1	known	e6-2	0.995	138	0%	227	37%	0	-	-	-	-	-
CDC42	998	genome.wustl.edu	37	1	22405198	22405198	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000421089	+1	known	e2-1	1.000	42	0%	60	21.7%	0	-	-	-	-	-
CDC42	998	genome.wustl.edu	37	1	22412939	22412939	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039802.1	+1	reviewed	p.E62D	1.000	347	0%	369	30.4%	80	47.5%	possibly_damaging(0.441)	deleterious(0)	deleterious(0.589)	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
WNT4	54361	genome.wustl.edu	37	1	22446886	22446886	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030761.4	-1	reviewed	p.F238S	0.998	41	0%	46	34.8%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_wnt,HMMSmart_WNT1
ZBTB40	9923	genome.wustl.edu	37	1	22832590	22832590	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001083621.1	+1	validated	p.N406H	0.991	151	0%	150	33.3%	4	50%	possibly_damaging(0.491)	deleterious(0)	deleterious(0.608)	NULL
EPHA8	2046	genome.wustl.edu	37	1	22919851	22919851	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020526.3	+1	reviewed	p.R450W	0.987	22	0%	31	35.5%	0	-	probably_damaging(0.967)	tolerated(0.11)	deleterious(0.680)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
EPHA8	2046	genome.wustl.edu	37	1	22924314	22924314	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020526.3	+1	reviewed	p.D692	1.000	41	0%	46	19.6%	0	-	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
EPHA8	2046	genome.wustl.edu	37	1	22925489	22925489	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020526.3	+1	reviewed	p.F779	0.985	57	0%	54	29.6%	0	-	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
C1QA	712	genome.wustl.edu	37	1	22965562	22965562	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015991.2	+1	reviewed	p.D134N	0.999	53	0%	58	39.7%	266	0%	benign(0.002)	tolerated(0.76)	neutral(0.001)	HMMPfam_C1q,HMMSmart_SM00110,superfamily_TNF-like
KDM1A	23028	genome.wustl.edu	37	1	23406096	23406096	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015013.3	+1	reviewed	p.F678	0.164	595	0%	818	34.5%	192	37.5%	-	-	-	HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain,superfamily_FAD-linked reductases C-terminal domain
LUZP1	7798	genome.wustl.edu	37	1	23417828	23417828	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142546.1	-1	reviewed	p.R976Q	0.238	171	0%	202	24.3%	4	25%	benign(0.018)	tolerated(0.25)	neutral(0.037)	NULL
LUZP1	7798	genome.wustl.edu	37	1	23419111	23419111	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142546.1	-1	reviewed	p.N548	0.004	127	0%	200	36%	6	33.3%	-	-	-	NULL
HTR1D	3352	genome.wustl.edu	37	1	23520425	23520425	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000864.4	-1	validated	p.I96	0.001	228	0%	595	34.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
TCEA3	6920	genome.wustl.edu	37	1	23720419	23720419	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003196.1	-1	validated	p.L258F	1.000	111	0%	164	35.4%	10	10%	benign(0.381)	deleterious(0.01)	deleterious(0.527)	HMMPfam_TFIIS_M,superfamily_Elongation factor TFIIS domain 2,HMMSmart_SM00510
ASAP3	55616	genome.wustl.edu	37	1	23758216	23758216	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017707.3	-1	reviewed	p.S840L	0.000	108	0%	174	38.5%	10	30%	benign(0.045)	deleterious(0.03)	neutral(0.367)	NULL
TCEB3	6924	genome.wustl.edu	37	1	24075515	24075515	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003198.2	+1	reviewed	p.L53S	0.993	226	0%	324	28.4%	16	37.5%	possibly_damaging(0.664)	tolerated(0.11)	deleterious(0.506)	HMMSmart_SM00509,HMMPfam_TFIIS,superfamily_Conserved domain common to transcription factors TFIIS elongin A CRSP70
MYOM3	127294	genome.wustl.edu	37	1	24388446	24388446	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152372.3	-1	validated	p.L1308	0.998	171	0%	266	29.3%	1	0%	-	-	-	superfamily_Immunoglobulin
MYOM3	127294	genome.wustl.edu	37	1	24389663	24389663	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152372.3	-1	validated	p.K1241N	0.972	100	0%	124	38.7%	0	-	benign(0.001)	tolerated(0.33)	neutral(0.024)	superfamily_Immunoglobulin
IL22RA1	58985	genome.wustl.edu	37	1	24447508	24447508	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021258.2	-1	reviewed	p.I504	0.962	137	0%	311	31.8%	0	-	-	-	-	NULL
IL28RA	163702	genome.wustl.edu	37	1	24486060	24486060	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170743.2	-1	reviewed	p.E192K	0.027	183	0%	355	37.5%	5	20%	benign(0.058)	tolerated(1)	neutral(0.004)	superfamily_Fibronectin type III
RCAN3	11123	genome.wustl.edu	37	1	24857725	24857725	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013441.2	+1	validated	p.L71	0.969	67	0%	122	30.3%	7	57.1%	-	-	-	HMMPfam_Calcipressin
SRRM1	10250	genome.wustl.edu	37	1	24995707	24995707	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005839.3	+1	validated	p.K611N	1.000	140	0%	351	35.3%	31	35.4%	unknown(0)	tolerated(0.13)	-	NULL
RHD	6007	genome.wustl.edu	37	1	25627476	25627476	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016124.3	+1	reviewed	p.A176T	0.819	256	0%	373	33.5%	0	-	benign(0.006)	deleterious(0.01)	neutral(0.406)	HMMPfam_Ammonium_transp,superfamily_Ammonium ransporter (Pfam 00909)
TMEM57	55219	genome.wustl.edu	37	1	25785230	25785230	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018202.4	+1	validated	p.R334Q	1.000	70	0%	110	34.5%	17	17.6%	probably_damaging(0.99)	tolerated(0.17)	deleterious(0.500)	HMMPfam_Macoilin
TMEM57	55219	genome.wustl.edu	37	1	25812189	25812189	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018202.4	+1	validated	p.R467*	1.000	150	0%	270	33.3%	34	14.7%	-	-	-	superfamily_Prefoldin,HMMPfam_Macoilin
SEPN1	57190	genome.wustl.edu	37	1	26138247	26138247	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000354177	+1	known	p.I352	0.915	60	0%	91	39.6%	32	28.1%	-	-	-	NULL
SEPN1	57190	genome.wustl.edu	37	1	26139207	26139207	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000354177	+1	known	p.F403	0.928	48	0%	63	36.5%	52	25%	-	-	-	NULL
EXTL1	2134	genome.wustl.edu	37	1	26358896	26358896	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004455.2	+1	reviewed	p.L451I	1.000	66	0%	97	24.7%	0	-	probably_damaging(0.994)	deleterious(0.03)	deleterious(0.817)	HMMPfam_Glyco_transf_64,superfamily_SSF53448
CNKSR1	10256	genome.wustl.edu	37	1	26508390	26508390	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006314.2	+1	reviewed	p.E145D	1.000	126	0%	258	29.1%	17	64.7%	benign(0.013)	tolerated(0.06)	neutral(0.323)	HMMPfam_CRIC_ras_sig
SH3BGRL3	83442	genome.wustl.edu	37	1	26607301	26607301	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031286.3	+1	validated	p.R32C	1.000	40	0%	91	23.1%	450	26.2%	benign(0.02)	tolerated(0.12)	neutral(0.262)	HMMPfam_SH3BGR,superfamily_Thioredoxin-like
AIM1L	55057	genome.wustl.edu	37	1	26664037	26664037	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000308182	-1	known	p.S277L	0.147	47	0%	80	37.5%	0	-	-	-	-	HMMPfam_Crystall,HMMSmart_SM00247,superfamily_gamma-Crystallin-like
AIM1L	55057	genome.wustl.edu	37	1	26664854	26664854	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000308182	-1	known	p.S218N	1.000	96	0%	202	30.7%	0	-	-	-	-	HMMPfam_Crystall,HMMSmart_SM00247,superfamily_gamma-Crystallin-like
ZNF683	257101	genome.wustl.edu	37	1	26691475	26691475	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114759.1	-1	validated	p.L188I	0.000	172	0%	464	35.1%	1	0%	possibly_damaging(0.602)	tolerated(0.5)	neutral(0.218)	NULL
DHDDS	79947	genome.wustl.edu	37	1	26786593	26786593	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000416052	+1	known	p.R118*	1.000	184	0%	363	12.1%	15	6.6%	-	-	-	HMMPfam_Prenyltransf,superfamily_Undecaprenyl diphosphate synthase
HMGN2	3151	genome.wustl.edu	37	1	26800601	26800601	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005517.3	+1	validated	p.P39H	1.000	227	0%	366	28.4%	150	36%	probably_damaging(0.978)	deleterious(0.02)	deleterious(0.803)	HMMPfam_HMG14_17,HMMSmart_HMG17
ARID1A	8289	genome.wustl.edu	37	1	27092752	27092752	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006015.4	+1	reviewed	p.G925*	1.000	153	0%	271	33.6%	13	7.6%	-	-	-	NULL
ARID1A	8289	genome.wustl.edu	37	1	27105527	27105527	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006015.4	+1	reviewed	p.L1713P	1.000	79	0%	156	41.7%	23	26%	possibly_damaging(0.868)	deleterious(0)	deleterious(0.782)	NULL
ARID1A	8289	genome.wustl.edu	37	1	27105679	27105679	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006015.4	+1	reviewed	p.E1764*	0.129	60	0%	126	37.3%	22	81.8%	-	-	-	NULL
FAM46B	115572	genome.wustl.edu	37	1	27332961	27332961	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052943.3	-1	validated	p.Y251C	0.999	35	0%	79	32.9%	3	66.6%	probably_damaging(0.97)	deleterious(0)	deleterious(0.857)	HMMPfam_DUF1693
SLC9A1	6548	genome.wustl.edu	37	1	27440746	27440746	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000374084	-1	known	p.R129C	0.995	40	0%	78	19.2%	16	25%	unknown(0)	-	-	NULL
WDTC1	23038	genome.wustl.edu	37	1	27631648	27631648	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015023.3	+1	validated	p.I599	0.206	46	0%	70	27.1%	63	46%	unknown(0)	deleterious(0)	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
TMEM222	84065	genome.wustl.edu	37	1	27657274	27657274	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000464813	+1	known	p.R59C	0.324	151	0%	226	34.5%	32	15.6%	-	-	-	HMMPfam_DUF778
ATPIF1	93974	genome.wustl.edu	37	1	28564487	28564487	+	Nonstop_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016311.3	+1	reviewed	p.*107E	1.000	77	0%	165	37%	447	37.5%	-	-	-	NULL
PHACTR4	65979	genome.wustl.edu	37	1	28800594	28800594	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023923.3	+1	reviewed	p.S461N	0.034	87	0%	154	34.4%	10	20%	benign(0)	tolerated(0.5)	neutral(0.010)	NULL
EPB41	2035	genome.wustl.edu	37	1	29314380	29314380	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203343.2	+1	reviewed	p.S144Y	0.972	70	0%	150	33.3%	1	0%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
SRSF4	6429	genome.wustl.edu	37	1	29476636	29476636	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005626.4	-1	reviewed	p.S216Y	1.000	229	0%	331	34.7%	39	23%	unknown(0)	tolerated(0.07)	-	NULL
PTPRU	10076	genome.wustl.edu	37	1	29638248	29638248	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005704.3	+1	reviewed	p.V1027M	0.998	67	0%	122	31.1%	65	43%	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II
LAPTM5	7805	genome.wustl.edu	37	1	31210514	31210514	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006762.2	-1	reviewed	p.H181Q	0.000	146	0%	283	34.6%	87	0%	benign(0.001)	tolerated(0.35)	neutral(0.021)	HMMPfam_Mtp
LAPTM5	7805	genome.wustl.edu	37	1	31215370	31215370	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006762.2	-1	reviewed	p.E38D	1.000	78	0%	92	35.9%	59	0%	probably_damaging(0.992)	deleterious(0.02)	deleterious(0.831)	HMMPfam_Mtp
COL16A1	1307	genome.wustl.edu	37	1	32163669	32163669	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001856.3	-1	reviewed	p.D165E	1.000	27	0%	58	32.8%	12	0%	unknown(0)	deleterious(0)	-	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases
BAI2	576	genome.wustl.edu	37	1	32193133	32193133	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001703.2	-1	reviewed	p.S1549Y	0.992	48	0%	54	31.5%	7	28.5%	possibly_damaging(0.855)	deleterious(0.02)	deleterious(0.713)	NULL
SPOCD1	90853	genome.wustl.edu	37	1	32256606	32256606	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144569.4	-1	provisional	p.I1083	0.000	19	0%	25	48%	10	0%	-	-	-	NULL
SPOCD1	90853	genome.wustl.edu	37	1	32256690	32256690	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000452755	-1	known	p.E340K	0.000	24	0%	21	33.3%	7	0%	benign(0.014)	-	-	HMMPfam_SPOC
KHDRBS1	10657	genome.wustl.edu	37	1	32498920	32498920	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006559.1	+1	provisional	p.K252N	1.000	133	0%	247	38.5%	107	39.2%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMSmart_SM00322,superfamily_Eukaryotic type KH-domain (KH-domain type I)
RBBP4	5928	genome.wustl.edu	37	1	33134712	33134712	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005610.2	+1	reviewed	p.A247V	1.000	76	0%	200	36%	159	43.3%	possibly_damaging(0.896)	deleterious(0)	deleterious(0.798)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
YARS	8565	genome.wustl.edu	37	1	33252604	33252604	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003680.3	-1	reviewed	p.G253*	1.000	122	0%	313	33.2%	53	3.7%	-	-	-	HMMPfam_tRNA-synt_1b,superfamily_Nucleotidylyl transferase
S100PBP	64766	genome.wustl.edu	37	1	33291759	33291759	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022753.2	+1	validated	p.D20G	0.765	147	0%	317	33.1%	4	0%	possibly_damaging(0.903)	deleterious(0.05)	deleterious(0.704)	NULL
S100PBP	64766	genome.wustl.edu	37	1	33292123	33292123	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022753.2	+1	validated	p.K141N	0.995	32	0%	57	38.6%	2	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
HPCA	3208	genome.wustl.edu	37	1	33354552	33354552	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002143.2	+1	reviewed	p.E18A	1.000	73	0%	78	42.3%	0	-	benign(0)	tolerated(0.18)	neutral(0.056)	superfamily_EF-hand
PHC2	1912	genome.wustl.edu	37	1	33799730	33799730	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198040.2	-1	reviewed	p.I573	1.000	143	0%	172	37.2%	35	17.1%	-	-	-	NULL
PHC2	1912	genome.wustl.edu	37	1	33838014	33838014	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198040.2	-1	reviewed	p.T70M	1.000	59	0%	57	26.3%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ZSCAN20	7579	genome.wustl.edu	37	1	33960991	33960991	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145238.3	+1	validated	p.K1016T	0.997	60	0%	95	27.4%	3	33.3%	benign(0.108)	deleterious(0.05)	neutral(0.354)	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZSCAN20	7579	genome.wustl.edu	37	1	33960999	33960999	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145238.3	+1	validated	p.E1019K	0.957	56	0%	89	36%	2	0%	benign(0.004)	deleterious(0.03)	neutral(0.364)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CSMD2	114784	genome.wustl.edu	37	1	34015859	34015859	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052896.3	-1	validated	p.I2801	0.153	61	0%	68	33.8%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD2	114784	genome.wustl.edu	37	1	34033349	34033349	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052896.3	-1	validated	p.P2719T	1.000	140	0%	226	27%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD2	114784	genome.wustl.edu	37	1	34070949	34070949	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052896.3	-1	validated	p.G2157	0.991	168	0%	196	26.5%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD2	114784	genome.wustl.edu	37	1	34112357	34112357	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052896.3	-1	validated	p.F1515L	1.000	146	0%	169	33.7%	2	0%	benign(0.045)	deleterious(0.01)	neutral(0.408)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD2	114784	genome.wustl.edu	37	1	34204922	34204922	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052896.3	-1	validated	p.N689	0.265	45	0%	70	44.3%	0	-	-	-	-	superfamily_Spermadhesin CUB domain,superfamily_Complement control module/SCR domain
CSMD2	114784	genome.wustl.edu	37	1	34276442	34276442	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052896.3	-1	validated	p.R410*	0.991	92	0%	94	39.4%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
C1orf94	84970	genome.wustl.edu	37	1	34643432	34643432	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134734.1	+1	validated	p.Q14H	0.993	33	0%	37	32.4%	0	-	unknown(0)	deleterious(0)	-	NULL
GJB5	2709	genome.wustl.edu	37	1	35223084	35223084	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005268.2	+1	provisional	p.F51	0.394	208	0%	229	38%	1	0%	-	-	-	HMMPfam_Connexin,HMMSmart_CNX
GJB4	127534	genome.wustl.edu	37	1	35227059	35227059	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153212.2	+1	reviewed	p.F68L	1.000	125	0%	198	36.9%	0	-	possibly_damaging(0.894)	tolerated(0.11)	deleterious(0.623)	HMMPfam_Connexin,HMMSmart_SM00037
LOC100287174	100287174	genome.wustl.edu	37	1	35250612	35250612	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342072.1	-1	model	p.E208K	1.000	246	0%	410	33.7%	1	0%	-	-	-	NULL
C1orf212	113444	genome.wustl.edu	37	1	35320903	35320903	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138428.5	-1	validated	p.E127*	0.051	103	0%	157	35%	73	27.3%	-	-	-	NULL
DLGAP3	58512	genome.wustl.edu	37	1	35333186	35333186	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080418.1	-1	provisional	p.L843P	1.000	65	0%	169	27.8%	0	-	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	HMMPfam_GKAP
ZMYM6	9204	genome.wustl.edu	37	1	35476603	35476603	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007167.3	-1	validated	p.S366L	0.991	48	0%	105	29.5%	3	66.6%	probably_damaging(0.989)	deleterious(0.02)	deleterious(0.823)	NULL
SFPQ	6421	genome.wustl.edu	37	1	35656995	35656995	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005066.2	-1	validated	p.E322*	1.000	206	0%	345	29.3%	112	8.9%	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
ZMYM4	9202	genome.wustl.edu	37	1	35852603	35852603	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005095.2	+1	validated	e12-1	1.000	50	0%	71	36.6%	0	-	-	-	-	-
KIAA0319L	79932	genome.wustl.edu	37	1	35925968	35925968	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024874.4	-1	reviewed	p.K455N	1.000	356	0%	407	29.7%	10	40%	probably_damaging(0.999)	tolerated(0.2)	deleterious(0.539)	HMMSmart_SM00089,superfamily_PKD domain
KIAA0319L	79932	genome.wustl.edu	37	1	35932241	35932241	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000431916	-1	known	p.W219*	1.000	176	0%	219	32.4%	7	71.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TFAP2E	339488	genome.wustl.edu	37	1	36060209	36060209	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178548.3	+1	validated	p.L421I	1.000	103	0%	147	32%	0	-	benign(0.053)	tolerated(0.23)	neutral(0.045)	HMMPfam_TF_AP-2
CLSPN	63967	genome.wustl.edu	37	1	36230882	36230882	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022111.2	-1	reviewed	p.A24T	0.369	179	0%	337	25.5%	2	50%	possibly_damaging(0.507)	tolerated(0.34)	neutral(0.193)	NULL
EIF2C4	192670	genome.wustl.edu	37	1	36291652	36291652	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017629.2	+1	reviewed	p.E251*	1.000	102	0%	316	26.9%	3	0%	-	-	-	HMMPfam_PAZ,superfamily_PAZ domain
EIF2C3	192669	genome.wustl.edu	37	1	36439003	36439003	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024852.2	+1	reviewed	p.F183L	1.000	113	0%	163	36.8%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF1785
MRPS15	64960	genome.wustl.edu	37	1	36921490	36921490	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031280.3	-1	reviewed	p.R225	0.008	225	0%	514	28.4%	168	49.4%	-	-	-	NULL
MRPS15	64960	genome.wustl.edu	37	1	36927691	36927691	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031280.3	-1	reviewed	p.E83D	0.996	195	0%	430	35.6%	158	33.5%	benign(0.016)	tolerated(0.15)	neutral(0.241)	NULL
CSF3R	1441	genome.wustl.edu	37	1	36933802	36933802	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_156039.2	-1	reviewed	p.L533	1.000	47	0%	166	34.9%	2	0%	-	-	-	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
CSF3R	1441	genome.wustl.edu	37	1	36934791	36934791	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_156039.2	-1	reviewed	p.P514	0.225	214	0%	456	32.7%	1	0%	-	-	-	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
GRIK3	2899	genome.wustl.edu	37	1	37315979	37315979	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000831.3	-1	reviewed	p.A420V	0.993	124	0%	141	23.4%	0	-	benign(0.016)	tolerated(0.51)	neutral(0.009)	NULL
MEAF6	64769	genome.wustl.edu	37	1	37967542	37967542	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022756.4	-1	provisional	p.E132D	1.000	135	0%	229	35.8%	39	56.4%	possibly_damaging(0.942)	tolerated(0.19)	neutral(0.436)	NULL
EPHA10	284656	genome.wustl.edu	37	1	38230678	38230678	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099439.1	-1	validated	p.L21I	0.972	19	0.000	9	0.778	0	-	benign(0.35)	tolerated(0.47)	neutral(0.122)	NULL
MTF1	4520	genome.wustl.edu	37	1	38305664	38305664	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005955.2	-1	reviewed	p.R192Q	1.000	158	0%	268	40.7%	4	25%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SF3A3	10946	genome.wustl.edu	37	1	38444717	38444717	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006802.2	-1	reviewed	p.S257Y	1.000	68	0%	182	30.2%	33	24.2%	probably_damaging(0.99)	tolerated(0.18)	deleterious(0.497)	NULL
GJA9	81025	genome.wustl.edu	37	1	39340512	39340512	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030772.3	-1	provisional	p.R420Q	0.001	219	0%	369	37.7%	1	100%	possibly_damaging(0.802)	deleterious(0)	deleterious(0.746)	NULL
RHBDL2	54933	genome.wustl.edu	37	1	39377088	39377088	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017821.3	-1	reviewed	p.G138	0.999	93	0%	242	34.3%	0	-	-	-	-	HMMPfam_Rhomboid
RHBDL2	54933	genome.wustl.edu	37	1	39384828	39384828	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017821.3	-1	reviewed	p.E19D	0.000	271	0%	530	30.8%	0	-	benign(0.002)	tolerated(0.13)	neutral(0.253)	NULL
NDUFS5	4725	genome.wustl.edu	37	1	39494585	39494585	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004552.2	+1	reviewed	p.F63	0.000	95	0%	263	35%	1133	44.8%	-	-	-	HMMPfam_Ndufs5
MACF1	23499	genome.wustl.edu	37	1	39759288	39759288	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012090.3	+1	reviewed	p.F722L	1.000	126	0%	202	27.2%	0	-	possibly_damaging(0.756)	tolerated(0.08)	deleterious(0.579)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
MACF1	23499	genome.wustl.edu	37	1	39776600	39776600	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000372925	+1	known	p.S205P	1.000	106	0%	159	39.6%	0	-	-	-	-	superfamily_Spectrin repeat
MACF1	23499	genome.wustl.edu	37	1	39781299	39781299	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012090.3	+1	reviewed	p.E1134*	1.000	170	0%	245	33.9%	0	-	-	-	-	superfamily_Spectrin repeat
MACF1	23499	genome.wustl.edu	37	1	39788286	39788286	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012090.3	+1	reviewed	p.E1351*	1.000	134	0%	112	31.2%	2	50%	-	-	-	HMMSmart_SM00150,superfamily_Spectrin repeat
MACF1	23499	genome.wustl.edu	37	1	39797351	39797351	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033044.2	+1	reviewed	p.K137N	1.000	135	0%	146	26%	0	-	probably_damaging(0.998)	-	-	HMMSmart_PLEC,superfamily_SSF75399
MACF1	23499	genome.wustl.edu	37	1	39799007	39799007	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033044.2	+1	reviewed	p.I689	0.000	109	0%	182	33%	0	-	-	-	-	NULL
MACF1	23499	genome.wustl.edu	37	1	39800941	39800941	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033044.2	+1	reviewed	p.L1334R	0.000	79	0%	117	26.5%	2	0%	possibly_damaging(0.509)	-	-	NULL
MACF1	23499	genome.wustl.edu	37	1	39801886	39801886	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033044.2	+1	reviewed	p.D1649G	0.000	79	0%	138	39.9%	2	0%	benign(0.006)	-	-	NULL
MACF1	23499	genome.wustl.edu	37	1	39823377	39823377	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033044.2	+1	reviewed	p.R2359W	0.982	133	0%	226	35.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
MACF1	23499	genome.wustl.edu	37	1	39853232	39853232	+	Nonsense_Mutation	SNP	G	G	T	rs617422		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000372925	+1	known	p.E1957*	1.000	60	0%	100	29%	0	-	benign(0.002)	tolerated(0.14)	neutral(0.249)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
KIAA0754	643314	genome.wustl.edu	37	1	39877677	39877677	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015038.1	+1	predicted	p.R580	0.130	110	0%	177	36.2%	2	50%	-	-	-	NULL
MACF1	23499	genome.wustl.edu	37	1	39893907	39893907	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033044.2	+1	reviewed	p.F4024S	1.000	161	0%	195	32.8%	5	20%	benign(0.001)	tolerated(0.62)	neutral(0.004)	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
HEYL	26508	genome.wustl.edu	37	1	40092513	40092513	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014571.3	-1	reviewed	p.R218Q	0.374	66	0%	157	36.3%	9	0%	probably_damaging(0.999)	tolerated(0.19)	deleterious(0.540)	NULL
HEYL	26508	genome.wustl.edu	37	1	40095920	40095920	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014571.3	-1	reviewed	p.L98I	1.000	151	0%	237	33.3%	5	0%	probably_damaging(0.993)	deleterious(0.03)	deleterious(0.815)	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic
NT5C1A	84618	genome.wustl.edu	37	1	40124965	40124965	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032526.1	-1	provisional	p.A312V	1.000	63	0%	79	34.2%	0	-	probably_damaging(1)	tolerated(1)	deleterious(0.500)	HMMPfam_5-nucleotidase
MFSD2A	84879	genome.wustl.edu	37	1	40431188	40431188	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136493.1	+1	validated	p.E188K	1.000	142	0%	200	31.5%	17	47%	possibly_damaging(0.659)	deleterious(0.02)	deleterious(0.616)	superfamily_MFS general substrate transporter
CAP1	10487	genome.wustl.edu	37	1	40531914	40531914	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105530.1	+1	reviewed	p.K184N	1.000	127	0%	200	29%	71	45%	benign(0.083)	deleterious(0.04)	neutral(0.355)	HMMPfam_CAP_N,superfamily_N-terminal domain of adenylylcyclase associated protein CAP
RLF	6018	genome.wustl.edu	37	1	40668269	40668269	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012421.3	+1	validated	p.E265*	1.000	92	0%	255	42.4%	1	0%	-	-	-	NULL
RLF	6018	genome.wustl.edu	37	1	40701728	40701728	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012421.3	+1	validated	p.R452*	1.000	83	0%	96	38.5%	3	66.6%	-	-	-	NULL
RLF	6018	genome.wustl.edu	37	1	40704423	40704423	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012421.3	+1	validated	p.R1350I	1.000	82	0%	180	31.1%	8	62.5%	probably_damaging(0.99)	tolerated(0.07)	deleterious(0.760)	NULL
ZNF643	65243	genome.wustl.edu	37	1	40922962	40922962	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000431552	+1	known	p.F27L	0.349	102	0%	156	25.6%	0	-	benign(0.003)	tolerated(0.65)	neutral(0.003)	NULL
ZNF643	65243	genome.wustl.edu	37	1	40928264	40928264	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000411995	+1	known	p.E176*	0.151	88	0%	164	32.3%	2	100%	benign(0.026)	tolerated(0.13)	neutral(0.254)	NULL
ZNF643	65243	genome.wustl.edu	37	1	40928636	40928636	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000411995	+1	known	p.E300*	1.000	106	0%	170	28.8%	2	50%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF642	339559	genome.wustl.edu	37	1	40961342	40961342	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198494.2	+1	validated	p.L398F	0.999	76	0%	126	33.3%	4	75%	probably_damaging(0.997)	tolerated(0.11)	deleterious(0.738)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF642	339559	genome.wustl.edu	37	1	40961575	40961575	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198494.2	+1	validated	p.A475	0.993	81	0%	167	36.5%	5	40%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
LOC100128362	100128362	genome.wustl.edu	37	1	41404035	41404035	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342077.1	-1	model	e5-1	1.000	31	0%	48	35.4%	0	-	-	-	-	-
CTPS	1503	genome.wustl.edu	37	1	41457481	41457481	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001905.2	+1	validated	p.E228D	1.000	118	0%	231	30.3%	9	55.5%	benign(0.001)	tolerated(0.29)	neutral(0.029)	HMMPfam_CTP_synth_N,superfamily_SSF52540
HIVEP3	59269	genome.wustl.edu	37	1	41990470	41990470	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024503.3	-1	validated	p.I1773	1.000	218	0%	303	32.7%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
HIVEP3	59269	genome.wustl.edu	37	1	42045804	42045804	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024503.3	-1	validated	p.D1555	0.945	107	0%	145	30.3%	1	0%	-	-	-	NULL
HIVEP3	59269	genome.wustl.edu	37	1	42047584	42047584	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024503.3	-1	validated	p.P962L	0.336	62	0%	75	29.3%	1	0%	benign(0)	deleterious(0.03)	neutral(0.364)	NULL
HIVEP3	59269	genome.wustl.edu	37	1	42048076	42048076	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024503.3	-1	validated	p.S798Y	1.000	67	0%	60	31.7%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
HIVEP3	59269	genome.wustl.edu	37	1	42050292	42050292	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024503.3	-1	validated	p.F59L	0.979	132	0%	148	33.1%	0	-	probably_damaging(0.971)	tolerated(0.45)	neutral(0.425)	NULL
HIVEP3	59269	genome.wustl.edu	37	1	42050349	42050349	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024503.3	-1	validated	p.S40	0.024	99	0%	106	38.7%	0	-	-	-	-	NULL
FOXJ3	22887	genome.wustl.edu	37	1	42647693	42647693	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014947.3	-1	validated	p.N550H	1.000	118	0.8%	278	33.8%	19	42.1%	probably_damaging(0.965)	deleterious(0.05)	deleterious(0.752)	NULL
CCDC30	728621	genome.wustl.edu	37	1	43032078	43032078	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080850.2	+1	validated	p.R263*	0.978	165	0%	220	29.5%	2	50%	-	-	-	NULL
CCDC30	728621	genome.wustl.edu	37	1	43042696	43042696	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080850.2	+1	validated	p.K287	0.999	114	0%	196	15.3%	3	0%	-	-	-	NULL
WDR65	149465	genome.wustl.edu	37	1	43650971	43650971	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152498.3	+1	validated	p.L305M	0.849	186	0%	292	37.3%	1	0%	possibly_damaging(0.86)	tolerated(0.22)	neutral(0.374)	superfamily_WD40_like
SZT2	23334	genome.wustl.edu	37	1	43896402	43896402	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015284.2	+1	predicted	p.S673	0.000	89	0%	101	45.5%	3	33.3%	-	-	-	NULL
SZT2	23334	genome.wustl.edu	37	1	43911637	43911637	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015284.2	+1	predicted	p.K2067N	0.963	82	0%	132	38.6%	8	12.5%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
HYI	81888	genome.wustl.edu	37	1	43919158	43919158	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000372425	-1	known	p.E70D	0.695	14	0%	17	47.1%	11	18.1%	benign(0.001)	tolerated(0.71)	neutral(0.002)	HMMPfam_AP_endonuc_2,superfamily_Xylose isomerase-like
PTPRF	5792	genome.wustl.edu	37	1	44019259	44019259	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002840.3	+1	reviewed	p.R63H	0.993	93	0%	192	40.1%	68	41.1%	possibly_damaging(0.881)	deleterious(0.03)	deleterious(0.708)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
KDM4A	9682	genome.wustl.edu	37	1	44156616	44156616	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014663.2	+1	reviewed	p.S713L	0.677	141	0%	237	34.6%	44	47.7%	benign(0)	tolerated(0.43)	neutral(0.013)	HMMSmart_SM00249
CCDC24	149473	genome.wustl.edu	37	1	44458225	44458225	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152499.1	+1	provisional	p.S111	1.000	251	0%	472	33.5%	6	33.3%	-	-	-	NULL
SLC6A9	6536	genome.wustl.edu	37	1	44475731	44475731	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201649.2	-1	validated	p.F148L	1.000	106	0%	227	27.8%	3	66.6%	benign(0.002)	tolerated(1)	-	HMMPfam_SNF
DMAP1	55929	genome.wustl.edu	37	1	44684034	44684034	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034023.1	+1	reviewed	p.D149N	1.000	153	0%	219	31.5%	48	27%	benign(0.022)	tolerated(0.4)	neutral(0.017)	NULL
ERI3	79033	genome.wustl.edu	37	1	44818534	44818534	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024066.1	-1	validated	p.E67K	1.000	186	0%	250	30.8%	22	27.2%	unknown(0)	deleterious(0)	-	NULL
RNF220	55182	genome.wustl.edu	37	1	45088413	45088413	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018150.2	+1	validated	e3-1	1.000	125	0%	206	24.8%	0	-	-	-	-	-
TMEM53	79639	genome.wustl.edu	37	1	45120404	45120404	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024587.2	-1	provisional	p.E221K	0.653	83	0%	95	30.5%	10	20%	benign(0)	tolerated(1)	-	HMMPfam_DUF829,superfamily_alpha/beta-Hydrolases
TMEM53	79639	genome.wustl.edu	37	1	45120782	45120782	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024587.2	-1	provisional	p.E95K	1.000	27	0%	56	39.3%	12	50%	probably_damaging(0.999)	tolerated(0.82)	deleterious(0.491)	HMMPfam_DUF829,superfamily_alpha/beta-Hydrolases
KIF2C	11004	genome.wustl.edu	37	1	45220446	45220446	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006845.3	+1	validated	p.W230R	1.000	110	0%	248	32.3%	20	40%	possibly_damaging(0.952)	deleterious(0)	deleterious(0.840)	superfamily_P-loop containing nucleoside triphosphate hydrolases
KIF2C	11004	genome.wustl.edu	37	1	45226020	45226020	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006845.3	+1	validated	p.R479Q	1.000	78	0%	176	32.4%	34	44.1%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
PLK3	1263	genome.wustl.edu	37	1	45270018	45270018	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004073.2	+1	validated	p.Q450H	1.000	87	0%	169	34.9%	15	33.3%	benign(0.039)	tolerated(0.09)	neutral(0.298)	superfamily_Polo-box domain
EIF2B3	8891	genome.wustl.edu	37	1	45363050	45363050	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000439363	-1	known	p.S32L	0.984	159	0%	211	29.4%	11	100%	-	-	-	NULL
EIF2B3	8891	genome.wustl.edu	37	1	45392331	45392331	+	Nonsense_Mutation	SNP	C	C	A	rs112906939		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020365.3	-1	reviewed	p.E179*	1.000	152	0%	209	30.6%	20	10%	-	-	-	superfamily_Nucleotide-diphospho-sugar transferases
HECTD3	79654	genome.wustl.edu	37	1	45469790	45469790	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024602.5	-1	validated	p.F763	0.995	113	0%	187	34.2%	103	45.6%	-	-	-	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
ZSWIM5	57643	genome.wustl.edu	37	1	45485813	45485813	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020883.1	-1	validated	p.R874W	1.000	133	0%	242	31%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TESK2	10420	genome.wustl.edu	37	1	45810676	45810676	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007170.2	-1	reviewed	p.L518F	0.002	128	0%	258	35.3%	4	25%	benign(0.049)	deleterious(0.02)	neutral(0.386)	NULL
PRDX1	5052	genome.wustl.edu	37	1	45980634	45980634	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002574.2	-1	reviewed	p.G98	0.978	169	0%	313	34.8%	1216	46.7%	-	-	-	HMMPfam_AhpC-TSA,superfamily_Thioredoxin-like
IPP	3652	genome.wustl.edu	37	1	46193353	46193353	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005897.2	-1	reviewed	p.R333Q	1.000	151	0%	267	34.5%	6	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
IPP	3652	genome.wustl.edu	37	1	46195400	46195400	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005897.2	-1	reviewed	p.L256M	1.000	116	0%	176	30.1%	2	0%	benign(0.266)	tolerated(0.25)	neutral(0.065)	superfamily_Galactose oxidase central domain
IPP	3652	genome.wustl.edu	37	1	46206708	46206708	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005897.2	-1	reviewed	p.E197*	1.000	195	0%	455	32.3%	4	0%	-	-	-	HMMPfam_BACK
MAST2	23139	genome.wustl.edu	37	1	46498307	46498307	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015112.2	+1	validated	p.R1152C	1.000	85	0%	147	33.3%	35	45.7%	benign(0.167)	tolerated(0.14)	neutral(0.265)	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
POMGNT1	55624	genome.wustl.edu	37	1	46654953	46654953	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017739.3	-1	reviewed	p.E658*	1.000	62	0%	137	38.7%	43	9.3%	-	-	-	NULL
POMGNT1	55624	genome.wustl.edu	37	1	46663532	46663532	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_024332.1	-1	reviewed	NULL	1.000	45	0%	68	44.1%	6	50%	-	-	-	-
RAD54L	8438	genome.wustl.edu	37	1	46724371	46724371	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142548.1	+1	reviewed	p.R75Q	1.000	242	0%	444	29.1%	6	16.6%	possibly_damaging(0.446)	tolerated(0.3)	neutral(0.174)	NULL
DMBX1	127343	genome.wustl.edu	37	1	46976618	46976618	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_147192.2	+1	reviewed	p.K120N	1.000	14	0%	21	28.6%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1
ATPAF1	64756	genome.wustl.edu	37	1	47101579	47101579	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022745.3	-1	reviewed	p.E286*	1.000	159	0%	209	38.3%	35	54.2%	-	-	-	HMMPfam_ATP11
KIAA0494	9813	genome.wustl.edu	37	1	47152468	47152468	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014774.2	-1	validated	p.I354	0.452	527	0.2%	506	29.8%	39	53.8%	-	-	-	NULL
CYP4X1	260293	genome.wustl.edu	37	1	47505191	47505191	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178033.1	+1	reviewed	p.S354P	0.032	97	0%	67	31.3%	32	56.2%	possibly_damaging(0.805)	tolerated(0.08)	deleterious(0.603)	HMMPfam_p450,superfamily_Cytochrome P450
CYP4X1	260293	genome.wustl.edu	37	1	47505193	47505193	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178033.1	+1	reviewed	p.S354	0.111	98	0%	68	33.8%	33	42.4%	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
CYP4Z1	199974	genome.wustl.edu	37	1	47583547	47583547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178134.2	+1	reviewed	p.R487C	0.000	106	0%	122	36.9%	0	-	possibly_damaging(0.899)	deleterious(0)	deleterious(0.800)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP4A22	284541	genome.wustl.edu	37	1	47606581	47606581	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010969.2	+1	reviewed	p.L109M	0.972	154	0%	244	34.4%	0	-	unknown(0)	deleterious(0.01)	-	HMMPfam_p450,superfamily_Cytochrome P450
CYP4A22	284541	genome.wustl.edu	37	1	47610365	47610365	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010969.2	+1	reviewed	p.C347*	1.000	152	0%	220	31.8%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
STIL	6491	genome.wustl.edu	37	1	47717410	47717410	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001048166.1	-1	reviewed	p.N1089H	0.977	141	0%	264	38.3%	12	75%	probably_damaging(0.989)	deleterious(0.04)	deleterious(0.788)	NULL
STIL	6491	genome.wustl.edu	37	1	47728593	47728593	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001048166.1	-1	reviewed	p.K937N	0.880	278	0%	499	35.7%	4	25%	possibly_damaging(0.732)	deleterious(0.01)	deleterious(0.673)	NULL
STIL	6491	genome.wustl.edu	37	1	47746413	47746413	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001048166.1	-1	reviewed	p.D573N	0.319	182	0%	386	36.3%	0	-	benign(0)	tolerated(1)	-	NULL
STIL	6491	genome.wustl.edu	37	1	47767944	47767944	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001048166.1	-1	reviewed	p.S76L	0.001	240	0%	333	28.2%	0	-	benign(0)	tolerated(0.91)	-	NULL
SLC5A9	200010	genome.wustl.edu	37	1	48694826	48694826	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135181.1	+1	validated	p.G131R	0.000	160	0%	151	32.5%	0	-	benign(0.02)	tolerated(0.12)	neutral(0.262)	HMMPfam_SSF
SPATA6	54558	genome.wustl.edu	37	1	48865184	48865184	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019073.1	-1	provisional	p.E207K	1.000	434	0%	276	30.1%	4	50%	probably_damaging(1)	tolerated(0.16)	deleterious(0.559)	NULL
SPATA6	54558	genome.wustl.edu	37	1	48918771	48918771	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019073.1	-1	provisional	p.K28N	1.000	216	0%	219	33.3%	1	0%	probably_damaging(0.996)	tolerated(0.06)	deleterious(0.784)	NULL
AGBL4	84871	genome.wustl.edu	37	1	48999769	48999769	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000334103	-1	known	p.S309Y	0.001	207	0%	227	30.8%	1	100%	unknown(0)	-	-	NULL
AGBL4	84871	genome.wustl.edu	37	1	49056607	49056607	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032785.3	-1	validated	p.M334I	1.000	70	0%	108	37%	0	-	benign(0.067)	tolerated(0.41)	neutral(0.019)	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases
BEND5	79656	genome.wustl.edu	37	1	49202044	49202044	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024603.2	-1	validated	p.T325	0.101	321	0%	363	28.1%	6	33.3%	-	-	-	HMMPfam_BEN
BEND5	79656	genome.wustl.edu	37	1	49227047	49227047	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024603.2	-1	validated	p.D108Y	1.000	384	0%	424	14.6%	1	0%	possibly_damaging(0.822)	deleterious(0.02)	deleterious(0.694)	NULL
AGBL4	84871	genome.wustl.edu	37	1	50317105	50317105	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032785.3	-1	validated	p.K40N	1.000	199	0%	200	36%	1	0%	probably_damaging(0.954)	deleterious(0.02)	deleterious(0.780)	NULL
ELAVL4	1996	genome.wustl.edu	37	1	50572035	50572035	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144775.1	+1	validated	p.V10	1.000	213	0%	231	32%	0	-	-	-	-	NULL
FAF1	11124	genome.wustl.edu	37	1	51121193	51121193	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007051.2	-1	reviewed	p.R222I	1.000	161	0%	258	30.2%	26	53.8%	probably_damaging(0.992)	tolerated(0.08)	deleterious(0.748)	superfamily_Ubiquitin-like
OSBPL9	114883	genome.wustl.edu	37	1	52179732	52179732	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148909.1	+1	reviewed	p.R100Q	1.000	189	0%	234	26.9%	8	25%	probably_damaging(0.999)	tolerated(0.05)	deleterious(0.836)	HMMSmart_PH
NRD1	4898	genome.wustl.edu	37	1	52275032	52275032	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002525.2	-1	validated	p.E717K	0.977	251	0%	272	26.5%	43	51.1%	benign(0.01)	tolerated(0.48)	neutral(0.011)	NULL
RAB3B	5865	genome.wustl.edu	37	1	52399099	52399099	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002867.3	-1	validated	p.K121N	1.000	143	0%	285	29.8%	3	66.6%	probably_damaging(0.995)	tolerated(0.09)	deleterious(0.754)	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540
ZFYVE9	9372	genome.wustl.edu	37	1	52703442	52703442	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004799.2	+1	reviewed	p.R118I	0.992	89	0%	124	37.9%	1	100%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
ZFYVE9	9372	genome.wustl.edu	37	1	52703801	52703801	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004799.2	+1	reviewed	p.A238S	0.002	94	0%	119	26.1%	4	0%	benign(0.001)	deleterious(0.01)	neutral(0.406)	NULL
ZFYVE9	9372	genome.wustl.edu	37	1	52704200	52704200	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004799.2	+1	reviewed	p.E371*	0.992	71	0%	66	31.8%	4	0%	-	-	-	NULL
CC2D1B	200014	genome.wustl.edu	37	1	52823538	52823538	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032449.1	-1	validated	p.K504N	0.997	69	1.4%	98	34.7%	20	55%	possibly_damaging(0.918)	tolerated(0.41)	neutral(0.384)	NULL
ZCCHC11	23318	genome.wustl.edu	37	1	52891167	52891167	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009881.1	-1	validated	p.R1575Q	1.000	107	0%	161	27.3%	18	38.8%	probably_damaging(0.955)	tolerated(0.43)	neutral(0.412)	NULL
ZCCHC11	23318	genome.wustl.edu	37	1	52927392	52927392	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009881.1	-1	validated	p.R1040I	1.000	29	0%	18	50%	0	-	benign(0.055)	deleterious(0.01)	neutral(0.409)	HMMPfam_NTP_transf_2,superfamily_Nucleotidyltransferase
ZCCHC11	23318	genome.wustl.edu	37	1	52930806	52930806	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009881.1	-1	validated	p.G1002V	1.000	184	0%	453	28.9%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_NTP_transf_2,superfamily_Nucleotidyltransferase
ZCCHC11	23318	genome.wustl.edu	37	1	52933862	52933862	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009881.1	-1	validated	p.E986*	1.000	169	0%	219	23.3%	2	100%	-	-	-	HMMPfam_NTP_transf_2,superfamily_Nucleotidyltransferase
ZCCHC11	23318	genome.wustl.edu	37	1	52941151	52941151	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009881.1	-1	validated	p.E694K	1.000	96	0%	160	35.6%	7	28.5%	probably_damaging(0.99)	tolerated(0.07)	deleterious(0.760)	superfamily_PAP/OAS1 substrate-binding domain
ZCCHC11	23318	genome.wustl.edu	37	1	52981592	52981592	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009881.1	-1	validated	p.E285*	1.000	175	0%	252	34.1%	4	25%	-	-	-	NULL
ZYG11B	79699	genome.wustl.edu	37	1	53236766	53236766	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024646.2	+1	validated	p.A91S	1.000	57	0%	110	33.6%	3	66.6%	benign(0.044)	tolerated(0.21)	neutral(0.046)	NULL
ZYG11B	79699	genome.wustl.edu	37	1	53279586	53279586	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024646.2	+1	validated	e12+2	1.000	154	0%	327	34.9%	0	-	-	-	-	-
ZYG11B	79699	genome.wustl.edu	37	1	53287176	53287176	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024646.2	+1	validated	p.H704N	1.000	66	0%	189	35.4%	1	100%	benign(0.021)	tolerated(0.6)	neutral(0.005)	superfamily_ARM repeat
ZYG11A	440590	genome.wustl.edu	37	1	53320281	53320281	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000371528	+1	known	p.L79I	1.000	152	0%	318	35.5%	2	50%	possibly_damaging(0.466)	deleterious(0.02)	deleterious(0.536)	superfamily_RNI-like
SCP2	6342	genome.wustl.edu	37	1	53443986	53443986	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002979.3	+1	reviewed	p.E258*	1.000	215	0%	368	34.8%	5	0%	-	-	-	NULL
SLC1A7	6512	genome.wustl.edu	37	1	53555607	53555607	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006671.4	-1	validated	e9-1	1.000	25	0%	52	25%	0	-	-	-	-	-
TMEM48	55706	genome.wustl.edu	37	1	54284727	54284727	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018087.4	-1	validated	p.R207I	1.000	86	0%	97	34%	6	33.3%	probably_damaging(0.977)	tolerated(0.07)	deleterious(0.738)	HMMPfam_Ndc1_Nup
MRPL37	51253	genome.wustl.edu	37	1	54683871	54683871	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016491.3	+1	reviewed	p.K407N	1.000	213	0%	351	31.6%	212	41%	benign(0.001)	tolerated(0.33)	neutral(0.024)	NULL
SSBP3	23648	genome.wustl.edu	37	1	54870558	54870558	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145716.2	-1	validated	p.Q34H	1.000	69	0%	147	32%	38	39.4%	possibly_damaging(0.908)	deleterious(0)	deleterious(0.806)	HMMSmart_SM00667
FAM151A	338094	genome.wustl.edu	37	1	55075358	55075358	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176782.2	-1	validated	p.I447	0.898	39	0%	55	49.1%	6	66.6%	-	-	-	NULL
HEATR8	374977	genome.wustl.edu	37	1	55148456	55148456	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039464.2	+1	validated	p.V837M	0.760	40	0%	24	33.3%	0	-	probably_damaging(0.961)	deleterious(0.03)	deleterious(0.768)	superfamily_ARM repeat
HEATR8	374977	genome.wustl.edu	37	1	55175854	55175854	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039464.2	+1	validated	p.K1322N	0.998	64	0%	64	21.9%	0	-	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	NULL
USP24	23358	genome.wustl.edu	37	1	55563710	55563710	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015306.2	-1	validated	p.S1674Y	1.000	195	0%	213	31.9%	5	40%	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	HMMPfam_UCH,superfamily_Cysteine proteinases
C1orf168	199920	genome.wustl.edu	37	1	57189315	57189315	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004303.4	-1	validated	p.N640K	0.967	180	0%	61	21.3%	0	-	probably_damaging(0.996)	tolerated(1)	neutral(0.462)	NULL
C8A	731	genome.wustl.edu	37	1	57372354	57372354	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000562.2	+1	reviewed	p.D371Y	0.007	357	0%	367	30.2%	0	-	possibly_damaging(0.91)	deleterious(0.03)	deleterious(0.727)	HMMPfam_MACPF,HMMSmart_MACPF
C8A	731	genome.wustl.edu	37	1	57372448	57372448	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000562.2	+1	reviewed	p.F402C	0.000	312	0%	308	34.1%	0	-	possibly_damaging(0.44)	tolerated(0.2)	neutral(0.193)	HMMPfam_MACPF,HMMSmart_MACPF
C8B	732	genome.wustl.edu	37	1	57431606	57431606	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000066.2	-1	reviewed	p.T6A	0.000	59	0%	75	32%	0	-	benign(0.007)	tolerated(0.29)	neutral(0.029)	NULL
DAB1	1600	genome.wustl.edu	37	1	57481088	57481088	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021080.3	-1	reviewed	p.G304	1.000	25	0%	37	24.3%	0	-	-	-	-	NULL
DAB1	1600	genome.wustl.edu	37	1	57602270	57602270	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021080.3	-1	reviewed	p.K84N	1.000	277	0%	204	31.9%	0	-	possibly_damaging(0.935)	deleterious(0)	deleterious(0.825)	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like
OMA1	115209	genome.wustl.edu	37	1	58971865	58971865	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145243.3	-1	provisional	p.R411K	1.000	171	0%	185	39.5%	8	12.5%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Peptidase_M48
OMA1	115209	genome.wustl.edu	37	1	58999994	58999994	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145243.3	-1	provisional	p.E247*	1.000	127	0%	134	25.4%	0	-	-	-	-	NULL
MYSM1	114803	genome.wustl.edu	37	1	59158571	59158571	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001085487.1	-1	provisional	p.E60D	0.998	341	0%	492	32.1%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
FGGY	55277	genome.wustl.edu	37	1	60073532	60073532	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113411.1	+1	validated	p.V321I	0.993	276	0%	356	32.3%	1	0%	benign(0)	tolerated(0.81)	neutral(0.001)	superfamily_SSF53067
C1orf87	127795	genome.wustl.edu	37	1	60505699	60505699	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152377.1	-1	predicted	p.L213I	1.000	223	0%	179	28.5%	0	-	probably_damaging(0.959)	tolerated(0.2)	neutral(0.452)	superfamily_EF-hand
INADL	10207	genome.wustl.edu	37	1	62330183	62330183	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176877.2	+1	reviewed	p.E905*	0.404	96	0%	185	32.4%	13	30.7%	-	-	-	NULL
INADL	10207	genome.wustl.edu	37	1	62455891	62455891	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176877.2	+1	reviewed	p.E1241G	1.000	81	0%	113	34.5%	8	25%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PDZ,superfamily_PDZ domain-like
L1TD1	54596	genome.wustl.edu	37	1	62676588	62676588	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019079.4	+1	validated	p.E714D	0.309	80	0%	125	24.8%	1	100%	possibly_damaging(0.945)	tolerated(0.1)	deleterious(0.676)	HMMPfam_Transposase_22
L1TD1	54596	genome.wustl.edu	37	1	62676630	62676630	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019079.4	+1	validated	p.N728K	0.997	79	0%	126	14.3%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_Transposase_22
L1TD1	54596	genome.wustl.edu	37	1	62676790	62676790	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019079.4	+1	validated	p.E782*	0.004	48	0%	88	33%	0	-	-	-	-	HMMPfam_Transposase_22
DOCK7	85440	genome.wustl.edu	37	1	62962045	62962045	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033407.2	-1	validated	p.D1599Y	1.000	163	0%	173	31.2%	8	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ANGPTL3	27329	genome.wustl.edu	37	1	63063483	63063483	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014495.2	+1	reviewed	p.F82	1.000	147	0%	87	42.5%	0	-	-	-	-	NULL
ANGPTL3	27329	genome.wustl.edu	37	1	63069785	63069785	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014495.2	+1	reviewed	p.T359	0.000	166	0%	121	37.2%	0	-	-	-	-	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like
ATG4C	84938	genome.wustl.edu	37	1	63270903	63270903	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032852.2	+1	reviewed	p.K46T	1.000	121	0%	131	32.8%	4	50%	possibly_damaging(0.808)	tolerated(0.21)	neutral(0.348)	NULL
ATG4C	84938	genome.wustl.edu	37	1	63282317	63282317	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032852.2	+1	reviewed	p.E78*	1.000	92	0%	97	36.1%	3	0%	-	-	-	HMMPfam_Peptidase_C54
ATG4C	84938	genome.wustl.edu	37	1	63284765	63284765	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032852.2	+1	reviewed	p.E162*	1.000	146	0%	124	25.8%	3	0%	-	-	-	HMMPfam_Peptidase_C54
FOXD3	27022	genome.wustl.edu	37	1	63789106	63789106	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012183.2	+1	reviewed	p.S126L	0.448	15	0%	10	40%	1	0%	unknown(0)	deleterious(0.04)	-	NULL
ALG6	29929	genome.wustl.edu	37	1	63862226	63862226	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013339.3	+1	reviewed	p.R42I	1.000	275	0%	490	34.5%	8	62.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Alg6_Alg8
EFCAB7	84455	genome.wustl.edu	37	1	63991311	63991311	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032437.2	+1	validated	p.R23Q	0.996	83	1.2%	109	22.9%	2	0%	benign(0)	tolerated(0.43)	neutral(0.013)	NULL
EFCAB7	84455	genome.wustl.edu	37	1	63997509	63997509	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032437.2	+1	validated	p.R69I	1.000	122	0%	113	27.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_EF-hand
EFCAB7	84455	genome.wustl.edu	37	1	63997643	63997643	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032437.2	+1	validated	p.L114V	0.999	98	0%	102	36.3%	0	-	benign(0.052)	tolerated(0.6)	neutral(0.007)	HMMSmart_SM00054,superfamily_EF-hand
PGM1	5236	genome.wustl.edu	37	1	64095098	64095098	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002633.2	+1	reviewed	p.I83	0.994	271	0%	263	36.9%	38	39.4%	-	-	-	HMMPfam_PGM_PMM_I,superfamily_Phosphoglucomutase first 3 domains
RAVER2	55225	genome.wustl.edu	37	1	65270786	65270786	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018211.3	+1	validated	p.K457T	0.998	103	0%	173	33.5%	9	77.7%	benign(0.01)	tolerated(0.72)	neutral(0.002)	NULL
AK4	205	genome.wustl.edu	37	1	65691745	65691745	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005353.1	+1	reviewed	e5-1	1.000	174	0%	317	28.7%	1	100%	-	-	-	-
DNAJC6	9829	genome.wustl.edu	37	1	65831572	65831572	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014787.2	+1	validated	p.T60A	1.000	412	0.5%	365	37.8%	3	66.6%	benign(0.43)	tolerated(1)	neutral(0.140)	NULL
DNAJC6	9829	genome.wustl.edu	37	1	65851417	65851417	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014787.2	+1	validated	p.L218I	1.000	167	0%	189	40.7%	0	-	possibly_damaging(0.836)	tolerated(0.69)	neutral(0.322)	superfamily_(Phosphotyrosine protein) phosphatases II
DNAJC6	9829	genome.wustl.edu	37	1	65855267	65855267	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014787.2	+1	validated	p.R418	1.000	317	0%	363	34.7%	1	0%	-	-	-	NULL
PDE4B	5142	genome.wustl.edu	37	1	66833737	66833737	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037341.1	+1	reviewed	p.D551N	1.000	152	0%	128	31.2%	1	0%	probably_damaging(0.986)	tolerated(0.08)	deleterious(0.734)	HMMPfam_PDEase_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like
SGIP1	84251	genome.wustl.edu	37	1	67000051	67000051	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032291.2	+1	validated	p.G4*	1.000	247	0%	384	31%	5	0%	-	-	-	NULL
SGIP1	84251	genome.wustl.edu	37	1	67194969	67194969	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032291.2	+1	validated	p.E589*	1.000	290	0%	271	38.4%	5	0%	-	-	-	HMMPfam_SAFF
WDR78	79819	genome.wustl.edu	37	1	67337180	67337180	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024763.4	-1	validated	p.K271N	0.000	319	0%	319	29.5%	6	33.3%	benign(0.156)	tolerated(0.42)	neutral(0.028)	NULL
C1orf141	400757	genome.wustl.edu	37	1	67558934	67558934	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013674.1	-1	predicted	p.Q319H	0.088	145	0%	134	32.8%	0	-	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
IL12RB2	3595	genome.wustl.edu	37	1	67796448	67796448	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001559.2	+1	reviewed	p.W305G	0.979	145	0%	238	36.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_fn3,superfamily_Fibronectin type III
IL12RB2	3595	genome.wustl.edu	37	1	67816586	67816586	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001559.2	+1	reviewed	p.L358I	1.000	97	0%	143	35.7%	0	-	possibly_damaging(0.827)	tolerated(0.15)	deleterious(0.555)	superfamily_Fibronectin type III
SERBP1	26135	genome.wustl.edu	37	1	67895755	67895755	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001018067.1	-1	validated	p.D77Y	1.000	42	0%	36	33.3%	83	38.5%	possibly_damaging(0.881)	deleterious(0)	deleterious(0.788)	NULL
WLS	79971	genome.wustl.edu	37	1	68592013	68592013	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024911.5	-1	validated	p.L508	0.987	143	0%	230	41.3%	178	44.3%	-	-	-	NULL
RPE65	6121	genome.wustl.edu	37	1	68912507	68912507	+	Missense_Mutation	SNP	C	C	T	rs61751282		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000329.2	-1	reviewed	p.R44Q	1.000	122	0%	183	30.6%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RPE65
LRRC7	57554	genome.wustl.edu	37	1	70291506	70291506	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020794.2	+1	validated	p.S128Y	1.000	205	0%	138	28.3%	0	-	benign(0.372)	deleterious(0)	deleterious(0.563)	superfamily_L domain-like
LRRC7	57554	genome.wustl.edu	37	1	70484449	70484449	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020794.2	+1	validated	p.K418	1.000	225	0%	274	27.4%	0	-	-	-	-	superfamily_RNI-like
LRRC7	57554	genome.wustl.edu	37	1	70504345	70504345	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020794.2	+1	validated	p.V908	1.000	52	0%	94	29.8%	0	-	-	-	-	NULL
LRRC40	55631	genome.wustl.edu	37	1	70639322	70639322	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017768.4	-1	validated	p.R350*	1.000	130	0%	97	19.6%	2	50%	-	-	-	NULL
CTH	1491	genome.wustl.edu	37	1	70899534	70899534	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001902.4	+1	reviewed	p.E301*	1.000	163	0%	246	31.7%	7	0%	-	-	-	HMMPfam_Cys_Met_Meta_PP,superfamily_PLP-dependent transferases
PTGER3	5733	genome.wustl.edu	37	1	71477935	71477935	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198715.2	-1	reviewed	p.I377S	0.998	109	0%	126	31%	0	-	unknown(0)	deleterious(0.01)	-	superfamily_SSF81321
ZRANB2	9406	genome.wustl.edu	37	1	71534967	71534967	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203350.1	-1	validated	p.S254	1.000	107	0%	109	28.4%	45	42.2%	-	-	-	NULL
ZRANB2	9406	genome.wustl.edu	37	1	71544350	71544350	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203350.1	-1	validated	p.R33Q	1.000	131	0%	121	33.9%	19	36.8%	possibly_damaging(0.885)	deleterious(0.05)	deleterious(0.692)	HMMPfam_zf-RanBP,HMMSmart_SM00547,PatternScan_ZF_RANBP2_1,superfamily_Znf265 first zinc-finger domain
LRRIQ3	127255	genome.wustl.edu	37	1	74492646	74492646	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105659.1	-1	provisional	p.E576*	0.483	167	0%	70	35.7%	0	-	-	-	-	NULL
LRRIQ3	127255	genome.wustl.edu	37	1	74507362	74507362	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105659.1	-1	provisional	p.R418Q	0.000	291	0%	265	35.8%	0	-	benign(0)	tolerated(0.41)	neutral(0.015)	NULL
TNNI3K	51086	genome.wustl.edu	37	1	74716373	74716373	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001112808.1	+1	validated	p.R186*	0.962	325	0%	339	22.4%	0	-	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
C1orf173	127254	genome.wustl.edu	37	1	75038981	75038981	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002912.4	-1	validated	p.H805Y	0.000	246	0%	220	30.5%	0	-	benign(0.202)	deleterious(0.02)	neutral(0.403)	NULL
C1orf173	127254	genome.wustl.edu	37	1	75107025	75107025	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002912.4	-1	validated	p.P145L	0.984	165	0%	114	29.8%	0	-	benign(0.002)	deleterious(0.01)	neutral(0.406)	NULL
LHX8	431707	genome.wustl.edu	37	1	75606709	75606709	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001933.1	+1	validated	p.S103C	1.000	191	0%	172	35.5%	2	0%	probably_damaging(0.999)	tolerated(0.4)	deleterious(0.506)	HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
LHX8	431707	genome.wustl.edu	37	1	75609017	75609017	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001933.1	+1	validated	p.E202*	1.000	92	0%	82	32.9%	0	-	-	-	-	superfamily_Glucocorticoid receptor-like (DNA-binding domain)
LHX8	431707	genome.wustl.edu	37	1	75622730	75622730	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001933.1	+1	validated	p.T321	0.858	294	0%	393	29.3%	0	-	-	-	-	NULL
SLC44A5	204962	genome.wustl.edu	37	1	75680309	75680309	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152697.4	-1	validated	p.L595M	0.980	216	0%	185	20.5%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_DUF580
SLC44A5	204962	genome.wustl.edu	37	1	75684965	75684965	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152697.4	-1	validated	p.E415*	1.000	184	0%	157	25.5%	0	-	-	-	-	HMMPfam_DUF580
MSH4	4438	genome.wustl.edu	37	1	76288153	76288153	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002440.2	+1	validated	p.R350Q	1.000	107	0%	153	37.3%	0	-	probably_damaging(0.995)	deleterious(0.05)	deleterious(0.803)	HMMPfam_MutS_III,HMMSmart_MUTSd,superfamily_DNA_repair_MutS_domIII
MSH4	4438	genome.wustl.edu	37	1	76343991	76343991	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002440.2	+1	validated	p.D510Y	1.000	156	0%	115	21.7%	0	-	possibly_damaging(0.87)	deleterious(0.03)	deleterious(0.703)	HMMPfam_MutS_III,HMMSmart_MUTSd,superfamily_DNA_repair_MutS_domIII,HMMPfam_MutS_IV
MSH4	4438	genome.wustl.edu	37	1	76345754	76345754	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002440.2	+1	validated	p.S566Y	1.000	252	0%	99	23.2%	0	-	benign(0.375)	tolerated(1)	neutral(0.119)	HMMPfam_MutS_III,HMMSmart_MUTSd,superfamily_DNA_repair_MutS_domIII,HMMPfam_MutS_IV
MSH4	4438	genome.wustl.edu	37	1	76349314	76349314	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002440.2	+1	validated	p.E639*	1.000	139	0%	82	30.5%	0	-	-	-	-	HMMPfam_MutS_V,HMMSmart_MUTSd,superfamily_SSF52540
MSH4	4438	genome.wustl.edu	37	1	76349420	76349420	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002440.2	+1	validated	p.N674T	1.000	251	0%	223	32.3%	0	-	probably_damaging(1)	tolerated(0.89)	deleterious(0.500)	HMMPfam_MutS_V,HMMSmart_MUTSac,superfamily_SSF52540
MSH4	4438	genome.wustl.edu	37	1	76354969	76354969	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002440.2	+1	validated	p.R714K	1.000	130	0%	108	26.9%	0	-	benign(0.078)	tolerated(1)	neutral(0.005)	HMMPfam_MutS_V,HMMSmart_MUTSac,superfamily_SSF52540
AK5	26289	genome.wustl.edu	37	1	77763399	77763399	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174858.1	+1	reviewed	p.E191*	1.000	162	0%	205	29.8%	0	-	-	-	-	HMMPfam_ADK,superfamily_P-loop containing nucleoside triphosphate hydrolases
AK5	26289	genome.wustl.edu	37	1	77987619	77987619	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174858.1	+1	reviewed	p.F473	0.970	79	0%	124	26.6%	0	-	-	-	-	HMMPfam_ADK,superfamily_P-loop containing nucleoside triphosphate hydrolases
ZZZ3	26009	genome.wustl.edu	37	1	78098928	78098928	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015534.4	-1	provisional	p.E38*	1.000	175	0%	187	27.3%	1	0%	-	-	-	NULL
USP33	23032	genome.wustl.edu	37	1	78194081	78194081	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015017.3	-1	validated	p.N376T	0.972	209	0%	256	31.6%	11	27.2%	benign(0)	tolerated(0.72)	neutral(0.002)	HMMPfam_UCH,superfamily_Cysteine proteinases
USP33	23032	genome.wustl.edu	37	1	78205036	78205036	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015017.3	-1	validated	p.E120*	1.000	276	0.4%	512	32.2%	3	0%	-	-	-	HMMPfam_zf-UBP
NEXN	91624	genome.wustl.edu	37	1	78395036	78395036	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000342754	+1	known	p.K200R	0.000	135	0%	240	28.3%	0	-	-	-	-	NULL
NEXN	91624	genome.wustl.edu	37	1	78401688	78401688	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144573.3	+1	reviewed	p.D478N	1.000	122	0%	221	22.6%	7	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
FUBP1	8880	genome.wustl.edu	37	1	78428511	78428511	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003902.3	-1	reviewed	p.R430C	1.000	283	0%	296	26%	79	41.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
GIPC2	54810	genome.wustl.edu	37	1	78601341	78601341	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017655.4	+1	validated	p.E288K	0.995	191	0.5%	213	26.3%	2	0%	possibly_damaging(0.811)	tolerated(0.57)	neutral(0.311)	NULL
PTGFR	5737	genome.wustl.edu	37	1	78963588	78963588	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039585.1	+1	reviewed	p.E276D	0.549	244	0%	202	19.3%	0	-	benign(0)	tolerated(0.43)	neutral(0.013)	HMMPfam_7tm_1
ELTD1	64123	genome.wustl.edu	37	1	79392743	79392743	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022159.3	-1	validated	p.S304I	0.966	110	0%	60	28.3%	2	0%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
ELTD1	64123	genome.wustl.edu	37	1	79403923	79403923	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022159.3	-1	validated	p.V146	0.998	147	0%	143	41.3%	1	0%	-	-	-	NULL
LPHN2	23266	genome.wustl.edu	37	1	82402422	82402422	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012302.2	+1	reviewed	p.R100*	1.000	303	0.7%	242	26.4%	6	50%	-	-	-	HMMPfam_Gal_Lectin
LPHN2	23266	genome.wustl.edu	37	1	82409144	82409144	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012302.2	+1	reviewed	p.R297*	1.000	177	0%	146	39.7%	4	25%	-	-	-	HMMPfam_OLF,HMMSmart_SM00284
PRKACB	5567	genome.wustl.edu	37	1	84647974	84647974	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182948.2	+1	reviewed	p.E114A	1.000	188	0%	200	22%	0	-	benign(0.002)	tolerated(0.17)	neutral(0.059)	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
SSX2IP	117178	genome.wustl.edu	37	1	85127967	85127967	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014021.3	-1	reviewed	p.L281I	1.000	401	0%	316	30.7%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LPAR3	23566	genome.wustl.edu	37	1	85279658	85279658	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012152.2	-1	reviewed	p.F311	0.286	147	0%	169	34.3%	3	33.3%	-	-	-	superfamily_SSF81321
LPAR3	23566	genome.wustl.edu	37	1	85331573	85331573	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012152.2	-1	reviewed	p.F77L	1.000	109	0%	182	28%	1	0%	possibly_damaging(0.946)	tolerated(1)	neutral(0.390)	HMMPfam_7tm_1,superfamily_SSF81321
MCOLN2	255231	genome.wustl.edu	37	1	85403521	85403521	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153259.2	-1	reviewed	p.L418I	0.983	151	0%	260	36.5%	0	-	benign(0.135)	tolerated(0.51)	neutral(0.020)	HMMPfam_Ion_trans
MCOLN2	255231	genome.wustl.edu	37	1	85412741	85412741	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153259.2	-1	reviewed	p.C274	0.999	372	0%	466	33.9%	0	-	-	-	-	NULL
MCOLN3	55283	genome.wustl.edu	37	1	85506861	85506861	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018298.9	-1	validated	e2-1	1.000	147	0%	222	33.8%	0	-	-	-	-	-
WDR63	126820	genome.wustl.edu	37	1	85548022	85548022	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145172.3	+1	validated	p.D109Y	1.000	268	0%	369	36%	0	-	probably_damaging(0.958)	deleterious(0.01)	deleterious(0.807)	NULL
WDR63	126820	genome.wustl.edu	37	1	85570238	85570238	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145172.3	+1	validated	p.R504Q	1.000	222	0%	340	33.2%	1	100%	possibly_damaging(0.482)	tolerated(0.42)	neutral(0.174)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
SYDE2	84144	genome.wustl.edu	37	1	85656323	85656323	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032184.1	-1	validated	p.K286N	1.000	177	0%	282	33%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
BCL10	8915	genome.wustl.edu	37	1	85733523	85733523	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003921.4	-1	reviewed	p.T163	0.975	117	0.9%	158	36.7%	3	0%	-	-	-	NULL
BCL10	8915	genome.wustl.edu	37	1	85736523	85736523	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003921.4	-1	reviewed	p.R42C	1.000	153	0%	142	26.8%	6	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CARD,superfamily_DEATH domain
COL24A1	255631	genome.wustl.edu	37	1	86591507	86591507	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152890.5	-1	validated	p.R171I	0.000	111	0%	56	28.6%	0	-	benign(0.139)	deleterious(0.02)	neutral(0.395)	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
ODF2L	57489	genome.wustl.edu	37	1	86820279	86820279	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020729.2	-1	validated	p.E538D	1.000	489	0%	499	37.3%	25	32%	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	NULL
CLCA2	9635	genome.wustl.edu	37	1	86894221	86894221	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006536.5	+1	reviewed	p.D149Y	1.000	194	0%	166	33.1%	0	-	probably_damaging(0.997)	deleterious(0.03)	deleterious(0.831)	HMMPfam_CLCA_N
CLCA2	9635	genome.wustl.edu	37	1	86898057	86898057	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006536.5	+1	reviewed	p.S197*	1.000	230	0%	261	35.2%	0	-	-	-	-	HMMPfam_CLCA_N
CLCA2	9635	genome.wustl.edu	37	1	86919077	86919077	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006536.5	+1	reviewed	p.R727S	0.101	95	0%	112	33.9%	0	-	possibly_damaging(0.647)	deleterious(0.02)	deleterious(0.610)	NULL
CLCA4	22802	genome.wustl.edu	37	1	87025752	87025752	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012128.3	+1	reviewed	p.K99	0.019	134	0%	122	27.9%	0	-	-	-	-	HMMPfam_CLCA_N
CLCA4	22802	genome.wustl.edu	37	1	87031063	87031063	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012128.3	+1	reviewed	p.D222Y	1.000	170	0%	143	30.8%	0	-	possibly_damaging(0.822)	deleterious(0.04)	deleterious(0.660)	HMMPfam_CLCA_N
CLCA4	22802	genome.wustl.edu	37	1	87040225	87040225	+	Silent	SNP	C	C	T	rs189996621	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012128.3	+1	reviewed	p.L490	0.999	34	0%	20	40%	0	-	-	-	-	HMMPfam_DUF1973
CLCA4	22802	genome.wustl.edu	37	1	87046114	87046114	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_024602.1	+1	reviewed	NULL	0.010	41	0%	16	25%	0	-	-	-	-	-
SEP15	9403	genome.wustl.edu	37	1	87329184	87329184	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004261.3	-1	reviewed	p.F157	0.997	194	0%	298	32.2%	201	41.7%	-	-	-	HMMPfam_Sep15_SelM
HS2ST1	9653	genome.wustl.edu	37	1	87570261	87570261	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012262.3	+1	reviewed	p.E318G	1.000	124	0%	107	37.4%	13	53.8%	possibly_damaging(0.945)	deleterious(0.04)	deleterious(0.738)	HMMPfam_HS2ST,superfamily_P-loop containing nucleoside triphosphate hydrolases
PKN2	5586	genome.wustl.edu	37	1	89237133	89237133	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006256.2	+1	validated	p.R218W	1.000	28	3.6%	77	39%	4	75%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_HR1,HMMSmart_Hr1,superfamily_PKN_effector
CCBL2	56267	genome.wustl.edu	37	1	89414861	89414861	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000260508	-1	known	p.R352W	1.000	180	0%	248	27%	29	41.3%	possibly_damaging(0.892)	tolerated(0.15)	deleterious(0.593)	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
RBMXL1	494115	genome.wustl.edu	37	1	89448722	89448722	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000340396	-1	known	p.E60*	0.022	295	0%	498	30.5%	16	62.5%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	NULL
RBMXL1	494115	genome.wustl.edu	37	1	89449487	89449487	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000321792	-1	known	p.G8E	1.000	356	0%	578	25.6%	7	28.5%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	NULL
GBP3	2635	genome.wustl.edu	37	1	89479849	89479849	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018284.2	-1	reviewed	p.R181I	0.998	157	0%	312	29.2%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF52540
GBP2	2634	genome.wustl.edu	37	1	89573945	89573945	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004120.3	-1	reviewed	p.F563	0.000	273	0%	308	34.1%	86	3.4%	-	-	-	HMMPfam_GBP_C,superfamily_GBP
GBP2	2634	genome.wustl.edu	37	1	89578240	89578240	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004120.3	-1	reviewed	p.S426Y	0.282	187	0%	235	33.6%	69	1.4%	benign(0.018)	tolerated(0.72)	neutral(0.002)	HMMPfam_GBP_C,superfamily_GBP
GBP2	2634	genome.wustl.edu	37	1	89582745	89582745	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004120.3	-1	reviewed	p.E266D	0.051	210	0%	238	30.3%	29	3.4%	benign(0.001)	tolerated(0.53)	neutral(0.007)	HMMPfam_GBP,superfamily_SSF52540
GBP7	388646	genome.wustl.edu	37	1	89607326	89607326	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207398.2	-1	validated	p.D457	0.023	182	0%	217	30.9%	0	-	-	-	-	HMMPfam_GBP_C,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain
GBP7	388646	genome.wustl.edu	37	1	89616080	89616080	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207398.2	-1	validated	p.F268L	0.817	255	0%	273	31.1%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_GBP,superfamily_P-loop containing nucleoside triphosphate hydrolases
GBP4	115361	genome.wustl.edu	37	1	89652779	89652779	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052941.4	-1	validated	p.E473K	0.005	227	0%	261	22.2%	2	0%	benign(0.001)	tolerated(0.09)	neutral(0.296)	HMMPfam_GBP_C,superfamily_GBP
GBP4	115361	genome.wustl.edu	37	1	89657130	89657130	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052941.4	-1	validated	p.R244*	0.988	143	0%	190	34.7%	5	0%	-	-	-	HMMPfam_GBP,superfamily_SSF52540
GBP4	115361	genome.wustl.edu	37	1	89662913	89662913	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052941.4	-1	validated	p.N39H	0.075	217	0%	277	34.7%	3	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_GBP,superfamily_SSF52540
GBP5	115362	genome.wustl.edu	37	1	89729564	89729564	+	Missense_Mutation	SNP	G	G	A	rs186974399	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134486.1	-1	validated	p.S406L	0.993	198	0%	263	30.8%	7	14.2%	possibly_damaging(0.587)	deleterious(0.05)	deleterious(0.548)	HMMPfam_GBP_C,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain
GBP5	115362	genome.wustl.edu	37	1	89732097	89732097	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134486.1	-1	validated	p.F267C	1.000	244	0%	334	36.5%	5	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GBP,superfamily_P-loop containing nucleoside triphosphate hydrolases
GBP5	115362	genome.wustl.edu	37	1	89732222	89732222	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134486.1	-1	validated	p.Q225H	0.756	213	0%	320	39.7%	10	0%	benign(0.002)	deleterious(0.01)	neutral(0.406)	HMMPfam_GBP,superfamily_P-loop containing nucleoside triphosphate hydrolases
GBP6	163351	genome.wustl.edu	37	1	89846106	89846106	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198460.2	+1	validated	p.E263*	0.000	197	0%	204	36.8%	0	-	-	-	-	HMMPfam_GBP,superfamily_P-loop containing nucleoside triphosphate hydrolases
GBP6	163351	genome.wustl.edu	37	1	89848275	89848275	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198460.2	+1	validated	p.S402Y	0.335	114	0%	234	35%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GBP_C,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain
LRRC8B	23507	genome.wustl.edu	37	1	90048484	90048484	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134476.1	+1	validated	p.R92Q	1.000	130	0%	189	34.9%	7	71.4%	benign(0.374)	tolerated(0.19)	neutral(0.168)	NULL
BARHL2	343472	genome.wustl.edu	37	1	91182393	91182393	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020063.1	-1	validated	p.P120	0.906	31	0%	39	43.6%	0	-	-	-	-	NULL
ZNF644	84146	genome.wustl.edu	37	1	91404020	91404020	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201269.1	-1	validated	p.S964L	0.937	161	0%	175	25.7%	4	25%	possibly_damaging(0.736)	deleterious(0)	deleterious(0.714)	HMMSmart_SM00355
ZNF644	84146	genome.wustl.edu	37	1	91405467	91405467	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201269.1	-1	validated	p.R482C	1.000	292	0.3%	274	28.8%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
ZNF644	84146	genome.wustl.edu	37	1	91406039	91406039	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201269.1	-1	validated	p.R291I	1.000	190	0%	173	30.6%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
HFM1	164045	genome.wustl.edu	37	1	91859927	91859927	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017975.3	-1	validated	p.N73H	1.000	178	0%	164	31.1%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
TGFBR3	7049	genome.wustl.edu	37	1	92181886	92181886	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003243.3	-1	validated	p.I591	1.000	356	0%	441	35.8%	2	50%	-	-	-	HMMPfam_Zona_pellucida,HMMSmart_ZP
TGFBR3	7049	genome.wustl.edu	37	1	92200375	92200375	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003243.3	-1	validated	p.E176K	1.000	299	0%	400	35%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
BRDT	676	genome.wustl.edu	37	1	92442717	92442717	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001726.3	+1	validated	p.K246Q	0.779	84	0%	165	40.6%	0	-	possibly_damaging(0.825)	tolerated(0.13)	deleterious(0.565)	superfamily_Bromodomain
BRDT	676	genome.wustl.edu	37	1	92442825	92442825	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001726.3	+1	validated	p.E282*	1.000	47	0%	102	36.3%	0	-	-	-	-	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain
BRDT	676	genome.wustl.edu	37	1	92446511	92446511	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001726.3	+1	validated	p.P509H	1.000	139	0%	243	30.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
BRDT	676	genome.wustl.edu	37	1	92459798	92459798	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001726.3	+1	validated	p.I758	0.000	94	0%	297	22.2%	0	-	-	-	-	NULL
EPHX4	253152	genome.wustl.edu	37	1	92518203	92518203	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173567.4	+1	validated	p.R282Q	1.000	97	2.1%	145	35.2%	4	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Abhydrolase_1,superfamily_SSF53474
BTBD8	284697	genome.wustl.edu	37	1	92613245	92613245	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183242.3	+1	validated	p.I342L	1.000	221	0%	185	32.4%	2	50%	possibly_damaging(0.633)	tolerated(0.08)	deleterious(0.521)	NULL
EVI5	7813	genome.wustl.edu	37	1	93142741	93142741	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005665.4	-1	validated	p.E422*	1.000	429	0%	593	30%	3	66.6%	-	-	-	NULL
FAM69A	388650	genome.wustl.edu	37	1	93341862	93341862	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006605.3	-1	reviewed	p.K60N	1.000	85	0%	107	29.9%	2	50%	benign(0.3)	deleterious(0.02)	deleterious(0.476)	NULL
CCDC18	343099	genome.wustl.edu	37	1	93676480	93676480	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206886.2	+1	validated	p.L562S	1.000	96	0%	112	26.8%	0	-	possibly_damaging(0.605)	deleterious(0.02)	deleterious(0.593)	NULL
DR1	1810	genome.wustl.edu	37	1	93826068	93826068	+	Missense_Mutation	SNP	G	G	A	rs182894486	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001938.2	+1	reviewed	p.E135K	1.000	157	0%	208	12.5%	28	14.2%	unknown(0)	tolerated(0.49)	-	superfamily_Histone-fold
DNTTIP2	30836	genome.wustl.edu	37	1	94335329	94335329	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000436063	-1	known	p.S790*	0.001	122	0.8%	110	30.9%	4	50%	-	-	-	NULL
DNTTIP2	30836	genome.wustl.edu	37	1	94335350	94335350	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000436063	-1	known	p.T783K	0.000	143	0.7%	139	31.7%	11	54.5%	-	-	-	NULL
ABCA4	24	genome.wustl.edu	37	1	94471025	94471025	+	Missense_Mutation	SNP	C	C	T	rs148460146	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000350.2	-1	reviewed	p.R2040Q	1.000	217	0%	285	34%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ABC_tran,HMMSmart_AAA,superfamily_SSF52540
ABCA4	24	genome.wustl.edu	37	1	94487219	94487219	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000350.2	-1	reviewed	p.L1609I	0.798	168	0%	182	31.3%	0	-	possibly_damaging(0.89)	deleterious(0.01)	deleterious(0.756)	NULL
ABCA4	24	genome.wustl.edu	37	1	94505630	94505630	+	Silent	SNP	G	G	A	rs187965758	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000350.2	-1	reviewed	p.V1192	0.000	167	0%	198	33.8%	0	-	-	-	-	NULL
ABCA4	24	genome.wustl.edu	37	1	94544179	94544179	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000350.2	-1	reviewed	p.F441L	1.000	254	0%	376	27.4%	0	-	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	NULL
ABCA4	24	genome.wustl.edu	37	1	94564462	94564462	+	Missense_Mutation	SNP	C	C	A	rs61748537		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000350.2	-1	reviewed	p.R219I	0.986	70	0%	102	36.3%	0	-	possibly_damaging(0.9)	tolerated(0.11)	deleterious(0.628)	NULL
ABCA4	24	genome.wustl.edu	37	1	94568673	94568673	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000350.2	-1	reviewed	p.I156	0.989	325	0%	384	69.3%	0	-	-	-	-	NULL
ABCD3	5825	genome.wustl.edu	37	1	94972193	94972193	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002858.3	+1	reviewed	p.R614*	1.000	200	0%	234	36.3%	13	53.8%	-	-	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
CNN3	1266	genome.wustl.edu	37	1	95367329	95367329	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001839.3	-1	validated	p.G133*	1.000	256	0%	328	37.2%	32	0%	-	-	-	superfamily_Calponin-homology domain CH-domain
DPYD	1806	genome.wustl.edu	37	1	97564116	97564116	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000110.3	-1	reviewed	p.E899*	0.998	370	0%	210	31.4%	0	-	-	-	-	superfamily_SSF54862
DPYD	1806	genome.wustl.edu	37	1	97847958	97847958	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000110.3	-1	reviewed	p.K655N	0.987	109	0%	90	26.7%	0	-	benign(0.028)	tolerated(0.06)	neutral(0.324)	superfamily_SSF51395
DPYD	1806	genome.wustl.edu	37	1	98348822	98348822	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000110.3	-1	reviewed	p.F50V	1.000	285	0%	200	32%	0	-	benign(0)	tolerated(0.28)	neutral(0.032)	superfamily_Helical_ferredxn
MIR137	406928	genome.wustl.edu	37	1	98511713	98511713	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000385223	-1	known	NULL	1.000	41	0%	28	32.1%	0	-	-	-	-	-
LPPR5	163404	genome.wustl.edu	37	1	99418872	99418872	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037317.1	-1	reviewed	p.I125M	1.000	78	0%	79	32.9%	0	-	possibly_damaging(0.822)	deleterious(0)	deleterious(0.756)	HMMPfam_PAP2,HMMSmart_SM00014,superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase
PALMD	54873	genome.wustl.edu	37	1	100154363	100154363	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017734.4	+1	validated	p.D183Y	1.000	60	0%	47	42.6%	5	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Paralemmin
PALMD	54873	genome.wustl.edu	37	1	100154996	100154996	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017734.4	+1	validated	p.D394Y	1.000	62	0%	51	27.5%	15	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
AGL	178	genome.wustl.edu	37	1	100379225	100379225	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000028.2	+1	reviewed	p.D1364	0.994	186	0%	222	32.9%	1	100%	-	-	-	superfamily_Six-hairpin glycosidases,HMMPfam_GDE_C
SLC35A3	23443	genome.wustl.edu	37	1	100472651	100472651	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012243.1	+1	provisional	p.K135T	0.996	228	0%	439	34.9%	13	53.8%	benign(0.382)	tolerated(0.34)	neutral(0.145)	HMMPfam_Nuc_sug_transp,superfamily_Multidrug resistance efflux transporter EmrE
SASS6	163786	genome.wustl.edu	37	1	100553791	100553791	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194292.1	-1	validated	p.V559A	1.000	163	0%	212	32.1%	0	-	possibly_damaging(0.625)	deleterious(0.03)	deleterious(0.583)	NULL
SASS6	163786	genome.wustl.edu	37	1	100576003	100576003	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194292.1	-1	validated	p.K236E	1.000	449	0%	516	39%	1	0%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
LRRC39	127495	genome.wustl.edu	37	1	100620719	100620719	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144620.2	-1	provisional	p.I234L	1.000	297	0%	361	33.8%	0	-	probably_damaging(0.97)	tolerated(1)	neutral(0.412)	HMMSmart_SM00369,superfamily_L domain-like
LRRC39	127495	genome.wustl.edu	37	1	100626119	100626119	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144620.2	-1	provisional	p.R41Q	0.924	317	0%	446	37.2%	0	-	possibly_damaging(0.805)	tolerated(0.11)	deleterious(0.575)	NULL
EXTL2	2135	genome.wustl.edu	37	1	101339742	101339742	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033025.1	-1	validated	p.F250C	1.000	109	0%	76	48.7%	8	25%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	HMMPfam_Glyco_transf_64,superfamily_Nucleotide-diphospho-sugar transferases
EXTL2	2135	genome.wustl.edu	37	1	101339886	101339886	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033025.1	-1	validated	p.S202F	0.359	86	0%	54	24.1%	7	28.5%	benign(0)	tolerated(0.09)	neutral(0.296)	HMMPfam_Glyco_transf_64,superfamily_Nucleotide-diphospho-sugar transferases
S1PR1	1901	genome.wustl.edu	37	1	101705418	101705418	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001400.4	+1	reviewed	p.A293V	0.995	49	0%	62	35.5%	4	50%	benign(0.002)	tolerated(0.09)	neutral(0.296)	HMMPfam_7tm_1,superfamily_SSF81321
COL11A1	1301	genome.wustl.edu	37	1	103491481	103491481	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080629.2	-1	reviewed	p.M270L	0.994	445	0%	495	27.7%	0	-	benign(0.013)	tolerated(0.73)	neutral(0.002)	NULL
COL11A1	1301	genome.wustl.edu	37	1	103544279	103544279	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080629.2	-1	reviewed	p.D141	1.000	259	0%	136	28.7%	0	-	-	-	-	HMMSmart_LamG,HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2
COL11A1	1301	genome.wustl.edu	37	1	103548440	103548440	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080629.2	-1	reviewed	p.K65N	1.000	307	0%	225	30.2%	0	-	unknown(0)	deleterious(0.02)	-	HMMSmart_TSPN,superfamily_ConA_like_lec_gl
COL11A1	1301	genome.wustl.edu	37	1	103573706	103573706	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080629.2	-1	reviewed	p.T10M	1.000	216	0%	249	29.3%	0	-	unknown(0)	deleterious(0.03)	-	NULL
NTNG1	22854	genome.wustl.edu	37	1	107866982	107866982	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113226.1	+1	validated	p.F109V	1.000	182	0.5%	112	34.8%	5	60%	benign(0)	tolerated(0.46)	neutral(0.012)	HMMPfam_Laminin_N,HMMSmart_SM00136
FAM102B	284611	genome.wustl.edu	37	1	109143230	109143230	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010883.2	+1	validated	p.F60	1.000	244	0%	295	31.9%	3	0%	-	-	-	HMMPfam_Eeig1
PRPF38B	55119	genome.wustl.edu	37	1	109242491	109242491	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018061.2	+1	validated	p.S497Y	1.000	65	0%	110	31.8%	44	31.8%	unknown(0)	tolerated(0.09)	-	NULL
AKNAD1	254268	genome.wustl.edu	37	1	109358837	109358837	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152763.3	-1	validated	p.D823N	1.000	329	0%	492	36%	0	-	benign(0.355)	deleterious(0)	deleterious(0.557)	NULL
AKNAD1	254268	genome.wustl.edu	37	1	109369896	109369896	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152763.3	-1	validated	p.G623*	0.081	236	0%	406	30.3%	0	-	-	-	-	NULL
KIAA1324	57535	genome.wustl.edu	37	1	109742791	109742791	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020775.3	+1	validated	p.I913	1.000	63	0%	150	29.3%	173	54.3%	-	-	-	NULL
ATXN7L2	127002	genome.wustl.edu	37	1	110030326	110030326	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153340.4	+1	validated	p.I200	0.000	57	0%	92	32.6%	1	0%	-	-	-	NULL
GPR61	83873	genome.wustl.edu	37	1	110086413	110086413	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031936.4	+1	validated	p.E257K	1.000	73	0%	107	34.6%	0	-	possibly_damaging(0.654)	tolerated(0.29)	neutral(0.259)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
GSTM5	2949	genome.wustl.edu	37	1	110255255	110255255	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000851.3	+1	reviewed	p.R18C	1.000	90	0%	86	32.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GST_N,superfamily_Thioredoxin-like
EPS8L3	79574	genome.wustl.edu	37	1	110293381	110293381	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139053.1	-1	reviewed	p.S558	0.920	69	0%	104	36.5%	0	-	-	-	-	NULL
SLC6A17	388662	genome.wustl.edu	37	1	110714772	110714772	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010898.2	+1	validated	p.R126H	1.000	131	0%	143	30.8%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_SNF
KCNC4	3749	genome.wustl.edu	37	1	110754265	110754265	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004978.3	+1	reviewed	p.E48D	1.000	38	0%	32	34.4%	0	-	possibly_damaging(0.744)	deleterious(0.01)	deleterious(0.679)	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain
RBM15	64783	genome.wustl.edu	37	1	110883361	110883361	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022768.4	+1	validated	p.K445T	1.000	44	0%	86	34.9%	4	75%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
SLC16A4	9122	genome.wustl.edu	37	1	110906469	110906469	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004696.1	-1	provisional	p.F461L	1.000	146	0%	244	33.2%	4	0%	possibly_damaging(0.767)	tolerated(1)	neutral(0.284)	superfamily_MFS general substrate transporter
PROK1	84432	genome.wustl.edu	37	1	110993855	110993855	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032414.2	+1	validated	p.R6Q	0.000	238	0%	325	38.2%	0	-	benign(0)	tolerated(1)	-	HMMPfam_Prokineticin
KCNA10	3744	genome.wustl.edu	37	1	111061363	111061363	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005549.2	-1	reviewed	p.F16C	1.000	78	0%	85	41.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
KCNA2	3737	genome.wustl.edu	37	1	111147159	111147159	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004974.2	-1	reviewed	p.R82	0.993	82	0%	99	33.3%	0	-	-	-	-	HMMSmart_BTB,HMMPfam_K_tetra,superfamily_BTB/POZ_fold
KCNA3	3738	genome.wustl.edu	37	1	111216299	111216299	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002232.3	-1	reviewed	p.S378L	1.000	99	0%	110	42.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_SSF81324
KCNA3	3738	genome.wustl.edu	37	1	111216880	111216880	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002232.3	-1	reviewed	p.I184	1.000	67	0%	44	29.5%	0	-	-	-	-	HMMSmart_BTB,HMMPfam_K_tetra,superfamily_BTB/POZ_fold
KCNA3	3738	genome.wustl.edu	37	1	111216985	111216985	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002232.3	-1	reviewed	p.F149	1.000	67	0%	41	34.1%	0	-	-	-	-	HMMSmart_BTB,HMMPfam_K_tetra,superfamily_BTB/POZ_fold
LRIF1	55791	genome.wustl.edu	37	1	111490669	111490669	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018372.3	-1	validated	p.R741Q	1.000	170	0%	149	35.6%	13	23%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CHI3L2	1117	genome.wustl.edu	37	1	111778294	111778294	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004000.2	+1	validated	p.K172E	0.002	139	0%	222	31.5%	0	-	benign(0.003)	tolerated(1)	-	HMMPfam_Glyco_hydro_18,HMMSmart_Glyco_18,superfamily_Glyco_hydro_cat
ADORA3	140	genome.wustl.edu	37	1	112029217	112029217	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020683.6	-1	reviewed	p.D288G	0.011	152	0%	215	28.8%	1	0%	probably_damaging(0.988)	deleterious(0.02)	deleterious(0.821)	HMMPfam_7tm_1
ADORA3	140	genome.wustl.edu	37	1	112031459	112031459	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000414219	-1	known	p.G75E	0.516	291	0%	500	34.4%	0	-	-	-	-	superfamily_Immunoglobulin
FAM212B	55924	genome.wustl.edu	37	1	112269689	112269689	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019099.4	-1	validated	p.T265	0.000	109	0%	105	36.2%	0	-	-	-	-	NULL
KCND3	3752	genome.wustl.edu	37	1	112323347	112323347	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004980.3	-1	reviewed	p.R446C	1.000	78	0%	118	34.7%	4	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
KCND3	3752	genome.wustl.edu	37	1	112524471	112524471	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004980.3	-1	reviewed	p.R293H	1.000	89	0%	143	35%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CTTNBP2NL	55917	genome.wustl.edu	37	1	112998576	112998576	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018704.2	+1	validated	p.V154	0.999	34	0%	33	21.2%	9	11.1%	-	-	-	HMMPfam_CortBP2
CTTNBP2NL	55917	genome.wustl.edu	37	1	112998792	112998792	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018704.2	+1	validated	p.K226N	1.000	152	0%	305	36.7%	8	37.5%	possibly_damaging(0.783)	tolerated(0.1)	deleterious(0.579)	HMMPfam_CortBP2
MOV10	4343	genome.wustl.edu	37	1	113240701	113240701	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130079.1	+1	validated	p.R762C	0.996	82	0%	90	37.8%	43	46.5%	benign(0.284)	tolerated(0.14)	neutral(0.337)	superfamily_P-loop containing nucleoside triphosphate hydrolases
MAGI3	260425	genome.wustl.edu	37	1	114128108	114128108	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142782.1	+1	validated	p.S218Y	1.000	107	0%	144	27.8%	2	100%	possibly_damaging(0.508)	deleterious(0.03)	deleterious(0.534)	HMMSmart_GuKc
MAGI3	260425	genome.wustl.edu	37	1	114223941	114223941	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142782.1	+1	validated	p.G1104D	1.000	175	0%	261	34.5%	3	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_PDZ
MAGI3	260425	genome.wustl.edu	37	1	114226563	114226563	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142782.1	+1	validated	p.T1458I	0.998	83	0%	151	33.1%	5	20%	probably_damaging(0.954)	deleterious(0)	deleterious(0.842)	NULL
PHTF1	10745	genome.wustl.edu	37	1	114253066	114253066	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006608.2	-1	validated	p.R360Q	0.961	75	0%	83	49.4%	20	45%	benign(0.067)	deleterious(0.03)	neutral(0.369)	NULL
PHTF1	10745	genome.wustl.edu	37	1	114280744	114280744	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006608.2	-1	validated	p.Y107H	1.000	136	0%	190	36.8%	12	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
AP4B1	10717	genome.wustl.edu	37	1	114437878	114437878	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006594.2	-1	validated	p.R677W	0.997	95	0%	148	39.9%	48	35.4%	benign(0)	deleterious(0.04)	neutral(0.349)	HMMPfam_B2-adapt-app_C
AP4B1	10717	genome.wustl.edu	37	1	114439044	114439044	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006594.2	-1	validated	p.R449I	0.942	96	1%	205	32.2%	26	34.6%	benign(0.001)	tolerated(0.21)	neutral(0.044)	HMMPfam_Adaptin_N,superfamily_ARM-type_fold
HIPK1	204851	genome.wustl.edu	37	1	114483216	114483216	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198268.1	+1	reviewed	p.D71N	1.000	168	0%	280	33.6%	4	75%	probably_damaging(0.959)	deleterious(0.02)	deleterious(0.786)	NULL
OLFML3	56944	genome.wustl.edu	37	1	114524201	114524201	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020190.2	+1	validated	p.R344H	1.000	80	0%	86	26.7%	66	1.5%	probably_damaging(1)	tolerated(0.3)	deleterious(0.528)	HMMPfam_OLF,HMMSmart_SM00284
TRIM33	51592	genome.wustl.edu	37	1	114942100	114942100	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015906.3	-1	reviewed	p.K1033N	1.000	186	0%	185	31.4%	4	75%	probably_damaging(0.991)	tolerated(0.07)	deleterious(0.763)	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain
DENND2C	163259	genome.wustl.edu	37	1	115137122	115137122	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198459.3	-1	validated	p.I744	0.999	306	0%	460	33.3%	0	-	-	-	-	NULL
DENND2C	163259	genome.wustl.edu	37	1	115166230	115166230	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198459.3	-1	validated	p.R281*	1.000	149	0%	198	31.8%	0	-	-	-	-	NULL
DENND2C	163259	genome.wustl.edu	37	1	115168119	115168119	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198459.3	-1	validated	p.N163H	0.216	113	0%	124	32.3%	0	-	benign(0)	tolerated(0.43)	neutral(0.013)	NULL
AMPD1	270	genome.wustl.edu	37	1	115220137	115220137	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000036.2	-1	reviewed	e10-2	1.000	54	0%	74	28.4%	0	-	-	-	-	-
SYCP1	6847	genome.wustl.edu	37	1	115453042	115453042	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003176.2	+1	validated	p.E449*	1.000	118	0%	102	29.4%	0	-	-	-	-	HMMPfam_SCP-1
SYCP1	6847	genome.wustl.edu	37	1	115468947	115468947	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003176.2	+1	validated	p.E617*	1.000	100	0%	48	37.5%	0	-	-	-	-	HMMPfam_SCP-1
CASQ2	845	genome.wustl.edu	37	1	116275561	116275561	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001232.3	-1	reviewed	p.F189	1.000	214	0%	280	34.6%	0	-	-	-	-	HMMPfam_Calsequestrin,superfamily_Thioredoxin-like
ATP1A1	476	genome.wustl.edu	37	1	116926731	116926731	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000701.7	+1	reviewed	p.K36N	1.000	92	0%	134	37.3%	183	44.2%	probably_damaging(0.973)	deleterious(0)	deleterious(0.859)	HMMPfam_Cation_ATPase_N
ATP1A1	476	genome.wustl.edu	37	1	116944185	116944185	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000701.7	+1	reviewed	p.I953	1.000	418	0%	523	33.7%	1413	42.5%	-	-	-	HMMPfam_Cation_ATPase_C,superfamily_Calcium ATPase transmembrane domain M
CD58	965	genome.wustl.edu	37	1	117086943	117086943	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001779.2	-1	reviewed	p.L118	0.000	109	0%	160	35%	9	44.4%	-	-	-	superfamily_Immunoglobulin
CD58	965	genome.wustl.edu	37	1	117087140	117087140	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001779.2	-1	reviewed	p.E53*	0.005	183	0%	180	33.3%	6	16.6%	-	-	-	superfamily_Immunoglobulin
CD2	914	genome.wustl.edu	37	1	117307133	117307133	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001767.3	+1	validated	p.I214T	0.000	173	0%	266	35.3%	11	0%	benign(0.004)	deleterious(0.02)	neutral(0.383)	NULL
CD101	9398	genome.wustl.edu	37	1	117552812	117552812	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004258.3	+1	validated	p.E128D	0.000	63	0%	110	33.6%	0	-	benign(0.059)	tolerated(0.55)	neutral(0.011)	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
TTF2	8458	genome.wustl.edu	37	1	117603091	117603091	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003594.3	+1	reviewed	p.L15I	0.831	191	0%	280	31.4%	1	100%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_zf-GRF
TTF2	8458	genome.wustl.edu	37	1	117617783	117617783	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003594.3	+1	reviewed	p.E193*	0.001	99	0%	192	33.9%	1	0%	-	-	-	NULL
GDAP2	54834	genome.wustl.edu	37	1	118439543	118439543	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017686.3	-1	validated	p.R289*	1.000	226	0%	201	28.9%	9	33.3%	-	-	-	NULL
WDR3	10885	genome.wustl.edu	37	1	118496162	118496162	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006784.2	+1	reviewed	p.A756S	1.000	175	0%	135	28.9%	21	66.6%	benign(0.08)	tolerated(0.26)	neutral(0.040)	HMMPfam_Utp12
SPAG17	200162	genome.wustl.edu	37	1	118516064	118516064	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206996.2	-1	validated	p.S2042Y	0.962	355	0%	290	28.6%	0	-	possibly_damaging(0.907)	deleterious(0.05)	deleterious(0.706)	NULL
SPAG17	200162	genome.wustl.edu	37	1	118537134	118537134	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206996.2	-1	validated	p.V1691	1.000	210	0%	173	34.7%	2	0%	-	-	-	NULL
SPAG17	200162	genome.wustl.edu	37	1	118574425	118574425	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206996.2	-1	validated	p.P1167S	0.528	322	0%	318	32.1%	0	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
SPAG17	200162	genome.wustl.edu	37	1	118598466	118598466	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206996.2	-1	validated	p.S871Y	0.000	326	0%	308	30.2%	0	-	benign(0.313)	tolerated(0.09)	neutral(0.394)	NULL
TBX15	6913	genome.wustl.edu	37	1	119427675	119427675	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152380.2	-1	reviewed	p.G391R	1.000	97	0%	137	30.7%	0	-	probably_damaging(0.991)	deleterious(0.04)	deleterious(0.793)	NULL
TBX15	6913	genome.wustl.edu	37	1	119427953	119427953	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152380.2	-1	reviewed	p.R298Q	1.000	88	0%	143	32.9%	0	-	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	NULL
TBX15	6913	genome.wustl.edu	37	1	119456803	119456803	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152380.2	-1	reviewed	e5-1	1.000	259	0%	194	43.8%	0	-	-	-	-	-
HMGCS2	3158	genome.wustl.edu	37	1	120306873	120306873	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005518.3	-1	reviewed	p.D161Y	1.000	116	0%	155	30.3%	15	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_HMG_COA_SYNTHASE,HMMPfam_HMG_CoA_synt_N,superfamily_Thiolase-like
HMGCS2	3158	genome.wustl.edu	37	1	120307056	120307056	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005518.3	-1	reviewed	p.E100K	1.000	167	0%	191	35.1%	7	71.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HMG_CoA_synt_N,superfamily_Thiolase-like
FCGR1B	2210	genome.wustl.edu	37	1	120927286	120927286	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017986.2	-1	validated	p.E232*	0.716	383	0%	611	15.9%	8	0%	-	-	-	NULL
FCGR1B	2210	genome.wustl.edu	37	1	120930168	120930168	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017986.2	-1	validated	p.K145Q	0.013	433	0%	663	26.5%	2	0%	benign(0.424)	tolerated(0.07)	neutral(0.457)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
NBPF9	400818	genome.wustl.edu	37	1	144815996	144815996	+	Missense_Mutation	SNP	C	C	T	rs147255351		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037675.2	+1	predicted	p.R208C	0.000	296	0%	526	36.1%	3	33.3%	possibly_damaging(0.812)	tolerated(0.21)	neutral(0.349)	NULL
PDE4DIP	9659	genome.wustl.edu	37	1	144857691	144857691	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014644.4	-1	validated	p.M2121I	0.997	250	0%	451	18.4%	4	25%	-	-	-	NULL
PDE4DIP	9659	genome.wustl.edu	37	1	144868113	144868113	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014644.4	-1	validated	p.D1776N	0.001	317	0%	478	16.5%	5	20%	benign(0)	tolerated(0.66)	neutral(0.003)	NULL
PDE4DIP	9659	genome.wustl.edu	37	1	144916668	144916668	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014644.4	-1	validated	p.E563*	1.000	397	0%	450	19.6%	30	0%	-	-	-	NULL
PDE4DIP	9659	genome.wustl.edu	37	1	144917636	144917636	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014644.4	-1	validated	p.R490W	1.000	115	0%	151	15.9%	20	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
TXNIP	10628	genome.wustl.edu	37	1	145440082	145440082	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006472.3	+1	validated	p.F172L	1.000	92	0%	199	38.2%	120	17.5%	benign(0.023)	tolerated(0.2)	neutral(0.050)	superfamily_Ig_E-set
ANKRD35	148741	genome.wustl.edu	37	1	145557101	145557101	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144698.3	+1	validated	p.V105I	1.000	283	0%	547	30.2%	1	0%	benign(0.101)	tolerated(0.41)	neutral(0.022)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
CD160	11126	genome.wustl.edu	37	1	145704266	145704266	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007053.2	-1	validated	p.E51*	0.200	163	0%	296	29.4%	0	-	-	-	-	NULL
GJA8	2703	genome.wustl.edu	37	1	147380410	147380410	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005267.4	+1	reviewed	p.E110K	1.000	88	0%	160	40%	0	-	benign(0.194)	tolerated(0.17)	neutral(0.077)	HMMPfam_Connexin
NBPF14	25832	genome.wustl.edu	37	1	148004558	148004558	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015383.1	-1	predicted	p.F919S	0.020	421	0%	569	21.8%	10	30%	possibly_damaging(0.701)	deleterious(0)	deleterious(0.697)	NULL
FCGR1A	2209	genome.wustl.edu	37	1	149760153	149760153	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000566.3	+1	reviewed	p.G180V	0.009	329	0%	548	29.4%	7	0%	probably_damaging(1)	tolerated(0.45)	deleterious(0.512)	HMMSmart_SM00409,superfamily_Immunoglobulin
HIST2H2BE	8349	genome.wustl.edu	37	1	149858002	149858002	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003528.2	-1	reviewed	p.M63I	1.000	205	0%	399	34.8%	10	30%	benign(0.028)	deleterious(0.02)	neutral(0.385)	HMMSmart_SM00427,HMMPfam_Histone,superfamily_Histone-fold
SV2A	9900	genome.wustl.edu	37	1	149884792	149884792	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014849.3	-1	validated	p.D201N	1.000	43	0%	83	44.6%	0	-	benign(0.006)	tolerated(0.75)	neutral(0.002)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SV2A	9900	genome.wustl.edu	37	1	149884936	149884936	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014849.3	-1	validated	p.E153*	1.000	77	0%	109	35.8%	3	0%	-	-	-	superfamily_MFS general substrate transporter
SF3B4	10262	genome.wustl.edu	37	1	149897810	149897810	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005850.3	-1	reviewed	p.S277	1.000	42	0%	66	40.9%	96	42.7%	-	-	-	NULL
MTMR11	10903	genome.wustl.edu	37	1	149905806	149905806	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181873.3	-1	validated	p.R166Q	0.935	76	0%	168	36.3%	3	0%	probably_damaging(0.994)	tolerated(0.37)	deleterious(0.471)	HMMPfam_Myotub-related,superfamily_SSF52799
OTUD7B	56957	genome.wustl.edu	37	1	149943175	149943175	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020205.2	-1	validated	p.K30N	1.000	147	0%	217	36.4%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_UBA-like
ANP32E	81611	genome.wustl.edu	37	1	150204195	150204195	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030920.3	-1	validated	p.K42*	1.000	124	0%	263	31.6%	30	40%	-	-	-	superfamily_L domain-like
PRPF3	9129	genome.wustl.edu	37	1	150316693	150316693	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004698.2	+1	reviewed	p.T494	0.848	65	0%	227	34.8%	30	46.6%	-	-	-	HMMPfam_PRP3
RPRD2	23248	genome.wustl.edu	37	1	150413430	150413430	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015203.3	+1	validated	p.I123L	1.000	79	0%	157	27.4%	2	100%	probably_damaging(0.988)	tolerated(0.13)	deleterious(0.690)	HMMSmart_SM00582,HMMPfam_DUF618,superfamily_ENTH/VHS domain
TARS2	80222	genome.wustl.edu	37	1	150470192	150470192	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025150.3	+1	provisional	p.A403T	0.995	74	0%	75	21.3%	16	18.7%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	HMMPfam_tRNA-synt_2b,superfamily_SSF55681
TARS2	80222	genome.wustl.edu	37	1	150479529	150479529	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025150.3	+1	provisional	p.E716*	0.997	110	0%	193	28%	18	50%	-	-	-	NULL
ECM1	1893	genome.wustl.edu	37	1	150483600	150483600	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004425.3	+1	reviewed	p.F212V	0.975	31	0%	66	39.4%	17	17.6%	benign(0)	tolerated(0.73)	neutral(0.002)	HMMPfam_ECM1
CTSS	1520	genome.wustl.edu	37	1	150722617	150722617	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004079.3	-1	reviewed	p.R220C	0.296	86	0%	196	30.1%	26	0%	probably_damaging(0.988)	tolerated(0.1)	deleterious(0.724)	HMMPfam_Peptidase_C1,HMMSmart_Pept_C1,superfamily_SSF54001
CTSS	1520	genome.wustl.edu	37	1	150727607	150727607	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004079.3	-1	reviewed	p.S90Y	0.000	148	0%	268	31%	11	0%	probably_damaging(0.974)	deleterious(0.03)	deleterious(0.780)	superfamily_SSF54001
CTSK	1513	genome.wustl.edu	37	1	150769331	150769331	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000396.2	-1	reviewed	p.R312*	1.000	237	0%	400	38%	78	3.8%	-	-	-	HMMPfam_Peptidase_C1,HMMSmart_SM00645,superfamily_Cysteine proteinases
CTSK	1513	genome.wustl.edu	37	1	150776717	150776717	+	Splice_Site	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000396.2	-1	reviewed	e4-2	0.994	123	0%	251	25.5%	0	-	-	-	-	-
CTSK	1513	genome.wustl.edu	37	1	150778367	150778367	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000396.2	-1	reviewed	p.K123N	0.998	88	0%	186	30.6%	44	6.8%	probably_damaging(0.992)	tolerated(0.18)	deleterious(0.504)	HMMPfam_Peptidase_C1,HMMSmart_SM00645,superfamily_Cysteine proteinases
SETDB1	9869	genome.wustl.edu	37	1	150900270	150900270	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145415.1	+1	reviewed	p.Q27R	0.997	109	0%	289	31.5%	6	33.3%	benign(0.258)	deleterious(0)	deleterious(0.472)	NULL
BNIPL	149428	genome.wustl.edu	37	1	151010087	151010087	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138278.3	+1	validated	p.R29I	1.000	201	0%	597	34.7%	0	-	possibly_damaging(0.528)	deleterious(0.01)	deleterious(0.584)	NULL
GABPB2	126626	genome.wustl.edu	37	1	151079528	151079528	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144618.2	+1	validated	p.I251S	0.943	43	0%	85	34.1%	1	0%	benign(0.016)	tolerated(0.22)	neutral(0.043)	NULL
GABPB2	126626	genome.wustl.edu	37	1	151079665	151079665	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144618.2	+1	validated	p.P297S	1.000	61	0%	134	29.1%	2	50%	probably_damaging(0.973)	deleterious(0.01)	deleterious(0.821)	NULL
SEMA6C	10500	genome.wustl.edu	37	1	151109021	151109021	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030913.4	-1	reviewed	p.D337Y	1.000	61	0%	121	37.2%	5	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
TMOD4	29765	genome.wustl.edu	37	1	151143489	151143489	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013353.2	-1	validated	p.I259	0.258	123	0%	289	34.9%	1	0%	-	-	-	HMMPfam_Tropomodulin,superfamily_RNI-like
ZNF687	57592	genome.wustl.edu	37	1	151259633	151259633	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020832.1	+1	provisional	p.D289A	0.042	49	0%	79	43%	8	50%	benign(0.098)	tolerated(0.38)	neutral(0.025)	NULL
SELENBP1	8991	genome.wustl.edu	37	1	151337135	151337135	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003944.2	-1	reviewed	p.G435W	1.000	145	0%	247	31.2%	32	21.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SBP56,superfamily_Cyt_cd1_haem_C
CGN	57530	genome.wustl.edu	37	1	151508113	151508113	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020770.2	+1	validated	p.S1011Y	0.999	100	0%	243	39.1%	16	43.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Myosin_tail_1
TUFT1	7286	genome.wustl.edu	37	1	151552190	151552190	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020127.2	+1	validated	p.I330	0.860	89	0%	173	31.8%	8	37.5%	-	-	-	NULL
CELF3	11189	genome.wustl.edu	37	1	151688415	151688415	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007185.4	-1	reviewed	p.E28K	1.000	114	0%	173	34.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
RIIAD1	284485	genome.wustl.edu	37	1	151694607	151694607	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144956.1	+1	validated	p.E44*	1.000	380	0%	752	31.4%	0	-	-	-	-	HMMPfam_RIIa,superfamily_cAMP-dep_prot_kin_reg_I/II_a/b
LINGO4	339398	genome.wustl.edu	37	1	151774916	151774916	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004432.2	-1	provisional	p.L89V	0.998	91	0%	113	38.9%	0	-	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058
THEM5	284486	genome.wustl.edu	37	1	151820272	151820272	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000453881	-1	known	p.F161C	0.148	161	0%	208	26.9%	0	-	-	-	-	HMMPfam_4HBT,superfamily_Thioesterase/thiol ester dehydrase-isomerase
THEM5	284486	genome.wustl.edu	37	1	151824845	151824845	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182578.3	-1	validated	p.E72*	0.013	113	0%	202	39.1%	0	-	-	-	-	NULL
THEM5	284486	genome.wustl.edu	37	1	151825987	151825987	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182578.3	-1	validated	p.L19I	0.000	66	0%	71	22.5%	0	-	benign(0.139)	tolerated(0.4)	neutral(0.028)	NULL
TCHHL1	126637	genome.wustl.edu	37	1	152057964	152057964	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008536.1	-1	provisional	p.L732F	0.000	331	0%	471	29.9%	0	-	benign(0.088)	tolerated(0.18)	neutral(0.062)	NULL
TCHHL1	126637	genome.wustl.edu	37	1	152059249	152059249	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008536.1	-1	provisional	p.H303Q	0.000	279	0%	470	33.2%	0	-	possibly_damaging(0.836)	deleterious(0.02)	deleterious(0.703)	NULL
TCHHL1	126637	genome.wustl.edu	37	1	152059927	152059927	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008536.1	-1	provisional	p.I77	0.927	132	0%	184	33.2%	0	-	-	-	-	superfamily_SSF47473
TCHH	7062	genome.wustl.edu	37	1	152081139	152081139	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007113.2	-1	provisional	p.L1518	0.001	208	0%	288	30.6%	9	33.3%	-	-	-	NULL
TCHH	7062	genome.wustl.edu	37	1	152081752	152081752	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007113.2	-1	provisional	p.S1314F	0.006	164	0%	250	38.4%	5	40%	unknown(0)	-	-	NULL
HRNR	388697	genome.wustl.edu	37	1	152188423	152188423	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009931.1	-1	validated	p.S1894	0.000	1051	0%	1583	10%	0	-	-	-	-	NULL
FLG	2312	genome.wustl.edu	37	1	152276213	152276213	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002016.1	-1	reviewed	p.H3717N	0.000	349	0%	486	35.2%	0	-	possibly_damaging(0.554)	tolerated(0.69)	neutral(0.191)	NULL
FLG	2312	genome.wustl.edu	37	1	152280546	152280546	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002016.1	-1	reviewed	p.Q2272	0.000	388	0%	568	25.9%	0	-	-	-	-	NULL
FLG	2312	genome.wustl.edu	37	1	152281669	152281669	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002016.1	-1	reviewed	p.S1898L	0.001	493	0%	659	34.3%	0	-	probably_damaging(0.99)	tolerated(0.18)	deleterious(0.497)	HMMPfam_Filaggrin
FLG	2312	genome.wustl.edu	37	1	152284474	152284474	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002016.1	-1	reviewed	p.S963Y	0.000	447	0%	587	39%	0	-	probably_damaging(0.997)	deleterious(0.03)	deleterious(0.831)	NULL
FLG	2312	genome.wustl.edu	37	1	152286895	152286895	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002016.1	-1	reviewed	p.S156Y	0.000	458	0%	521	33.8%	0	-	benign(0.423)	tolerated(0.06)	neutral(0.460)	NULL
FLG2	388698	genome.wustl.edu	37	1	152326231	152326231	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014342.2	-1	provisional	p.R1344K	0.000	512	0%	694	23.9%	0	-	unknown(0)	tolerated(0.97)	-	NULL
FLG2	388698	genome.wustl.edu	37	1	152326722	152326722	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014342.2	-1	provisional	p.G1180	0.002	169	0%	179	32.4%	0	-	-	-	-	NULL
FLG2	388698	genome.wustl.edu	37	1	152328945	152328945	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014342.2	-1	provisional	p.S439	0.003	221	0%	271	36.2%	0	-	-	-	-	NULL
LCE3E	353145	genome.wustl.edu	37	1	152538540	152538540	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178435.2	-1	validated	p.E49K	0.043	87	0%	101	43.6%	0	-	unknown(0)	-	-	NULL
KPRP	448834	genome.wustl.edu	37	1	152732378	152732378	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025231.1	+1	provisional	p.S105Y	0.006	181	0%	236	29.2%	0	-	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	NULL
KPRP	448834	genome.wustl.edu	37	1	152732617	152732617	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025231.1	+1	provisional	p.Q185K	0.728	209	0%	271	32.1%	0	-	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	NULL
IVL	3713	genome.wustl.edu	37	1	152883759	152883759	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005547.2	+1	reviewed	p.Q496*	0.000	262	0%	352	31%	0	-	-	-	-	HMMPfam_Involucrin
SPRR2E	6704	genome.wustl.edu	37	1	153066018	153066018	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024209.2	-1	validated	p.K70N	0.836	585	0%	922	28.6%	0	-	unknown(0)	-	-	NULL
PGLYRP3	114771	genome.wustl.edu	37	1	153279722	153279722	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052891.1	-1	provisional	p.R26H	0.884	57	0%	50	30%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Amidase_2,HMMSmart_PGRP
S100A12	6283	genome.wustl.edu	37	1	153346436	153346436	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005621.1	-1	reviewed	p.K49T	0.003	190	0%	266	31.2%	0	-	benign(0.249)	deleterious(0)	deleterious(0.470)	superfamily_SSF47473
S100A7L2	645922	genome.wustl.edu	37	1	153409644	153409644	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001045479.1	-1	validated	p.K77E	0.000	211	0%	273	32.6%	0	-	benign(0.35)	tolerated(0.66)	neutral(0.114)	PatternScan_EF_HAND_1,superfamily_EF-hand
S100A7L2	645922	genome.wustl.edu	37	1	153410783	153410783	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001045479.1	-1	validated	p.K19T	0.002	222	0%	411	33.1%	0	-	benign(0.35)	tolerated(0.35)	neutral(0.132)	superfamily_EF-hand
S100A14	57402	genome.wustl.edu	37	1	153587807	153587807	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020672.1	-1	provisional	p.K27N	1.000	58	0%	137	29.2%	3	66.6%	benign(0)	tolerated(0.21)	neutral(0.044)	HMMPfam_S_100,superfamily_SSF47473
SNAPIN	23557	genome.wustl.edu	37	1	153632023	153632023	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012437.4	+1	validated	p.N97S	1.000	124	0%	311	28.9%	32	40.6%	benign(0.094)	tolerated(0.14)	neutral(0.257)	NULL
SNAPIN	23557	genome.wustl.edu	37	1	153633680	153633680	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012437.4	+1	validated	p.R105Q	1.000	70	0%	176	31.8%	30	40%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
NPR1	4881	genome.wustl.edu	37	1	153661707	153661707	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000906.3	+1	validated	p.E870K	1.000	49	0%	104	33.7%	6	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain
NUP210L	91181	genome.wustl.edu	37	1	153991440	153991440	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207308.2	-1	validated	p.D1541G	1.000	72	0%	129	31%	0	-	benign(0.026)	tolerated(0.33)	neutral(0.025)	NULL
NUP210L	91181	genome.wustl.edu	37	1	154000006	154000006	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207308.2	-1	validated	p.S1308Y	1.000	222	0%	469	31.3%	1	100%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
NUP210L	91181	genome.wustl.edu	37	1	154101760	154101760	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207308.2	-1	validated	p.G357	1.000	137	0%	338	35.8%	0	-	-	-	-	NULL
NUP210L	91181	genome.wustl.edu	37	1	154112327	154112327	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207308.2	-1	validated	p.R223I	1.000	254	0%	489	37%	0	-	benign(0.314)	deleterious(0.01)	deleterious(0.504)	NULL
NUP210L	91181	genome.wustl.edu	37	1	154113926	154113926	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207308.2	-1	validated	p.E183*	1.000	141	0%	259	31.7%	1	0%	-	-	-	NULL
ATP8B2	57198	genome.wustl.edu	37	1	154317606	154317606	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020452.3	+1	reviewed	p.A849T	0.998	127	0%	293	36.2%	11	45.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Hydrolase_3,superfamily_SSF56784,superfamily_SSF81665
ATP8B2	57198	genome.wustl.edu	37	1	154318296	154318296	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020452.3	+1	reviewed	p.F938L	1.000	122	0%	159	35.2%	14	28.5%	benign(0.024)	tolerated(0.21)	neutral(0.045)	superfamily_SSF81665
KCNN3	3782	genome.wustl.edu	37	1	154698430	154698430	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002249.4	-1	reviewed	p.V555I	1.000	186	0%	237	32.9%	1	0%	possibly_damaging(0.701)	deleterious(0)	deleterious(0.697)	superfamily_Small-conductance potassium channel,superfamily_Voltage-gated potassium channels
PBXIP1	57326	genome.wustl.edu	37	1	154918103	154918103	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020524.2	-1	provisional	p.D683Y	1.000	80	0%	136	27.2%	123	30.8%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
PBXIP1	57326	genome.wustl.edu	37	1	154920792	154920792	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020524.2	-1	provisional	p.V154M	0.003	15	0%	29	37.9%	56	51.7%	benign(0.011)	tolerated(0.13)	neutral(0.253)	NULL
PBXIP1	57326	genome.wustl.edu	37	1	154924298	154924298	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020524.2	-1	provisional	p.E51K	0.146	127	0%	189	31.7%	40	22.5%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
DCST2	127579	genome.wustl.edu	37	1	155005583	155005583	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144622.2	-1	validated	p.K142N	0.894	43	0%	47	29.8%	0	-	possibly_damaging(0.923)	deleterious(0.04)	deleterious(0.722)	NULL
DCST1	149095	genome.wustl.edu	37	1	155018860	155018860	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152494.2	+1	validated	p.P465S	0.996	171	0%	270	32.2%	1	0%	benign(0.007)	tolerated(0.78)	neutral(0.001)	HMMPfam_DC_STAMP
ADAM15	8751	genome.wustl.edu	37	1	155031240	155031240	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207197.1	+1	reviewed	p.R658*	0.974	120	0%	269	29.4%	68	4.4%	-	-	-	HMMPfam_EGF_2
KRTCAP2	200185	genome.wustl.edu	37	1	155141923	155141923	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173852.3	-1	validated	p.R161K	1.000	200	0%	472	33.9%	204	39.2%	benign(0.002)	tolerated(0.54)	neutral(0.007)	NULL
TRIM46	80128	genome.wustl.edu	37	1	155150701	155150701	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025058.3	+1	validated	p.F378C	1.000	22	0%	46	21.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
THBS3	7059	genome.wustl.edu	37	1	155166926	155166926	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007112.3	-1	reviewed	p.R860*	0.018	35	0%	58	39.7%	31	25.8%	-	-	-	HMMPfam_TSP_C,superfamily_Concanavalin A-like lectins/glucanases
GBA	2629	genome.wustl.edu	37	1	155207336	155207336	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000157.3	-1	reviewed	p.Q265H	0.608	71	0%	192	26%	90	51.1%	benign(0.001)	tolerated(0.12)	neutral(0.261)	HMMPfam_Glyco_hydro_30,superfamily_(Trans)glycosidases
SCAMP3	10067	genome.wustl.edu	37	1	155228624	155228624	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005698.2	-1	reviewed	p.L170	1.000	89	0%	180	36.1%	112	39.2%	-	-	-	HMMPfam_SCAMP
FDPS	2224	genome.wustl.edu	37	1	155288068	155288068	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135821.1	+1	reviewed	p.E224K	0.999	71	0%	137	37.2%	250	49.2%	possibly_damaging(0.9)	deleterious(0.02)	deleterious(0.740)	HMMPfam_polyprenyl_synt,superfamily_Terpenoid_synth
RUSC1	23623	genome.wustl.edu	37	1	155291968	155291968	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105203.1	+1	validated	p.Q135R	0.995	46	0%	88	14.8%	0	-	possibly_damaging(0.806)	deleterious(0)	deleterious(0.748)	NULL
ASH1L	55870	genome.wustl.edu	37	1	155307459	155307459	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018489.2	-1	reviewed	p.R2963*	1.000	106	0%	156	24.4%	19	42.1%	-	-	-	NULL
ASH1L	55870	genome.wustl.edu	37	1	155340768	155340768	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018489.2	-1	reviewed	p.I2113	1.000	121	0%	226	27%	7	28.5%	-	-	-	HMMSmart_SM00570,superfamily_SET domain
ASH1L	55870	genome.wustl.edu	37	1	155452138	155452138	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018489.2	-1	reviewed	p.S175P	0.997	142	0%	256	33.6%	0	-	benign(0)	tolerated(0.19)	neutral(0.050)	NULL
YY1AP1	55249	genome.wustl.edu	37	1	155630572	155630572	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139118.1	-1	reviewed	p.E423K	0.018	250	0%	345	40%	58	44.8%	benign(0.313)	deleterious(0.01)	deleterious(0.503)	NULL
GON4L	54856	genome.wustl.edu	37	1	155735028	155735028	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037533.1	-1	validated	p.K1412N	0.005	102	0%	180	37.2%	7	14.2%	benign(0.174)	deleterious(0.01)	neutral(0.422)	NULL
KIAA0907	22889	genome.wustl.edu	37	1	155884080	155884080	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014949.2	-1	predicted	p.E559	0.990	131	0%	234	34.6%	34	64.7%	-	-	-	NULL
ARHGEF2	9181	genome.wustl.edu	37	1	155932766	155932766	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004723.3	-1	validated	p.R283	0.611	57	0%	107	43.9%	41	46.3%	-	-	-	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
ARHGEF2	9181	genome.wustl.edu	37	1	155932863	155932863	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004723.3	-1	validated	p.L251P	0.963	68	0%	128	36.7%	35	20%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
LMNA	4000	genome.wustl.edu	37	1	156106031	156106031	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170707.2	+1	reviewed	p.S395L	1.000	40	0%	83	33.7%	356	37.3%	benign(0.364)	tolerated(0.08)	neutral(0.416)	superfamily_Lamin A/C globular tail domain
SMG5	23381	genome.wustl.edu	37	1	156235862	156235862	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015327.2	-1	validated	p.R522Q	0.997	73	0%	111	21.6%	32	46.8%	probably_damaging(0.999)	tolerated(0.59)	deleterious(0.495)	NULL
SMG5	23381	genome.wustl.edu	37	1	156244470	156244470	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015327.2	-1	validated	p.K154N	1.000	158	0%	319	31.3%	29	27.5%	benign(0.055)	tolerated(0.32)	neutral(0.028)	HMMPfam_EST1
TMEM79	84283	genome.wustl.edu	37	1	156261321	156261321	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032323.2	+1	validated	p.E373K	0.783	23	0%	32	25%	20	20%	possibly_damaging(0.916)	tolerated(0.11)	deleterious(0.639)	NULL
RHBG	57127	genome.wustl.edu	37	1	156354849	156354849	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026549.1	+1	reviewed	NULL	0.003	7	0.000	6	0.667	0	-	-	-	-	-
IQGAP3	128239	genome.wustl.edu	37	1	156510675	156510675	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178229.4	-1	validated	p.R855H	0.971	71	0%	146	28.1%	3	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
BCAN	63827	genome.wustl.edu	37	1	156618580	156618580	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021948.3	+1	validated	p.K330	1.000	24	0%	34	29.4%	0	-	-	-	-	HMMPfam_Xlink,HMMSmart_SM00445,superfamily_C-type lectin-like
BCAN	63827	genome.wustl.edu	37	1	156622108	156622108	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021948.3	+1	validated	p.E456*	0.998	39	0%	108	40.7%	0	-	-	-	-	NULL
NES	10763	genome.wustl.edu	37	1	156641994	156641994	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006617.1	-1	reviewed	p.E662D	0.011	122	0%	149	31.5%	7	14.2%	probably_damaging(0.998)	deleterious(0.05)	deleterious(0.820)	NULL
NES	10763	genome.wustl.edu	37	1	156642895	156642895	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006617.1	-1	reviewed	p.A362V	0.307	73	0%	174	32.2%	23	8.6%	benign(0.335)	deleterious(0)	deleterious(0.550)	NULL
NES	10763	genome.wustl.edu	37	1	156646444	156646444	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006617.1	-1	reviewed	p.G205C	1.000	8	0.000	6	0.833	0	-	possibly_damaging(0.672)	deleterious(0)	deleterious(0.682)	HMMPfam_Filament
INSRR	3645	genome.wustl.edu	37	1	156812025	156812025	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014215.1	-1	validated	p.M1092I	1.000	141	0%	254	33.5%	0	-	possibly_damaging(0.455)	tolerated(0.64)	neutral(0.152)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
NTRK1	4914	genome.wustl.edu	37	1	156830924	156830924	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002529.3	+1	reviewed	p.E66D	1.000	5	0.000	7	0.714	0	-	benign(0)	tolerated(0.31)	neutral(0.027)	superfamily_L domain-like
ARHGEF11	9826	genome.wustl.edu	37	1	156912497	156912497	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198236.1	-1	reviewed	p.S1104*	0.721	209	0%	416	30.5%	19	21%	-	-	-	HMMSmart_PH,superfamily_SSF50729
ETV3L	440695	genome.wustl.edu	37	1	157062520	157062520	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004341.2	-1	validated	p.R336K	0.000	114	0%	175	31.4%	0	-	benign(0.006)	tolerated(0.84)	neutral(0.001)	NULL
ETV3	2117	genome.wustl.edu	37	1	157103875	157103875	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005240.1	-1	validated	p.N143K	0.003	253	0%	332	24.7%	0	-	benign(0)	-	-	superfamily_SSF46785
FCRL5	83416	genome.wustl.edu	37	1	157512918	157512918	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031281.2	-1	validated	p.S285Y	0.016	101	0%	177	31.1%	0	-	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	NULL
FCRL2	79368	genome.wustl.edu	37	1	157739822	157739822	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030764.3	-1	reviewed	p.F143L	0.001	100	0%	136	28.7%	0	-	probably_damaging(0.995)	deleterious(0.03)	deleterious(0.822)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
KIRREL	55243	genome.wustl.edu	37	1	158064535	158064535	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018240.5	+1	validated	p.F633	0.994	28	0%	28	35.7%	4	0%	-	-	-	NULL
KIRREL	55243	genome.wustl.edu	37	1	158064536	158064536	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018240.5	+1	validated	p.D634N	1.000	28	0%	29	44.8%	4	0%	possibly_damaging(0.907)	tolerated(0.18)	neutral(0.416)	NULL
KIRREL	55243	genome.wustl.edu	37	1	158064898	158064898	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018240.5	+1	validated	p.Q754H	1.000	49	0%	79	30.4%	3	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
CD1C	911	genome.wustl.edu	37	1	158260923	158260923	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001765.2	+1	reviewed	e2-1	0.000	83	0%	124	38.7%	0	-	-	-	-	-
CD1C	911	genome.wustl.edu	37	1	158261173	158261173	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001765.2	+1	reviewed	p.S104I	0.000	93	0%	148	28.4%	0	-	benign(0.209)	tolerated(0.13)	neutral(0.273)	HMMPfam_MHC_I,superfamily_MHC_I/II-like_Ag-recog
CD1C	911	genome.wustl.edu	37	1	158262456	158262456	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000443761	+1	known	p.L162I	0.026	132	0%	200	39.5%	0	-	-	-	-	HMMPfam_C1-set,HMMSmart_SM00407,superfamily_Immunoglobulin
CD1E	913	genome.wustl.edu	37	1	158325257	158325257	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030893.2	+1	reviewed	p.Y175D	0.035	128	0%	214	34.1%	0	-	benign(0.019)	tolerated(0.25)	neutral(0.038)	superfamily_MHC antigen-recognition domain
OR10K1	391109	genome.wustl.edu	37	1	158435561	158435561	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004473.1	+1	provisional	p.E70D	0.521	329	0%	378	33.3%	0	-	probably_damaging(0.999)	tolerated(0.17)	deleterious(0.549)	HMMPfam_7tm_1,superfamily_SSF81321
OR10R2	343406	genome.wustl.edu	37	1	158450236	158450236	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004472.1	+1	provisional	p.S190N	0.132	209	0%	188	27.7%	0	-	benign(0)	tolerated(0.4)	neutral(0.016)	HMMPfam_7tm_1,superfamily_SSF81321
OR6Y1	391112	genome.wustl.edu	37	1	158517683	158517683	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005189.1	-1	provisional	p.L71	0.493	83	0%	88	34.1%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR6P1	128366	genome.wustl.edu	37	1	158532543	158532543	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000334632	-1	known	p.F284L	0.043	188	0%	264	20.8%	0	-	benign(0.001)	tolerated(1)	-	HMMPfam_7tm_1,superfamily_SSF81321
SPTA1	6708	genome.wustl.edu	37	1	158587332	158587332	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003126.2	-1	reviewed	p.N2199H	1.000	289	0%	203	33%	0	-	possibly_damaging(0.945)	tolerated(0.12)	deleterious(0.650)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SPTA1	6708	genome.wustl.edu	37	1	158590146	158590146	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003126.2	-1	reviewed	p.E2077D	0.999	159	0%	150	38%	0	-	probably_damaging(0.985)	deleterious(0.01)	deleterious(0.838)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SPTA1	6708	genome.wustl.edu	37	1	158607881	158607881	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003126.2	-1	reviewed	p.E1711*	1.000	219	0%	182	25.8%	0	-	-	-	-	HMMPfam_Spectrin,superfamily_Spectrin repeat
SPTA1	6708	genome.wustl.edu	37	1	158607954	158607954	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003126.2	-1	reviewed	p.K1686N	1.000	214	0%	164	31.1%	0	-	benign(0.001)	tolerated(0.07)	neutral(0.319)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SPTA1	6708	genome.wustl.edu	37	1	158615057	158615057	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003126.2	-1	reviewed	p.A1372V	0.002	195	0%	175	30.9%	0	-	benign(0.007)	tolerated(0.28)	neutral(0.032)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SPTA1	6708	genome.wustl.edu	37	1	158617352	158617352	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003126.2	-1	reviewed	p.F1291L	1.000	137	0%	143	35.7%	0	-	benign(0)	tolerated(1)	-	HMMPfam_Spectrin,superfamily_Spectrin repeat
SPTA1	6708	genome.wustl.edu	37	1	158632602	158632602	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003126.2	-1	reviewed	p.R785Q	0.997	224	0%	232	35.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SPTA1	6708	genome.wustl.edu	37	1	158636234	158636234	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003126.2	-1	reviewed	p.D698Y	1.000	108	0%	82	36.6%	0	-	possibly_damaging(0.929)	deleterious(0)	deleterious(0.821)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
OR6K2	81448	genome.wustl.edu	37	1	158670383	158670383	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005279.1	-1	provisional	p.S20	0.235	118	0%	238	26.9%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
OR6K6	128371	genome.wustl.edu	37	1	158724777	158724777	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005184.1	+1	provisional	p.P58S	0.001	204	0%	255	32.9%	0	-	benign(0.408)	tolerated(0.12)	neutral(0.393)	superfamily_Family A G protein-coupled receptor-like
OR6N2	81442	genome.wustl.edu	37	1	158747103	158747103	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005278.1	-1	provisional	p.G108E	0.988	130	0%	157	28.7%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_7tm_1,superfamily_SSF81321
MNDA	4332	genome.wustl.edu	37	1	158812154	158812154	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002432.1	+1	reviewed	p.D71Y	0.000	175	0%	155	25.8%	2	0%	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	HMMPfam_PAAD_DAPIN
PYHIN1	149628	genome.wustl.edu	37	1	158908891	158908891	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152501.3	+1	validated	p.E145*	0.000	131	0%	202	33.7%	0	-	-	-	-	NULL
PYHIN1	149628	genome.wustl.edu	37	1	158912067	158912067	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152501.3	+1	validated	p.P294T	0.000	97	0%	94	39.4%	2	0%	probably_damaging(0.99)	tolerated(0.17)	deleterious(0.500)	HMMPfam_HIN
IFI16	3428	genome.wustl.edu	37	1	158985683	158985683	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005531.2	+1	reviewed	p.R96I	0.000	126	0%	182	33.5%	7	0%	possibly_damaging(0.727)	tolerated(0.06)	deleterious(0.587)	NULL
AIM2	9447	genome.wustl.edu	37	1	159033323	159033323	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004833.1	-1	reviewed	p.N320H	0.000	364	0%	509	35%	0	-	possibly_damaging(0.745)	tolerated(0.13)	deleterious(0.526)	NULL
FCER1A	2205	genome.wustl.edu	37	1	159277567	159277567	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002001.2	+1	reviewed	p.F207V	0.000	167	0%	111	32.4%	0	-	benign(0.002)	tolerated(0.58)	neutral(0.005)	NULL
OR10J3	441911	genome.wustl.edu	37	1	159283652	159283652	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004467.1	-1	provisional	p.Q266H	0.997	161	0%	210	36.2%	0	-	benign(0.023)	tolerated(0.06)	neutral(0.324)	HMMPfam_7tm_1,superfamily_SSF81321
OR10J3	441911	genome.wustl.edu	37	1	159284366	159284366	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004467.1	-1	provisional	p.F28L	0.343	179	0%	239	31%	0	-	benign(0.001)	tolerated(0.89)	-	superfamily_SSF81321
OR10J1	26476	genome.wustl.edu	37	1	159410479	159410479	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012351.2	+1	validated	p.L311M	0.339	108	0%	113	41.6%	0	-	benign(0.192)	tolerated(0.06)	neutral(0.341)	superfamily_Family A G protein-coupled receptor-like
APCS	325	genome.wustl.edu	37	1	159558033	159558033	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001639.3	+1	reviewed	p.F69	1.000	230	0%	231	23.4%	0	-	-	-	-	HMMPfam_Pentaxin,HMMSmart_PTX,superfamily_ConA_like_lec_gl
APCS	325	genome.wustl.edu	37	1	159558332	159558332	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001639.3	+1	reviewed	p.F169S	1.000	369	0%	385	29.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pentaxin,HMMSmart_PTX,superfamily_ConA_like_lec_gl
APCS	325	genome.wustl.edu	37	1	159558431	159558431	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001639.3	+1	reviewed	p.L202P	0.479	225	0%	234	35%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pentaxin,HMMSmart_PTX,superfamily_ConA_like_lec_gl
CRP	1401	genome.wustl.edu	37	1	159683729	159683729	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000567.2	-1	reviewed	p.K87N	0.001	238	0%	326	31.9%	0	-	benign(0.139)	tolerated(0.2)	neutral(0.061)	HMMPfam_Pentaxin,HMMSmart_SM00159,superfamily_Concanavalin A-like lectins/glucanases
CRP	1401	genome.wustl.edu	37	1	159683896	159683896	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000567.2	-1	reviewed	p.E32*	0.018	92	0%	175	33.1%	0	-	-	-	-	HMMPfam_Pentaxin,HMMSmart_SM00159,superfamily_Concanavalin A-like lectins/glucanases
FCRL6	343413	genome.wustl.edu	37	1	159779355	159779355	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004310.2	+1	validated	p.G256	0.000	126	0%	141	38.3%	0	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
CCDC19	25790	genome.wustl.edu	37	1	159842948	159842948	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012337.2	-1	validated	p.E455*	0.996	109	0%	182	36.8%	2	100%	-	-	-	NULL
IGSF9	57549	genome.wustl.edu	37	1	159906609	159906609	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135050.1	-1	validated	p.P164S	1.000	64	0%	76	23.7%	21	38%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726
KCNJ10	3766	genome.wustl.edu	37	1	160012315	160012315	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002241.3	-1	reviewed	p.S3*	0.958	80	0%	96	40.6%	0	-	-	-	-	NULL
ATP1A2	477	genome.wustl.edu	37	1	160097551	160097551	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000702.3	+1	reviewed	p.I320L	1.000	83	0%	130	31.5%	0	-	benign(0.029)	tolerated(0.13)	neutral(0.254)	HMMPfam_E1-E2_ATPase,superfamily_SSF81665
ATP1A2	477	genome.wustl.edu	37	1	160098815	160098815	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000702.3	+1	reviewed	p.R421Q	0.988	98	0%	90	25.6%	0	-	possibly_damaging(0.468)	tolerated(0.09)	neutral(0.450)	HMMPfam_Hydrolase,superfamily_SSF56784,superfamily_SSF81660,superfamily_SSF81665
ATP1A2	477	genome.wustl.edu	37	1	160105036	160105036	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000702.3	+1	reviewed	p.R689Q	1.000	82	0%	137	38%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Hydrolase,superfamily_SSF56784,superfamily_SSF81665
CASQ1	844	genome.wustl.edu	37	1	160169663	160169663	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001231.4	+1	reviewed	p.T330M	1.000	278	0%	511	33.7%	1	100%	probably_damaging(0.997)	tolerated(0.25)	deleterious(0.503)	HMMPfam_Calsequestrin,superfamily_Thiordxn-like_fd
DCAF8	50717	genome.wustl.edu	37	1	160206928	160206928	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015726.3	-1	reviewed	p.A319V	1.000	73	0%	119	39.5%	24	20.8%	benign(0.004)	deleterious(0.04)	neutral(0.349)	superfamily_WD40 repeat-like
DCAF8	50717	genome.wustl.edu	37	1	160213774	160213774	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015726.3	-1	reviewed	p.D9N	1.000	237	0%	520	29.6%	20	25%	benign(0.004)	tolerated(0.83)	neutral(0.001)	NULL
COPA	1314	genome.wustl.edu	37	1	160267364	160267364	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098398.1	-1	reviewed	p.R726C	1.000	108	0%	187	64.2%	60	76.6%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_Coatomer_WDAD
COPA	1314	genome.wustl.edu	37	1	160269028	160269028	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098398.1	-1	reviewed	p.D574G	1.000	128	0%	242	31.8%	72	22.2%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_Coatomer_WDAD
SLAMF7	57823	genome.wustl.edu	37	1	160719708	160719708	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021181.3	+1	provisional	p.E158D	0.951	63	0%	88	26.1%	5	0%	probably_damaging(0.999)	tolerated(0.27)	deleterious(0.524)	NULL
LY9	4063	genome.wustl.edu	37	1	160769724	160769724	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002348.2	+1	validated	p.S102	0.000	79	0%	132	34.8%	1	0%	-	-	-	HMMSmart_SM00409,superfamily_Immunoglobulin
LY9	4063	genome.wustl.edu	37	1	160784424	160784424	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002348.2	+1	validated	p.V315	0.128	57	0%	76	25%	0	-	-	-	-	HMMSmart_SM00409,superfamily_Immunoglobulin
TSTD1	100131187	genome.wustl.edu	37	1	161007802	161007802	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113207.1	-1	validated	p.E66G	0.883	56	0%	78	33.3%	15	0%	benign(0)	tolerated(0.24)	neutral(0.037)	HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase
ARHGAP30	257106	genome.wustl.edu	37	1	161017882	161017882	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025598.1	-1	validated	p.E977*	0.968	54	0%	98	31.6%	11	0%	-	-	-	NULL
ARHGAP30	257106	genome.wustl.edu	37	1	161018349	161018349	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025598.1	-1	validated	p.R821I	0.010	279	0%	551	39%	13	0%	possibly_damaging(0.66)	tolerated(0.06)	deleterious(0.555)	NULL
ARHGAP30	257106	genome.wustl.edu	37	1	161021228	161021228	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025598.1	-1	validated	p.P432	0.483	63	0%	126	37.3%	10	0%	-	-	-	NULL
ADAMTS4	9507	genome.wustl.edu	37	1	161161935	161161935	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005099.4	-1	reviewed	p.K669N	1.000	55	0%	120	41.7%	7	0%	benign(0.078)	tolerated(0.12)	neutral(0.266)	NULL
FCER1G	2207	genome.wustl.edu	37	1	161187860	161187860	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004106.1	+1	reviewed	p.R45Q	1.000	175	0%	226	35%	67	0%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
NR1I3	9970	genome.wustl.edu	37	1	161202981	161202981	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077482.1	-1	reviewed	p.F129S	0.998	200	0%	354	31.1%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Str_ncl_receptor
SDHC	6391	genome.wustl.edu	37	1	161326471	161326471	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003001.3	+1	reviewed	p.V82	0.992	287	0%	469	32%	97	45.3%	-	-	-	HMMPfam_Sdh_cyt,superfamily_SSF81343
SDHC	6391	genome.wustl.edu	37	1	161332312	161332312	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001035511.1	+1	reviewed	p.K145	0.000	249	0%	519	15.6%	96	51%	-	-	-	NULL
FCRLA	84824	genome.wustl.edu	37	1	161681932	161681932	+	Silent	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032738.3	+1	reviewed	p.G253	0.819	80	0%	94	33%	0	-	-	-	-	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726
ATF6	22926	genome.wustl.edu	37	1	161789542	161789542	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007348.2	+1	validated	p.S343	0.184	107	0%	181	34.8%	26	23%	-	-	-	HMMSmart_BRLZ,HMMPfam_bZIP_1
NOS1AP	9722	genome.wustl.edu	37	1	162326815	162326815	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014697.2	+1	reviewed	p.S276	0.006	89	0%	86	24.4%	3	33.3%	-	-	-	NULL
NOS1AP	9722	genome.wustl.edu	37	1	162335153	162335153	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001126060.1	+1	reviewed	p.S5Y	0.001	157	0%	185	29.7%	0	-	unknown(0)	-	-	NULL
C1orf111	284680	genome.wustl.edu	37	1	162344216	162344216	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182581.3	-1	validated	p.E136D	0.984	117	0%	112	29.5%	0	-	benign(0.001)	tolerated(0.38)	neutral(0.018)	NULL
SH2D1B	117157	genome.wustl.edu	37	1	162368786	162368786	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053282.4	-1	validated	p.L97R	0.110	201	0%	283	22.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SH2 domain
SH2D1B	117157	genome.wustl.edu	37	1	162368848	162368848	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053282.4	-1	validated	p.F76L	0.799	177	0%	211	28.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain
UHMK1	127933	genome.wustl.edu	37	1	162487912	162487912	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175866.4	+1	reviewed	p.E349*	1.000	207	0%	373	34.3%	4	0%	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
DDR2	4921	genome.wustl.edu	37	1	162745466	162745466	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014796.1	+1	reviewed	p.K627N	1.000	158	0%	142	37.3%	4	0%	probably_damaging(0.988)	tolerated(0.09)	deleterious(0.734)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
HSD17B7	51478	genome.wustl.edu	37	1	162773259	162773259	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016371.2	+1	validated	p.L227F	1.000	331	0%	265	27.2%	13	53.8%	benign(0.308)	tolerated(0.66)	neutral(0.099)	superfamily_NAD(P)-binding Rossmann-fold domains
RGS4	5999	genome.wustl.edu	37	1	163044247	163044247	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102445.2	+1	reviewed	p.R269Q	0.346	240	0%	135	32.6%	8	0%	benign(0.038)	tolerated(0.31)	neutral(0.029)	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam
LRRC52	440699	genome.wustl.edu	37	1	165532833	165532833	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005214.3	+1	validated	p.T238	0.992	81	1.2%	110	35.5%	0	-	-	-	-	NULL
TADA1	117143	genome.wustl.edu	37	1	166827357	166827357	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053053.3	-1	validated	p.Q285R	1.000	110	0%	157	31.2%	5	80%	possibly_damaging(0.912)	deleterious(0.03)	deleterious(0.728)	NULL
TADA1	117143	genome.wustl.edu	37	1	166829473	166829473	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053053.3	-1	validated	p.P214	0.286	191	0%	159	28.9%	10	50%	-	-	-	NULL
MAEL	84944	genome.wustl.edu	37	1	166958650	166958650	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032858.1	+1	validated	p.E21K	0.998	49	0%	57	29.8%	3	66.6%	benign(0.013)	tolerated(0.13)	neutral(0.253)	superfamily_HMG-box,HMMPfam_DUF1898
MAEL	84944	genome.wustl.edu	37	1	166959016	166959016	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032858.1	+1	validated	p.R59*	1.000	35	0%	56	23.2%	0	-	-	-	-	superfamily_HMG-box,HMMPfam_DUF1898
GPA33	10223	genome.wustl.edu	37	1	167023597	167023597	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005814.1	-1	reviewed	p.E312*	0.000	150	0%	245	39.2%	0	-	-	-	-	NULL
DUSP27	92235	genome.wustl.edu	37	1	167095196	167095196	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080426.1	+1	provisional	p.E276D	1.000	98	0%	180	29.4%	1	100%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_DSPc,HMMSmart_DSPc,superfamily_SSF52799
DUSP27	92235	genome.wustl.edu	37	1	167095564	167095564	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080426.1	+1	provisional	p.R399Q	0.999	47	0%	104	33.7%	0	-	possibly_damaging(0.829)	tolerated(0.21)	neutral(0.358)	NULL
POU2F1	5451	genome.wustl.edu	37	1	167367341	167367341	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002697.2	+1	provisional	p.R391C	1.000	217	0%	397	38.5%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
POU2F1	5451	genome.wustl.edu	37	1	167381285	167381285	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002697.2	+1	provisional	p.P526S	0.999	104	0%	174	29.3%	4	50%	unknown(0)	tolerated(0.14)	-	NULL
RCSD1	92241	genome.wustl.edu	37	1	167666434	167666434	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052862.3	+1	validated	p.E191	0.000	65	0%	147	36.7%	1	0%	-	-	-	NULL
ADCY10	55811	genome.wustl.edu	37	1	167802308	167802308	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018417.4	-1	reviewed	p.I1170	0.899	227	0.4%	360	28.1%	0	-	-	-	-	superfamily_TPR-like
ADCY10	55811	genome.wustl.edu	37	1	167815319	167815319	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018417.4	-1	reviewed	p.R874W	0.502	80	0%	115	37.4%	0	-	probably_damaging(0.992)	deleterious(0.02)	deleterious(0.831)	NULL
ADCY10	55811	genome.wustl.edu	37	1	167815357	167815357	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018417.4	-1	reviewed	p.L861P	1.000	81	0%	138	34.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ADCY10	55811	genome.wustl.edu	37	1	167830176	167830176	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018417.4	-1	reviewed	p.R581Q	0.026	378	0%	595	32.3%	0	-	benign(0.001)	tolerated(0.34)	neutral(0.023)	NULL
BRP44	25874	genome.wustl.edu	37	1	167889261	167889261	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143674.1	-1	validated	p.F101L	1.000	74	0%	113	25.7%	96	34.3%	benign(0.001)	tolerated(1)	-	HMMPfam_UPF0041
DCAF6	55827	genome.wustl.edu	37	1	167921041	167921041	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018442.2	+1	validated	p.R34I	1.000	92	0%	104	31.7%	6	0%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
DCAF6	55827	genome.wustl.edu	37	1	167921046	167921046	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018442.2	+1	validated	p.E36K	1.000	94	0%	115	33%	6	66.6%	probably_damaging(0.99)	tolerated(0.06)	deleterious(0.764)	NULL
TBX19	9095	genome.wustl.edu	37	1	168266966	168266966	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005149.2	+1	reviewed	p.T203M	1.000	201	0%	309	31.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_T-box,HMMSmart_TBOX,superfamily_P53_like_DNA_bnd
XCL2	6846	genome.wustl.edu	37	1	168510297	168510297	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003175.3	-1	validated	p.V80M	0.002	436	0%	465	36.6%	1	0%	benign(0.003)	tolerated(0.21)	neutral(0.044)	HMMPfam_IL8,HMMSmart_SCY,superfamily_Chemokine_IL8
XCL2	6846	genome.wustl.edu	37	1	168511245	168511245	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003175.3	-1	validated	p.S54	0.997	178	0.6%	179	36.3%	3	33.3%	-	-	-	HMMPfam_IL8,HMMSmart_SCY,superfamily_Chemokine_IL8
ATP1B1	481	genome.wustl.edu	37	1	169080697	169080697	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001677.3	+1	reviewed	p.E63*	1.000	174	0%	198	28.8%	62	8%	-	-	-	HMMPfam_Na_K-ATPase
BLZF1	8548	genome.wustl.edu	37	1	169346071	169346071	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003666.2	+1	validated	p.E108*	1.000	155	0%	91	36.3%	3	0%	-	-	-	NULL
BLZF1	8548	genome.wustl.edu	37	1	169347574	169347574	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003666.2	+1	validated	p.R159C	1.000	231	0%	149	28.2%	2	50%	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	NULL
BLZF1	8548	genome.wustl.edu	37	1	169351462	169351462	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003666.2	+1	validated	p.K320N	0.990	129	0%	128	35.2%	4	75%	benign(0.201)	deleterious(0.02)	neutral(0.402)	NULL
F5	2153	genome.wustl.edu	37	1	169495154	169495154	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000130.4	-1	reviewed	p.L1901I	0.987	200	0.5%	148	36.5%	0	-	probably_damaging(0.985)	deleterious(0.02)	deleterious(0.815)	superfamily_Cupredoxins
F5	2153	genome.wustl.edu	37	1	169498849	169498849	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000130.4	-1	reviewed	p.H1806N	1.000	191	0%	189	31.7%	0	-	benign(0.379)	deleterious(0)	deleterious(0.566)	superfamily_Cupredoxins
F5	2153	genome.wustl.edu	37	1	169510579	169510579	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000130.4	-1	reviewed	p.S1250Y	0.001	614	0%	836	33%	0	-	possibly_damaging(0.926)	deleterious(0)	deleterious(0.819)	HMMPfam_LSPR
F5	2153	genome.wustl.edu	37	1	169511252	169511252	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000130.4	-1	reviewed	p.L1026I	0.000	129	0%	153	31.4%	0	-	benign(0.4)	tolerated(0.26)	neutral(0.163)	NULL
F5	2153	genome.wustl.edu	37	1	169519911	169519911	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000130.4	-1	reviewed	p.Y455H	0.019	161	0%	248	30.6%	0	-	possibly_damaging(0.902)	tolerated(0.07)	deleterious(0.676)	superfamily_Cupredoxins
F5	2153	genome.wustl.edu	37	1	169524494	169524494	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000130.4	-1	reviewed	p.K348N	0.628	277	0%	293	23.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Cupredoxins
SELP	6403	genome.wustl.edu	37	1	169581523	169581523	+	Nonsense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003005.3	-1	reviewed	p.L298*	0.001	116	0%	145	33.8%	1	0%	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
METTL18	92342	genome.wustl.edu	37	1	169762116	169762116	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033418.1	-1	provisional	p.E241*	0.745	202	0%	296	26.7%	14	42.8%	-	-	-	HMMPfam_Methyltransf_16,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
METTL18	92342	genome.wustl.edu	37	1	169762201	169762201	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033418.1	-1	provisional	p.E212D	1.000	144	0%	158	31%	15	40%	probably_damaging(0.963)	tolerated(0.26)	neutral(0.440)	HMMPfam_Methyltransf_16,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
C1orf112	55732	genome.wustl.edu	37	1	169801601	169801601	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018186.2	+1	predicted	p.S498L	0.514	259	0%	297	32%	12	41.6%	possibly_damaging(0.654)	tolerated(0.23)	neutral(0.272)	NULL
SCYL3	57147	genome.wustl.edu	37	1	169836109	169836109	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181093.2	-1	validated	p.D248A	1.000	156	0%	153	28.8%	2	50%	probably_damaging(0.971)	deleterious(0.01)	deleterious(0.819)	superfamily_ARM repeat
KIFAP3	22920	genome.wustl.edu	37	1	169947281	169947281	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014970.2	-1	reviewed	p.V614	1.000	279	0%	209	36.8%	2	0%	-	-	-	HMMSmart_SM00185,HMMPfam_KAP,superfamily_ARM repeat
KIFAP3	22920	genome.wustl.edu	37	1	169951125	169951125	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014970.2	-1	reviewed	p.E596*	1.000	171	0%	194	32.5%	3	33.3%	-	-	-	HMMSmart_SM00185,HMMPfam_KAP,superfamily_ARM repeat
KIFAP3	22920	genome.wustl.edu	37	1	169951979	169951979	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014970.2	-1	reviewed	p.I512	0.939	119	0%	91	38.5%	3	0%	-	-	-	HMMPfam_KAP,superfamily_ARM repeat
KIFAP3	22920	genome.wustl.edu	37	1	170003537	170003537	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014970.2	-1	reviewed	p.E240*	1.000	225	0%	195	27.2%	2	0%	-	-	-	HMMPfam_KAP,superfamily_ARM repeat
PRRX1	5396	genome.wustl.edu	37	1	170695426	170695426	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022716.2	+1	reviewed	p.N161	0.553	97	0%	93	33.3%	16	25%	-	-	-	superfamily_Homeodomain-like
LOC646804	646804	genome.wustl.edu	37	1	171052720	171052720	+	Missense_Mutation	SNP	G	G	A	rs34945871		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_929761.3	+1	model	p.A30T	1.000	67	0%	50	24%	0	-	-	-	-	NULL
FMO3	2328	genome.wustl.edu	37	1	171073019	171073019	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002294.2	+1	reviewed	p.D76N	0.980	273	0.4%	296	41.6%	0	-	probably_damaging(0.979)	deleterious(0.02)	deleterious(0.805)	HMMPfam_FMO-like,superfamily_FAD/NAD(P)-binding domain
FMO1	2326	genome.wustl.edu	37	1	171227237	171227237	+	Missense_Mutation	SNP	G	G	A	rs182525482	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002021.1	+1	reviewed	p.R4Q	0.243	105	0%	154	40.3%	0	-	probably_damaging(0.96)	tolerated(0.07)	deleterious(0.722)	HMMPfam_FMO-like,superfamily_FAD/NAD(P)-binding domain
PRRC2C	23215	genome.wustl.edu	37	1	171482143	171482143	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015172.3	+1	validated	p.R39Q	1.000	142	0%	167	29.3%	5	20%	unknown(0)	-	-	HMMPfam_BAT2_N
PRRC2C	23215	genome.wustl.edu	37	1	171511038	171511038	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015172.3	+1	validated	p.S1476F	1.000	53	0%	85	35.3%	14	64.2%	unknown(0)	-	-	NULL
PRRC2C	23215	genome.wustl.edu	37	1	171544202	171544202	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015172.3	+1	validated	p.S2295L	0.953	231	0%	321	29.9%	18	22.2%	probably_damaging(0.998)	-	-	NULL
DNM3	26052	genome.wustl.edu	37	1	172100371	172100371	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015569.3	+1	validated	p.S534	0.196	235	0%	163	44.2%	3	33.3%	-	-	-	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
C1orf9	51430	genome.wustl.edu	37	1	172526430	172526430	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014283.3	+1	validated	p.K152Q	1.000	129	0%	108	42.6%	1	0%	benign(0.288)	deleterious(0.01)	deleterious(0.494)	NULL
C1orf9	51430	genome.wustl.edu	37	1	172526506	172526506	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014283.3	+1	validated	p.L177R	0.003	153	0%	146	32.9%	0	-	possibly_damaging(0.929)	tolerated(0.21)	neutral(0.420)	NULL
FASLG	356	genome.wustl.edu	37	1	172628400	172628400	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000639.1	+1	reviewed	p.S20N	0.068	118	0%	95	24.2%	2	0%	benign(0)	deleterious(0.03)	neutral(0.364)	NULL
TNFSF18	8995	genome.wustl.edu	37	1	173010566	173010566	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005092.3	-1	reviewed	p.L181I	0.024	247	0%	205	32.2%	0	-	benign(0.014)	tolerated(0.32)	neutral(0.025)	HMMPfam_TNF,superfamily_TNF_like
TNFSF18	8995	genome.wustl.edu	37	1	173019892	173019892	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005092.3	-1	reviewed	p.L71I	0.000	118	0%	134	33.6%	0	-	benign(0.158)	tolerated(0.21)	neutral(0.058)	superfamily_TNF_like
LOC646870	646870	genome.wustl.edu	37	1	173332578	173332578	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_040282.2	-1	model	NULL	0.034	35	0%	32	40.6%	0	-	-	-	-	-
SLC9A11	284525	genome.wustl.edu	37	1	173490467	173490467	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178527.3	-1	validated	p.I904	1.000	112	0%	101	31.7%	0	-	-	-	-	HMMPfam_cNMP_binding,HMMSmart_cNMP,superfamily_cNMP_binding
ANKRD45	339416	genome.wustl.edu	37	1	173628341	173628341	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198493.2	-1	validated	p.E73*	1.000	211	0%	232	37.9%	2	50%	-	-	-	superfamily_Ankyrin repeat
KLHL20	27252	genome.wustl.edu	37	1	173702952	173702952	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014458.3	+1	reviewed	p.R42C	1.000	109	0%	258	40.7%	4	50%	benign(0.008)	tolerated(0.19)	neutral(0.050)	NULL
CENPL	91687	genome.wustl.edu	37	1	173772301	173772301	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127181.2	-1	validated	p.A301T	1.000	119	0%	196	29.1%	5	40%	probably_damaging(0.956)	tolerated(0.3)	neutral(0.428)	NULL
SERPINC1	462	genome.wustl.edu	37	1	173879960	173879960	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000488.3	-1	reviewed	p.D232N	0.940	244	0.4%	344	30.8%	0	-	benign(0.001)	tolerated(0.43)	neutral(0.013)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
GPR52	9293	genome.wustl.edu	37	1	174417933	174417933	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005684.4	+1	validated	p.K228N	1.000	327	0%	399	32.8%	0	-	possibly_damaging(0.472)	tolerated(0.11)	neutral(0.427)	HMMPfam_7tm_1,superfamily_SSF81321
TNR	7143	genome.wustl.edu	37	1	175335159	175335159	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003285.2	-1	validated	p.S723	0.997	286	0%	371	34.5%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
TNR	7143	genome.wustl.edu	37	1	175362990	175362990	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003285.2	-1	validated	p.E428*	1.000	182	0%	272	29.4%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
TNR	7143	genome.wustl.edu	37	1	175365747	175365747	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000422274	-1	known	p.Q116*	1.000	166	0%	169	28.4%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
TNR	7143	genome.wustl.edu	37	1	175365922	175365922	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003285.2	-1	validated	p.R333Q	1.000	53	0%	51	41.2%	0	-	probably_damaging(0.995)	tolerated(0.18)	deleterious(0.514)	HMMPfam_fn3,HMMSmart_SM00060
TNR	7143	genome.wustl.edu	37	1	175372559	175372559	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003285.2	-1	validated	p.S231	0.000	92	0%	122	41%	0	-	-	-	-	HMMSmart_SM00181,superfamily_EGF/Laminin
PAPPA2	60676	genome.wustl.edu	37	1	176526251	176526251	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020318.2	+1	validated	p.F265L	1.000	86	0%	93	39.8%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_Concanavalin A-like lectins/glucanases
PAPPA2	60676	genome.wustl.edu	37	1	176760543	176760543	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020318.2	+1	validated	p.L1649M	0.999	191	0%	231	40.7%	0	-	possibly_damaging(0.76)	tolerated(0.29)	neutral(0.310)	superfamily_Complement control module/SCR domain
FAM5B	57795	genome.wustl.edu	37	1	177250258	177250258	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021165.2	+1	provisional	p.R649Q	1.000	50	0%	88	38.6%	3	33.3%	possibly_damaging(0.867)	deleterious(0.01)	deleterious(0.742)	NULL
SEC16B	89866	genome.wustl.edu	37	1	177909803	177909803	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033127.2	-1	validated	p.R690H	0.000	163	0%	164	30.5%	1	0%	probably_damaging(0.994)	tolerated(0.13)	deleterious(0.705)	NULL
RASAL2	9462	genome.wustl.edu	37	1	178410759	178410759	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170692.2	+1	reviewed	p.R284C	0.980	177	0%	171	29.8%	3	33.3%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMSmart_PH,superfamily_C2_CaLB,superfamily_SSF50729
RASAL2	9462	genome.wustl.edu	37	1	178421561	178421561	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170692.2	+1	reviewed	p.R577C	1.000	232	0%	211	31.8%	6	33.3%	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	HMMPfam_RasGAP,HMMSmart_RasGAP,superfamily_Rho_GAP
RALGPS2	55103	genome.wustl.edu	37	1	178846735	178846735	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152663.3	+1	validated	p.R237Q	1.000	165	0%	157	25.5%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00147,superfamily_Ras GEF
ABL2	27	genome.wustl.edu	37	1	179076972	179076972	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007314.3	-1	reviewed	p.E1144K	1.000	84	0%	124	34.7%	4	75%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_F_actin_bind,HMMSmart_SM00808
ABL2	27	genome.wustl.edu	37	1	179078479	179078479	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007314.3	-1	reviewed	p.E641D	1.000	158	0%	223	38.6%	2	100%	benign(0.105)	tolerated(0.39)	neutral(0.024)	NULL
ABL2	27	genome.wustl.edu	37	1	179100575	179100575	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007314.3	-1	reviewed	p.A88T	1.000	88	0%	161	34.8%	2	0%	benign(0.355)	deleterious(0.03)	deleterious(0.477)	NULL
AXDND1	126859	genome.wustl.edu	37	1	179363127	179363127	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144696.4	+1	validated	p.R318H	1.000	151	0%	222	29.7%	0	-	unknown(0)	deleterious(0.01)	-	NULL
AXDND1	126859	genome.wustl.edu	37	1	179363138	179363138	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144696.4	+1	validated	p.E322*	1.000	149	0%	215	30.2%	0	-	-	-	-	NULL
AXDND1	126859	genome.wustl.edu	37	1	179364258	179364258	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144696.4	+1	validated	p.D344N	1.000	131	0%	131	34.4%	0	-	unknown(0)	deleterious(0.04)	-	NULL
AXDND1	126859	genome.wustl.edu	37	1	179414309	179414309	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144696.4	+1	validated	p.E590*	1.000	91	0%	156	35.3%	0	-	-	-	-	NULL
AXDND1	126859	genome.wustl.edu	37	1	179497498	179497498	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144696.4	+1	validated	p.R883*	0.868	162	0%	230	30.4%	0	-	-	-	-	NULL
NPHS2	7827	genome.wustl.edu	37	1	179520390	179520390	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014625.2	-1	reviewed	p.T357N	0.094	86	0%	77	41.6%	0	-	possibly_damaging(0.925)	tolerated(0.51)	neutral(0.383)	NULL
TDRD5	163589	genome.wustl.edu	37	1	179604960	179604960	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173533.2	+1	provisional	p.F486L	1.000	157	0%	170	35.3%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_TUDOR
TDRD5	163589	genome.wustl.edu	37	1	179609046	179609046	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173533.2	+1	provisional	p.L531	1.000	249	0.4%	318	32.7%	0	-	-	-	-	HMMSmart_SM00333,HMMPfam_TUDOR,superfamily_Tudor/PWWP/MBT
TOR1AIP1	26092	genome.wustl.edu	37	1	179851954	179851954	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015602.2	+1	validated	p.L106P	1.000	51	0%	78	29.5%	11	27.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CEP350	9857	genome.wustl.edu	37	1	180010367	180010367	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014810.4	+1	reviewed	p.R1402Q	0.999	79	0%	98	35.7%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CEP350	9857	genome.wustl.edu	37	1	180012229	180012229	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000418229	+1	known	p.R76C	0.222	244	0%	337	27.6%	3	33.3%	-	-	-	NULL
ACBD6	84320	genome.wustl.edu	37	1	180257586	180257586	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032360.3	-1	validated	p.R254Q	0.998	94	0%	132	31.8%	78	34.6%	benign(0.006)	tolerated(0.31)	neutral(0.027)	HMMPfam_Ank,superfamily_ANK
XPR1	9213	genome.wustl.edu	37	1	180775262	180775262	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004736.3	+1	validated	p.R171H	1.000	119	0%	156	35.9%	9	55.5%	probably_damaging(0.953)	tolerated(0.52)	neutral(0.405)	HMMPfam_SPX
CACNA1E	777	genome.wustl.edu	37	1	181480509	181480509	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000721.2	+1	reviewed	p.E125	1.000	262	0%	359	34.8%	1	0%	-	-	-	superfamily_Voltage-gated potassium channels
CACNA1E	777	genome.wustl.edu	37	1	181690998	181690998	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000721.2	+1	reviewed	p.T687	0.992	259	0%	255	29.8%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1E	777	genome.wustl.edu	37	1	181702016	181702016	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000721.2	+1	reviewed	p.E932K	1.000	43	0%	60	30%	0	-	probably_damaging(0.968)	deleterious(0.05)	deleterious(0.755)	NULL
CACNA1E	777	genome.wustl.edu	37	1	181724382	181724382	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000721.2	+1	reviewed	p.D1280N	1.000	194	0%	253	32%	1	100%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1E	777	genome.wustl.edu	37	1	181726160	181726160	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000721.2	+1	reviewed	p.V1409	1.000	467	0%	541	29.2%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1E	777	genome.wustl.edu	37	1	181764045	181764045	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000721.2	+1	reviewed	p.R1982W	1.000	128	0%	134	27.6%	0	-	probably_damaging(0.994)	deleterious(0.02)	deleterious(0.835)	NULL
CACNA1E	777	genome.wustl.edu	37	1	181764046	181764046	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000721.2	+1	reviewed	p.R1982Q	1.000	130	0%	137	40.9%	0	-	possibly_damaging(0.758)	tolerated(0.59)	neutral(0.285)	NULL
CACNA1E	777	genome.wustl.edu	37	1	181767563	181767563	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000721.2	+1	reviewed	p.A2136T	0.000	96	0%	105	28.6%	1	0%	benign(0.002)	tolerated(0.43)	neutral(0.013)	NULL
ZNF648	127665	genome.wustl.edu	37	1	182026715	182026715	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009992.1	-1	provisional	p.R144Q	0.003	96	0%	148	43.9%	0	-	benign(0.015)	deleterious(0.01)	neutral(0.406)	NULL
LOC100130996	100130996	genome.wustl.edu	37	1	182151959	182151959	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001726581.1	-1	model	p.D111Y	1.000	23	0%	32	34.4%	0	-	-	-	-	HMMPfam_Yippee
RGSL1	353299	genome.wustl.edu	37	1	182522672	182522672	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001137669.1	+1	validated	p.Q1042H	0.001	225	0%	309	36.9%	0	-	-	-	-	NULL
RGS16	6004	genome.wustl.edu	37	1	182569515	182569515	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002928.3	-1	reviewed	p.S174L	1.000	90	0%	119	38.7%	4	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RGS,HMMSmart_SM00315,superfamily_Regulator of G-protein signaling RGS
SHCBP1L	81626	genome.wustl.edu	37	1	182869170	182869170	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030933.2	-1	validated	p.N637T	0.988	272	0%	343	34.4%	0	-	benign(0.009)	tolerated(0.06)	neutral(0.323)	superfamily_Pectin_lyas_like
LAMC2	3918	genome.wustl.edu	37	1	183177131	183177131	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005562.2	+1	reviewed	p.C65	0.985	107	0%	157	30.6%	5	100%	-	-	-	HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,superfamily_EGF/Laminin
LAMC2	3918	genome.wustl.edu	37	1	183194760	183194760	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005562.2	+1	reviewed	p.S324I	1.000	125	0%	152	31.6%	11	81.8%	possibly_damaging(0.906)	deleterious(0.03)	deleterious(0.724)	HMMPfam_Laminin_B,HMMSmart_SM00281
LAMC2	3918	genome.wustl.edu	37	1	183203501	183203501	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005562.2	+1	reviewed	e15-1	0.898	266	0%	382	33.2%	0	-	-	-	-	-
SMG7	9887	genome.wustl.edu	37	1	183514264	183514264	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000515829	+1	known	p.E432*	1.000	354	0.3%	435	30.8%	19	42.1%	benign(0)	tolerated(0.29)	neutral(0.029)	NULL
ARPC5	10092	genome.wustl.edu	37	1	183596680	183596680	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005717.2	-1	reviewed	p.R148I	1.000	146	0%	249	35.3%	82	37.8%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_P16-Arc,superfamily_Arp2/3 complex 16 kDa subunit ARPC5
RGL1	23179	genome.wustl.edu	37	1	183861233	183861233	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015149.3	+1	validated	p.E395*	1.000	272	0%	200	26%	0	-	-	-	-	HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF
GLT25D2	23127	genome.wustl.edu	37	1	183933069	183933069	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015101.2	-1	validated	p.I306	0.004	212	0%	189	31.2%	0	-	-	-	-	NULL
GLT25D2	23127	genome.wustl.edu	37	1	183938571	183938571	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015101.2	-1	validated	p.R222*	0.749	154	0%	140	23.6%	0	-	-	-	-	NULL
SWT1	54823	genome.wustl.edu	37	1	185137512	185137512	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105518.1	+1	validated	p.R69I	0.994	179	0%	172	39%	0	-	benign(0.418)	deleterious(0)	deleterious(0.580)	NULL
HMCN1	83872	genome.wustl.edu	37	1	185891513	185891513	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031935.2	+1	reviewed	p.T301	0.964	115	0%	86	29.1%	1	100%	-	-	-	NULL
HMCN1	83872	genome.wustl.edu	37	1	185902825	185902825	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031935.2	+1	reviewed	p.A566V	0.858	185	0.5%	163	34.4%	1	100%	benign(0.001)	tolerated(0.21)	neutral(0.044)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HMCN1	83872	genome.wustl.edu	37	1	185969257	185969257	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031935.2	+1	reviewed	p.D1319Y	1.000	177	0%	118	34.7%	0	-	possibly_damaging(0.948)	tolerated(0.15)	deleterious(0.632)	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HMCN1	83872	genome.wustl.edu	37	1	185984467	185984467	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031935.2	+1	reviewed	p.L1603I	1.000	147	0%	102	33.3%	0	-	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HMCN1	83872	genome.wustl.edu	37	1	185985349	185985349	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031935.2	+1	reviewed	p.I1723	1.000	119	0%	94	28.7%	1	0%	-	-	-	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HMCN1	83872	genome.wustl.edu	37	1	186039812	186039812	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031935.2	+1	reviewed	p.V2688L	1.000	218	0%	178	26.4%	0	-	possibly_damaging(0.663)	deleterious(0.04)	deleterious(0.583)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
HMCN1	83872	genome.wustl.edu	37	1	186135349	186135349	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031935.2	+1	reviewed	p.S5118F	1.000	125	0%	121	36.4%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_CA,superfamily_EGF/Laminin
TPR	7175	genome.wustl.edu	37	1	186328956	186328956	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003292.2	-1	reviewed	p.S455F	1.000	341	0%	307	37.8%	4	50%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
PTGS2	5743	genome.wustl.edu	37	1	186644428	186644428	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000963.2	-1	reviewed	p.R453L	1.000	164	0%	203	27.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases
PLA2G4A	5321	genome.wustl.edu	37	1	186957600	186957600	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024420.2	+1	reviewed	p.R737I	0.997	173	0%	191	19.4%	26	30.7%	possibly_damaging(0.455)	deleterious(0.01)	deleterious(0.554)	NULL
FAM5C	339479	genome.wustl.edu	37	1	190067555	190067555	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199051.1	-1	provisional	p.R632C	1.000	233	0%	288	25.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FAM5C	339479	genome.wustl.edu	37	1	190067781	190067781	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199051.1	-1	provisional	p.Q556	1.000	125	0%	178	28.1%	0	-	-	-	-	NULL
RGS13	6003	genome.wustl.edu	37	1	192627357	192627357	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002927.3	+1	reviewed	p.L52	1.000	156	0%	134	41%	0	-	-	-	-	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam
RGS13	6003	genome.wustl.edu	37	1	192628484	192628484	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002927.3	+1	reviewed	p.S104L	0.659	158	0%	111	35.1%	0	-	benign(0)	tolerated(0.67)	neutral(0.003)	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam
RGS2	5997	genome.wustl.edu	37	1	192779335	192779335	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002923.3	+1	reviewed	p.Q50	1.000	147	0%	150	31.3%	14	0%	-	-	-	NULL
CDC73	79577	genome.wustl.edu	37	1	193104712	193104712	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024529.4	+1	reviewed	p.R139Q	1.000	144	0%	159	37.7%	15	60%	benign(0.183)	deleterious(0.01)	neutral(0.423)	NULL
B3GALT2	8707	genome.wustl.edu	37	1	193150455	193150455	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003783.3	-1	reviewed	p.R80W	0.986	283	0.4%	377	34.7%	2	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
CDC73	79577	genome.wustl.edu	37	1	193205402	193205402	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024529.4	+1	reviewed	p.V445I	1.000	279	0%	446	32.5%	17	17.6%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	HMMPfam_CDC73
CDC73	79577	genome.wustl.edu	37	1	193218934	193218934	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024529.4	+1	reviewed	p.E498*	1.000	186	0%	156	34%	26	11.5%	-	-	-	HMMPfam_CDC73
KCNT2	343450	genome.wustl.edu	37	1	196295908	196295908	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198503.2	-1	validated	p.L739I	1.000	269	0.4%	131	23.7%	0	-	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	NULL
CFH	3075	genome.wustl.edu	37	1	196684755	196684755	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000186.3	+1	reviewed	p.R518G	0.565	304	0%	188	32.4%	3	0%	benign(0.278)	tolerated(0.39)	neutral(0.046)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CFHR2	3080	genome.wustl.edu	37	1	196918623	196918623	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005666.2	+1	validated	p.L33I	0.000	236	0%	190	35.8%	0	-	possibly_damaging(0.927)	tolerated(0.33)	neutral(0.399)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CFHR2	3080	genome.wustl.edu	37	1	196927122	196927122	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005666.2	+1	validated	p.C178R	0.985	336	0%	360	31.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CFHR5	81494	genome.wustl.edu	37	1	196967283	196967283	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030787.3	+1	reviewed	p.K332N	0.000	81	0%	51	25.5%	0	-	benign(0.382)	tolerated(0.17)	neutral(0.181)	HMMSmart_CCP,superfamily_Complement_control_module
CFHR5	81494	genome.wustl.edu	37	1	196977752	196977752	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030787.3	+1	reviewed	p.S550*	0.000	115	0%	246	33.3%	0	-	-	-	-	HMMSmart_CCP,superfamily_Complement_control_module
F13B	2165	genome.wustl.edu	37	1	197029665	197029665	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001994.2	-1	reviewed	p.K212	0.001	59	0%	31	25.8%	0	-	-	-	-	superfamily_Complement_control_module
F13B	2165	genome.wustl.edu	37	1	197030087	197030087	+	Missense_Mutation	SNP	C	C	A	rs17514253	byCluster;byFrequency;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001994.2	-1	reviewed	p.K190N	0.000	293	0%	188	30.9%	0	-	benign(0)	tolerated(0.27)	neutral(0.034)	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
F13B	2165	genome.wustl.edu	37	1	197032028	197032028	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001994.2	-1	reviewed	p.T75M	0.000	213	0%	122	10.7%	0	-	benign(0.257)	tolerated(0.11)	neutral(0.298)	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
ASPM	259266	genome.wustl.edu	37	1	197059510	197059510	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018136.4	-1	reviewed	p.W3215*	1.000	123	0%	77	40.3%	6	33.3%	-	-	-	HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases
ASPM	259266	genome.wustl.edu	37	1	197065162	197065162	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018136.4	-1	reviewed	p.Q2985K	0.432	280	0.4%	81	32.1%	4	50%	benign(0.199)	tolerated(0.09)	neutral(0.316)	superfamily_P-loop containing nucleoside triphosphate hydrolases
ASPM	259266	genome.wustl.edu	37	1	197111537	197111537	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018136.4	-1	reviewed	p.K615N	0.000	403	0%	460	30%	1	0%	possibly_damaging(0.816)	deleterious(0.05)	deleterious(0.654)	NULL
ZBTB41	360023	genome.wustl.edu	37	1	197128560	197128560	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194314.2	-1	validated	p.L887I	1.000	240	0%	242	26.4%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ZBTB41	360023	genome.wustl.edu	37	1	197168840	197168840	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194314.2	-1	validated	p.R255M	1.000	102	0%	106	27.4%	1	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ZBTB41	360023	genome.wustl.edu	37	1	197169075	197169075	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194314.2	-1	validated	p.E177K	1.000	136	0%	140	23.6%	1	0%	possibly_damaging(0.722)	deleterious(0)	deleterious(0.707)	HMMSmart_SM00225,HMMPfam_BTB
CRB1	23418	genome.wustl.edu	37	1	197325986	197325986	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201253.1	+1	reviewed	p.I338	0.012	214	0%	286	31.5%	0	-	-	-	-	superfamily_EGF/Laminin
CRB1	23418	genome.wustl.edu	37	1	197390438	197390438	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201253.1	+1	reviewed	p.L494M	1.000	207	0%	237	30%	0	-	probably_damaging(0.998)	tolerated(0.11)	deleterious(0.746)	superfamily_Concanavalin A-like lectins/glucanases
CRB1	23418	genome.wustl.edu	37	1	197390708	197390708	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201253.1	+1	reviewed	p.D584N	0.793	146	0%	152	32.2%	0	-	probably_damaging(0.978)	tolerated(1)	neutral(0.420)	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
CRB1	23418	genome.wustl.edu	37	1	197390950	197390950	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201253.1	+1	reviewed	p.L664F	0.000	103	0%	145	37.2%	0	-	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
CRB1	23418	genome.wustl.edu	37	1	197404224	197404224	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201253.1	+1	reviewed	p.N1077	0.030	99	0%	50	52%	0	-	-	-	-	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
CRB1	23418	genome.wustl.edu	37	1	197404299	197404299	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201253.1	+1	reviewed	p.I1102	0.053	89	0%	57	33.3%	0	-	-	-	-	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
CRB1	23418	genome.wustl.edu	37	1	197404472	197404472	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201253.1	+1	reviewed	p.S1160F	0.324	147	0%	139	26.6%	0	-	probably_damaging(0.956)	tolerated(0.08)	deleterious(0.700)	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_EGF/Laminin
NR5A2	2494	genome.wustl.edu	37	1	199997028	199997028	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_205860.1	+1	validated	p.L18R	0.001	199	0%	321	37.1%	1	0%	unknown(0)	-	-	NULL
NR5A2	2494	genome.wustl.edu	37	1	200012948	200012948	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000367357	+1	known	p.K4R	0.933	248	0%	398	33.9%	1	0%	-	-	-	HMMSmart_SM00399
NR5A2	2494	genome.wustl.edu	37	1	200014653	200014653	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000367357	+1	known	p.E56*	1.000	229	0%	260	32.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C4,HMMSmart_SM00399,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
NR5A2	2494	genome.wustl.edu	37	1	200017844	200017844	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000367357	+1	known	p.T257M	0.549	132	0%	225	36%	0	-	-	-	-	superfamily_Nuclear receptor ligand-binding domain
FAM58BP	339521	genome.wustl.edu	37	1	200182759	200182759	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105517.1	+1	provisional	p.A23V	0.010	89	0%	119	37%	0	-	-	-	-	NULL
ZNF281	23528	genome.wustl.edu	37	1	200376450	200376450	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012482.3	-1	provisional	p.K795R	1.000	111	0%	128	35.2%	4	50%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
ZNF281	23528	genome.wustl.edu	37	1	200377797	200377797	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012482.3	-1	provisional	p.K346T	0.926	171	0%	295	33.2%	2	0%	benign(0.003)	deleterious(0.02)	neutral(0.383)	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667
KIF14	9928	genome.wustl.edu	37	1	200583445	200583445	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014875.2	-1	validated	e3+1	1.000	138	0%	180	36.1%	0	-	-	-	-	-
CAMSAP2	23271	genome.wustl.edu	37	1	200709079	200709079	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203459.1	+1	validated	p.K42E	1.000	91	1.1%	161	39.1%	2	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
C1orf106	55765	genome.wustl.edu	37	1	200860715	200860715	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018265.2	+1	validated	p.G16D	0.000	39	0%	82	31.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
KIF21B	23046	genome.wustl.edu	37	1	200957632	200957632	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017596.2	-1	provisional	p.F1113L	1.000	17	0%	39	30.8%	0	-	possibly_damaging(0.738)	tolerated(0.32)	neutral(0.294)	superfamily_WD40_like
KIF21B	23046	genome.wustl.edu	37	1	200967660	200967660	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017596.2	-1	provisional	p.I643	0.807	91	0%	134	28.4%	0	-	-	-	-	superfamily_WD40_like
CACNA1S	779	genome.wustl.edu	37	1	201017715	201017715	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000069.2	-1	reviewed	p.T1479M	1.000	106	0%	171	36.8%	0	-	probably_damaging(1)	tolerated(0.26)	deleterious(0.534)	NULL
CACNA1S	779	genome.wustl.edu	37	1	201029842	201029842	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000069.2	-1	reviewed	p.F1120V	1.000	258	0%	379	34.3%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_SSF81324
CACNA1S	779	genome.wustl.edu	37	1	201031634	201031634	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000069.2	-1	reviewed	p.F954L	1.000	195	0%	289	30.8%	0	-	benign(0.012)	tolerated(0.14)	neutral(0.250)	HMMPfam_Ion_trans,superfamily_SSF81324
CACNA1S	779	genome.wustl.edu	37	1	201038317	201038317	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000069.2	-1	reviewed	p.K833T	0.993	63	0%	104	28.8%	0	-	benign(0)	tolerated(0.46)	neutral(0.012)	superfamily_SSF81324
CACNA1S	779	genome.wustl.edu	37	1	201063117	201063117	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000069.2	-1	reviewed	p.F97L	1.000	93	0%	120	24.2%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Ion_trans,superfamily_SSF81324
TMEM9	252839	genome.wustl.edu	37	1	201104814	201104814	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016456.3	-1	validated	p.D177N	1.000	46	0%	87	35.6%	291	39.5%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_Tmemb_9
PKP1	5317	genome.wustl.edu	37	1	201263172	201263172	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000299.2	+1	reviewed	p.P102L	1.000	141	0%	189	32.3%	3	66.6%	benign(0.156)	deleterious(0.01)	neutral(0.420)	NULL
PKP1	5317	genome.wustl.edu	37	1	201282534	201282534	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000299.2	+1	reviewed	p.R183C	1.000	79	0%	77	36.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
TNNI1	7135	genome.wustl.edu	37	1	201379468	201379468	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003281.3	-1	reviewed	p.P184	0.009	190	0%	262	36.6%	0	-	-	-	-	NULL
NAV1	89796	genome.wustl.edu	37	1	201777084	201777084	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020443.4	+1	reviewed	p.R1215*	0.997	163	0%	276	27.5%	0	-	-	-	-	NULL
IPO9	55705	genome.wustl.edu	37	1	201822152	201822152	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018085.4	+1	validated	p.R206Q	1.000	294	0%	437	34.1%	20	35%	probably_damaging(0.964)	deleterious(0.03)	deleterious(0.771)	superfamily_ARM repeat
IPO9	55705	genome.wustl.edu	37	1	201844032	201844032	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018085.4	+1	validated	p.L969H	1.000	275	0%	484	31.6%	69	42%	benign(0.11)	tolerated(0.52)	neutral(0.017)	superfamily_ARM repeat
LMOD1	25802	genome.wustl.edu	37	1	201869822	201869822	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012134.2	-1	reviewed	p.D107Y	0.766	143	0%	181	37%	14	0%	probably_damaging(0.993)	deleterious(0.03)	deleterious(0.815)	HMMPfam_Tropomodulin
TIMM17A	10440	genome.wustl.edu	37	1	201938669	201938669	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006335.2	+1	validated	p.R168Q	1.000	181	0%	342	31%	105	38%	benign(0.001)	tolerated(1)	-	NULL
PTPN7	5778	genome.wustl.edu	37	1	202124717	202124717	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080588.1	-1	reviewed	p.L177I	1.000	79	1.3%	149	36.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
PTPN7	5778	genome.wustl.edu	37	1	202124738	202124738	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080588.1	-1	reviewed	e4-1	1.000	70	0%	124	37.1%	0	-	-	-	-	-
PPP1R12B	4660	genome.wustl.edu	37	1	202396178	202396178	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000466968	+1	known	p.S33*	1.000	370	0%	612	32.5%	1	0%	benign(0.034)	tolerated(0.21)	neutral(0.046)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
KLHL12	59349	genome.wustl.edu	37	1	202866074	202866074	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021633.2	-1	provisional	p.L283I	1.000	104	0%	170	33.5%	4	25%	possibly_damaging(0.788)	tolerated(0.12)	deleterious(0.555)	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central
CHIT1	1118	genome.wustl.edu	37	1	203188426	203188426	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003465.2	-1	reviewed	p.R316I	0.985	199	0%	215	37.7%	1	0%	benign(0.054)	tolerated(0.14)	neutral(0.253)	HMMPfam_Glyco_hydro_18,HMMSmart_SM00636,superfamily_(Trans)glycosidases,superfamily_Chitinase insertion domain
FMOD	2331	genome.wustl.edu	37	1	203316638	203316638	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002023.3	-1	reviewed	p.N254I	1.000	115	0%	180	34.4%	11	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF52058
OPTC	26254	genome.wustl.edu	37	1	203472713	203472713	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014359.3	+1	reviewed	p.F288	1.000	46	0%	80	25%	0	-	-	-	-	superfamily_SSF52058
ATP2B4	493	genome.wustl.edu	37	1	203669375	203669375	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001684.3	+1	reviewed	p.D231Y	1.000	120	0%	182	19.8%	5	40%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_Calcium ATPase transmembrane domain M
ZC3H11A	9877	genome.wustl.edu	37	1	203802967	203802967	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014827.4	+1	validated	p.R287Q	1.000	160	0.6%	300	25%	18	33.3%	probably_damaging(0.958)	deleterious(0.01)	deleterious(0.807)	NULL
SOX13	9580	genome.wustl.edu	37	1	204095221	204095221	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005686.2	+1	reviewed	p.E610K	0.524	265	0%	439	31.9%	38	52.6%	benign(0.077)	deleterious(0.04)	neutral(0.354)	NULL
ETNK2	55224	genome.wustl.edu	37	1	204115879	204115879	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018208.2	-1	reviewed	p.E178*	1.000	197	0%	356	32.9%	4	0%	-	-	-	HMMPfam_Choline_kinase,superfamily_Kinase_like
PLEKHA6	22874	genome.wustl.edu	37	1	204234166	204234166	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014935.2	-1	validated	p.E95D	1.000	54	0%	81	30.9%	0	-	benign(0.279)	deleterious(0.04)	neutral(0.379)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
PLEKHA6	22874	genome.wustl.edu	37	1	204237428	204237428	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014935.2	-1	validated	p.A39T	0.272	89	0%	113	32.7%	0	-	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
PPP1R15B	84919	genome.wustl.edu	37	1	204379607	204379607	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032833.3	-1	validated	p.Q311H	0.244	121	0%	209	35.9%	7	42.8%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_CReP_N
PIK3C2B	5287	genome.wustl.edu	37	1	204397272	204397272	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002646.3	-1	reviewed	p.S1492F	1.000	59	0%	154	34.4%	2	50%	possibly_damaging(0.76)	deleterious(0.04)	deleterious(0.630)	NULL
MDM4	4194	genome.wustl.edu	37	1	204507385	204507385	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002393.3	+1	validated	p.D154N	0.001	166	0%	385	37.1%	6	66.6%	benign(0.001)	tolerated(0.19)	neutral(0.050)	NULL
LRRN2	10446	genome.wustl.edu	37	1	204588804	204588804	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006338.2	-1	reviewed	p.S106L	0.233	77	0%	126	34.1%	0	-	probably_damaging(0.971)	deleterious(0.01)	deleterious(0.819)	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like
NFASC	23114	genome.wustl.edu	37	1	204913384	204913384	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000367169	+1	known	p.R47W	0.262	46	0%	54	31.5%	0	-	-	-	-	NULL
NFASC	23114	genome.wustl.edu	37	1	204955186	204955186	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015090.3	+1	reviewed	p.N908I	1.000	72	0%	105	40%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
RBBP5	5929	genome.wustl.edu	37	1	205068201	205068201	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005057.2	-1	reviewed	p.E338*	1.000	400	0%	606	31.4%	3	0%	-	-	-	superfamily_WD40 repeat-like
DSTYK	25778	genome.wustl.edu	37	1	205138769	205138769	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015375.2	-1	reviewed	p.P282	0.002	121	0.8%	182	33.5%	1	0%	-	-	-	NULL
CDK18	5129	genome.wustl.edu	37	1	205499461	205499461	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_212503.2	+1	validated	p.V462	0.998	69	0%	109	32.1%	51	39.2%	-	-	-	superfamily_Kinase_like
MFSD4	148808	genome.wustl.edu	37	1	205553098	205553098	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181644.4	+1	validated	p.A236T	1.000	91	0%	104	39.4%	0	-	possibly_damaging(0.636)	deleterious(0.01)	deleterious(0.628)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
SLC45A3	85414	genome.wustl.edu	37	1	205628515	205628515	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033102.2	-1	validated	p.Q503H	1.000	52	0%	74	28.4%	4	50%	benign(0.372)	tolerated(0.11)	neutral(0.390)	NULL
PM20D1	148811	genome.wustl.edu	37	1	205797820	205797820	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152491.4	-1	validated	p.V479	1.000	278	0%	476	33.4%	1	0%	-	-	-	HMMPfam_Peptidase_M20,superfamily_Zn-dependent exopeptidases
FAM72A	729533	genome.wustl.edu	37	1	206141509	206141509	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001123168.1	+1	predicted	p.I72	0.949	652	0%	1027	10.2%	6	16.6%	-	-	-	NULL
SRGAP2	23380	genome.wustl.edu	37	1	206566114	206566114	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000295713	+1	known	p.E99*	1.000	374	0%	807	11.8%	12	8.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
IKBKE	9641	genome.wustl.edu	37	1	206650051	206650051	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014002.2	+1	validated	p.R191*	0.819	95	0%	108	42.6%	3	0%	-	-	-	superfamily_Kinase_like,HMMPfam_Pkinase
DYRK3	8444	genome.wustl.edu	37	1	206820829	206820829	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003582.2	+1	reviewed	p.K96Q	0.240	131	0%	211	36.5%	0	-	benign(0.041)	tolerated(0.23)	neutral(0.044)	NULL
DYRK3	8444	genome.wustl.edu	37	1	206821511	206821511	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003582.2	+1	reviewed	p.L323S	1.000	114	0%	128	27.3%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
FAIM3	9214	genome.wustl.edu	37	1	207078463	207078463	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142472.1	-1	validated	p.P358	0.000	221	0%	290	33.8%	1	0%	-	-	-	NULL
C1orf116	79098	genome.wustl.edu	37	1	207196138	207196138	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023938.5	-1	validated	p.R324H	0.003	158	0%	253	34.8%	0	-	probably_damaging(0.99)	tolerated(0.09)	deleterious(0.738)	NULL
YOD1	55432	genome.wustl.edu	37	1	207222527	207222527	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018566.3	-1	validated	p.V295	0.901	239	0%	374	29.7%	1	100%	-	-	-	NULL
C4BPB	725	genome.wustl.edu	37	1	207273175	207273175	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000716.3	+1	reviewed	p.E220D	0.000	193	0%	236	42.8%	0	-	possibly_damaging(0.801)	tolerated(0.06)	deleterious(0.624)	NULL
C4BPA	722	genome.wustl.edu	37	1	207300168	207300168	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000715.3	+1	reviewed	p.L273I	0.040	199	0%	279	37.3%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
C4BPA	722	genome.wustl.edu	37	1	207305078	207305078	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000715.3	+1	reviewed	p.G359	0.001	195	0%	236	32.6%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CD55	1604	genome.wustl.edu	37	1	207498083	207498083	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114752.1	+1	reviewed	p.E156K	0.027	100	0%	127	38.6%	24	20.8%	possibly_damaging(0.869)	deleterious(0.03)	deleterious(0.702)	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
CR2	1380	genome.wustl.edu	37	1	207641991	207641991	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006658.2	+1	reviewed	p.L189I	1.000	432	0%	436	29.4%	0	-	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
CR2	1380	genome.wustl.edu	37	1	207646473	207646473	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006658.2	+1	reviewed	p.R643C	1.000	82	0%	81	38.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
CR1	1378	genome.wustl.edu	37	1	207751211	207751211	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000651.4	+1	reviewed	p.E1533D	0.005	288	0%	509	34.8%	0	-	probably_damaging(0.974)	tolerated(0.47)	neutral(0.427)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CR1	1378	genome.wustl.edu	37	1	207751285	207751285	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000651.4	+1	reviewed	p.V1558G	0.333	320	0%	465	29.9%	0	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
PLXNA2	5362	genome.wustl.edu	37	1	208383795	208383795	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025179.3	-1	reviewed	p.D401N	1.000	116	0%	165	36.4%	0	-	benign(0.304)	tolerated(0.74)	neutral(0.096)	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
CAMK1G	57172	genome.wustl.edu	37	1	209782400	209782400	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020439.2	+1	reviewed	p.E237D	1.000	189	0%	299	33.1%	0	-	benign(0.093)	tolerated(0.18)	neutral(0.063)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
CAMK1G	57172	genome.wustl.edu	37	1	209786134	209786134	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020439.2	+1	reviewed	p.F449L	1.000	182	0%	234	29.5%	0	-	benign(0.002)	deleterious(0.01)	neutral(0.406)	NULL
LAMB3	3914	genome.wustl.edu	37	1	209788645	209788645	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000228.2	-1	reviewed	p.R1164C	0.854	95	0%	122	26.2%	21	23.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TRAF3IP3	80342	genome.wustl.edu	37	1	209950783	209950783	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025228.2	+1	reviewed	p.C360	0.043	95	0%	100	40%	7	0%	-	-	-	NULL
C1orf74	148304	genome.wustl.edu	37	1	209956475	209956475	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152485.2	-1	predicted	p.L169V	1.000	80	0%	119	30.3%	4	75%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
DIEXF	27042	genome.wustl.edu	37	1	210008446	210008446	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014388.5	+1	validated	p.E197*	1.000	209	0%	237	29.5%	0	-	-	-	-	NULL
SYT14	255928	genome.wustl.edu	37	1	210194398	210194398	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153262.2	+1	validated	p.D81N	1.000	126	0%	165	40.6%	1	0%	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
SYT14	255928	genome.wustl.edu	37	1	210334183	210334183	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153262.2	+1	validated	p.V488	0.617	271	0%	224	38.4%	1	100%	-	-	-	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
HHAT	55733	genome.wustl.edu	37	1	210577856	210577856	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122834.2	+1	validated	p.L173M	0.534	106	0%	109	38.5%	5	60%	benign(0.397)	tolerated(0.15)	neutral(0.368)	HMMPfam_MBOAT
KCNH1	3756	genome.wustl.edu	37	1	211192437	211192437	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172362.2	-1	reviewed	p.S240	1.000	162	0%	224	24.6%	1	100%	-	-	-	superfamily_Voltage-gated potassium channels
LPGAT1	9926	genome.wustl.edu	37	1	211923318	211923318	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014873.2	-1	validated	p.L346I	0.837	132	0%	195	31.3%	5	80%	benign(0.282)	tolerated(0.34)	neutral(0.109)	NULL
LPGAT1	9926	genome.wustl.edu	37	1	212002500	212002500	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014873.2	-1	validated	p.R47*	0.990	135	0%	244	32.8%	3	33.3%	-	-	-	superfamily_Glycerol-3-phosphate (1)-acyltransferase
INTS7	25896	genome.wustl.edu	37	1	212115237	212115237	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015434.2	-1	provisional	p.R940C	1.000	284	0.4%	411	28%	9	44.4%	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	NULL
INTS7	25896	genome.wustl.edu	37	1	212141299	212141299	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015434.2	-1	provisional	p.R679*	1.000	94	0%	141	38.3%	1	0%	-	-	-	NULL
DTL	51514	genome.wustl.edu	37	1	212236233	212236233	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016448.2	+1	validated	p.F156L	1.000	234	0%	341	35.8%	6	16.6%	probably_damaging(1)	tolerated(0.15)	deleterious(0.741)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
DTL	51514	genome.wustl.edu	37	1	212273915	212273915	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016448.2	+1	validated	p.R528I	0.999	143	0%	242	10.7%	9	11.1%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
NSL1	25936	genome.wustl.edu	37	1	212957757	212957757	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015471.3	-1	reviewed	p.R131I	1.000	196	0%	313	34.2%	14	42.8%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_Mis14
CENPF	1063	genome.wustl.edu	37	1	214813415	214813415	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016343.3	+1	reviewed	p.E578D	0.510	59	0%	56	28.6%	0	-	probably_damaging(0.971)	tolerated(0.27)	neutral(0.447)	NULL
CENPF	1063	genome.wustl.edu	37	1	214814274	214814274	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016343.3	+1	reviewed	p.E865*	1.000	30	0%	45	28.9%	2	50%	-	-	-	superfamily_Spectrin repeat
CENPF	1063	genome.wustl.edu	37	1	214815093	214815093	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016343.3	+1	reviewed	p.E1138K	0.796	146	0%	168	32.1%	1	0%	probably_damaging(0.971)	tolerated(0.37)	neutral(0.432)	NULL
KCTD3	51133	genome.wustl.edu	37	1	215747166	215747166	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016121.3	+1	validated	p.D41Y	1.000	176	0%	146	32.2%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain
KCTD3	51133	genome.wustl.edu	37	1	215793426	215793426	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016121.3	+1	validated	p.T638	1.000	139	0%	133	30.1%	6	50%	-	-	-	NULL
USH2A	7399	genome.wustl.edu	37	1	215847677	215847677	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206933.2	-1	reviewed	p.R4526*	0.020	169	0%	150	36.7%	0	-	-	-	-	superfamily_Fibronectin type III
USH2A	7399	genome.wustl.edu	37	1	215853545	215853545	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206933.2	-1	reviewed	p.G4080	0.998	312	0%	264	35.6%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
USH2A	7399	genome.wustl.edu	37	1	215932051	215932051	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206933.2	-1	reviewed	p.A3759T	0.000	390	0%	367	31.6%	0	-	benign(0)	tolerated(0.62)	neutral(0.004)	superfamily_Fibronectin type III
USH2A	7399	genome.wustl.edu	37	1	216062378	216062378	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206933.2	-1	reviewed	p.P2538H	1.000	114	0%	94	38.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
USH2A	7399	genome.wustl.edu	37	1	216591867	216591867	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206933.2	-1	reviewed	p.L214I	1.000	199	0%	108	26.9%	0	-	possibly_damaging(0.766)	tolerated(0.27)	neutral(0.318)	HMMSmart_SM00560,superfamily_Concanavalin A-like lectins/glucanases
ESRRG	2104	genome.wustl.edu	37	1	216824346	216824346	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001438.2	-1	validated	p.M186I	1.000	255	0%	200	38.5%	0	-	benign(0.018)	tolerated(0.27)	neutral(0.034)	HMMPfam_zf-C4,HMMSmart_SM00399,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
ESRRG	2104	genome.wustl.edu	37	1	216850700	216850700	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001438.2	-1	validated	p.A64T	1.000	182	0%	246	28.9%	0	-	benign(0.024)	deleterious(0)	neutral(0.446)	NULL
SPATA17	128153	genome.wustl.edu	37	1	218036162	218036162	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138796.2	+1	provisional	p.G351V	1.000	224	0%	173	28.9%	4	50%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
TGFB2	7042	genome.wustl.edu	37	1	218578556	218578556	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135599.1	+1	validated	p.R159Q	0.997	235	0%	312	34.3%	3	0%	probably_damaging(0.999)	tolerated(0.18)	deleterious(0.546)	HMMPfam_TGFb_propeptide
TGFB2	7042	genome.wustl.edu	37	1	218607517	218607517	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135599.1	+1	validated	p.D230N	1.000	181	0.6%	186	39.2%	3	0%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_TGFb_propeptide
EPRS	2058	genome.wustl.edu	37	1	220151978	220151978	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004446.2	-1	reviewed	p.R1331	0.000	181	0%	200	28%	110	46.3%	-	-	-	HMMPfam_HGTP_anticodon,superfamily_Anticodon_bd
IARS2	55699	genome.wustl.edu	37	1	220313567	220313567	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018060.3	+1	validated	p.R784W	1.000	189	0%	230	32.6%	48	41.6%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases,HMMPfam_Anticodon_1
IARS2	55699	genome.wustl.edu	37	1	220318962	220318962	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018060.3	+1	validated	p.E955K	0.073	108	0%	153	27.5%	81	40.7%	benign(0.026)	tolerated(0.48)	neutral(0.011)	superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RAB3GAP2	25782	genome.wustl.edu	37	1	220375667	220375667	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000484658	-1	known	p.E156*	1.000	201	0%	266	31.6%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
MARK1	4139	genome.wustl.edu	37	1	220791812	220791812	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018650.3	+1	validated	p.V238G	1.000	212	0%	218	33%	6	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
DUSP10	11221	genome.wustl.edu	37	1	221912393	221912393	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007207.3	-1	reviewed	p.E232*	1.000	164	0%	177	38.4%	1	0%	-	-	-	HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_Rhodanese/Cell cycle control phosphatase
HHIPL2	79802	genome.wustl.edu	37	1	222716944	222716944	+	Missense_Mutation	SNP	C	C	A	rs142197988	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024746.3	-1	validated	p.K303N	1.000	97	0%	154	33.1%	0	-	probably_damaging(0.989)	tolerated(0.2)	deleterious(0.488)	superfamily_Quino_gluc_DH
MIA3	375056	genome.wustl.edu	37	1	222800982	222800982	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198551.2	+1	validated	p.L140	0.952	232	0%	218	25.2%	4	100%	-	-	-	NULL
MIA3	375056	genome.wustl.edu	37	1	222825333	222825333	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198551.2	+1	validated	p.K1308N	1.000	207	0%	194	27.3%	15	60%	possibly_damaging(0.946)	deleterious(0.04)	deleterious(0.739)	NULL
MIA3	375056	genome.wustl.edu	37	1	222826433	222826433	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198551.2	+1	validated	p.D1390E	0.053	254	0%	276	34.8%	28	57.1%	probably_damaging(0.953)	tolerated(0.17)	neutral(0.456)	NULL
MIA3	375056	genome.wustl.edu	37	1	222833630	222833630	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198551.2	+1	validated	p.R1696Q	0.999	129	0%	138	37%	84	50%	probably_damaging(0.991)	tolerated(0.31)	deleterious(0.471)	NULL
BROX	148362	genome.wustl.edu	37	1	222904778	222904778	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144695.2	+1	validated	p.E357K	0.998	165	0%	155	26.5%	16	37.5%	benign(0.065)	tolerated(0.54)	neutral(0.012)	HMMPfam_BRO1
FAM177B	400823	genome.wustl.edu	37	1	222919944	222919944	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207468.2	+1	validated	p.K19N	0.003	187	0%	266	36.1%	0	-	benign(0.001)	tolerated(0.34)	neutral(0.023)	NULL
FAM177B	400823	genome.wustl.edu	37	1	222922886	222922886	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207468.2	+1	validated	p.F107L	0.033	138	0%	143	32.9%	0	-	benign(0.001)	deleterious(0.02)	neutral(0.383)	NULL
DISP1	84976	genome.wustl.edu	37	1	223176278	223176278	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032890.2	+1	reviewed	p.I513	1.000	243	0.4%	280	32.9%	2	50%	-	-	-	HMMPfam_Patched,superfamily_SSF82866
DISP1	84976	genome.wustl.edu	37	1	223176954	223176954	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032890.2	+1	reviewed	p.N739D	0.998	153	0%	193	30.1%	0	-	benign(0.307)	tolerated(0.25)	neutral(0.133)	HMMPfam_Patched
DISP1	84976	genome.wustl.edu	37	1	223178170	223178170	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032890.2	+1	reviewed	p.P1144L	1.000	153	0%	190	29.5%	4	50%	benign(0.068)	tolerated(0.22)	neutral(0.046)	NULL
DISP1	84976	genome.wustl.edu	37	1	223178788	223178788	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032890.2	+1	reviewed	p.S1350Y	1.000	26	0%	38	28.9%	5	60%	benign(0.242)	deleterious(0.04)	neutral(0.373)	NULL
SUSD4	55061	genome.wustl.edu	37	1	223396739	223396739	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000271787	-1	known	p.A207V	0.012	73	0%	78	28.2%	0	-	benign(0.095)	deleterious(0)	neutral(0.452)	NULL
SUSD4	55061	genome.wustl.edu	37	1	223408304	223408304	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037175.2	-1	validated	p.S288Y	0.005	223	0%	495	30.7%	0	-	unknown(0)	-	-	NULL
C1orf65	164127	genome.wustl.edu	37	1	223567309	223567309	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152610.2	+1	validated	p.E164D	0.000	33	0%	45	37.8%	0	-	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	NULL
CAPN2	824	genome.wustl.edu	37	1	223958206	223958206	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001748.4	+1	reviewed	p.R628W	1.000	90	0%	204	35.3%	30	30%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_EF-hand
TP53BP2	7159	genome.wustl.edu	37	1	223981018	223981018	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031685.2	-1	reviewed	p.R950I	1.000	53	0%	88	26.1%	22	36.3%	benign(0.01)	deleterious(0.01)	neutral(0.406)	superfamily_ANK
TP53BP2	7159	genome.wustl.edu	37	1	223998179	223998179	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031685.2	-1	reviewed	p.R109I	1.000	263	0%	297	27.3%	6	66.6%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
TP53BP2	7159	genome.wustl.edu	37	1	224008970	224008970	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031685.2	-1	reviewed	p.E43*	1.000	177	0%	412	36.7%	8	50%	-	-	-	NULL
FBXO28	23219	genome.wustl.edu	37	1	224318215	224318215	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015176.2	+1	validated	p.N103K	1.000	198	0%	483	36.4%	7	28.5%	probably_damaging(0.973)	deleterious(0)	deleterious(0.859)	NULL
DEGS1	8560	genome.wustl.edu	37	1	224377616	224377616	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003676.2	+1	reviewed	p.V140	0.036	209	0%	482	34%	27	40.7%	-	-	-	HMMPfam_FA_desaturase
CNIH4	29097	genome.wustl.edu	37	1	224553593	224553593	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014184.2	+1	provisional	p.E51*	1.000	334	0.3%	715	36.4%	135	32.5%	-	-	-	HMMPfam_Cornichon
WDR26	80232	genome.wustl.edu	37	1	224612259	224612259	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025160.6	-1	reviewed	p.P95L	1.000	101	0%	141	28.4%	21	57.1%	probably_damaging(0.987)	tolerated(0.11)	deleterious(0.708)	NULL
DNAH14	127602	genome.wustl.edu	37	1	225267039	225267039	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001373.1	+1	validated	p.S852F	0.358	137	0%	116	34.5%	0	-	unknown(0)	tolerated(0.11)	-	NULL
DNAH14	127602	genome.wustl.edu	37	1	225459628	225459628	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001373.1	+1	validated	p.F2558L	0.871	115	0%	180	35%	0	-	benign(0.313)	tolerated(1)	neutral(0.098)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH14	127602	genome.wustl.edu	37	1	225577523	225577523	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001373.1	+1	validated	p.F4324L	0.001	164	0%	286	34.3%	3	0%	benign(0)	tolerated(0.08)	neutral(0.300)	HMMPfam_Dynein_heavy
LBR	3930	genome.wustl.edu	37	1	225609788	225609788	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002296.2	-1	reviewed	p.P119	0.012	86	0%	139	25.2%	5	20%	-	-	-	NULL
TMEM63A	9725	genome.wustl.edu	37	1	226055697	226055697	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014698.2	-1	validated	p.D135	0.704	107	0%	194	40.7%	16	37.5%	-	-	-	NULL
C1orf55	163859	genome.wustl.edu	37	1	226175925	226175925	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152608.3	-1	validated	p.A269V	0.000	222	0%	430	33.7%	11	54.5%	possibly_damaging(0.5)	tolerated(0.26)	neutral(0.201)	NULL
ACBD3	64746	genome.wustl.edu	37	1	226334352	226334352	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022735.3	-1	reviewed	p.R516W	1.000	87	0%	150	42.7%	13	38.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Supernatant protein factor (SPF) C-terminal domain
LIN9	286826	genome.wustl.edu	37	1	226474059	226474059	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173083.2	-1	provisional	p.R183W	1.000	109	0%	103	28.2%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DIRP
PARP1	142	genome.wustl.edu	37	1	226567747	226567747	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001618.3	-1	reviewed	p.F473L	0.328	156	0%	214	32.7%	75	53.3%	benign(0)	tolerated(0.75)	neutral(0.002)	NULL
ITPKB	3707	genome.wustl.edu	37	1	226827287	226827287	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002221.3	-1	reviewed	p.E842*	1.000	269	0%	379	30.6%	4	0%	-	-	-	HMMPfam_IPK,superfamily_SAICAR synthase-like
ADCK3	56997	genome.wustl.edu	37	1	227149105	227149105	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020247.4	+1	reviewed	p.D7Y	1.000	45	0%	68	33.8%	6	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ADCK3	56997	genome.wustl.edu	37	1	227171907	227171907	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020247.4	+1	reviewed	p.E457K	0.912	41	0%	44	25%	19	47.3%	benign(0.01)	tolerated(0.43)	neutral(0.014)	superfamily_Protein kinase-like (PK-like)
ZNF678	339500	genome.wustl.edu	37	1	227842672	227842672	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178549.3	+1	validated	p.E241*	0.826	76	0%	40	42.5%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF678	339500	genome.wustl.edu	37	1	227842889	227842889	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178549.3	+1	validated	p.R313K	0.789	57	0%	36	27.8%	1	100%	benign(0.032)	tolerated(0.18)	neutral(0.058)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF678	339500	genome.wustl.edu	37	1	227843477	227843477	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178549.3	+1	validated	p.R509I	0.979	86	0%	47	21.3%	0	-	benign(0.005)	tolerated(0.12)	neutral(0.261)	superfamily_SSF57667
WNT3A	89780	genome.wustl.edu	37	1	228210590	228210590	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033131.2	+1	reviewed	p.F98	0.862	35	0%	39	30.8%	0	-	-	-	-	HMMPfam_wnt,HMMSmart_WNT1
GJC2	57165	genome.wustl.edu	37	1	228346345	228346345	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020435.2	+1	reviewed	p.D296N	1.000	22	0%	14	28.6%	0	-	benign(0.228)	deleterious(0.04)	neutral(0.371)	NULL
OBSCN	84033	genome.wustl.edu	37	1	228401191	228401191	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098623.1	+1	reviewed	p.E346D	1.000	59	0%	56	41.1%	1	100%	probably_damaging(0.99)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228403331	228403331	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098623.1	+1	reviewed	p.F632L	1.000	82	0%	112	34.8%	0	-	probably_damaging(0.987)	-	-	HMMSmart_SM00409,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228404774	228404774	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098623.1	+1	reviewed	p.G813D	0.484	51	0%	34	17.6%	0	-	probably_damaging(0.956)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228447203	228447203	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000359599	+1	known	p.E132	0.991	55	0%	122	28.7%	0	-	-	-	-	superfamily_Immunoglobulin
OBSCN	84033	genome.wustl.edu	37	1	228525714	228525714	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098623.1	+1	reviewed	p.R5624W	1.000	60	0%	132	30.3%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
OBSCN	84033	genome.wustl.edu	37	1	228529254	228529254	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000441106	+1	known	p.Q608*	1.000	63	0%	51	35.3%	2	0%	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
OBSCN	84033	genome.wustl.edu	37	1	228556470	228556470	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000441106	+1	known	p.L1222M	1.000	171	0.6%	209	36.4%	0	-	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
ABCB10	23456	genome.wustl.edu	37	1	229654610	229654610	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012089.2	-1	reviewed	p.L655I	1.000	140	0%	186	31.7%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ABC_tran,HMMSmart_AAA,superfamily_SSF52540
URB2	9816	genome.wustl.edu	37	1	229770844	229770844	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014777.2	+1	provisional	p.E162K	0.102	69	0%	72	30.6%	4	75%	possibly_damaging(0.921)	deleterious(0.04)	deleterious(0.720)	NULL
URB2	9816	genome.wustl.edu	37	1	229772337	229772337	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014777.2	+1	provisional	p.I659M	0.000	128	0%	223	37.2%	2	50%	benign(0.135)	deleterious(0.02)	neutral(0.395)	NULL
GALNT2	2590	genome.wustl.edu	37	1	230338999	230338999	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004481.3	+1	reviewed	p.R113*	0.995	112	0%	127	28.3%	14	0%	-	-	-	superfamily_Nucleotide-diphospho-sugar transferases
GALNT2	2590	genome.wustl.edu	37	1	230415063	230415063	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004481.3	+1	reviewed	p.I525	0.996	61	0%	77	39%	37	59.4%	-	-	-	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,superfamily_Ricin B-like lectins
PGBD5	79605	genome.wustl.edu	37	1	230468774	230468774	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024554.3	-1	reviewed	p.C393	0.943	110	0%	126	34.1%	0	-	-	-	-	NULL
AGT	183	genome.wustl.edu	37	1	230846432	230846432	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000029.3	-1	reviewed	p.A55	0.331	187	0%	307	26.1%	0	-	-	-	-	superfamily_Serpins
TTC13	79573	genome.wustl.edu	37	1	231069592	231069592	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024525.4	-1	validated	p.F306V	1.000	119	0%	158	31.6%	7	57.1%	probably_damaging(0.99)	tolerated(0.18)	deleterious(0.497)	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
TTC13	79573	genome.wustl.edu	37	1	231097014	231097014	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024525.4	-1	validated	p.E103K	1.000	140	0%	309	34%	0	-	benign(0.136)	tolerated(0.32)	neutral(0.036)	NULL
ARV1	64801	genome.wustl.edu	37	1	231131553	231131553	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022786.1	+1	provisional	p.R166W	0.013	174	0%	203	34.5%	11	27.2%	probably_damaging(0.977)	deleterious(0.02)	deleterious(0.802)	HMMPfam_Arv1
LOC644006	644006	genome.wustl.edu	37	1	231157846	231157846	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_929433.4	+1	model	p.R164C	1.000	116	0%	197	33%	0	-	-	-	-	HMMSmart_SM00184,HMMPfam_zf-C3HC4,superfamily_RING/U-box
TRIM67	440730	genome.wustl.edu	37	1	231349633	231349633	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004342.3	+1	validated	p.F732L	1.000	55	0%	96	34.4%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_SPRY,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00449
C1orf131	128061	genome.wustl.edu	37	1	231360158	231360158	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152379.2	-1	validated	p.K250R	0.995	157	0%	207	37.2%	11	36.3%	possibly_damaging(0.718)	tolerated(0.64)	neutral(0.263)	NULL
C1orf131	128061	genome.wustl.edu	37	1	231364895	231364895	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152379.2	-1	validated	e3+1	1.000	57	0%	77	24.7%	0	-	-	-	-	-
DISC1	27185	genome.wustl.edu	37	1	231829852	231829852	+	Silent	SNP	G	G	A	rs189101828	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018662.2	+1	reviewed	p.A116	0.000	51	0%	72	30.6%	3	33.3%	-	-	-	NULL
DISC1	27185	genome.wustl.edu	37	1	231885676	231885676	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018662.2	+1	reviewed	p.E374D	0.893	137	0%	201	30.8%	0	-	probably_damaging(0.975)	deleterious(0)	deleterious(0.861)	NULL
SIPA1L2	57568	genome.wustl.edu	37	1	232538167	232538167	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020808.3	-1	validated	p.L1665I	1.000	385	0%	467	30%	35	48.5%	probably_damaging(0.978)	deleterious(0.02)	deleterious(0.803)	NULL
SIPA1L2	57568	genome.wustl.edu	37	1	232579369	232579369	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020808.3	-1	validated	p.R1139I	1.000	164	0%	219	30.6%	10	30%	possibly_damaging(0.849)	deleterious(0.01)	deleterious(0.732)	NULL
KIAA1383	54627	genome.wustl.edu	37	1	232943524	232943524	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019090.2	+1	validated	p.K919Q	0.277	71	0%	99	46.5%	4	25%	possibly_damaging(0.837)	tolerated(0.19)	neutral(0.369)	NULL
PCNXL2	80003	genome.wustl.edu	37	1	233121840	233121840	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014801.3	-1	provisional	p.R2080W	0.995	23	0%	24	25%	10	60%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
PCNXL2	80003	genome.wustl.edu	37	1	233296178	233296178	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014801.3	-1	provisional	p.P1123Q	0.994	102	0%	142	30.3%	8	37.5%	possibly_damaging(0.943)	deleterious(0.01)	deleterious(0.793)	NULL
KIAA1804	84451	genome.wustl.edu	37	1	233490680	233490680	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032435.2	+1	validated	p.E412*	1.000	124	0%	176	29%	1	100%	-	-	-	superfamily_Protein kinase-like (PK-like)
KIAA1804	84451	genome.wustl.edu	37	1	233498022	233498022	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032435.2	+1	validated	p.R512Q	0.993	56	0%	146	42.5%	1	100%	probably_damaging(0.97)	tolerated(0.29)	neutral(0.442)	NULL
KIAA1804	84451	genome.wustl.edu	37	1	233518198	233518198	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032435.2	+1	validated	p.R951I	0.366	113	0%	126	42.1%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
KIAA1804	84451	genome.wustl.edu	37	1	233518445	233518445	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032435.2	+1	validated	p.E1033D	0.991	69	0%	81	34.6%	1	0%	benign(0.008)	tolerated(0.38)	neutral(0.018)	NULL
TARBP1	6894	genome.wustl.edu	37	1	234529164	234529164	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005646.3	-1	reviewed	p.D1502N	1.000	133	0%	196	30.1%	25	20%	possibly_damaging(0.708)	tolerated(0.08)	deleterious(0.555)	HMMPfam_SpoU_methylase,superfamily_SSF75217
TARBP1	6894	genome.wustl.edu	37	1	234529508	234529508	+	Missense_Mutation	SNP	C	C	T	rs190205796	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005646.3	-1	reviewed	p.R1440H	0.000	70	0%	122	34.4%	22	59%	benign(0)	tolerated(0.12)	neutral(0.261)	NULL
TARBP1	6894	genome.wustl.edu	37	1	234569285	234569285	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005646.3	-1	reviewed	p.L755	0.126	208	0%	279	30.5%	3	33.3%	-	-	-	NULL
LYST	1130	genome.wustl.edu	37	1	235892950	235892950	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000081.2	-1	reviewed	p.R3018*	1.000	144	0%	156	37.8%	0	-	-	-	-	superfamily_PH domain-like
LYST	1130	genome.wustl.edu	37	1	235909822	235909822	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000081.2	-1	reviewed	p.R2596*	0.998	148	0%	107	30.8%	3	0%	-	-	-	NULL
LYST	1130	genome.wustl.edu	37	1	235918821	235918821	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000081.2	-1	reviewed	p.F2396V	1.000	178	0%	186	31.2%	2	50%	probably_damaging(0.99)	-	-	NULL
LYST	1130	genome.wustl.edu	37	1	235922751	235922751	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000081.2	-1	reviewed	p.N2134	0.000	200	0%	251	24.7%	0	-	-	-	-	NULL
LYST	1130	genome.wustl.edu	37	1	235966256	235966256	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000081.2	-1	reviewed	p.E1222K	1.000	187	0%	225	28.9%	0	-	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
LYST	1130	genome.wustl.edu	37	1	235969939	235969939	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000081.2	-1	reviewed	p.D833Y	0.977	179	0%	219	26.5%	0	-	probably_damaging(0.955)	deleterious(0.04)	deleterious(0.748)	NULL
NID1	4811	genome.wustl.edu	37	1	236205290	236205290	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002508.2	-1	reviewed	p.S352Y	0.430	84	0%	119	34.5%	12	0%	possibly_damaging(0.719)	tolerated(0.06)	deleterious(0.583)	NULL
GPR137B	7107	genome.wustl.edu	37	1	236347187	236347187	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000454895	+1	known	p.E180*	1.000	304	0%	385	32.7%	26	34.6%	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	NULL
LGALS8	3964	genome.wustl.edu	37	1	236706120	236706120	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000366583	+1	known	p.G194	0.000	353	0%	491	32.4%	2	0%	-	-	-	NULL
HEATR1	55127	genome.wustl.edu	37	1	236717027	236717027	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018072.4	-1	validated	p.L2031F	1.000	167	0%	242	29.8%	19	36.8%	possibly_damaging(0.598)	deleterious(0.02)	deleterious(0.590)	superfamily_ARM-type_fold
HEATR1	55127	genome.wustl.edu	37	1	236727937	236727937	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018072.4	-1	validated	p.F1487C	0.001	240	0%	269	35.3%	3	33.3%	possibly_damaging(0.883)	tolerated(0.18)	neutral(0.401)	superfamily_ARM-type_fold
HEATR1	55127	genome.wustl.edu	37	1	236740123	236740123	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018072.4	-1	validated	p.S961Y	0.739	85	0%	124	25.8%	1	100%	benign(0.063)	deleterious(0.04)	neutral(0.353)	superfamily_ARM-type_fold
ACTN2	88	genome.wustl.edu	37	1	236900491	236900491	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001103.2	+1	reviewed	p.E285*	1.000	145	0%	267	32.2%	0	-	-	-	-	HMMPfam_Spectrin,superfamily_Spectrin repeat
RYR2	6262	genome.wustl.edu	37	1	237617858	237617858	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001035.2	+1	reviewed	p.N487T	1.000	116	0%	137	40.1%	0	-	benign(0.15)	-	-	HMMPfam_RYDR_ITPR
RYR2	6262	genome.wustl.edu	37	1	237821259	237821259	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001035.2	+1	reviewed	p.E2715D	1.000	132	0%	122	35.2%	0	-	benign(0.001)	-	-	HMMPfam_RyR
RYR2	6262	genome.wustl.edu	37	1	237831247	237831247	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001035.2	+1	reviewed	p.L2860S	1.000	82	0%	76	27.6%	1	0%	probably_damaging(1)	-	-	HMMPfam_RyR
RYR2	6262	genome.wustl.edu	37	1	237850791	237850791	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001035.2	+1	reviewed	p.R3018	1.000	238	0%	257	27.6%	0	-	-	-	-	NULL
RYR2	6262	genome.wustl.edu	37	1	237872222	237872222	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001035.2	+1	reviewed	p.L3322F	0.013	158	0%	136	27.2%	0	-	possibly_damaging(0.948)	-	-	NULL
RYR2	6262	genome.wustl.edu	37	1	237886508	237886508	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001035.2	+1	reviewed	p.E3545D	1.000	279	0%	409	33.7%	0	-	probably_damaging(0.974)	-	-	NULL
RYR2	6262	genome.wustl.edu	37	1	237948060	237948060	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001035.2	+1	reviewed	p.E4350*	0.999	83	0%	81	23.5%	0	-	-	-	-	HMMPfam_RR_TM4-6
CHRM3	1131	genome.wustl.edu	37	1	240072033	240072033	+	Missense_Mutation	SNP	C	C	A	rs143690744		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000740.2	+1	reviewed	p.P428T	1.000	81	0%	132	35.6%	0	-	benign(0.003)	tolerated(0.18)	neutral(0.056)	HMMPfam_7tm_1,superfamily_SSF81321
FMN2	56776	genome.wustl.edu	37	1	240256805	240256805	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020066.4	+1	validated	p.A466T	0.027	27	0%	46	28.3%	0	-	unknown(0)	deleterious(0.01)	-	NULL
FMN2	56776	genome.wustl.edu	37	1	240492391	240492391	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020066.4	+1	validated	p.E1411K	1.000	108	0%	142	30.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_FH2,HMMPfam_FH2,superfamily_FH2_actin_bd
RGS7	6000	genome.wustl.edu	37	1	240990408	240990408	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002924.4	-1	validated	p.K225T	1.000	259	0%	323	31%	0	-	possibly_damaging(0.659)	deleterious(0.05)	deleterious(0.578)	NULL
RGS7	6000	genome.wustl.edu	37	1	241146388	241146388	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002924.4	-1	validated	p.E73*	1.000	122	0%	112	33%	0	-	-	-	-	HMMPfam_DEP,HMMSmart_DEP,superfamily_SSF46785
KMO	8564	genome.wustl.edu	37	1	241695752	241695752	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003679.3	+1	validated	p.S3*	0.990	460	0%	411	33.8%	0	-	-	-	-	superfamily_FAD/NAD(P)-binding domain
CHML	1122	genome.wustl.edu	37	1	241797786	241797786	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001821.3	-1	reviewed	p.R428I	1.000	136	0%	110	26.4%	4	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GDI,superfamily_FAD/NAD(P)-binding domain
CHML	1122	genome.wustl.edu	37	1	241798294	241798294	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001821.3	-1	reviewed	p.F259L	1.000	100	0%	82	35.4%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GDI,superfamily_FAD/NAD(P)-binding domain
WDR64	128025	genome.wustl.edu	37	1	241834464	241834464	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000366552	+1	known	p.R122Q	0.954	236	0%	289	28.7%	0	-	probably_damaging(0.997)	tolerated(0.27)	deleterious(0.500)	superfamily_WD40 repeat-like
WDR64	128025	genome.wustl.edu	37	1	241850845	241850845	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144625.4	+1	validated	p.D18Y	1.000	176	0%	214	31.3%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
WDR64	128025	genome.wustl.edu	37	1	241920703	241920703	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144625.4	+1	validated	p.A340V	0.000	249	0%	251	31.1%	0	-	possibly_damaging(0.837)	tolerated(0.12)	deleterious(0.580)	superfamily_WD40 repeat-like
EXO1	9156	genome.wustl.edu	37	1	242042071	242042071	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006027.4	+1	reviewed	p.S512Y	0.001	149	0%	195	29.2%	8	37.5%	benign(0.273)	tolerated(0.37)	neutral(0.048)	NULL
LOC440742	440742	genome.wustl.edu	37	1	244228068	244228068	+	RNA	SNP	C	C	T	rs180700151	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_040547.1	+1	model	NULL	0.000	117	0%	169	29.6%	0	-	-	-	-	-
C1orf100	200159	genome.wustl.edu	37	1	244541860	244541860	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012970.1	+1	predicted	p.R82*	0.015	118	0%	155	38.7%	0	-	-	-	-	NULL
HNRNPU-AS1	284702	genome.wustl.edu	37	1	245006328	245006328	+	RNA	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026778.1	-1	predicted	NULL	0.011	69	0%	56	33.9%	0	-	-	-	-	-
HNRNPU-AS1	284702	genome.wustl.edu	37	1	245006330	245006330	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026778.1	-1	predicted	NULL	0.006	71	0%	58	31%	2	0%	-	-	-	-
KIF26B	55083	genome.wustl.edu	37	1	245849127	245849127	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018012.3	+1	provisional	p.E948K	0.993	13	0%	19	26.3%	1	100%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
KIF26B	55083	genome.wustl.edu	37	1	245849259	245849259	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018012.3	+1	provisional	p.E992*	0.991	37	0%	46	26.1%	1	0%	-	-	-	NULL
SMYD3	64754	genome.wustl.edu	37	1	246027124	246027124	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022743.2	-1	validated	p.I234S	0.999	454	0.2%	437	37.5%	18	5.5%	possibly_damaging(0.911)	deleterious(0)	deleterious(0.807)	NULL
SMYD3	64754	genome.wustl.edu	37	1	246091308	246091308	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022743.2	-1	validated	p.D150	1.000	94	0%	136	35.3%	16	68.7%	-	-	-	HMMPfam_SET,HMMSmart_SET,superfamily_SSF82199
CNST	163882	genome.wustl.edu	37	1	246797780	246797780	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152609.2	+1	validated	p.K237Q	1.000	109	0%	235	37%	2	0%	probably_damaging(0.998)	tolerated(0.12)	deleterious(0.735)	NULL
CNST	163882	genome.wustl.edu	37	1	246823621	246823621	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152609.2	+1	validated	p.D653N	0.947	107	0%	269	30.5%	3	66.6%	probably_damaging(0.994)	tolerated(0.13)	deleterious(0.705)	NULL
SCCPDH	51097	genome.wustl.edu	37	1	246921595	246921595	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016002.2	+1	validated	p.R211I	0.737	188	0%	258	35.3%	27	44.4%	possibly_damaging(0.515)	deleterious(0.01)	deleterious(0.579)	HMMPfam_Saccharop_dh
AHCTF1	25909	genome.wustl.edu	37	1	247040366	247040366	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015446.4	-1	validated	p.F941L	1.000	201	0%	199	39.7%	3	0%	probably_damaging(0.998)	tolerated(0.18)	deleterious(0.530)	NULL
ZNF695	57116	genome.wustl.edu	37	1	247150450	247150450	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020394.3	-1	validated	p.R456I	0.654	127	0%	218	27.1%	1	0%	probably_damaging(0.997)	tolerated(0.24)	deleterious(0.504)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF695	57116	genome.wustl.edu	37	1	247150618	247150618	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020394.3	-1	validated	p.R400K	0.964	131	0%	167	29.3%	2	50%	benign(0.063)	tolerated(0.42)	neutral(0.018)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF670	93474	genome.wustl.edu	37	1	247200863	247200863	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033213.2	-1	validated	p.R353Q	0.001	142	0%	181	29.3%	6	50%	possibly_damaging(0.457)	tolerated(0.95)	neutral(0.150)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF670	93474	genome.wustl.edu	37	1	247201271	247201271	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033213.2	-1	validated	p.R217I	0.990	128	0%	232	36.6%	6	50%	possibly_damaging(0.445)	tolerated(0.09)	neutral(0.442)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF124	7678	genome.wustl.edu	37	1	247322323	247322323	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003431.2	-1	provisional	p.S68Y	0.286	285	0%	362	31.8%	2	50%	benign(0.001)	deleterious(0.05)	neutral(0.345)	superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF496	84838	genome.wustl.edu	37	1	247464244	247464244	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032752.1	-1	provisional	p.S447	0.998	61	0%	48	25%	30	53.3%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF496	84838	genome.wustl.edu	37	1	247464516	247464516	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032752.1	-1	provisional	p.L357I	0.082	52	0%	60	38.3%	21	66.6%	probably_damaging(0.99)	tolerated(0.29)	deleterious(0.471)	NULL
ZNF496	84838	genome.wustl.edu	37	1	247492554	247492554	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032752.1	-1	provisional	p.S109	0.694	42	0%	30	36.7%	15	60%	-	-	-	HMMPfam_SCAN,HMMSmart_SCAN
NLRP3	114548	genome.wustl.edu	37	1	247588824	247588824	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079821.2	+1	reviewed	p.E693D	0.235	182	0%	327	33%	0	-	benign(0.202)	tolerated(0.51)	neutral(0.028)	NULL
OR2B11	127623	genome.wustl.edu	37	1	247614861	247614861	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004492.1	-1	provisional	p.R142C	0.100	63	0%	88	40.9%	0	-	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	HMMPfam_7tm_1,superfamily_SSF81321
OR2B11	127623	genome.wustl.edu	37	1	247615090	247615090	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004492.1	-1	provisional	p.I65	0.002	176	0%	333	34.5%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR2C3	81472	genome.wustl.edu	37	1	247695508	247695508	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198074.4	-1	validated	p.F102L	0.970	162	0%	242	36.4%	0	-	possibly_damaging(0.631)	tolerated(1)	neutral(0.221)	HMMPfam_7tm_1,superfamily_SSF81321
OR2G2	81470	genome.wustl.edu	37	1	247752533	247752533	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001915.1	+1	provisional	p.L291R	0.141	94	0%	84	21.4%	0	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_7tm_1,superfamily_SSF81321
OR14A16	284532	genome.wustl.edu	37	1	247978955	247978955	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001966.1	-1	provisional	p.S26L	0.000	126	0%	166	30.1%	0	-	benign(0.125)	deleterious(0)	neutral(0.455)	superfamily_SSF81321
OR2T8	343172	genome.wustl.edu	37	1	248084670	248084670	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005522.1	+1	validated	p.A117	0.991	111	0%	150	15.3%	0	-	-	-	-	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321
OR2L8	391190	genome.wustl.edu	37	1	248112403	248112403	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001963.1	+1	provisional	p.S82A	0.000	378	0%	521	33.4%	0	-	benign(0.003)	tolerated(0.77)	neutral(0.001)	HMMPfam_7tm_1,superfamily_SSF81321
OR2L8	391190	genome.wustl.edu	37	1	248112953	248112953	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001963.1	+1	provisional	p.R265Q	0.001	175	0%	201	30.3%	0	-	benign(0.253)	deleterious(0.04)	neutral(0.375)	HMMPfam_7tm_1,superfamily_SSF81321
OR2AK2	391191	genome.wustl.edu	37	1	248129423	248129423	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004491.1	+1	provisional	p.S264G	0.000	234	0%	304	37.5%	0	-	probably_damaging(0.988)	tolerated(0.76)	neutral(0.439)	HMMPfam_7tm_1,superfamily_SSF81321
OR2L5	81466	genome.wustl.edu	37	1	248185450	248185450	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000355281	+1	known	p.L67	0.000	231	0%	351	32.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR2L5	81466	genome.wustl.edu	37	1	248186043	248186043	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000355281	+1	known	p.R265Q	0.000	149	0%	160	31.2%	0	-	benign(0.253)	tolerated(0.05)	neutral(0.371)	HMMPfam_7tm_1,superfamily_SSF81321
OR2L2	26246	genome.wustl.edu	37	1	248201637	248201637	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004686.2	+1	provisional	p.G23D	0.016	306	0%	354	29.9%	0	-	benign(0.09)	tolerated(1)	neutral(0.006)	superfamily_SSF81321
OR2L2	26246	genome.wustl.edu	37	1	248201998	248201998	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004686.2	+1	provisional	p.M143I	0.535	218	0%	294	27.9%	0	-	benign(0.077)	tolerated(0.24)	neutral(0.043)	HMMPfam_7tm_1,superfamily_SSF81321
OR2M2	391194	genome.wustl.edu	37	1	248343565	248343565	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004688.1	+1	provisional	p.S93Y	0.011	451	0%	546	31.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_SSF81321
OR2M2	391194	genome.wustl.edu	37	1	248343588	248343588	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004688.1	+1	provisional	p.I101F	0.002	415	0%	432	26.6%	0	-	probably_damaging(0.976)	deleterious(0.05)	deleterious(0.763)	HMMPfam_7tm_1,superfamily_SSF81321
OR2M4	26245	genome.wustl.edu	37	1	248402830	248402830	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017504.1	+1	provisional	p.V200	0.001	182	0.5%	241	28.2%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR2T4	127074	genome.wustl.edu	37	1	248525202	248525202	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004696.1	+1	provisional	p.S107F	0.079	511	0%	673	49.5%	0	-	benign(0.199)	deleterious(0.01)	neutral(0.425)	HMMPfam_7tm_1,superfamily_SSF81321
OR2T6	254879	genome.wustl.edu	37	1	248551149	248551149	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005471.1	+1	provisional	p.K80N	0.697	509	0%	572	34.1%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_7tm_1,superfamily_SSF81321
OR2T2	401992	genome.wustl.edu	37	1	248616908	248616908	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004136.1	+1	provisional	p.E270D	0.003	469	0%	617	15.7%	0	-	probably_damaging(0.975)	tolerated(0.41)	neutral(0.432)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR2T3	343173	genome.wustl.edu	37	1	248636766	248636766	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005495.1	+1	provisional	p.L39I	0.001	522	0%	532	16%	0	-	benign(0)	tolerated(1)	-	superfamily_SSF81321
OR2T10	127069	genome.wustl.edu	37	1	248756254	248756254	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004693.1	-1	provisional	p.M272I	0.000	69	0%	95	73.7%	0	-	benign(0.089)	deleterious(0)	neutral(0.451)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR2T11	127077	genome.wustl.edu	37	1	248789496	248789496	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001964.1	-1	provisional	p.A312S	0.001	46	0%	83	45.8%	0	-	benign(0)	tolerated(1)	-	NULL
OR2T11	127077	genome.wustl.edu	37	1	248789743	248789743	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001964.1	-1	provisional	p.E229D	0.013	35	0%	76	64.5%	0	-	benign(0.077)	deleterious(0.02)	neutral(0.389)	HMMPfam_7tm_1,superfamily_SSF81321
OR2T27	403239	genome.wustl.edu	37	1	248813850	248813850	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001824.1	-1	provisional	p.F112L	0.000	49	0%	84	20.2%	0	-	probably_damaging(0.998)	tolerated(0.64)	deleterious(0.477)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321
PGBD2	267002	genome.wustl.edu	37	1	249210925	249210925	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170725.2	+1	validated	p.D48N	0.002	68	0%	118	24.6%	4	25%	benign(0.01)	deleterious(0.02)	neutral(0.384)	NULL
PGBD2	267002	genome.wustl.edu	37	1	249210940	249210940	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170725.2	+1	validated	p.E53*	0.999	73	0%	115	35.7%	4	50%	-	-	-	NULL
PGBD2	267002	genome.wustl.edu	37	1	249211080	249211080	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170725.2	+1	validated	p.K99	0.018	77	0%	114	32.5%	4	50%	-	-	-	NULL
PGBD2	267002	genome.wustl.edu	37	1	249211486	249211486	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170725.2	+1	validated	p.E235*	0.012	80	0%	157	36.9%	8	25%	-	-	-	NULL
ACP1	52	genome.wustl.edu	37	2	277002	277002	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004300.3	+1	reviewed	p.Q106*	1.000	118	0%	133	39.1%	76	17.1%	-	-	-	HMMPfam_LMWPc,HMMSmart_SM00226,superfamily_Phosphotyrosine protein phosphatases I
ACP1	52	genome.wustl.edu	37	2	277495	277495	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_024080.1	+1	reviewed	NULL	0.000	9	0.000	16	0.375	57	17.5%	-	-	-	-
TPO	7173	genome.wustl.edu	37	2	1457568	1457568	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000547.5	+1	reviewed	p.F195L	0.008	38	0%	53	26.4%	0	-	benign(0.183)	tolerated(0.66)	neutral(0.019)	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases
PXDN	7837	genome.wustl.edu	37	2	1651955	1651955	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012293.1	-1	validated	p.E1199D	1.000	63	0%	83	36.1%	12	0%	benign(0.04)	tolerated(0.2)	neutral(0.052)	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases
TSSC1	7260	genome.wustl.edu	37	2	3197793	3197793	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003310.2	-1	validated	p.K266N	1.000	117	0%	138	32.6%	57	50.8%	possibly_damaging(0.467)	tolerated(0.31)	neutral(0.180)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
TSSC1	7260	genome.wustl.edu	37	2	3341890	3341890	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003310.2	-1	validated	p.N53D	1.000	160	0%	223	28.3%	15	20%	probably_damaging(0.996)	tolerated(0.12)	deleterious(0.722)	superfamily_WD40_like
ALLC	55821	genome.wustl.edu	37	2	3729223	3729223	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018436.3	+1	validated	e5-1	0.885	128	0%	121	29.8%	0	-	-	-	-	-
ALLC	55821	genome.wustl.edu	37	2	3729225	3729225	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018436.3	+1	validated	p.D100	0.025	130	0%	123	37.4%	0	-	-	-	-	superfamily_Gal_bind_like,HMMPfam_Allantoicase
ALLC	55821	genome.wustl.edu	37	2	3750004	3750004	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018436.3	+1	validated	p.D343Y	0.989	43	0%	63	28.6%	0	-	possibly_damaging(0.718)	deleterious(0.02)	deleterious(0.643)	superfamily_Gal_bind_like,HMMPfam_Allantoicase
CMPK2	129607	genome.wustl.edu	37	2	6991587	6991587	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207315.2	-1	validated	p.R407H	1.000	225	0%	276	36.2%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Thymidylate_kin,superfamily_P-loop containing nucleoside triphosphate hydrolases
RSAD2	91543	genome.wustl.edu	37	2	7027222	7027222	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080657.4	+1	validated	p.S222Y	0.997	144	0%	161	37.3%	0	-	possibly_damaging(0.923)	deleterious(0)	deleterious(0.817)	HMMSmart_Elp3,superfamily_SSF102114
KIDINS220	57498	genome.wustl.edu	37	2	8871889	8871889	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020738.2	-1	validated	p.S1426F	1.000	237	0%	262	33.2%	13	46.1%	possibly_damaging(0.848)	deleterious(0)	deleterious(0.770)	NULL
ASAP2	8853	genome.wustl.edu	37	2	9514947	9514947	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003887.2	+1	reviewed	p.H540	0.015	53	0%	176	35.2%	7	28.5%	-	-	-	HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_Pyk2-associated protein beta ARF-GAP domain
ADAM17	6868	genome.wustl.edu	37	2	9630613	9630613	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003183.4	-1	reviewed	p.S723L	0.989	138	0.7%	245	33.5%	19	42.1%	probably_damaging(0.967)	deleterious(0.02)	deleterious(0.792)	NULL
TAF1B	9014	genome.wustl.edu	37	2	10053329	10053329	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005680.2	+1	reviewed	p.K408*	1.000	234	0%	331	33.5%	3	33.3%	-	-	-	NULL
GRHL1	29841	genome.wustl.edu	37	2	10098938	10098938	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000324907	+1	known	p.S77	0.059	164	0%	426	31%	2	0%	-	-	-	NULL
GRHL1	29841	genome.wustl.edu	37	2	10136458	10136458	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198182.2	+1	reviewed	p.R347*	1.000	268	0.4%	469	34.1%	7	14.2%	-	-	-	NULL
ATP6V1C2	245973	genome.wustl.edu	37	2	10912689	10912689	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039362.1	+1	reviewed	p.Q197H	1.000	200	0%	400	32.5%	1	100%	benign(0.023)	tolerated(0.55)	neutral(0.008)	HMMPfam_V-ATPase_C
KCNF1	3754	genome.wustl.edu	37	2	11053816	11053816	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002236.4	+1	reviewed	p.A422T	0.999	94	0%	149	32.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ROCK2	9475	genome.wustl.edu	37	2	11335145	11335145	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004850.3	-1	reviewed	p.R1152K	1.000	255	0%	264	30.7%	6	66.6%	possibly_damaging(0.73)	tolerated(1)	neutral(0.267)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
E2F6	1876	genome.wustl.edu	37	2	11591852	11591852	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198256.2	-1	reviewed	p.E154G	1.000	126	0%	188	31.9%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GREB1	9687	genome.wustl.edu	37	2	11696805	11696805	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014668.3	+1	reviewed	p.I22S	1.000	93	0%	122	39.3%	2	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
TRIB2	28951	genome.wustl.edu	37	2	12863535	12863535	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021643.3	+1	reviewed	p.F140	0.842	128	0%	144	36.8%	15	6.6%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
TRIB2	28951	genome.wustl.edu	37	2	12880833	12880833	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021643.3	+1	reviewed	p.S315	0.735	137	0%	151	33.1%	18	16.6%	-	-	-	superfamily_Protein kinase-like (PK-like)
TRIB2	28951	genome.wustl.edu	37	2	12880996	12880996	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_027303.1	+1	reviewed	NULL	0.000	57	0%	73	27.4%	22	27.2%	-	-	-	-
NBAS	51594	genome.wustl.edu	37	2	15492156	15492156	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015909.2	-1	validated	p.N1380T	0.000	342	0%	474	29.3%	12	50%	benign(0.004)	tolerated(0.21)	neutral(0.044)	NULL
DDX1	1653	genome.wustl.edu	37	2	15760365	15760365	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004939.1	+1	reviewed	p.D414N	1.000	286	0.3%	396	29.3%	58	46.5%	benign(0.099)	tolerated(0.08)	neutral(0.307)	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
FAM49A	81553	genome.wustl.edu	37	2	16734221	16734221	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030797.3	-1	validated	p.R319	1.000	350	0%	342	38.6%	3	0%	-	-	-	HMMPfam_DUF1394
RAD51AP2	729475	genome.wustl.edu	37	2	17699118	17699118	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099218.2	-1	provisional	p.E189*	0.002	82	0%	83	31.3%	0	-	-	-	-	NULL
SMC6	79677	genome.wustl.edu	37	2	17902527	17902527	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142286.1	-1	validated	p.R243Q	1.000	140	0%	164	34.8%	2	0%	benign(0.139)	tolerated(0.13)	neutral(0.265)	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
GEN1	348654	genome.wustl.edu	37	2	17963100	17963100	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130009.1	+1	validated	p.S874Y	0.005	84	0%	89	27%	0	-	possibly_damaging(0.598)	deleterious(0)	deleterious(0.651)	NULL
MSGN1	343930	genome.wustl.edu	37	2	17998314	17998314	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105569.1	+1	provisional	p.E177K	0.994	34	0%	44	36.4%	0	-	probably_damaging(0.996)	tolerated(0.25)	deleterious(0.498)	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic
NT5C1B	93034	genome.wustl.edu	37	2	18745341	18745341	+	Nonsense_Mutation	SNP	C	C	A	rs147103410		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000418427	-1	known	p.E173*	1.000	130	0%	163	31.9%	0	-	possibly_damaging(0.564)	deleterious(0.04)	deleterious(0.541)	HMMPfam_5-nucleotidase
SDC1	6382	genome.wustl.edu	37	2	20402893	20402893	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006946.1	-1	reviewed	p.T240A	0.995	44	2.3%	36	27.8%	19	26.3%	benign(0.022)	deleterious(0.03)	neutral(0.365)	HMMPfam_Syndecan
PUM2	23369	genome.wustl.edu	37	2	20453624	20453624	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015317.1	-1	provisional	p.D1008N	1.000	202	0%	269	19.3%	25	0%	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	HMMPfam_PUF,HMMSmart_SM00025,superfamily_ARM repeat
PUM2	23369	genome.wustl.edu	37	2	20483243	20483243	+	Nonsense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015317.1	-1	provisional	p.Y432*	1.000	130	0%	110	32.7%	3	0%	-	-	-	NULL
C2orf43	60526	genome.wustl.edu	37	2	20939834	20939834	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021925.2	-1	predicted	p.P200	0.000	189	0%	166	31.3%	10	50%	-	-	-	HMMPfam_DUF2305,superfamily_SSF53474
APOB	338	genome.wustl.edu	37	2	21225459	21225459	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.E4279*	0.000	234	0%	166	30.7%	0	-	-	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21228464	21228464	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.P3759Q	1.000	83	0%	91	33%	0	-	probably_damaging(0.978)	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21228510	21228510	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.L3744I	0.002	82	0%	84	33.3%	0	-	possibly_damaging(0.736)	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21228796	21228796	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.V3648	0.006	157	0%	126	27.8%	0	-	-	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21228819	21228819	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.S3641A	0.000	152	0%	123	35.8%	0	-	benign(0.117)	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21228915	21228915	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.S3609T	0.006	131	0%	75	37.3%	0	-	benign(0.429)	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21231890	21231890	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.F2617C	1.000	77	0%	59	22%	0	-	probably_damaging(0.999)	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21234324	21234324	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.L1806M	0.001	168	0%	191	35.1%	0	-	possibly_damaging(0.619)	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21234850	21234850	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.I1630	0.000	130	0%	127	33.1%	0	-	-	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21234944	21234944	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.R1599H	0.879	128	0%	131	35.9%	0	-	probably_damaging(0.998)	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21235490	21235490	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.T1417M	0.000	134	0%	136	25%	0	-	probably_damaging(1)	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21239397	21239397	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.E1082	0.005	193	0%	249	29.7%	0	-	-	-	-	NULL
APOB	338	genome.wustl.edu	37	2	21242683	21242683	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.P971T	0.000	175	0%	270	35.6%	0	-	benign(0)	-	-	HMMPfam_DUF1081,superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions
APOB	338	genome.wustl.edu	37	2	21251370	21251370	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000384.2	-1	reviewed	p.S553Y	0.968	111	0%	157	36.9%	0	-	probably_damaging(0.99)	-	-	HMMPfam_Vitellogenin_N,HMMSmart_SM00638,superfamily_Lipovitellin-phosvitin complex superhelical domain
KLHL29	114818	genome.wustl.edu	37	2	23918622	23918622	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000486442	+1	known	p.R558C	1.000	50	0%	37	35.1%	4	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_Galactose oxidase central domain
ATAD2B	54454	genome.wustl.edu	37	2	23974955	23974955	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017552.1	-1	validated	p.E1446D	1.000	102	0%	88	29.5%	10	20%	possibly_damaging(0.792)	tolerated(0.55)	neutral(0.304)	NULL
ATAD2B	54454	genome.wustl.edu	37	2	23977132	23977132	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017552.1	-1	validated	p.D1418Y	1.000	97	0%	60	41.7%	2	0%	probably_damaging(0.999)	tolerated(0.9)	deleterious(0.490)	NULL
ATAD2B	54454	genome.wustl.edu	37	2	23980404	23980404	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000381024	-1	known	p.R597*	0.114	216	0%	205	30.7%	3	33.3%	benign(0.003)	tolerated(0.73)	neutral(0.002)	NULL
ATAD2B	54454	genome.wustl.edu	37	2	24005807	24005807	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017552.1	-1	validated	p.D1022A	1.000	196	0%	155	25.8%	0	-	benign(0.421)	tolerated(0.31)	neutral(0.164)	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,PatternScan_BROMODOMAIN_1
ATAD2B	54454	genome.wustl.edu	37	2	24011417	24011417	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017552.1	-1	validated	p.Q914R	1.000	426	0%	391	25.1%	3	0%	benign(0.049)	tolerated(0.15)	neutral(0.244)	superfamily_P-loop containing nucleoside triphosphate hydrolases
ATAD2B	54454	genome.wustl.edu	37	2	24090788	24090788	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017552.1	-1	validated	p.D369N	1.000	124	0%	165	35.2%	2	50%	probably_damaging(0.986)	deleterious(0.01)	deleterious(0.840)	NULL
ATAD2B	54454	genome.wustl.edu	37	2	24107680	24107680	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017552.1	-1	validated	p.G247R	1.000	335	0%	563	29.3%	2	50%	probably_damaging(0.976)	tolerated(0.06)	deleterious(0.740)	NULL
C2orf44	80304	genome.wustl.edu	37	2	24260731	24260731	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025203.2	-1	validated	p.R545I	0.000	132	0%	281	34.9%	1	100%	benign(0.189)	tolerated(0.18)	neutral(0.074)	NULL
SF3B14	51639	genome.wustl.edu	37	2	24297061	24297061	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016047.3	-1	reviewed	p.R12*	1.000	195	0%	281	32.4%	138	23.9%	-	-	-	NULL
C2orf84	653140	genome.wustl.edu	37	2	24362260	24362260	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000454150	+1	known	p.H127Q	0.998	278	0%	429	35.4%	0	-	probably_damaging(0.999)	tolerated(0.36)	deleterious(0.510)	NULL
C2orf84	653140	genome.wustl.edu	37	2	24406173	24406173	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040710.1	+1	predicted	p.V61A	0.000	313	0%	474	32.5%	0	-	benign(0.067)	tolerated(0.49)	neutral(0.015)	NULL
NCOA1	8648	genome.wustl.edu	37	2	24929760	24929760	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003743.4	+1	reviewed	p.S474Y	1.000	58	0%	89	36%	3	66.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
NCOA1	8648	genome.wustl.edu	37	2	24951256	24951256	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003743.4	+1	reviewed	p.L933I	1.000	128	0%	198	39.9%	4	25%	probably_damaging(0.971)	tolerated(0.06)	deleterious(0.736)	superfamily_Nuclear receptor coactivator interlocking domain,HMMPfam_Nuc_rec_co-act
CENPO	79172	genome.wustl.edu	37	2	25022560	25022560	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024322.1	+1	provisional	p.L21F	1.000	86	0%	127	37.8%	11	63.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
EFR3B	22979	genome.wustl.edu	37	2	25344630	25344630	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014971.1	+1	validated	p.H151R	1.000	114	0%	106	37.7%	2	50%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	superfamily_ARM repeat
EFR3B	22979	genome.wustl.edu	37	2	25376604	25376604	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000264719	+1	known	p.Q610K	1.000	60	0%	86	32.6%	3	0%	-	-	-	NULL
DNMT3A	1788	genome.wustl.edu	37	2	25470468	25470468	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022552.3	-1	reviewed	p.F336V	1.000	219	0%	370	27%	5	20%	possibly_damaging(0.939)	tolerated(0.1)	deleterious(0.671)	HMMPfam_PWWP,HMMSmart_SM00293,superfamily_Tudor/PWWP/MBT
DTNB	1838	genome.wustl.edu	37	2	25754459	25754459	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021907.3	-1	reviewed	p.P295H	1.000	107	0%	231	32.9%	22	54.5%	possibly_damaging(0.657)	tolerated(0.1)	deleterious(0.518)	NULL
ASXL2	55252	genome.wustl.edu	37	2	25965778	25965778	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018263.4	-1	validated	p.S1143Y	0.838	107	0.9%	170	32.4%	4	75%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
KIF3C	3797	genome.wustl.edu	37	2	26204553	26204553	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002254.6	-1	validated	p.V78	1.000	15	0%	39	33.3%	2	0%	-	-	-	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
HADHA	3030	genome.wustl.edu	37	2	26437984	26437984	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000182.4	-1	reviewed	p.T246N	0.405	331	0%	480	34%	65	36.9%	benign(0)	tolerated(0.42)	neutral(0.014)	superfamily_ClpP/crotonase
HADHB	3032	genome.wustl.edu	37	2	26477150	26477150	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000183.2	+1	reviewed	p.N10H	0.933	130	0%	206	35.4%	8	50%	probably_damaging(0.992)	-	-	NULL
GPR113	165082	genome.wustl.edu	37	2	26536634	26536634	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145168.1	-1	validated	p.I424V	0.954	80	0%	128	34.4%	0	-	possibly_damaging(0.619)	tolerated(0.67)	neutral(0.218)	NULL
GPR113	165082	genome.wustl.edu	37	2	26539828	26539828	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145168.1	-1	validated	p.A152T	0.001	135	0%	217	32.3%	0	-	possibly_damaging(0.46)	tolerated(0.38)	neutral(0.168)	NULL
GPR113	165082	genome.wustl.edu	37	2	26541849	26541849	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145168.1	-1	validated	p.A23	0.001	164	0%	269	31.6%	0	-	-	-	-	NULL
CCDC164	92749	genome.wustl.edu	37	2	26647287	26647287	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145038.2	+1	validated	p.E169K	0.997	61	0%	113	36.3%	0	-	probably_damaging(0.991)	tolerated(0.22)	deleterious(0.486)	NULL
CCDC164	92749	genome.wustl.edu	37	2	26654771	26654771	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145038.2	+1	validated	p.R262H	1.000	116	0%	279	38.4%	0	-	possibly_damaging(0.497)	tolerated(0.09)	neutral(0.463)	NULL
OTOF	9381	genome.wustl.edu	37	2	26685042	26685042	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194248.2	-1	reviewed	p.L1734M	1.000	71	0%	126	31.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
OTOF	9381	genome.wustl.edu	37	2	26707452	26707452	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194248.2	-1	reviewed	p.I365	1.000	151	0%	173	30.1%	0	-	-	-	-	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_FerI
OTOF	9381	genome.wustl.edu	37	2	26726677	26726677	+	Silent	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194248.2	-1	reviewed	p.G182	1.000	91	0%	137	33.6%	0	-	-	-	-	NULL
CIB4	130106	genome.wustl.edu	37	2	26805695	26805695	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029881.1	-1	provisional	p.M175I	1.000	126	0%	193	33.7%	0	-	benign(0.023)	tolerated(0.34)	neutral(0.024)	superfamily_SSF47473
KCNK3	3777	genome.wustl.edu	37	2	26950590	26950590	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002246.2	+1	reviewed	p.Y113	1.000	47	0%	56	33.9%	0	-	-	-	-	HMMPfam_Ion_trans_2,superfamily_Voltage-gated potassium channels
TMEM214	54867	genome.wustl.edu	37	2	27261983	27261983	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000434544	+1	known	p.R59C	0.852	66	0%	72	29.2%	122	43.4%	-	-	-	HMMPfam_DUF2359
AGBL5	60509	genome.wustl.edu	37	2	27277663	27277663	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021831.5	+1	validated	p.F239	0.996	105	0%	210	37.6%	30	46.6%	-	-	-	superfamily_Zn-dependent exopeptidases
EMILIN1	11117	genome.wustl.edu	37	2	27302012	27302012	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007046.3	+1	reviewed	p.R27*	0.996	7	0.000	7	0.571	31	0%	-	-	-	NULL
ABHD1	84696	genome.wustl.edu	37	2	27351353	27351353	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032604.3	+1	reviewed	p.E53	0.928	192	0%	242	40.1%	0	-	-	-	-	NULL
SNX17	9784	genome.wustl.edu	37	2	27599559	27599559	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014748.2	+1	reviewed	p.F462	0.995	141	0%	226	36.7%	220	35.9%	-	-	-	NULL
PPM1G	5496	genome.wustl.edu	37	2	27607603	27607603	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177983.1	-1	reviewed	p.S254	1.000	69	0%	165	36.4%	86	8.1%	-	-	-	HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C
PPM1G	5496	genome.wustl.edu	37	2	27608638	27608638	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177983.1	-1	reviewed	p.E129*	1.000	344	0%	770	32.7%	81	7.4%	-	-	-	HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C
KRTCAP3	200634	genome.wustl.edu	37	2	27666897	27666897	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173853.3	+1	validated	p.R233W	0.006	121	0%	315	34.3%	6	0%	possibly_damaging(0.938)	deleterious(0.01)	deleterious(0.789)	NULL
IFT172	26160	genome.wustl.edu	37	2	27676959	27676959	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015662.1	-1	validated	p.E1201K	0.999	35	0%	70	37.1%	10	30%	possibly_damaging(0.783)	deleterious(0.02)	deleterious(0.676)	superfamily_HCP-like
GCKR	2646	genome.wustl.edu	37	2	27724039	27724039	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001486.3	+1	reviewed	p.N196I	0.984	132	0%	151	28.5%	0	-	benign(0.012)	deleterious(0.02)	neutral(0.384)	superfamily_SIS domain
C2orf16	84226	genome.wustl.edu	37	2	27800201	27800201	+	Silent	SNP	G	G	A	rs143452806	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032266.3	+1	validated	p.K254	0.000	61	0%	100	26%	2	50%	-	-	-	NULL
C2orf16	84226	genome.wustl.edu	37	2	27800430	27800430	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032266.3	+1	validated	p.E331*	0.012	159	0.6%	243	31.7%	0	-	-	-	-	NULL
C2orf16	84226	genome.wustl.edu	37	2	27802248	27802248	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032266.3	+1	validated	p.E937*	0.245	138	0%	155	39.4%	0	-	-	-	-	NULL
ZNF512	84450	genome.wustl.edu	37	2	27824298	27824298	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032434.2	+1	validated	p.H220N	1.000	403	0%	696	30.2%	6	16.6%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2
CCDC121	79635	genome.wustl.edu	37	2	27850729	27850729	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142683.2	-1	validated	p.F142V	0.000	115	0%	223	31.4%	1	0%	benign(0.124)	-	-	NULL
GPN1	11321	genome.wustl.edu	37	2	27873021	27873021	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007266.3	+1	reviewed	p.F374C	1.000	147	0%	228	18.9%	57	26.3%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	NULL
SUPT7L	9913	genome.wustl.edu	37	2	27878277	27878277	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014860.1	-1	provisional	p.R313C	1.000	116	0%	173	33.5%	46	54.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SUPT7L	9913	genome.wustl.edu	37	2	27884041	27884041	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014860.1	-1	provisional	p.R77C	1.000	185	0%	455	32.7%	28	10.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SUPT7L	9913	genome.wustl.edu	37	2	27884214	27884214	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014860.1	-1	provisional	p.R19I	1.000	135	0%	243	29.6%	18	11.1%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
SLC4A1AP	22950	genome.wustl.edu	37	2	27891721	27891721	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018158.2	+1	validated	p.E386*	1.000	185	0.5%	297	33.3%	8	0%	-	-	-	HMMPfam_dsrm,HMMSmart_DSRM
FOSL2	2355	genome.wustl.edu	37	2	28635229	28635229	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005253.3	+1	reviewed	p.S299A	1.000	37	0%	62	43.5%	78	34.6%	benign(0.417)	tolerated(0.15)	neutral(0.376)	NULL
PPP1CB	5500	genome.wustl.edu	37	2	29022064	29022064	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002709.2	+1	reviewed	e8-1	1.000	63	0%	80	28.7%	0	-	-	-	-	-
PPP1CB	5500	genome.wustl.edu	37	2	29022072	29022072	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002709.2	+1	reviewed	p.K296T	1.000	75	0%	89	34.8%	60	76.6%	benign(0.004)	deleterious(0)	neutral(0.445)	HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases
FAM179A	165186	genome.wustl.edu	37	2	29222282	29222282	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199280.2	+1	validated	p.K125N	1.000	36	0%	60	30%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FAM179A	165186	genome.wustl.edu	37	2	29234368	29234368	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199280.2	+1	validated	e6+1	1.000	218	0%	365	10.4%	0	-	-	-	-	-
FAM179A	165186	genome.wustl.edu	37	2	29256344	29256344	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199280.2	+1	validated	p.D714Y	0.999	212	0%	381	36%	0	-	probably_damaging(1)	tolerated(0.31)	deleterious(0.527)	superfamily_ARM repeat
FAM179A	165186	genome.wustl.edu	37	2	29259448	29259448	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199280.2	+1	validated	p.K820N	1.000	169	0%	292	37.3%	2	0%	probably_damaging(0.995)	tolerated(0.06)	deleterious(0.780)	superfamily_ARM repeat
ALK	238	genome.wustl.edu	37	2	29430052	29430052	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004304.3	-1	reviewed	p.S1308Y	0.998	103	0%	110	35.5%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
ALK	238	genome.wustl.edu	37	2	29432705	29432705	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004304.3	-1	reviewed	p.G1261	0.220	156	0%	198	35.9%	0	-	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
ALK	238	genome.wustl.edu	37	2	29543705	29543705	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004304.3	-1	reviewed	p.F486L	1.000	246	0%	349	32.4%	0	-	benign(0.001)	deleterious(0.02)	neutral(0.383)	HMMPfam_MAM
LBH	81606	genome.wustl.edu	37	2	30480454	30480454	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030915.3	+1	validated	p.C95	1.000	41	0%	97	33%	31	25.8%	-	-	-	NULL
XDH	7498	genome.wustl.edu	37	2	31571206	31571206	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000379.3	-1	reviewed	p.Y1025	1.000	118	0%	140	30.7%	0	-	-	-	-	HMMPfam_Ald_Xan_dh_C2,superfamily_Ald_xan_DH_mo_bd
XDH	7498	genome.wustl.edu	37	2	31624109	31624109	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000379.3	-1	reviewed	p.K95E	1.000	78	1.3%	123	30.1%	0	-	benign(0.027)	tolerated(0.08)	neutral(0.301)	HMMPfam_Fer2_2,superfamily_2Fe-2S_bind
NLRC4	58484	genome.wustl.edu	37	2	32475629	32475629	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000360906	-1	known	p.F435S	0.992	81	0%	150	32.7%	0	-	benign(0.17)	deleterious(0)	neutral(0.460)	NULL
NLRC4	58484	genome.wustl.edu	37	2	32476368	32476368	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000360906	-1	known	p.G189R	0.118	90	1.1%	117	29.1%	1	0%	possibly_damaging(0.951)	tolerated(0.09)	deleterious(0.691)	HMMPfam_NACHT,superfamily_P-loop containing nucleoside triphosphate hydrolases
BIRC6	57448	genome.wustl.edu	37	2	32656134	32656134	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016252.3	+1	reviewed	p.R1075Q	0.982	52	0%	94	27.7%	2	0%	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	NULL
BIRC6	57448	genome.wustl.edu	37	2	32667430	32667430	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016252.3	+1	reviewed	p.R1382Q	1.000	222	0%	401	33.7%	0	-	benign(0.068)	tolerated(0.62)	neutral(0.009)	NULL
BIRC6	57448	genome.wustl.edu	37	2	32692602	32692602	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016252.3	+1	reviewed	p.R1789I	1.000	253	0%	458	33.8%	2	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
BIRC6	57448	genome.wustl.edu	37	2	32704676	32704676	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016252.3	+1	reviewed	p.D2467Y	1.000	123	0%	153	28.1%	4	75%	possibly_damaging(0.805)	deleterious(0.03)	deleterious(0.667)	NULL
BIRC6	57448	genome.wustl.edu	37	2	32740826	32740826	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016252.3	+1	reviewed	p.L3780	1.000	29	0%	42	23.8%	6	66.6%	-	-	-	NULL
LTBP1	4052	genome.wustl.edu	37	2	33468851	33468851	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206943.2	+1	reviewed	p.P667S	0.969	198	0%	222	29.3%	18	27.7%	benign(0.122)	tolerated(0.56)	neutral(0.017)	superfamily_EGF/Laminin
RASGRP3	25780	genome.wustl.edu	37	2	33741704	33741704	+	Missense_Mutation	SNP	C	C	A	rs74600205	byCluster;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001139488.1	+1	validated	p.L56I	1.000	278	0%	356	36.8%	0	-	possibly_damaging(0.867)	tolerated(0.43)	neutral(0.350)	HMMPfam_RasGEF_N,HMMSmart_SM00229,superfamily_Ras GEF
RASGRP3	25780	genome.wustl.edu	37	2	33745024	33745024	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001139488.1	+1	validated	p.R60Q	0.998	415	0%	548	32.8%	0	-	benign(0.196)	tolerated(1)	neutral(0.018)	HMMPfam_RasGEF_N,HMMSmart_SM00229,superfamily_Ras GEF
RASGRP3	25780	genome.wustl.edu	37	2	33745704	33745704	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001139488.1	+1	validated	p.S107	0.989	299	0%	426	24.9%	0	-	-	-	-	HMMSmart_SM00229,superfamily_Ras GEF
ENSG00000181250	0	genome.wustl.edu	37	2	33952635	33952635	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000322472	-1	known	p.A70T	0.996	47	0%	64	28.1%	0	-	-	-	-	HMMPfam_MARVEL
STRN	6801	genome.wustl.edu	37	2	37082373	37082373	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003162.2	-1	validated	p.E654*	1.000	265	0%	391	32%	4	0%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like
HEATR5B	54497	genome.wustl.edu	37	2	37208731	37208731	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019024.1	-1	validated	p.R2040*	0.951	97	0%	146	34.9%	24	45.8%	-	-	-	NULL
HEATR5B	54497	genome.wustl.edu	37	2	37229678	37229678	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019024.1	-1	validated	p.L1696	0.538	104	0%	190	35.8%	7	14.2%	-	-	-	superfamily_ARM repeat
HEATR5B	54497	genome.wustl.edu	37	2	37286117	37286117	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019024.1	-1	validated	p.F621	1.000	117	0%	148	30.4%	2	100%	-	-	-	superfamily_ARM repeat
HEATR5B	54497	genome.wustl.edu	37	2	37289162	37289162	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019024.1	-1	validated	p.R539Q	1.000	174	0%	202	33.2%	4	25%	probably_damaging(0.998)	tolerated(0.1)	deleterious(0.761)	superfamily_ARM repeat
EIF2AK2	5610	genome.wustl.edu	37	2	37368810	37368810	+	Missense_Mutation	SNP	G	G	T	rs184007282	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135651.1	-1	validated	p.S92Y	0.010	126	0%	164	22%	6	0%	possibly_damaging(0.904)	deleterious(0.01)	deleterious(0.764)	superfamily_dsRNA-binding domain-like
C2orf56	55471	genome.wustl.edu	37	2	37468922	37468922	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144736.4	+1	validated	p.D204N	0.998	77	0%	122	37.7%	11	36.3%	possibly_damaging(0.944)	deleterious(0.01)	deleterious(0.794)	HMMPfam_DUF185
PRKD3	23683	genome.wustl.edu	37	2	37501633	37501633	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005813.3	-1	reviewed	p.R528C	1.000	159	0%	153	34.6%	11	27.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
FAM82A1	151393	genome.wustl.edu	37	2	38156691	38156691	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000354545	+1	known	p.E91*	1.000	110	0%	119	32.8%	2	50%	-	-	-	NULL
FAM82A1	151393	genome.wustl.edu	37	2	38156796	38156796	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000354545	+1	known	p.A126T	0.970	51	0%	102	30.4%	1	100%	benign(0)	tolerated(0.42)	neutral(0.014)	NULL
FAM82A1	151393	genome.wustl.edu	37	2	38179162	38179162	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144713.3	+1	validated	p.H268	0.000	120	0%	71	36.6%	0	-	-	-	-	NULL
FAM82A1	151393	genome.wustl.edu	37	2	38244389	38244389	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000404848	+1	known	p.R174Q	0.992	74	0%	107	38.3%	2	0%	-	-	-	NULL
HNRPLL	92906	genome.wustl.edu	37	2	38796354	38796354	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138394.3	-1	validated	p.K446T	1.000	175	0%	200	34.5%	66	48.4%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	superfamily_RNA-binding domain RBD
SRSF7	6432	genome.wustl.edu	37	2	38977271	38977271	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031684.2	-1	validated	p.S32R	1.000	113	0%	277	35.7%	77	51.9%	benign(0.005)	tolerated(0.67)	neutral(0.003)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
GEMIN6	79833	genome.wustl.edu	37	2	39008851	39008851	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024775.9	+1	validated	p.K107N	0.995	72	0%	205	32.2%	35	51.4%	probably_damaging(0.975)	tolerated(0.09)	deleterious(0.714)	HMMPfam_Gemin6
SOS1	6654	genome.wustl.edu	37	2	39251269	39251269	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005633.3	-1	reviewed	p.E362*	1.000	354	0%	311	33.1%	3	0%	-	-	-	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
CDKL4	344387	genome.wustl.edu	37	2	39456518	39456518	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009565.1	-1	provisional	p.I52M	0.960	237	0%	271	29.5%	0	-	possibly_damaging(0.94)	deleterious(0)	deleterious(0.830)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
SLC8A1	6546	genome.wustl.edu	37	2	40366782	40366782	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000359719	-1	known	p.E175*	1.000	92	0%	145	34.5%	1	0%	benign(0.228)	tolerated(0.08)	neutral(0.323)	NULL
SLC8A1	6546	genome.wustl.edu	37	2	40656333	40656333	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021097.2	-1	validated	p.F363C	1.000	225	0%	190	23.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SLC8A1	6546	genome.wustl.edu	37	2	40657396	40657396	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021097.2	-1	validated	p.L9I	0.024	92	0%	69	33.3%	0	-	benign(0.047)	tolerated(0.1)	neutral(0.289)	NULL
EML4	27436	genome.wustl.edu	37	2	42556902	42556902	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019063.3	+1	validated	p.S834N	1.000	147	0%	221	31.7%	18	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
KCNG3	170850	genome.wustl.edu	37	2	42671358	42671358	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133329.4	-1	reviewed	p.L343F	1.000	74	0%	142	26.8%	2	50%	probably_damaging(0.999)	tolerated(1)	deleterious(0.490)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
THADA	63892	genome.wustl.edu	37	2	43514105	43514105	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001083953.1	-1	validated	p.V1702	0.773	101	0%	174	35.1%	43	44.1%	-	-	-	NULL
THADA	63892	genome.wustl.edu	37	2	43571370	43571370	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001083953.1	-1	validated	p.H1412N	1.000	115	0%	140	40.7%	17	29.4%	probably_damaging(0.983)	deleterious(0.02)	deleterious(0.812)	NULL
THADA	63892	genome.wustl.edu	37	2	43776431	43776431	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001083953.1	-1	validated	p.K1008N	0.546	228	0%	324	33.6%	7	57.1%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_DUF2428
THADA	63892	genome.wustl.edu	37	2	43819152	43819152	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001083953.1	-1	validated	p.S37Y	1.000	126	0%	191	33%	4	75%	probably_damaging(0.982)	deleterious(0.01)	deleterious(0.832)	NULL
PLEKHH2	130271	genome.wustl.edu	37	2	43927267	43927267	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172069.3	+1	validated	p.F390	1.000	85	0%	140	37.9%	1	0%	-	-	-	NULL
PLEKHH2	130271	genome.wustl.edu	37	2	43980767	43980767	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172069.3	+1	validated	p.F1221L	1.000	83	0%	82	26.8%	1	100%	possibly_damaging(0.888)	tolerated(0.09)	deleterious(0.644)	superfamily_Second domain of FERM,HMMSmart_SM00295
LRPPRC	10128	genome.wustl.edu	37	2	44175658	44175658	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133259.3	-1	reviewed	e17-1	1.000	97	0%	130	34.6%	1	100%	-	-	-	-
LRPPRC	10128	genome.wustl.edu	37	2	44209440	44209440	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133259.3	-1	reviewed	p.R95*	0.992	111	0.9%	125	32%	2	50%	-	-	-	NULL
LRPPRC	10128	genome.wustl.edu	37	2	44209567	44209567	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133259.3	-1	reviewed	p.L52	0.000	51	0%	67	23.9%	2	100%	-	-	-	NULL
SLC3A1	6519	genome.wustl.edu	37	2	44531345	44531345	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000341.3	+1	reviewed	p.P400	0.424	247	0.8%	393	38.2%	0	-	-	-	-	HMMPfam_Alpha-amylase,HMMSmart_Aamy,superfamily_Glyco_hydro_cat
PREPL	9581	genome.wustl.edu	37	2	44553980	44553980	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006036.4	-1	reviewed	p.I539M	0.753	64	0%	66	22.7%	11	36.3%	possibly_damaging(0.93)	tolerated(0.14)	deleterious(0.626)	HMMPfam_Peptidase_S9,superfamily_alpha/beta-Hydrolases
SIX2	10736	genome.wustl.edu	37	2	45233380	45233380	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016932.4	-1	reviewed	p.Q269*	1.000	187	0%	199	34.7%	19	63.1%	-	-	-	NULL
EPAS1	2034	genome.wustl.edu	37	2	46583928	46583928	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001430.4	+1	reviewed	p.E145D	1.000	185	0%	287	35.2%	13	23%	probably_damaging(0.998)	tolerated(0.14)	deleterious(0.724)	HMMSmart_PAS,superfamily_SSF55785
EPAS1	2034	genome.wustl.edu	37	2	46605046	46605046	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001430.4	+1	reviewed	p.F421	0.731	54	0%	75	26.7%	26	15.3%	-	-	-	NULL
CALM2	805	genome.wustl.edu	37	2	47388940	47388940	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001743.4	-1	validated	p.E115K	1.000	323	0%	628	33%	435	36.3%	benign(0.266)	deleterious(0)	deleterious(0.473)	superfamily_EF-hand
MSH2	4436	genome.wustl.edu	37	2	47698180	47698180	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000251.1	+1	reviewed	p.E580*	1.000	88	0%	137	35%	18	0%	-	-	-	HMMPfam_MutS_III,HMMSmart_MUTSd,superfamily_DNA_repair_MutS_domIII
MSH6	2956	genome.wustl.edu	37	2	48027043	48027043	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000179.2	+1	reviewed	p.E641*	1.000	56	0%	75	32%	9	0%	-	-	-	HMMPfam_MutS_II
MSH6	2956	genome.wustl.edu	37	2	48030686	48030686	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000179.2	+1	reviewed	p.T1100	0.559	205	0%	356	62.6%	26	73%	-	-	-	HMMPfam_MutS_V,HMMSmart_SM00533,superfamily_P-loop containing nucleoside triphosphate hydrolases
PPP1R21	129285	genome.wustl.edu	37	2	48688353	48688353	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135629.1	+1	validated	p.V226L	1.000	137	0%	145	28.3%	9	44.4%	benign(0.003)	tolerated(0.15)	neutral(0.241)	NULL
STON1-GTF2A1L	286749	genome.wustl.edu	37	2	48808043	48808043	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172311.1	+1	reviewed	p.F91I	0.001	223	0%	360	30.3%	0	-	benign(0)	deleterious(0.04)	neutral(0.349)	NULL
STON1-GTF2A1L	286749	genome.wustl.edu	37	2	48808721	48808721	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172311.1	+1	reviewed	p.K317Q	1.000	68	0%	95	35.8%	0	-	probably_damaging(0.973)	tolerated(0.13)	deleterious(0.667)	NULL
STON1-GTF2A1L	286749	genome.wustl.edu	37	2	48848323	48848323	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172311.1	+1	reviewed	p.V751	0.549	153	0%	175	36.6%	0	-	-	-	-	HMMPfam_TFIIA,superfamily_TFIIA_helical
LHCGR	3973	genome.wustl.edu	37	2	48915046	48915046	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000233.3	-1	reviewed	p.F630	1.000	69	0%	67	29.9%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
LHCGR	3973	genome.wustl.edu	37	2	48915452	48915452	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000233.3	-1	reviewed	p.S495F	0.001	152	0%	191	34.6%	0	-	benign(0.045)	tolerated(0.75)	neutral(0.004)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
LHCGR	3973	genome.wustl.edu	37	2	48921364	48921364	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000233.3	-1	reviewed	p.L316I	0.333	217	0%	234	29.1%	0	-	benign(0.014)	deleterious(0)	neutral(0.445)	NULL
LHCGR	3973	genome.wustl.edu	37	2	48952828	48952828	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000233.3	-1	reviewed	p.R124*	1.000	279	0%	306	32%	0	-	-	-	-	superfamily_L domain-like
NRXN1	9378	genome.wustl.edu	37	2	50318568	50318568	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135659.1	-1	reviewed	p.N1244T	1.000	207	0%	234	32.9%	0	-	benign(0.022)	tolerated(0.23)	neutral(0.043)	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2
NRXN1	9378	genome.wustl.edu	37	2	50318575	50318575	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135659.1	-1	reviewed	p.E1242*	1.000	211	0%	231	34.6%	0	-	-	-	-	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2
ASB3	51130	genome.wustl.edu	37	2	53921045	53921045	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016115.3	-1	reviewed	p.A449T	0.215	240	0%	229	29.3%	34	41.1%	benign(0)	tolerated(0.7)	neutral(0.002)	NULL
CHAC2	494143	genome.wustl.edu	37	2	54001559	54001559	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008708.2	+1	provisional	p.S151Y	1.000	121	0%	154	34.4%	7	42.8%	benign(0.011)	deleterious(0.02)	neutral(0.384)	HMMPfam_ChaC
GPR75	10936	genome.wustl.edu	37	2	54080682	54080682	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006794.2	-1	validated	p.K404N	1.000	56	0%	82	34.1%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	superfamily_Family A G protein-coupled receptor-like
GPR75	10936	genome.wustl.edu	37	2	54080989	54080989	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006794.2	-1	validated	p.R302Q	1.000	295	0%	591	36%	0	-	probably_damaging(0.999)	tolerated(0.37)	deleterious(0.509)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
PSME4	23198	genome.wustl.edu	37	2	54125482	54125482	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014614.2	-1	validated	p.E1144D	0.999	77	0%	89	36%	4	100%	benign(0.036)	tolerated(0.65)	neutral(0.005)	superfamily_ARM repeat
PSME4	23198	genome.wustl.edu	37	2	54135703	54135703	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014614.2	-1	validated	e23-1	1.000	56	0%	76	28.9%	0	-	-	-	-	-
SPTBN1	6711	genome.wustl.edu	37	2	54880970	54880970	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003128.2	+1	reviewed	p.I1934	0.755	74	0%	55	27.3%	52	26.9%	-	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
EML6	400954	genome.wustl.edu	37	2	55077136	55077136	+	Nonsense_Mutation	SNP	G	G	T	rs146306448	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039753.2	+1	validated	p.E409*	1.000	135	0%	193	31.6%	0	-	-	-	-	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,superfamily_WD40 repeat-like
EML6	400954	genome.wustl.edu	37	2	55189683	55189683	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039753.2	+1	validated	p.D1665Y	1.000	127	0%	233	22.7%	0	-	probably_damaging(0.992)	deleterious(0.04)	deleterious(0.796)	superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase
C2orf63	130162	genome.wustl.edu	37	2	55436644	55436644	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152385.2	-1	validated	p.R237I	0.032	95	0%	114	27.2%	0	-	benign(0.15)	tolerated(0.19)	neutral(0.062)	NULL
C2orf63	130162	genome.wustl.edu	37	2	55449387	55449387	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152385.2	-1	validated	p.R54Q	0.989	259	0%	525	24.6%	0	-	possibly_damaging(0.79)	tolerated(0.26)	neutral(0.331)	NULL
CCDC88A	55704	genome.wustl.edu	37	2	55555483	55555483	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135597.1	-1	validated	p.R981*	1.000	111	0%	96	39.6%	1	0%	-	-	-	NULL
CCDC104	112942	genome.wustl.edu	37	2	55756044	55756044	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080667.5	+1	validated	p.D105N	1.000	96	0%	194	28.9%	67	20.8%	probably_damaging(1)	tolerated(0.17)	deleterious(0.559)	NULL
SMEK2	57223	genome.wustl.edu	37	2	55792169	55792169	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122964.1	-1	validated	p.I648	1.000	180	0%	228	33.8%	11	27.2%	-	-	-	NULL
SMEK2	57223	genome.wustl.edu	37	2	55805441	55805441	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122964.1	-1	validated	p.F502	0.001	164	0%	250	31.2%	1	100%	-	-	-	superfamily_ARM repeat
SMEK2	57223	genome.wustl.edu	37	2	55825807	55825807	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122964.1	-1	validated	p.V222	0.985	96	0%	198	33.8%	10	30%	-	-	-	HMMPfam_DUF625,superfamily_ARM repeat
SMEK2	57223	genome.wustl.edu	37	2	55831120	55831120	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122964.1	-1	validated	p.I97M	0.992	105	0%	152	47.4%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_PH domain-like
FANCL	55120	genome.wustl.edu	37	2	58449154	58449154	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114636.1	-1	reviewed	p.Q99H	0.890	235	0%	275	36%	13	53.8%	possibly_damaging(0.502)	tolerated(0.12)	neutral(0.428)	NULL
BCL11A	53335	genome.wustl.edu	37	2	60687753	60687753	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022893.3	-1	reviewed	p.T765M	1.000	143	0%	189	37.6%	6	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_C2H2 and C2HC zinc fingers
PAPOLG	64895	genome.wustl.edu	37	2	61022118	61022118	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022894.2	+1	reviewed	p.S692F	1.000	292	0%	454	30.8%	5	40%	benign(0.098)	deleterious(0.02)	neutral(0.391)	NULL
PUS10	150962	genome.wustl.edu	37	2	61180144	61180144	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144709.2	-1	validated	p.L432	0.994	402	0%	621	31.4%	0	-	-	-	-	NULL
USP34	9736	genome.wustl.edu	37	2	61493220	61493220	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014709.3	-1	validated	p.S1839Y	1.000	228	0%	321	30.2%	12	41.6%	benign(0.156)	-	-	NULL
USP34	9736	genome.wustl.edu	37	2	61546451	61546451	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014709.3	-1	validated	p.E1009*	1.000	87	0%	114	20.2%	3	0%	-	-	-	NULL
USP34	9736	genome.wustl.edu	37	2	61566712	61566712	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014709.3	-1	validated	p.D869Y	1.000	174	0%	250	30.4%	2	100%	probably_damaging(1)	-	-	NULL
XPO1	7514	genome.wustl.edu	37	2	61719615	61719615	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003400.3	-1	reviewed	p.D523A	1.000	108	0%	176	36.4%	31	32.2%	possibly_damaging(0.469)	deleterious(0)	deleterious(0.599)	superfamily_ARM-type_fold
EHBP1	23301	genome.wustl.edu	37	2	63170982	63170982	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015252.3	+1	reviewed	p.K505N	1.000	210	0%	223	30.9%	1	0%	possibly_damaging(0.737)	deleterious(0)	deleterious(0.714)	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
EHBP1	23301	genome.wustl.edu	37	2	63182737	63182737	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015252.3	+1	reviewed	p.A836V	1.000	142	0%	203	32.5%	11	9%	benign(0.01)	tolerated(0.27)	neutral(0.034)	NULL
MDH1	4190	genome.wustl.edu	37	2	63834040	63834040	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005917.2	+1	reviewed	p.F308L	1.000	147	0%	227	28.6%	198	47.4%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Ldh_1_C,superfamily_LDH C-terminal domain-like
UGP2	7360	genome.wustl.edu	37	2	64084990	64084990	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006759.3	+1	reviewed	p.R59W	1.000	196	0%	198	29.3%	43	39.5%	possibly_damaging(0.755)	tolerated(0.1)	deleterious(0.565)	HMMPfam_UDPGP,superfamily_Nucleotide-diphospho-sugar transferases
VPS54	51542	genome.wustl.edu	37	2	64160883	64160883	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016516.2	-1	reviewed	p.P555S	1.000	170	0%	161	31.7%	5	20%	probably_damaging(0.991)	tolerated(0.13)	deleterious(0.697)	NULL
VPS54	51542	genome.wustl.edu	37	2	64174532	64174532	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016516.2	-1	reviewed	p.K410N	1.000	122	0%	62	24.2%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MEIS1	4211	genome.wustl.edu	37	2	66667004	66667004	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002398.2	+1	reviewed	p.I90N	1.000	241	0%	353	32.9%	30	40%	possibly_damaging(0.947)	deleterious(0)	deleterious(0.835)	NULL
WDR92	116143	genome.wustl.edu	37	2	68358530	68358530	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138458.2	-1	validated	p.M305R	1.000	95	1.1%	157	32.5%	5	20%	benign(0)	tolerated(0.79)	neutral(0.001)	superfamily_WD40_like
PLEK	5341	genome.wustl.edu	37	2	68607522	68607522	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002664.2	+1	validated	p.F35L	1.000	93	0%	122	24.6%	1	0%	probably_damaging(0.993)	deleterious(0.02)	deleterious(0.833)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
PLEK	5341	genome.wustl.edu	37	2	68622831	68622831	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002664.2	+1	validated	p.E312D	1.000	56	0%	106	34%	2	0%	benign(0.002)	tolerated(0.84)	neutral(0.001)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
APLF	200558	genome.wustl.edu	37	2	68765185	68765185	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173545.2	+1	validated	p.S329L	0.000	142	0%	145	38.6%	0	-	benign(0)	tolerated(0.31)	neutral(0.027)	NULL
PROKR1	10887	genome.wustl.edu	37	2	68882355	68882355	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138964.2	+1	validated	p.R277C	1.000	98	0%	141	36.2%	0	-	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	HMMPfam_7tm_1,superfamily_SSF81321
PROKR1	10887	genome.wustl.edu	37	2	68882627	68882627	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138964.2	+1	validated	p.G367	0.014	84	0%	146	34.9%	0	-	-	-	-	superfamily_SSF81321
PROKR1	10887	genome.wustl.edu	37	2	68882682	68882682	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138964.2	+1	validated	p.E386*	1.000	73	0%	122	24.6%	0	-	-	-	-	NULL
BMP10	27302	genome.wustl.edu	37	2	69093085	69093085	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014482.1	-1	reviewed	p.A318D	1.000	213	0.5%	203	31.5%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	superfamily_SSF57501
ANTXR1	84168	genome.wustl.edu	37	2	69409006	69409006	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032208.2	+1	reviewed	p.R393I	1.000	119	0%	167	28.7%	10	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GFPT1	2673	genome.wustl.edu	37	2	69575380	69575380	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002056.2	-1	reviewed	p.R293Q	1.000	141	0%	256	34%	28	64.2%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	superfamily_SSF56235
NFU1	27247	genome.wustl.edu	37	2	69646700	69646700	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002755.1	-1	validated	p.F113L	0.998	82	0%	124	28.2%	24	50%	possibly_damaging(0.854)	deleterious(0.01)	deleterious(0.735)	HMMPfam_Nfu_N,superfamily_NIF_FeS_clus_asmbl_NifU-like_N
ATP6V1B1	525	genome.wustl.edu	37	2	71187132	71187132	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001692.3	+1	reviewed	p.P170H	1.000	60	0%	70	28.6%	4	50%	benign(0.149)	deleterious(0)	neutral(0.458)	HMMPfam_ATP-synt_ab,superfamily_SSF52540
MPHOSPH10	10199	genome.wustl.edu	37	2	71357856	71357856	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005791.1	+1	reviewed	p.A21S	0.969	23	0%	18	38.9%	14	28.5%	benign(0.026)	tolerated(0.08)	neutral(0.301)	HMMPfam_Mpp10
MPHOSPH10	10199	genome.wustl.edu	37	2	71361229	71361229	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005791.1	+1	reviewed	p.S307L	0.019	158	0%	327	30.3%	14	42.8%	benign(0.07)	tolerated(0.07)	neutral(0.324)	HMMPfam_Mpp10
MPHOSPH10	10199	genome.wustl.edu	37	2	71375192	71375192	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005791.1	+1	reviewed	p.V541L	0.999	206	0%	282	33.3%	34	35.2%	possibly_damaging(0.485)	deleterious(0.05)	deleterious(0.506)	HMMPfam_Mpp10
ZNF638	27332	genome.wustl.edu	37	2	71590318	71590318	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014972.1	+1	reviewed	p.R472K	1.000	121	0%	95	33.7%	8	75%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
ZNF638	27332	genome.wustl.edu	37	2	71591296	71591296	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014972.1	+1	reviewed	p.R544Q	1.000	168	0%	211	37%	12	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZNF638	27332	genome.wustl.edu	37	2	71633282	71633282	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014972.1	+1	reviewed	p.R1009*	0.480	250	0%	401	30.9%	11	18.1%	-	-	-	superfamily_RNA-binding domain RBD
ZNF638	27332	genome.wustl.edu	37	2	71650362	71650362	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014972.1	+1	reviewed	p.L1240I	0.874	72	0%	126	44.4%	4	25%	benign(0.001)	tolerated(0.31)	neutral(0.027)	NULL
EXOC6B	23233	genome.wustl.edu	37	2	72740333	72740333	+	Silent	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015189.1	-1	validated	p.V365	0.993	274	0%	290	23.4%	1	0%	-	-	-	NULL
EXOC6B	23233	genome.wustl.edu	37	2	72958328	72958328	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015189.1	-1	validated	p.R125I	1.000	140	0%	147	35.4%	7	57.1%	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	NULL
SFXN5	94097	genome.wustl.edu	37	2	73195600	73195600	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000411783	-1	known	p.R219Q	0.990	56	0%	85	30.6%	6	33.3%	unknown(0)	tolerated(0.12)	-	HMMPfam_Mtc
RAB11FIP5	26056	genome.wustl.edu	37	2	73315741	73315741	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015470.2	-1	validated	p.S335	0.316	14	0%	15	26.7%	3	33.3%	-	-	-	NULL
NOTO	344022	genome.wustl.edu	37	2	73435695	73435695	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134462.1	+1	provisional	p.K184E	0.997	129	0%	245	38%	0	-	probably_damaging(0.999)	tolerated(0.45)	deleterious(0.502)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
FBXO41	150726	genome.wustl.edu	37	2	73490351	73490351	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080410.2	-1	validated	p.L782I	0.999	67	0%	104	33.7%	0	-	possibly_damaging(0.595)	tolerated(0.08)	deleterious(0.506)	superfamily_RNI-like
EGR4	1961	genome.wustl.edu	37	2	73519769	73519769	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001965.3	-1	validated	p.E93K	1.000	37	0%	71	31%	0	-	possibly_damaging(0.653)	deleterious(0)	deleterious(0.674)	NULL
ALMS1	7840	genome.wustl.edu	37	2	73677872	73677872	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015120.4	+1	reviewed	p.K1405N	0.000	95	0%	81	17.3%	2	50%	possibly_damaging(0.55)	tolerated(0.5)	neutral(0.197)	NULL
ALMS1	7840	genome.wustl.edu	37	2	73680158	73680158	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015120.4	+1	reviewed	p.I2167	0.002	115	0%	103	27.2%	5	40%	-	-	-	NULL
ALMS1	7840	genome.wustl.edu	37	2	73717091	73717091	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015120.4	+1	reviewed	p.R2668*	0.776	98	0%	102	28.4%	1	100%	-	-	-	NULL
ALMS1	7840	genome.wustl.edu	37	2	73717890	73717890	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015120.4	+1	reviewed	p.A2934V	0.002	105	0%	210	31.4%	1	0%	benign(0)	deleterious(0.01)	neutral(0.406)	NULL
ALMS1	7840	genome.wustl.edu	37	2	73800208	73800208	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015120.4	+1	reviewed	p.S3734L	1.000	59	0%	51	35.3%	7	71.4%	benign(0.019)	tolerated(1)	neutral(0.001)	NULL
ALMS1	7840	genome.wustl.edu	37	2	73830389	73830389	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015120.4	+1	reviewed	p.N4106S	0.009	282	0%	524	32.3%	30	43.3%	benign(0)	deleterious(0.04)	neutral(0.349)	NULL
C2orf78	388960	genome.wustl.edu	37	2	74042747	74042747	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080474.1	+1	predicted	p.P466H	0.000	124	0%	245	35.5%	0	-	possibly_damaging(0.942)	tolerated(0.54)	neutral(0.395)	NULL
C2orf78	388960	genome.wustl.edu	37	2	74043719	74043719	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080474.1	+1	predicted	p.K790T	0.001	189	0%	396	10.9%	0	-	benign(0.011)	tolerated(0.19)	neutral(0.050)	NULL
STAMBP	10617	genome.wustl.edu	37	2	74058130	74058130	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006463.3	+1	reviewed	p.I49M	1.000	106	0%	174	36.8%	23	43.4%	benign(0.417)	tolerated(0.12)	neutral(0.396)	NULL
SLC4A5	57835	genome.wustl.edu	37	2	74462306	74462306	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021196.3	-1	reviewed	p.F785L	1.000	114	0%	228	32.9%	0	-	benign(0.037)	tolerated(0.54)	neutral(0.009)	HMMPfam_HCO3_cotransp
C2orf81	388963	genome.wustl.edu	37	2	74642547	74642547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145054.1	-1	predicted	p.A226T	0.000	16	0%	26	30.8%	13	23%	possibly_damaging(0.799)	tolerated(0.23)	neutral(0.342)	NULL
CCDC142	84865	genome.wustl.edu	37	2	74707982	74707982	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032779.3	-1	validated	p.Y466H	0.058	63	0%	78	37.2%	7	28.5%	benign(0)	tolerated(0.54)	neutral(0.007)	NULL
DQX1	165545	genome.wustl.edu	37	2	74746774	74746774	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133637.2	-1	validated	p.R572Q	0.928	236	0%	380	30.5%	0	-	benign(0.066)	deleterious(0.03)	neutral(0.369)	HMMPfam_DUF1605
HTRA2	27429	genome.wustl.edu	37	2	74759768	74759768	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013247.4	+1	reviewed	p.R380*	1.000	165	0%	326	37.1%	79	3.7%	-	-	-	HMMSmart_SM00228,superfamily_PDZ domain-like
HK2	3099	genome.wustl.edu	37	2	75101560	75101560	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000189.4	+1	reviewed	p.N287D	1.000	87	0%	109	30.3%	6	83.3%	probably_damaging(0.993)	deleterious(0.03)	deleterious(0.815)	HMMPfam_Hexokinase_2,superfamily_SSF53067
MRPL19	9801	genome.wustl.edu	37	2	75874021	75874021	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014763.3	+1	reviewed	p.A30T	0.000	11	0%	17	35.3%	15	66.6%	benign(0)	tolerated(0.13)	neutral(0.253)	NULL
MRPL19	9801	genome.wustl.edu	37	2	75879338	75879338	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014763.3	+1	reviewed	p.D98Y	1.000	81	0%	53	20.8%	25	28%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GCFC2	6936	genome.wustl.edu	37	2	75893127	75893127	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003203.4	-1	validated	p.S719Y	1.000	219	0%	183	31.1%	10	50%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_GCFC
LRRTM4	80059	genome.wustl.edu	37	2	77746338	77746338	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134745.1	-1	validated	p.K219N	1.000	108	0%	68	29.4%	0	-	probably_damaging(0.971)	deleterious(0.01)	deleterious(0.819)	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like
REG3A	5068	genome.wustl.edu	37	2	79384818	79384818	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002580.1	-1	reviewed	p.E114K	0.002	149	0%	160	39.4%	0	-	possibly_damaging(0.885)	tolerated(0.44)	neutral(0.358)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
CTNNA2	1496	genome.wustl.edu	37	2	80097000	80097000	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004389.3	+1	validated	p.R175H	1.000	148	0%	224	30.8%	3	66.6%	possibly_damaging(0.836)	tolerated(0.27)	neutral(0.353)	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin
CTNNA2	1496	genome.wustl.edu	37	2	80101439	80101439	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004389.3	+1	validated	p.E275K	1.000	46	0%	36	44.4%	4	75%	benign(0.023)	tolerated(0.14)	neutral(0.251)	HMMPfam_Vinculin
CTNNA2	1496	genome.wustl.edu	37	2	80874923	80874923	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004389.3	+1	validated	p.R882*	0.998	70	0%	52	42.3%	4	50%	-	-	-	NULL
DNAH6	1768	genome.wustl.edu	37	2	84752747	84752747	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001370.1	+1	validated	p.R95Q	0.989	140	0%	108	38.9%	1	0%	possibly_damaging(0.904)	tolerated(0.08)	deleterious(0.658)	NULL
DNAH6	1768	genome.wustl.edu	37	2	84771460	84771460	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001370.1	+1	validated	p.R256*	0.988	95	0%	71	32.4%	0	-	-	-	-	NULL
DNAH6	1768	genome.wustl.edu	37	2	84774398	84774398	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001370.1	+1	validated	p.R313*	1.000	155	0%	93	23.7%	0	-	-	-	-	NULL
DNAH6	1768	genome.wustl.edu	37	2	84800650	84800650	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001370.1	+1	validated	p.F621L	0.952	178	0%	187	33.2%	0	-	benign(0.253)	tolerated(0.27)	neutral(0.059)	NULL
DNAH6	1768	genome.wustl.edu	37	2	84886174	84886174	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001370.1	+1	validated	p.L1989I	0.000	177	0%	137	21.9%	0	-	benign(0.001)	tolerated(0.62)	neutral(0.004)	NULL
DNAH6	1768	genome.wustl.edu	37	2	84886244	84886244	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001370.1	+1	validated	p.S2012Y	1.000	172	0%	151	37.1%	2	50%	possibly_damaging(0.673)	deleterious(0.04)	deleterious(0.588)	NULL
DNAH6	1768	genome.wustl.edu	37	2	84899469	84899469	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001370.1	+1	validated	p.R2158Q	0.712	169	0%	182	25.8%	0	-	benign(0.017)	tolerated(0.22)	neutral(0.043)	HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH6	1768	genome.wustl.edu	37	2	84930558	84930558	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001370.1	+1	validated	p.E2701*	1.000	118	0%	124	18.5%	0	-	-	-	-	NULL
C2orf89	129293	genome.wustl.edu	37	2	85097824	85097824	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080824.1	-1	predicted	p.R65Q	0.983	55	0%	102	28.4%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
KCMF1	56888	genome.wustl.edu	37	2	85276557	85276557	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020122.4	+1	validated	p.A224T	1.000	130	0%	262	34.7%	93	48.3%	benign(0.01)	tolerated(1)	neutral(0.001)	NULL
GGCX	2677	genome.wustl.edu	37	2	85785583	85785583	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000821.4	-1	reviewed	p.F173L	1.000	74	0%	186	40.9%	26	19.2%	benign(0.004)	tolerated(0.8)	neutral(0.001)	HMMPfam_VKG_Carbox,HMMSmart_HTTM
GGCX	2677	genome.wustl.edu	37	2	85788077	85788077	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000821.4	-1	reviewed	p.I25	0.085	133	0%	257	26.8%	13	30.7%	-	-	-	NULL
PTCD3	55037	genome.wustl.edu	37	2	86360331	86360331	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017952.5	+1	validated	p.M468I	1.000	324	0%	513	32.9%	24	45.8%	possibly_damaging(0.777)	tolerated(0.35)	neutral(0.310)	NULL
KDM3A	55818	genome.wustl.edu	37	2	86676967	86676967	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018433.5	+1	reviewed	p.R75I	1.000	313	0%	329	35%	11	45.4%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
CHMP3	51652	genome.wustl.edu	37	2	86734659	86734659	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016079.2	-1	reviewed	p.E156K	1.000	375	0%	599	36.6%	115	43.4%	benign(0.015)	deleterious(0.01)	neutral(0.406)	HMMPfam_Snf7
LOC730268	730268	genome.wustl.edu	37	2	88037357	88037357	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342213.1	+1	model	p.S645R	1.000	493	0%	651	15.5%	15	6.6%	-	-	-	NULL
THNSL2	55258	genome.wustl.edu	37	2	88472860	88472860	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018271.3	+1	validated	p.G64D	0.014	81	0%	65	32.3%	1	0%	benign(0.01)	tolerated(0.55)	neutral(0.007)	superfamily_Tryptophan synthase beta subunit-like PLP-dependent enzymes
C2orf51	200523	genome.wustl.edu	37	2	88825973	88825973	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152670.2	+1	validated	p.Q26	0.004	137	0%	272	32.7%	0	-	-	-	-	NULL
RPIA	22934	genome.wustl.edu	37	2	89028845	89028845	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144563.2	+1	reviewed	p.R151Q	1.000	155	0%	163	35%	16	12.5%	benign(0.033)	tolerated(1)	neutral(0.002)	HMMPfam_Rib_5-P_isom_A,superfamily_SSF100950
RPIA	22934	genome.wustl.edu	37	2	89036173	89036173	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144563.2	+1	reviewed	p.R240*	1.000	259	0%	373	32.2%	24	12.5%	-	-	-	HMMPfam_Rib_5-P_isom_A,superfamily_SSF75445
ANKRD36BP2	645784	genome.wustl.edu	37	2	89092005	89092005	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_015424.1	+1	predicted	NULL	0.122	353	0%	346	27.5%	0	-	-	-	-	-
IGKC	3514	genome.wustl.edu	37	2	89157052	89157052	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390237	-1	known	p.R49W	0.000	245	0.4%	292	38%	3659	0%	probably_damaging(0.995)	tolerated(0.08)	deleterious(0.758)	HMMPfam_C1-set,HMMSmart_SM00407,superfamily_Immunoglobulin
IGKC	3514	genome.wustl.edu	37	2	89157139	89157139	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390237	-1	known	p.L20M	0.001	171	0%	290	30.7%	3411	0%	possibly_damaging(0.932)	deleterious(0)	deleterious(0.823)	HMMPfam_C1-set,superfamily_Immunoglobulin
IGKV3-7	28915	genome.wustl.edu	37	2	89278274	89278274	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390247	-1	known	p.E21*	0.005	234	0%	261	36.4%	0	-	-	-	-	HMMPfam_V-set,superfamily_Immunoglobulin
IGKV3-20	28912	genome.wustl.edu	37	2	89442057	89442057	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000492167	-1	known	p.P116	0.532	277	0%	322	19.6%	3	0%	-	-	-	HMMSmart_SM00409
IGKV6-21	28906	genome.wustl.edu	37	2	89459492	89459492	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390256	-1	known	p.F29V	0.394	207	0%	219	27.9%	1	0%	benign(0.183)	tolerated(0.33)	neutral(0.041)	HMMPfam_V-set,superfamily_SSF48726
IGKV2-28	28921	genome.wustl.edu	37	2	89521225	89521225	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000482769	-1	known	p.A105V	0.996	204	0%	202	14.4%	15	0%	probably_damaging(0.987)	tolerated(0.11)	deleterious(0.708)	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin
IGKV1-37	28931	genome.wustl.edu	37	2	89597190	89597190	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000465170	-1	known	p.K61R	1.000	327	0%	374	19.5%	0	-	possibly_damaging(0.613)	tolerated(0.14)	neutral(0.462)	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin
IGKV2D-29	28882	genome.wustl.edu	37	2	89987043	89987043	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000491977	+1	known	p.V108	0.231	162	0%	197	35%	2	0%	-	-	-	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
MRPS5	64969	genome.wustl.edu	37	2	95780830	95780830	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031902.3	-1	reviewed	p.P86	0.981	160	0%	267	28.5%	21	42.8%	-	-	-	NULL
LOC344065	344065	genome.wustl.edu	37	2	95880508	95880508	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_292895.7	+1	model	p.I258	1.000	58	0%	28	28.6%	1	100%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
TRIM43	129868	genome.wustl.edu	37	2	96262063	96262063	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138800.1	+1	provisional	p.E207D	0.005	501	0%	749	29.1%	0	-	benign(0)	tolerated(0.41)	neutral(0.015)	NULL
LOC400986	400986	genome.wustl.edu	37	2	96555726	96555726	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001717763.2	-1	model	p.Q609H	0.001	336	0%	110	36.4%	1	100%	possibly_damaging(0.908)	tolerated(0.15)	deleterious(0.603)	NULL
LOC400986	400986	genome.wustl.edu	37	2	96581771	96581771	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001717763.2	-1	model	p.S521	0.000	276	0%	151	37.7%	1	0%	-	-	-	NULL
ADRA2B	151	genome.wustl.edu	37	2	96781538	96781538	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000409345	-1	known	p.A117	0.186	36	0%	38	26.3%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
NCAPH	23397	genome.wustl.edu	37	2	97024853	97024853	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015341.3	+1	reviewed	p.E427*	1.000	143	0%	274	32.1%	10	10%	-	-	-	HMMPfam_Barren
FER1L5	90342	genome.wustl.edu	37	2	97357028	97357028	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113382.1	+1	provisional	p.V942M	0.000	22	0%	33	27.3%	0	-	benign(0.429)	tolerated(0.27)	neutral(0.173)	HMMSmart_SM00694
FER1L5	90342	genome.wustl.edu	37	2	97369060	97369060	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113382.1	+1	provisional	p.D1926N	0.687	79	0%	82	32.9%	0	-	probably_damaging(0.994)	tolerated(0.09)	deleterious(0.748)	NULL
FER1L5	90342	genome.wustl.edu	37	2	97369283	97369283	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113382.1	+1	provisional	p.E1941	1.000	101	0%	177	42.4%	1	0%	-	-	-	NULL
CNNM3	26505	genome.wustl.edu	37	2	97490892	97490892	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017623.4	+1	validated	p.I441	0.967	49	0%	54	25.9%	16	37.5%	-	-	-	HMMPfam_CBS
CNNM3	26505	genome.wustl.edu	37	2	97492634	97492634	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017623.4	+1	validated	p.F478L	1.000	99	0%	159	34.6%	9	33.3%	benign(0.292)	tolerated(0.07)	neutral(0.409)	NULL
SEMA4C	54910	genome.wustl.edu	37	2	97526716	97526716	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017789.4	-1	validated	p.S717G	1.000	19	0%	41	43.9%	68	45.5%	possibly_damaging(0.664)	tolerated(0.19)	neutral(0.284)	NULL
FAM178B	51252	genome.wustl.edu	37	2	97587388	97587388	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122646.2	-1	validated	p.L399	1.000	43	0%	71	29.6%	2	100%	-	-	-	NULL
FAM178B	51252	genome.wustl.edu	37	2	97626167	97626167	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122646.2	-1	validated	p.E217*	1.000	45	0%	83	25.3%	2	100%	-	-	-	NULL
ANKRD36	375248	genome.wustl.edu	37	2	97788714	97788714	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000461153	+1	known	p.I193V	0.000	367	0%	430	30.2%	0	-	benign(0)	tolerated(1)	-	HMMPfam_Ank,superfamily_Ankyrin repeat
ANKRD36	375248	genome.wustl.edu	37	2	97873558	97873558	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000461153	+1	known	p.E888D	0.002	333	0%	110	24.5%	2	50%	benign(0.018)	deleterious(0.05)	neutral(0.346)	NULL
ANKRD36	375248	genome.wustl.edu	37	2	97911336	97911336	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000461153	+1	known	p.S1474Y	0.018	216	0%	314	19.7%	3	0%	benign(0.113)	tolerated(0.06)	neutral(0.332)	NULL
ANKRD36B	57730	genome.wustl.edu	37	2	98192888	98192888	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000258459	-1	known	p.E239D	0.025	124	0%	86	27.9%	0	-	-	-	-	superfamily_Ankyrin repeat
ACTR1B	10120	genome.wustl.edu	37	2	98275871	98275871	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005735.3	-1	reviewed	p.E87K	1.000	55	0%	62	29%	35	34.2%	possibly_damaging(0.668)	deleterious(0)	deleterious(0.681)	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067
ZAP70	7535	genome.wustl.edu	37	2	98354285	98354285	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079.3	+1	reviewed	p.F516L	1.000	95	0%	126	32.5%	7	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
VWA3B	200403	genome.wustl.edu	37	2	98804511	98804511	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144992.4	+1	provisional	p.L462S	1.000	159	0%	235	32.3%	0	-	probably_damaging(0.959)	deleterious(0.01)	deleterious(0.808)	NULL
VWA3B	200403	genome.wustl.edu	37	2	98907171	98907171	+	Nonstop_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000422503	+1	known	p.*1081Y	0.000	65	0%	66	27.3%	0	-	-	-	-	NULL
COA5	493753	genome.wustl.edu	37	2	99217222	99217222	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008215.1	-1	predicted	p.G73V	1.000	308	0%	502	28.9%	57	43.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MGAT4A	11320	genome.wustl.edu	37	2	99272908	99272908	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012214.2	-1	reviewed	p.S202Y	1.000	150	0%	181	40.3%	4	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Glyco_transf_54
C2orf55	343990	genome.wustl.edu	37	2	99412702	99412702	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207362.2	-1	validated	p.V877A	1.000	171	0%	240	33.8%	3	0%	unknown(0)	deleterious(0)	-	NULL
TSGA10	80705	genome.wustl.edu	37	2	99725330	99725330	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025244.2	-1	validated	p.S59Y	1.000	233	0%	219	28.3%	3	33.3%	possibly_damaging(0.855)	deleterious(0.01)	deleterious(0.736)	NULL
C2orf15	150590	genome.wustl.edu	37	2	99766962	99766962	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144706.2	+1	predicted	p.T15A	0.352	27	0%	59	42.4%	3	66.6%	possibly_damaging(0.865)	-	-	NULL
REV1	51455	genome.wustl.edu	37	2	100022458	100022458	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016316.2	-1	reviewed	p.S909P	0.985	132	0%	128	27.3%	14	21.4%	benign(0)	tolerated(0.14)	neutral(0.249)	NULL
REV1	51455	genome.wustl.edu	37	2	100027262	100027262	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000438366	-1	known	p.W17*	0.998	208	0%	274	36.5%	4	75%	possibly_damaging(0.933)	deleterious(0.04)	deleterious(0.728)	superfamily_Lesion bypass DNA polymerase (Y-family) little finger domain
CHST10	9486	genome.wustl.edu	37	2	101010058	101010058	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004854.3	-1	validated	p.F240	0.999	197	0%	277	34.7%	3	33.3%	-	-	-	HMMPfam_Sulfotransfer_2
TBC1D8	11138	genome.wustl.edu	37	2	101624655	101624655	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102426.1	-1	validated	p.I1017	0.650	35	0%	40	22.5%	16	31.2%	-	-	-	NULL
TBC1D8	11138	genome.wustl.edu	37	2	101638191	101638191	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102426.1	-1	validated	p.E912*	1.000	202	0%	339	25.7%	10	0%	-	-	-	superfamily_EF-hand
LOC100288163	100288163	genome.wustl.edu	37	2	101890950	101890950	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342243.1	-1	model	p.F36V	1.000	11	0%	11	45.5%	29	58.6%	-	-	-	HMMPfam_Pro_isomerase,superfamily_Cyclophilin-like
RNF149	284996	genome.wustl.edu	37	2	101902625	101902625	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173647.3	-1	validated	p.R293I	1.000	151	0%	212	35.8%	33	36.3%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMSmart_RING,HMMPfam_zf-C3HC4,superfamily_SSF57850
RFX8	731220	genome.wustl.edu	37	2	102019213	102019213	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145664.1	-1	validated	p.G310	0.994	42	0%	83	28.9%	0	-	-	-	-	NULL
IL1R1	3554	genome.wustl.edu	37	2	102793015	102793015	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000877.2	+1	reviewed	p.S502	0.962	158	0.6%	199	31.2%	7	28.5%	-	-	-	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain
IL1RL2	8808	genome.wustl.edu	37	2	102842370	102842370	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003854.2	+1	reviewed	p.R335Q	0.000	236	0%	329	31%	0	-	benign(0.027)	tolerated(0.57)	neutral(0.007)	NULL
IL1RL2	8808	genome.wustl.edu	37	2	102855677	102855677	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003854.2	+1	reviewed	p.K568N	0.000	165	0%	273	27.8%	0	-	benign(0.382)	deleterious(0)	deleterious(0.567)	NULL
IL1RL1	9173	genome.wustl.edu	37	2	102968093	102968093	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016232.4	+1	reviewed	p.E461	1.000	90	0%	141	35.5%	0	-	-	-	-	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain
IL18R1	8809	genome.wustl.edu	37	2	102988511	102988511	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003855.2	+1	reviewed	p.K134T	0.004	64	0%	69	34.8%	0	-	benign(0.002)	tolerated(0.35)	neutral(0.021)	superfamily_SSF48726
IL18RAP	8807	genome.wustl.edu	37	2	103039793	103039793	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003853.2	+1	reviewed	p.G19E	0.001	425	0%	422	28%	0	-	benign(0.134)	deleterious(0)	neutral(0.456)	NULL
IL18RAP	8807	genome.wustl.edu	37	2	103040386	103040386	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003853.2	+1	reviewed	p.L62	0.000	130	0%	195	36.9%	0	-	-	-	-	NULL
IL18RAP	8807	genome.wustl.edu	37	2	103067461	103067461	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003853.2	+1	reviewed	p.R455I	1.000	143	0%	159	32.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain
SLC9A4	389015	genome.wustl.edu	37	2	103095696	103095696	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001011552.3	+1	validated	p.R219C	0.000	66	0%	64	37.5%	1	100%	benign(0.005)	tolerated(0.05)	neutral(0.345)	HMMPfam_Na_H_Exchanger
SLC9A2	6549	genome.wustl.edu	37	2	103274063	103274063	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003048.3	+1	validated	p.E110D	1.000	227	0%	386	33.4%	1	100%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	HMMPfam_Na_H_Exchanger
LOC644265	644265	genome.wustl.edu	37	2	104240286	104240286	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_927443.2	+1	model	p.D85Y	0.012	54	0%	61	26.2%	1	0%	-	-	-	HMMPfam_F_actin_cap_B,superfamily_Subunits of heterodimeric actin filament capping protein Capz
NCK2	8440	genome.wustl.edu	37	2	106471619	106471619	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004720.2	+1	reviewed	p.D34N	1.000	91	0%	118	37.3%	39	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3
C2orf40	84417	genome.wustl.edu	37	2	106690449	106690449	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032411.2	+1	validated	p.E79K	0.998	61	0%	67	26.9%	1	0%	benign(0.235)	deleterious(0.04)	neutral(0.372)	NULL
ENSG00000169659	0	genome.wustl.edu	37	2	107004097	107004097	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000324709	+1	known	p.D90Y	0.005	330	0%	468	25.2%	0	-	-	-	-	HMMPfam_PAN_1,HMMSmart_PAN_AP,superfamily_SSF57414
RGPD3	653489	genome.wustl.edu	37	2	107041132	107041132	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144013.1	-1	validated	p.R1097	0.985	142	0%	205	30.7%	0	-	-	-	-	HMMPfam_Ran_BP1,superfamily_SSF50729
RGPD3	653489	genome.wustl.edu	37	2	107042469	107042469	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144013.1	-1	validated	p.A894V	1.000	336	0%	344	14.8%	1	0%	benign(0.051)	tolerated(0.06)	neutral(0.326)	NULL
RGPD3	653489	genome.wustl.edu	37	2	107050687	107050687	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144013.1	-1	validated	p.K734N	0.388	495	0%	716	27.8%	0	-	benign(0.378)	tolerated(0.47)	neutral(0.132)	NULL
RGPD3	653489	genome.wustl.edu	37	2	107084704	107084704	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144013.1	-1	validated	p.S14L	1.000	59	0%	51	23.5%	0	-	possibly_damaging(0.903)	deleterious(0.04)	deleterious(0.707)	NULL
RGPD4	285190	genome.wustl.edu	37	2	108453075	108453075	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182588.2	+1	validated	p.F30L	0.997	158	0%	140	26.4%	0	-	possibly_damaging(0.892)	tolerated(0.41)	neutral(0.366)	superfamily_SSF48452
RGPD4	285190	genome.wustl.edu	37	2	108455408	108455408	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182588.2	+1	validated	p.I131M	0.912	408	0%	624	26%	0	-	possibly_damaging(0.836)	deleterious(0.04)	deleterious(0.668)	superfamily_SSF48452
RGPD4	285190	genome.wustl.edu	37	2	108478152	108478152	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182588.2	+1	validated	p.K721Q	1.000	664	0%	975	22.5%	0	-	probably_damaging(0.958)	deleterious(0.04)	deleterious(0.750)	NULL
RGPD4	285190	genome.wustl.edu	37	2	108487346	108487346	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182588.2	+1	validated	p.I962M	0.997	471	0%	513	22.2%	1	0%	benign(0.178)	tolerated(0.15)	neutral(0.258)	NULL
GCC2	9648	genome.wustl.edu	37	2	109086983	109086983	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181453.3	+1	reviewed	p.V400I	0.001	34	0%	39	28.2%	2	50%	benign(0.001)	tolerated(0.74)	neutral(0.002)	NULL
GCC2	9648	genome.wustl.edu	37	2	109124081	109124081	+	Nonsense_Mutation	SNP	C	C	T	rs185024170	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181453.3	+1	reviewed	p.R1684*	0.996	314	0%	361	30.2%	5	40%	-	-	-	NULL
RANBP2	5903	genome.wustl.edu	37	2	109380602	109380602	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006267.4	+1	reviewed	p.R1203C	1.000	60	0%	68	27.9%	6	0%	unknown(0)	-	-	HMMPfam_Ran_BP1,HMMSmart_RanBD,superfamily_SSF50729
RANBP2	5903	genome.wustl.edu	37	2	109383155	109383155	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006267.4	+1	reviewed	p.E2054*	1.000	200	0%	292	28.8%	7	28.5%	-	-	-	HMMPfam_Ran_BP1,HMMSmart_RanBD,superfamily_SSF50729
EDAR	10913	genome.wustl.edu	37	2	109527529	109527529	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022336.3	-1	reviewed	e6-1	1.000	133	0%	193	36.8%	0	-	-	-	-	-
NPHP1	4867	genome.wustl.edu	37	2	110902078	110902078	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000272.3	-1	reviewed	p.S530F	0.983	155	0%	176	30.7%	11	36.3%	probably_damaging(0.96)	deleterious(0.02)	deleterious(0.786)	NULL
LOC100288570	100288570	genome.wustl.edu	37	2	111144440	111144440	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342255.1	-1	model	p.L204	0.998	49	0%	60	18.3%	0	-	-	-	-	NULL
ANAPC1	64682	genome.wustl.edu	37	2	112576464	112576464	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022662.2	-1	validated	p.H1093P	1.000	123	0%	181	26%	9	11.1%	possibly_damaging(0.923)	tolerated(0.23)	neutral(0.414)	NULL
ANAPC1	64682	genome.wustl.edu	37	2	112615884	112615884	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022662.2	-1	validated	p.R453C	1.000	108	0%	177	24.3%	3	66.6%	probably_damaging(1)	tolerated(0.19)	deleterious(0.549)	NULL
MERTK	10461	genome.wustl.edu	37	2	112687021	112687021	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006343.2	+1	reviewed	p.S129Y	0.960	136	0%	300	33.7%	0	-	probably_damaging(0.977)	tolerated(0.69)	neutral(0.421)	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726
ZC3H6	376940	genome.wustl.edu	37	2	113082687	113082687	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198581.2	+1	validated	p.A667T	1.000	129	0%	174	24.7%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
RGPD8	727851	genome.wustl.edu	37	2	113146915	113146915	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000302558	-1	known	p.D1203Y	1.000	50	0%	62	19.4%	3	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
TTL	150465	genome.wustl.edu	37	2	113240002	113240002	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153712.4	+1	validated	p.W27*	1.000	17	0%	15	26.7%	1	0%	-	-	-	NULL
TTL	150465	genome.wustl.edu	37	2	113258824	113258824	+	Missense_Mutation	SNP	G	G	A	rs2943625	byCluster	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153712.4	+1	validated	p.D171N	1.000	132	0%	164	28%	10	70%	benign(0.029)	tolerated(0.18)	neutral(0.058)	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like
POLR1B	84172	genome.wustl.edu	37	2	113308544	113308544	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019014.4	+1	validated	p.E243*	1.000	253	0%	491	31.8%	3	33.3%	-	-	-	HMMPfam_RNA_pol_Rpb2_1,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase
IL36B	27177	genome.wustl.edu	37	2	113780298	113780298	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014438.3	-1	reviewed	p.D150Y	0.012	422	0%	360	30.3%	0	-	unknown(0)	-	-	superfamily_Cytokine
IL36B	27177	genome.wustl.edu	37	2	113786606	113786606	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014438.3	-1	reviewed	p.E57D	0.000	306	0%	361	32.4%	0	-	benign(0.001)	tolerated(0.95)	-	superfamily_Cytokine
CBWD2	150472	genome.wustl.edu	37	2	114252803	114252803	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172003.3	+1	validated	p.R353I	1.000	373	0%	490	26.5%	8	62.5%	possibly_damaging(0.938)	tolerated(0.18)	neutral(0.440)	HMMPfam_CobW_C,superfamily_Cbl_biosynth_CobW-like_C
MIR1302-3	100302128	genome.wustl.edu	37	2	114340575	114340575	+	RNA	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000408128	-1	known	NULL	0.002	307	0%	468	13.9%	0	-	-	-	-	-
SLC35F5	80255	genome.wustl.edu	37	2	114493430	114493430	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025181.2	-1	provisional	p.F252L	1.000	83	0%	57	40.4%	14	64.2%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_DUF6,superfamily_Multidrug resistance efflux transporter EmrE
DPP10	57628	genome.wustl.edu	37	2	116599880	116599880	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020868.3	+1	validated	p.E784*	1.000	156	0%	227	34.4%	0	-	-	-	-	HMMPfam_Peptidase_S9
DDX18	8886	genome.wustl.edu	37	2	118582580	118582580	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006773.3	+1	reviewed	p.R424Q	1.000	218	0%	326	30.7%	24	54.1%	benign(0.012)	tolerated(0.53)	neutral(0.008)	superfamily_SSF52540
DDX18	8886	genome.wustl.edu	37	2	118586870	118586870	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006773.3	+1	reviewed	p.E566D	0.986	143	0%	155	32.3%	31	51.6%	benign(0.006)	deleterious(0.01)	neutral(0.406)	superfamily_SSF52540
DDX18	8886	genome.wustl.edu	37	2	118588172	118588172	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006773.3	+1	reviewed	p.E629*	0.468	164	0.6%	285	31.9%	42	59.5%	-	-	-	NULL
DDX18	8886	genome.wustl.edu	37	2	118588267	118588267	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006773.3	+1	reviewed	p.K660N	0.998	137	0%	240	31.2%	52	34.6%	benign(0.009)	tolerated(0.09)	neutral(0.297)	NULL
CCDC93	54520	genome.wustl.edu	37	2	118703115	118703115	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019044.3	-1	validated	p.M447T	0.756	89	0%	148	23%	5	40%	possibly_damaging(0.459)	tolerated(0.39)	neutral(0.166)	NULL
CCDC93	54520	genome.wustl.edu	37	2	118732843	118732843	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019044.3	-1	validated	p.K224T	0.999	259	0%	311	30.9%	5	40%	probably_damaging(0.992)	tolerated(0.19)	deleterious(0.497)	NULL
MARCO	8685	genome.wustl.edu	37	2	119731911	119731911	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006770.3	+1	reviewed	p.L155I	0.700	147	0%	211	34.1%	0	-	unknown(0)	-	-	NULL
MARCO	8685	genome.wustl.edu	37	2	119750012	119750012	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006770.3	+1	reviewed	p.S404	0.456	288	0.3%	416	31.2%	0	-	-	-	-	NULL
MARCO	8685	genome.wustl.edu	37	2	119750728	119750728	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006770.3	+1	reviewed	p.V427	0.000	177	0%	232	35.3%	0	-	-	-	-	HMMPfam_SRCR,PatternScan_SRCR_1,HMMSmart_SM00202,superfamily_SRCR-like
STEAP3	55240	genome.wustl.edu	37	2	120005311	120005311	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182915.2	+1	validated	p.L193	0.000	34	0%	32	31.2%	3	66.6%	-	-	-	HMMPfam_F420_oxidored,superfamily_NAD(P)-binding Rossmann-fold domains
PCDP1	200373	genome.wustl.edu	37	2	120369305	120369305	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029996.3	+1	validated	p.R147H	0.000	169	0%	189	28.6%	1	100%	benign(0.21)	tolerated(0.14)	neutral(0.270)	NULL
TMEM177	80775	genome.wustl.edu	37	2	120438923	120438923	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105198.1	+1	validated	p.T165I	0.006	41	0%	54	29.6%	22	40.9%	benign(0.012)	tolerated(0.17)	neutral(0.059)	NULL
PTPN4	5775	genome.wustl.edu	37	2	120714490	120714490	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002830.2	+1	reviewed	p.R684K	1.000	110	0%	107	33.6%	4	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
TSN	7247	genome.wustl.edu	37	2	122522878	122522878	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004622.2	+1	reviewed	p.V208L	1.000	113	0%	160	26.3%	45	37.7%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_Translin,superfamily_Translin
CNTNAP5	129684	genome.wustl.edu	37	2	125530386	125530386	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130773.2	+1	reviewed	p.E847D	1.000	342	0%	434	36.9%	0	-	possibly_damaging(0.671)	tolerated(0.38)	neutral(0.256)	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2
MAP3K2	10746	genome.wustl.edu	37	2	128095323	128095323	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006609.3	-1	reviewed	p.G52V	1.000	198	0%	228	25.4%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_PB1,HMMSmart_SM00666
MYO7B	4648	genome.wustl.edu	37	2	128341701	128341701	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080527.1	+1	provisional	p.E450K	1.000	101	0%	127	31.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO7B	4648	genome.wustl.edu	37	2	128393334	128393334	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080527.1	+1	provisional	p.S1927L	0.520	57	0%	66	43.9%	0	-	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295
LIMS2	55679	genome.wustl.edu	37	2	128397848	128397848	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017980.4	-1	validated	p.D291N	1.000	28	0%	56	30.4%	20	0%	possibly_damaging(0.813)	deleterious(0.03)	deleterious(0.671)	HMMPfam_LIM,HMMSmart_LIM,superfamily_SSF57716
GPR17	2840	genome.wustl.edu	37	2	128408761	128408761	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005291.2	+1	validated	p.A179D	1.000	50	0%	87	32.2%	0	-	probably_damaging(0.977)	deleterious(0.01)	deleterious(0.825)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
GPR17	2840	genome.wustl.edu	37	2	128409053	128409053	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005291.2	+1	validated	p.F276	0.988	95	0%	124	33.9%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
SAP130	79595	genome.wustl.edu	37	2	128757907	128757907	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024545.3	-1	validated	p.K357Q	1.000	432	0.5%	833	33.4%	13	23%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
UGGT1	56886	genome.wustl.edu	37	2	128880800	128880800	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020120.3	+1	validated	p.E372K	1.000	63	0%	111	30.6%	5	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
UGGT1	56886	genome.wustl.edu	37	2	128917189	128917189	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020120.3	+1	validated	p.Q819H	0.992	113	0%	181	40.9%	10	20%	benign(0.008)	tolerated(0.17)	neutral(0.059)	NULL
POTEF	728378	genome.wustl.edu	37	2	130833023	130833023	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099771.2	-1	validated	p.K674N	0.044	138	0%	259	29.3%	0	-	possibly_damaging(0.873)	deleterious(0)	deleterious(0.784)	NULL
TUBA3E	112714	genome.wustl.edu	37	2	130951526	130951526	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207312.2	-1	validated	p.E297K	1.000	154	0%	242	30.6%	0	-	possibly_damaging(0.926)	deleterious(0)	deleterious(0.819)	superfamily_Tub_FtsZ_C,HMMPfam_Tubulin_C
CFC1	55997	genome.wustl.edu	37	2	131356288	131356288	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032545.2	-1	reviewed	p.F58	0.000	212	0%	242	16.9%	0	-	-	-	-	NULL
LOC653781	653781	genome.wustl.edu	37	2	131390210	131390210	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_929706.3	+1	model	p.E427K	0.001	478	0%	523	13.2%	0	-	unknown(0)	deleterious(0)	-	NULL
GPR148	344561	genome.wustl.edu	37	2	131487646	131487646	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207364.2	+1	validated	p.L308I	0.103	43	0%	56	21.4%	0	-	possibly_damaging(0.864)	deleterious(0.04)	deleterious(0.683)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
FAM123C	205147	genome.wustl.edu	37	2	131519664	131519664	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105193.1	+1	validated	p.K7Q	1.000	21	0%	20	45%	0	-	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	NULL
FAM123C	205147	genome.wustl.edu	37	2	131520144	131520144	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105193.1	+1	validated	p.R167W	0.262	27	0%	42	28.6%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_WTX
GPR39	2863	genome.wustl.edu	37	2	133402871	133402871	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001508.2	+1	validated	p.R352W	1.000	58	0%	91	41.8%	101	69.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Family A G protein-coupled receptor-like
NCKAP5	344148	genome.wustl.edu	37	2	133539987	133539987	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207363.2	-1	validated	p.A1466V	1.000	150	0%	201	35.8%	2	0%	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	NULL
NCKAP5	344148	genome.wustl.edu	37	2	133541319	133541319	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207363.2	-1	validated	p.A1022D	0.071	90	1.1%	180	34.4%	0	-	possibly_damaging(0.49)	tolerated(0.4)	neutral(0.179)	NULL
NCKAP5	344148	genome.wustl.edu	37	2	133541980	133541980	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207363.2	-1	validated	p.K802Q	1.000	202	0%	248	29.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NCKAP5	344148	genome.wustl.edu	37	2	133547753	133547753	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207363.2	-1	validated	p.A312V	0.936	216	0%	248	36.3%	1	0%	unknown(0)	deleterious(0.03)	-	NULL
NCKAP5	344148	genome.wustl.edu	37	2	133971307	133971307	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000427594	-1	known	p.E59*	0.993	203	0%	209	33%	1	0%	benign(0.033)	deleterious(0)	neutral(0.446)	NULL
MGAT5	4249	genome.wustl.edu	37	2	135027964	135027964	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002410.3	+1	validated	p.K83N	1.000	211	0%	276	33.7%	9	22.2%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	NULL
MGAT5	4249	genome.wustl.edu	37	2	135075130	135075130	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002410.3	+1	validated	p.V146A	1.000	181	0%	233	31.8%	5	60%	benign(0)	tolerated(0.26)	neutral(0.034)	NULL
MGAT5	4249	genome.wustl.edu	37	2	135095981	135095981	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002410.3	+1	validated	p.K266T	1.000	64	0%	38	34.2%	8	62.5%	possibly_damaging(0.777)	tolerated(0.28)	neutral(0.322)	NULL
CCNT2	905	genome.wustl.edu	37	2	135710987	135710987	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_058241.1	+1	reviewed	p.S321Y	1.000	143	0%	285	32.3%	2	0%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	NULL
CCNT2	905	genome.wustl.edu	37	2	135711614	135711614	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_058241.1	+1	reviewed	p.S530Y	1.000	43	0%	86	33.7%	11	63.6%	possibly_damaging(0.688)	deleterious(0)	deleterious(0.691)	NULL
YSK4	80122	genome.wustl.edu	37	2	135745356	135745356	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025052.3	-1	validated	p.E362D	0.003	119	0%	179	42.5%	0	-	benign(0)	tolerated(0.63)	neutral(0.004)	NULL
RAB3GAP1	22930	genome.wustl.edu	37	2	135848633	135848633	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012233.2	+1	reviewed	p.F72L	0.999	178	0%	241	32.8%	7	71.4%	probably_damaging(0.999)	tolerated(0.4)	deleterious(0.506)	NULL
RAB3GAP1	22930	genome.wustl.edu	37	2	135878432	135878432	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012233.2	+1	reviewed	p.R231Q	1.000	479	0%	705	35.2%	17	41.1%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	NULL
ZRANB3	84083	genome.wustl.edu	37	2	136026677	136026677	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032143.2	-1	provisional	p.F414C	1.000	180	0%	282	30.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases
R3HDM1	23518	genome.wustl.edu	37	2	136362420	136362420	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015361.2	+1	provisional	p.R2M	1.000	147	0%	192	33.3%	1	0%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	NULL
R3HDM1	23518	genome.wustl.edu	37	2	136467739	136467739	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015361.2	+1	provisional	p.Y857D	0.990	135	0%	291	33.3%	13	38.4%	probably_damaging(0.963)	deleterious(0.02)	deleterious(0.788)	NULL
LCT	3938	genome.wustl.edu	37	2	136558187	136558187	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002299.2	-1	reviewed	p.R1619I	0.996	111	0.9%	201	33.8%	0	-	possibly_damaging(0.928)	deleterious(0.03)	deleterious(0.740)	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat
LCT	3938	genome.wustl.edu	37	2	136570187	136570187	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002299.2	-1	reviewed	p.L683M	1.000	127	0%	216	27.8%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat
MCM6	4175	genome.wustl.edu	37	2	136630272	136630272	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005915.4	-1	reviewed	p.F83L	1.000	201	0%	342	24.3%	14	35.7%	benign(0.085)	deleterious(0)	neutral(0.451)	superfamily_Nucleic acid-binding proteins
THSD7B	80731	genome.wustl.edu	37	2	137814622	137814622	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080427.1	+1	provisional	p.E227*	0.991	128	0%	183	31.7%	0	-	-	-	-	NULL
THSD7B	80731	genome.wustl.edu	37	2	138208587	138208587	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080427.1	+1	provisional	p.K1013N	1.000	164	0%	178	32%	0	-	probably_damaging(0.998)	tolerated(0.31)	deleterious(0.501)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
LOC440917	440917	genome.wustl.edu	37	2	139046423	139046423	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_041289.2	-1	model	NULL	0.268	54	0%	58	37.9%	0	-	-	-	-	-
SPOPL	339745	genome.wustl.edu	37	2	139316680	139316680	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001664.2	+1	validated	p.L190S	1.000	194	0%	189	34.9%	3	33.3%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_BTB/POZ_fold,HMMPfam_BTB
LRP1B	53353	genome.wustl.edu	37	2	141081479	141081479	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.R4166H	1.000	102	0%	54	31.5%	0	-	probably_damaging(0.957)	tolerated(0.07)	deleterious(0.720)	superfamily_SSF63825
LRP1B	53353	genome.wustl.edu	37	2	141116421	141116421	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.C3742	0.996	283	0%	98	36.7%	0	-	-	-	-	HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich
LRP1B	53353	genome.wustl.edu	37	2	141116470	141116470	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.N3726T	1.000	278	0%	80	28.7%	0	-	benign(0.11)	tolerated(0.13)	neutral(0.261)	HMMSmart_LDLa,superfamily_LDL_rcpt_classA_cys-rich
LRP1B	53353	genome.wustl.edu	37	2	141128794	141128794	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.S3610Y	1.000	87	0%	26	34.6%	0	-	probably_damaging(0.961)	tolerated(0.05)	deleterious(0.750)	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich
LRP1B	53353	genome.wustl.edu	37	2	141130642	141130642	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.A3568E	0.768	414	0%	305	33.4%	0	-	benign(0.15)	tolerated(1)	neutral(0.013)	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich
LRP1B	53353	genome.wustl.edu	37	2	141135856	141135856	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	e68-1	1.000	175	0%	193	32.1%	0	-	-	-	-	-
LRP1B	53353	genome.wustl.edu	37	2	141201978	141201978	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.K3405N	1.000	420	0%	417	29.3%	0	-	possibly_damaging(0.929)	tolerated(1)	neutral(0.376)	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,superfamily_LDL_rcpt_classA_cys-rich
LRP1B	53353	genome.wustl.edu	37	2	141242976	141242976	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.P3121S	1.000	291	0%	258	27.5%	0	-	probably_damaging(0.998)	tolerated(0.13)	deleterious(0.727)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
LRP1B	53353	genome.wustl.edu	37	2	141283535	141283535	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.K2635T	1.000	212	0%	107	36.4%	0	-	possibly_damaging(0.829)	tolerated(0.17)	neutral(0.373)	superfamily_LDL_rcpt_classA_cys-rich,superfamily_SSF63825
LRP1B	53353	genome.wustl.edu	37	2	141571368	141571368	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.S1739	0.019	264	0%	210	29%	0	-	-	-	-	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
LRP1B	53353	genome.wustl.edu	37	2	141625667	141625667	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	e26+1	1.000	104	0%	47	38.3%	0	-	-	-	-	-
LRP1B	53353	genome.wustl.edu	37	2	141739771	141739771	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.E949K	1.000	159	0%	87	27.6%	0	-	possibly_damaging(0.748)	deleterious(0.04)	deleterious(0.623)	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich
LRP1B	53353	genome.wustl.edu	37	2	141806573	141806573	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.E591*	1.000	267	0%	203	27.6%	0	-	-	-	-	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
LRP1B	53353	genome.wustl.edu	37	2	141819774	141819774	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.R361Q	1.000	209	0%	73	35.6%	0	-	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
LRP1B	53353	genome.wustl.edu	37	2	142238077	142238077	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018557.2	-1	validated	p.C77	0.999	124	0%	140	30.7%	0	-	-	-	-	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,superfamily_LDL_rcpt_classA_cys-rich
KYNU	8942	genome.wustl.edu	37	2	143712389	143712389	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003937.2	+1	reviewed	p.E128D	0.769	199	0%	183	29.5%	3	0%	benign(0)	tolerated(0.17)	neutral(0.059)	HMMPfam_Aminotran_5,superfamily_PLP-dependent transferases
KYNU	8942	genome.wustl.edu	37	2	143799614	143799614	+	Splice_Site	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003937.2	+1	reviewed	e13-2	0.992	223	0%	140	32.1%	1	0%	-	-	-	-
ARHGAP15	55843	genome.wustl.edu	37	2	143959745	143959745	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018460.3	+1	validated	p.D70Y	0.999	206	0%	95	35.8%	0	-	possibly_damaging(0.822)	deleterious(0.03)	deleterious(0.675)	NULL
ARHGAP15	55843	genome.wustl.edu	37	2	144194600	144194600	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018460.3	+1	validated	p.R231I	1.000	118	0%	127	33.9%	1	0%	probably_damaging(0.996)	tolerated(0.09)	deleterious(0.758)	NULL
ARHGAP15	55843	genome.wustl.edu	37	2	144245038	144245038	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018460.3	+1	validated	p.T267N	1.000	111	0%	106	28.3%	1	0%	probably_damaging(0.969)	deleterious(0.03)	deleterious(0.776)	NULL
ZEB2	9839	genome.wustl.edu	37	2	145161573	145161573	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014795.3	-1	reviewed	p.E239D	1.000	326	0%	429	38%	2	0%	benign(0.004)	tolerated(0.59)	neutral(0.004)	superfamily_SSF57667
MBD5	55777	genome.wustl.edu	37	2	149227081	149227081	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018328.4	+1	reviewed	p.N523K	1.000	125	0%	134	34.3%	4	25%	possibly_damaging(0.873)	tolerated(0.17)	neutral(0.398)	NULL
MBD5	55777	genome.wustl.edu	37	2	149241079	149241079	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000416015	+1	known	p.P713Q	1.000	51	0%	82	40.2%	0	-	-	-	-	NULL
KIF5C	3800	genome.wustl.edu	37	2	149806436	149806436	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000435030	+1	known	p.I266	1.000	221	0%	386	35%	1	0%	-	-	-	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIF5C	3800	genome.wustl.edu	37	2	149837968	149837968	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000435030	+1	known	p.L488I	1.000	126	0%	143	37.8%	1	100%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
LYPD6B	130576	genome.wustl.edu	37	2	150061778	150061778	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177964.3	+1	provisional	p.S30L	0.002	86	0%	101	32.7%	18	27.7%	benign(0.429)	deleterious(0)	deleterious(0.584)	NULL
RND3	390	genome.wustl.edu	37	2	151343888	151343888	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005168.3	-1	validated	p.I15S	1.000	278	0%	306	37.9%	30	60%	benign(0.001)	tolerated(0.26)	neutral(0.034)	NULL
RBM43	375287	genome.wustl.edu	37	2	152108066	152108066	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198557.2	-1	validated	p.P143H	0.000	113	0%	106	23.6%	1	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
RBM43	375287	genome.wustl.edu	37	2	152112107	152112107	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198557.2	-1	validated	p.D52Y	0.332	168	0%	257	31.5%	4	25%	probably_damaging(0.959)	deleterious(0.02)	deleterious(0.786)	NULL
TNFAIP6	7130	genome.wustl.edu	37	2	152222632	152222632	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007115.2	+1	reviewed	p.P99T	1.000	194	0%	362	32.6%	0	-	benign(0.066)	deleterious(0)	neutral(0.449)	HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,superfamily_C-type lectin-like
RIF1	55183	genome.wustl.edu	37	2	152293377	152293377	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018151.4	+1	reviewed	p.R411Q	0.993	66	0%	96	34.4%	1	100%	unknown(0)	-	-	superfamily_ARM repeat
RIF1	55183	genome.wustl.edu	37	2	152314404	152314404	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018151.4	+1	reviewed	p.R928*	0.994	152	0%	222	27.5%	2	50%	-	-	-	superfamily_ARM repeat
RIF1	55183	genome.wustl.edu	37	2	152317790	152317790	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018151.4	+1	reviewed	p.L1072F	1.000	81	0%	116	26.7%	3	66.6%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	superfamily_ARM repeat
NEB	4703	genome.wustl.edu	37	2	152364621	152364621	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004543.4	-1	reviewed	p.K6082N	1.000	339	0%	382	37.4%	3	33.3%	probably_damaging(1)	-	-	HMMPfam_Nebulin,HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152422031	152422031	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004543.4	-1	reviewed	p.S4416Y	1.000	206	0%	212	32.1%	0	-	possibly_damaging(0.904)	deleterious(0.01)	deleterious(0.764)	HMMPfam_Nebulin,HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152426677	152426677	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004543.4	-1	reviewed	p.R4082H	0.998	113	0%	151	39.1%	0	-	benign(0.02)	deleterious(0.01)	neutral(0.407)	HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152466346	152466346	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004543.4	-1	reviewed	p.K3860Q	1.000	265	0%	420	30.2%	0	-	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	HMMPfam_Nebulin,HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152470976	152470976	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004543.4	-1	reviewed	p.K3562N	1.000	344	0%	433	30.5%	0	-	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	HMMPfam_Nebulin,HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152487301	152487301	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004543.4	-1	reviewed	p.K2974N	1.000	373	0%	497	32.6%	1	0%	probably_damaging(1)	tolerated(0.16)	deleterious(0.559)	HMMPfam_Nebulin
NEB	4703	genome.wustl.edu	37	2	152573988	152573988	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004543.4	-1	reviewed	p.P255H	0.867	349	0%	501	37.1%	0	-	benign(0.204)	tolerated(0.17)	neutral(0.079)	HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152581465	152581465	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004543.4	-1	reviewed	p.R138Q	1.000	314	0%	450	35.3%	0	-	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMPfam_Nebulin,HMMSmart_SM00227
NEB	4703	genome.wustl.edu	37	2	152582002	152582002	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004543.4	-1	reviewed	p.R123C	1.000	417	0%	434	27.9%	0	-	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMPfam_Nebulin,HMMSmart_SM00227
CACNB4	785	genome.wustl.edu	37	2	152739812	152739812	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000726.3	-1	reviewed	p.R74*	1.000	215	0%	283	29.3%	0	-	-	-	-	superfamily_SH3-domain
STAM2	10254	genome.wustl.edu	37	2	152980450	152980450	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005843.4	-1	reviewed	e13-1	1.000	99	0%	149	30.9%	2	50%	-	-	-	-
FMNL2	114793	genome.wustl.edu	37	2	153415314	153415314	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052905.3	+1	reviewed	p.L140	0.999	355	0%	363	34.7%	4	25%	-	-	-	HMMPfam_Drf_GBD
GALNT13	114805	genome.wustl.edu	37	2	155099346	155099346	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052917.2	+1	validated	p.T205N	1.000	110	0%	125	31.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
GALNT13	114805	genome.wustl.edu	37	2	155306972	155306972	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052917.2	+1	validated	p.S527F	1.000	96	1%	75	30.7%	1	0%	benign(0.051)	deleterious(0.04)	neutral(0.352)	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,superfamily_Ricin B-like lectins
KCNJ3	3760	genome.wustl.edu	37	2	155711283	155711283	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002239.2	+1	reviewed	p.L322I	1.000	324	0%	296	33.1%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_IRK,superfamily_Ig_E-set
GALNT5	11227	genome.wustl.edu	37	2	158167726	158167726	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014568.1	+1	provisional	p.H897N	1.000	150	0%	96	21.9%	1	0%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,superfamily_Ricin B-like lectins
CYTIP	9595	genome.wustl.edu	37	2	158272657	158272657	+	Splice_Site	SNP	T	T	C	rs113391601		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004288.4	-1	reviewed	e8-2	0.961	46	0%	59	30.5%	0	-	-	-	-	-
PKP4	8502	genome.wustl.edu	37	2	159481878	159481878	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003628.3	+1	reviewed	p.F364	0.104	46	0%	47	44.7%	30	33.3%	-	-	-	NULL
PKP4	8502	genome.wustl.edu	37	2	159499179	159499179	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003628.3	+1	reviewed	p.S626Y	1.000	342	0%	523	29.3%	24	66.6%	possibly_damaging(0.807)	deleterious(0)	deleterious(0.748)	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
WDSUB1	151525	genome.wustl.edu	37	2	160104948	160104948	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128212.1	-1	validated	p.G403E	0.995	188	0%	181	29.8%	7	42.8%	benign(0.007)	tolerated(0.74)	neutral(0.002)	HMMPfam_U-box,superfamily_RING/U-box
WDSUB1	151525	genome.wustl.edu	37	2	160112711	160112711	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128212.1	-1	validated	p.K376N	1.000	137	0%	220	38.2%	13	15.3%	possibly_damaging(0.845)	tolerated(0.42)	neutral(0.338)	HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2
BAZ2B	29994	genome.wustl.edu	37	2	160303361	160303361	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013450.2	-1	validated	p.R210*	1.000	337	0%	381	28.9%	1	100%	-	-	-	NULL
CD302	9936	genome.wustl.edu	37	2	160639880	160639880	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014880.4	-1	validated	p.C56	1.000	239	0%	300	33%	0	-	-	-	-	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
LY75	4065	genome.wustl.edu	37	2	160673451	160673451	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002349.2	-1	validated	p.Y1416H	1.000	239	0%	342	39.2%	2	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
LY75	4065	genome.wustl.edu	37	2	160692081	160692081	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002349.2	-1	validated	p.E1195K	0.999	103	0%	127	27.6%	2	0%	probably_damaging(0.975)	tolerated(0.2)	neutral(0.466)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
LY75	4065	genome.wustl.edu	37	2	160742952	160742952	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002349.2	-1	validated	p.N298H	0.951	280	0%	157	29.9%	1	0%	probably_damaging(0.96)	tolerated(0.05)	deleterious(0.748)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
PLA2R1	22925	genome.wustl.edu	37	2	160898585	160898585	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007366.3	-1	validated	p.T206	0.049	89	0%	63	38.1%	1	0%	-	-	-	HMMPfam_fn2,HMMSmart_SM00059,PatternScan_FN2_1,superfamily_Kringle-like
ITGB6	3694	genome.wustl.edu	37	2	161052820	161052820	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000888.3	-1	provisional	p.L85I	1.000	250	0%	307	28.7%	2	0%	possibly_damaging(0.799)	tolerated(0.26)	neutral(0.335)	HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_Integrin domains
RBMS1	5937	genome.wustl.edu	37	2	161132196	161132196	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016836.3	-1	reviewed	p.V391	0.660	101	0%	98	24.5%	20	45%	-	-	-	NULL
TANK	10010	genome.wustl.edu	37	2	162081157	162081157	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004180.2	+1	reviewed	p.K140N	1.000	53	0%	59	27.1%	16	50%	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	NULL
TANK	10010	genome.wustl.edu	37	2	162087884	162087884	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004180.2	+1	reviewed	p.K308T	1.000	131	0%	199	28.1%	30	33.3%	probably_damaging(0.998)	tolerated(0.08)	deleterious(0.774)	NULL
TBR1	10716	genome.wustl.edu	37	2	162273064	162273064	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006593.2	+1	reviewed	p.R48I	1.000	100	0%	113	35.4%	0	-	possibly_damaging(0.922)	deleterious(0.03)	deleterious(0.736)	NULL
SLC4A10	57282	genome.wustl.edu	37	2	162760636	162760636	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022058.3	+1	reviewed	p.S492Y	1.000	196	0%	261	33.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_HCO3_cotransp
SLC4A10	57282	genome.wustl.edu	37	2	162762267	162762267	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022058.3	+1	reviewed	p.F593L	1.000	347	0%	430	29.8%	0	-	benign(0.093)	deleterious(0)	neutral(0.452)	HMMPfam_HCO3_cotransp
DPP4	1803	genome.wustl.edu	37	2	162881402	162881402	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001935.3	-1	reviewed	p.S312Y	0.421	163	0%	172	32.6%	0	-	benign(0.104)	tolerated(0.22)	neutral(0.050)	HMMPfam_DPPIV_N,superfamily_Dipeptidyl peptidase IV/CD26 N-terminal domain
DPP4	1803	genome.wustl.edu	37	2	162903283	162903283	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000413651	-1	known	p.L106F	1.000	30	0%	30	43.3%	0	-	benign(0.359)	-	-	NULL
FAP	2191	genome.wustl.edu	37	2	163070503	163070503	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004460.2	-1	reviewed	p.S316L	0.966	169	0%	186	30.1%	27	0%	benign(0.028)	tolerated(0.07)	neutral(0.321)	HMMPfam_DPPIV_N,superfamily_SSF82171
FAP	2191	genome.wustl.edu	37	2	163080149	163080149	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004460.2	-1	reviewed	p.A128T	1.000	223	0%	164	26.2%	8	0%	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	HMMPfam_DPPIV_N,superfamily_SSF82171
KCNH7	90134	genome.wustl.edu	37	2	163228387	163228387	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033272.2	-1	reviewed	p.I1181	1.000	137	0%	126	33.3%	0	-	-	-	-	NULL
KCNH7	90134	genome.wustl.edu	37	2	163374315	163374315	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033272.2	-1	reviewed	p.A273T	1.000	199	0%	117	28.2%	0	-	possibly_damaging(0.694)	deleterious(0.01)	deleterious(0.655)	NULL
GRB14	2888	genome.wustl.edu	37	2	165365355	165365355	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004490.2	-1	reviewed	p.R275Q	1.000	187	0%	168	33.3%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
COBLL1	22837	genome.wustl.edu	37	2	165552101	165552101	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014900.3	-1	validated	p.D639Y	1.000	409	0%	361	29.9%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
COBLL1	22837	genome.wustl.edu	37	2	165557184	165557184	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014900.3	-1	validated	p.N475K	0.926	313	0%	245	33.9%	2	100%	possibly_damaging(0.647)	deleterious(0.02)	deleterious(0.610)	NULL
SLC38A11	151258	genome.wustl.edu	37	2	165809238	165809238	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173512.1	-1	provisional	p.F14L	1.000	136	0%	122	28.7%	0	-	benign(0)	tolerated(0.21)	neutral(0.044)	NULL
SCN3A	6328	genome.wustl.edu	37	2	165947050	165947050	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006922.3	-1	reviewed	p.R1871	1.000	191	0%	166	28.9%	0	-	-	-	-	NULL
SCN3A	6328	genome.wustl.edu	37	2	165987767	165987767	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006922.3	-1	reviewed	p.R851Q	1.000	101	0%	86	29.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_SSF81324
SCN2A	6326	genome.wustl.edu	37	2	166165764	166165764	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040143.1	+1	reviewed	p.P232L	1.000	267	0%	166	19.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans,superfamily_SSF81324
SCN2A	6326	genome.wustl.edu	37	2	166210789	166210789	+	Missense_Mutation	SNP	C	C	A	rs121917754		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040142.1	+1	reviewed	p.L1003I	1.000	156	0%	149	34.9%	0	-	possibly_damaging(0.856)	tolerated(0.4)	neutral(0.347)	HMMPfam_Na_trans_assoc,superfamily_Voltage-gated potassium channels
SCN2A	6326	genome.wustl.edu	37	2	166231200	166231200	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040142.1	+1	reviewed	p.V1326	0.998	301	0%	189	30.7%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN2A	6326	genome.wustl.edu	37	2	166245895	166245895	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040142.1	+1	reviewed	p.A1860V	1.000	222	0%	202	27.7%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CSRNP3	80034	genome.wustl.edu	37	2	166451723	166451723	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024969.3	+1	validated	p.P50S	1.000	177	0%	226	30.5%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
CSRNP3	80034	genome.wustl.edu	37	2	166514311	166514311	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024969.3	+1	validated	p.K63N	1.000	124	0%	143	34.3%	0	-	probably_damaging(0.995)	tolerated(0.11)	deleterious(0.729)	NULL
SCN1A	6323	genome.wustl.edu	37	2	166850897	166850897	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006920.4	-1	reviewed	p.F1526	0.998	163	0%	110	32.7%	0	-	-	-	-	superfamily_SSF81324
SCN1A	6323	genome.wustl.edu	37	2	166850906	166850906	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006920.4	-1	reviewed	p.V1523	1.000	152	0%	97	28.9%	0	-	-	-	-	superfamily_SSF81324
SCN1A	6323	genome.wustl.edu	37	2	166903433	166903433	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006920.4	-1	reviewed	p.F408L	1.000	247	0%	187	32.6%	0	-	possibly_damaging(0.882)	deleterious(0.03)	deleterious(0.709)	HMMPfam_Ion_trans,superfamily_SSF81324
SCN9A	6335	genome.wustl.edu	37	2	167089934	167089934	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002977.3	-1	reviewed	p.Y1269*	1.000	127	0%	130	27.7%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN9A	6335	genome.wustl.edu	37	2	167129234	167129234	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002977.3	-1	reviewed	p.F998C	0.018	266	0%	141	51.8%	0	-	benign(0.051)	tolerated(0.21)	neutral(0.047)	HMMPfam_Na_trans_assoc
SCN9A	6335	genome.wustl.edu	37	2	167137047	167137047	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002977.3	-1	reviewed	p.F710L	1.000	125	0%	116	30.2%	0	-	possibly_damaging(0.76)	deleterious(0.04)	deleterious(0.630)	superfamily_Voltage-gated potassium channels
SCN7A	6332	genome.wustl.edu	37	2	167262427	167262427	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002976.2	-1	validated	p.R1571I	1.000	126	0%	68	26.5%	0	-	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	NULL
XIRP2	129446	genome.wustl.edu	37	2	168099825	168099825	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152381.4	+1	validated	p.E641	0.771	95	1.1%	73	39.7%	0	-	-	-	-	NULL
XIRP2	129446	genome.wustl.edu	37	2	168100484	168100484	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152381.4	+1	validated	p.S861F	0.001	86	0%	81	27.2%	0	-	benign(0.146)	tolerated(0.24)	neutral(0.050)	NULL
XIRP2	129446	genome.wustl.edu	37	2	168105202	168105202	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152381.4	+1	validated	p.K2434Q	0.000	119	0%	71	29.6%	0	-	benign(0.071)	deleterious(0.03)	neutral(0.369)	NULL
XIRP2	129446	genome.wustl.edu	37	2	168105310	168105310	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152381.4	+1	validated	p.T2470A	0.000	129	0%	77	39%	0	-	benign(0.004)	tolerated(0.44)	neutral(0.013)	NULL
XIRP2	129446	genome.wustl.edu	37	2	168115363	168115363	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079810.2	+1	validated	p.K769N	0.956	69	1.4%	10	60%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
B3GALT1	8708	genome.wustl.edu	37	2	168725861	168725861	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020981.2	+1	reviewed	p.E104D	1.000	67	0%	113	31%	2	50%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Galactosyl_T
B3GALT1	8708	genome.wustl.edu	37	2	168726058	168726058	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020981.2	+1	reviewed	p.A170V	1.000	171	0%	267	30.7%	0	-	possibly_damaging(0.854)	tolerated(0.12)	deleterious(0.590)	HMMPfam_Galactosyl_T
B3GALT1	8708	genome.wustl.edu	37	2	168726254	168726254	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020981.2	+1	reviewed	p.F235L	1.000	159	0%	194	37.6%	0	-	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	HMMPfam_Galactosyl_T
STK39	27347	genome.wustl.edu	37	2	168821210	168821210	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013233.2	-1	reviewed	p.D509Y	1.000	345	0%	249	32.5%	20	15%	possibly_damaging(0.952)	deleterious(0.01)	deleterious(0.801)	NULL
G6PC2	57818	genome.wustl.edu	37	2	169764326	169764326	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021176.2	+1	reviewed	p.L269M	1.000	163	0%	218	34.4%	0	-	probably_damaging(0.996)	tolerated(0.09)	deleterious(0.758)	NULL
G6PC2	57818	genome.wustl.edu	37	2	169764492	169764492	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021176.2	+1	reviewed	p.S324Y	1.000	313	0%	365	32.9%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
ABCB11	8647	genome.wustl.edu	37	2	169826640	169826640	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003742.2	-1	reviewed	p.R575Q	1.000	276	0.4%	188	33.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
DHRS9	10170	genome.wustl.edu	37	2	169938231	169938231	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142270.1	+1	validated	p.R47I	0.034	158	0%	184	37%	0	-	possibly_damaging(0.609)	deleterious(0.02)	deleterious(0.594)	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains
DHRS9	10170	genome.wustl.edu	37	2	169952140	169952140	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142270.1	+1	validated	p.L275I	1.000	120	0%	114	28.9%	4	0%	benign(0.024)	tolerated(0.37)	neutral(0.020)	superfamily_NAD(P)-binding Rossmann-fold domains
LRP2	4036	genome.wustl.edu	37	2	170013915	170013915	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004525.2	-1	reviewed	p.F3995	0.844	367	0.5%	230	33.5%	0	-	-	-	-	HMMSmart_EGF
LRP2	4036	genome.wustl.edu	37	2	170019045	170019045	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004525.2	-1	reviewed	p.P3942S	0.974	193	0%	181	32.6%	0	-	benign(0.004)	tolerated(0.57)	neutral(0.006)	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich
LRP2	4036	genome.wustl.edu	37	2	170030452	170030452	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004525.2	-1	reviewed	p.S3664L	1.000	115	0%	156	40.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich
LRP2	4036	genome.wustl.edu	37	2	170062653	170062653	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004525.2	-1	reviewed	p.R2479I	1.000	188	0%	181	32.6%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
LRP2	4036	genome.wustl.edu	37	2	170062935	170062935	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004525.2	-1	reviewed	p.R2432I	1.000	160	0%	207	35.7%	0	-	benign(0.106)	deleterious(0)	neutral(0.453)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
LRP2	4036	genome.wustl.edu	37	2	170081939	170081939	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004525.2	-1	reviewed	p.D1807N	1.000	167	0%	146	30.8%	0	-	benign(0.084)	tolerated(1)	neutral(0.006)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
LRP2	4036	genome.wustl.edu	37	2	170090074	170090074	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004525.2	-1	reviewed	p.T1649P	0.973	76	0%	80	33.8%	0	-	possibly_damaging(0.885)	deleterious(0.01)	deleterious(0.752)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
LRP2	4036	genome.wustl.edu	37	2	170113706	170113706	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004525.2	-1	reviewed	p.S856N	0.869	127	0%	115	28.7%	1	100%	possibly_damaging(0.455)	tolerated(0.22)	neutral(0.191)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
PPIG	9360	genome.wustl.edu	37	2	170460756	170460756	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004792.2	+1	validated	p.R41C	1.000	276	0%	480	30.4%	16	43.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pro_isomerase,superfamily_Cyclophilin-like
METTL5	29081	genome.wustl.edu	37	2	170668960	170668960	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000410097	-1	known	p.L200I	0.356	231	0%	318	29.2%	2	50%	benign(0)	tolerated(1)	-	NULL
UBR3	130507	genome.wustl.edu	37	2	170785318	170785318	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172070.3	+1	validated	p.F836V	1.000	204	0%	271	35.4%	2	0%	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	NULL
UBR3	130507	genome.wustl.edu	37	2	170917894	170917894	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172070.3	+1	validated	p.L1654I	1.000	299	0%	328	38.7%	12	41.6%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
MYO3B	140469	genome.wustl.edu	37	2	171056672	171056672	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138995.3	+1	validated	p.E67*	1.000	151	0%	148	35.1%	0	-	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
MYO3B	140469	genome.wustl.edu	37	2	171243639	171243639	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138995.3	+1	validated	p.E466D	1.000	118	0%	102	29.4%	1	100%	benign(0.011)	tolerated(0.3)	neutral(0.029)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO3B	140469	genome.wustl.edu	37	2	171508168	171508168	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138995.3	+1	validated	p.R1255Q	1.000	58	0%	108	26.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GORASP2	26003	genome.wustl.edu	37	2	171813025	171813025	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015530.3	+1	reviewed	p.S260Y	1.000	182	0%	191	34%	136	40.4%	possibly_damaging(0.775)	deleterious(0.01)	deleterious(0.694)	HMMPfam_GRASP55_65
TLK1	9874	genome.wustl.edu	37	2	171862725	171862725	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012290.4	-1	validated	p.K612N	1.000	191	0%	217	26.3%	11	72.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
TLK1	9874	genome.wustl.edu	37	2	171911592	171911592	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012290.4	-1	validated	e7+1	1.000	86	0%	73	15.1%	0	-	-	-	-	-
TLK1	9874	genome.wustl.edu	37	2	171939299	171939299	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012290.4	-1	validated	p.E108*	1.000	178	0%	140	29.3%	9	33.3%	-	-	-	NULL
SLC25A12	8604	genome.wustl.edu	37	2	172749752	172749752	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003705.3	-1	reviewed	p.R10Q	1.000	158	0%	308	31.8%	0	-	probably_damaging(0.998)	tolerated(0.18)	deleterious(0.530)	NULL
RAPGEF4	11069	genome.wustl.edu	37	2	173891895	173891895	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007023.3	+1	validated	p.E822D	1.000	141	0.7%	108	30.6%	0	-	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF
ZAK	51776	genome.wustl.edu	37	2	174096922	174096922	+	Nonsense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016653.2	+1	reviewed	p.Y345*	0.998	311	0%	474	26.8%	0	-	-	-	-	HMMSmart_SM00454,superfamily_SAM/Pointed domain
CDCA7	83879	genome.wustl.edu	37	2	174224139	174224139	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031942.4	+1	reviewed	p.E102K	1.000	176	0%	218	33.5%	0	-	probably_damaging(0.978)	deleterious(0.01)	deleterious(0.826)	NULL
CDCA7	83879	genome.wustl.edu	37	2	174231117	174231117	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031942.4	+1	reviewed	p.R381L	1.000	137	0%	213	27.2%	8	25%	probably_damaging(0.991)	tolerated(0.1)	deleterious(0.730)	HMMPfam_zf-4CXXC_R1
SP3	6670	genome.wustl.edu	37	2	174783367	174783367	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003111.4	-1	reviewed	p.R596W	1.000	236	0%	254	23.6%	23	34.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
OLA1	29789	genome.wustl.edu	37	2	174940227	174940227	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000428402	-1	known	p.E253*	1.000	238	0%	159	26.4%	70	38.5%	-	-	-	NULL
SCRN3	79634	genome.wustl.edu	37	2	175263159	175263159	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024583.3	+1	validated	p.E50*	0.964	162	0%	199	32.2%	5	20%	-	-	-	NULL
GPR155	151556	genome.wustl.edu	37	2	175333657	175333657	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033045.2	-1	validated	p.V389I	1.000	85	0%	184	25.5%	3	66.6%	benign(0.001)	tolerated(0.64)	neutral(0.003)	NULL
GPR155	151556	genome.wustl.edu	37	2	175338026	175338026	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033045.2	-1	validated	p.S176Y	1.000	53	0%	63	30.2%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Mem_trans
LOC100133109	100133109	genome.wustl.edu	37	2	175584661	175584661	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001716442.2	-1	model	p.A106V	1.000	45	0%	69	20.3%	223	0%	-	-	-	NULL
CHRNA1	1134	genome.wustl.edu	37	2	175624104	175624104	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039523.2	-1	reviewed	e3-1	1.000	158	0%	231	31.2%	0	-	-	-	-	-
ATF2	1386	genome.wustl.edu	37	2	175983056	175983056	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001880.2	-1	reviewed	p.E81*	1.000	361	0%	211	31.3%	4	50%	-	-	-	NULL
HOXD13	3239	genome.wustl.edu	37	2	176958196	176958196	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000523.3	+1	reviewed	p.Y193C	1.000	31	0%	29	31%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
HOXD13	3239	genome.wustl.edu	37	2	176959294	176959294	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000523.3	+1	reviewed	p.E290*	1.000	228	0%	385	25.5%	0	-	-	-	-	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like
HOXD3	3232	genome.wustl.edu	37	2	177036440	177036440	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006898.4	+1	reviewed	p.R246H	1.000	82	0%	73	30.1%	3	0%	unknown(0)	deleterious(0)	-	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1
TTC30B	150737	genome.wustl.edu	37	2	178415764	178415764	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152517.2	-1	validated	p.K576	1.000	263	0%	334	35.6%	6	66.6%	-	-	-	NULL
TTC30A	92104	genome.wustl.edu	37	2	178482113	178482113	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152275.3	-1	validated	p.N439K	1.000	201	0%	297	33%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMSmart_TPR,superfamily_SSF48452
PDE11A	50940	genome.wustl.edu	37	2	178705099	178705099	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016953.3	-1	reviewed	p.S460N	1.000	181	0%	287	27.5%	0	-	benign(0.338)	tolerated(0.53)	neutral(0.114)	HMMPfam_GAF,HMMSmart_SM00065,superfamily_GAF domain-like
RBM45	129831	genome.wustl.edu	37	2	178977469	178977469	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152945.2	+1	provisional	p.K66E	1.000	33	0%	44	31.8%	5	60%	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
OSBPL6	114880	genome.wustl.edu	37	2	179259128	179259128	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145739.1	+1	reviewed	p.E892*	1.000	105	0%	117	19.7%	0	-	-	-	-	HMMPfam_Oxysterol_BP
TTN	7273	genome.wustl.edu	37	2	179396826	179396826	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.R32269Q	1.000	235	0%	338	34%	0	-	possibly_damaging(0.948)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179396966	179396966	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133378.4	-1	reviewed	p.S32224*	1.000	423	0.5%	584	32%	0	-	benign(0.002)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179412219	179412219	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.E28808D	1.000	118	0%	93	37.6%	0	-	probably_damaging(0.971)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179417092	179417092	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.R27609C	1.000	263	0%	220	29.5%	0	-	probably_damaging(0.999)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179418892	179418892	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133378.4	-1	reviewed	p.R27081*	1.000	259	0%	194	38.1%	0	-	probably_damaging(0.998)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179428258	179428258	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.L24964R	1.000	81	0%	111	26.1%	0	-	probably_damaging(0.998)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179428758	179428758	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133378.4	-1	reviewed	p.L24799S	1.000	106	0%	101	40.6%	0	-	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179428917	179428917	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133378.4	-1	reviewed	p.K24746R	0.990	131	0%	100	28%	0	-	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179431879	179431879	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.R23757Q	1.000	99	0%	100	28%	0	-	possibly_damaging(0.939)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179433514	179433514	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.P23212H	1.000	166	0%	164	39.6%	0	-	possibly_damaging(0.594)	-	-	HMMPfam_fn3
TTN	7273	genome.wustl.edu	37	2	179434701	179434701	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133378.4	-1	reviewed	p.D22818G	0.769	334	0%	284	37%	0	-	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179442498	179442498	+	Silent	SNP	C	C	T	rs187392843	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133378.4	-1	reviewed	p.R20317Q	0.041	256	0%	207	34.3%	2	0%	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179442499	179442499	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133378.4	-1	reviewed	p.R20317*	0.258	254	0%	205	29.8%	2	100%	benign(0.027)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179448343	179448343	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.A19286T	1.000	216	0%	157	24.2%	0	-	possibly_damaging(0.662)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179455098	179455098	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.I17882V	1.000	262	0%	200	36%	0	-	benign(0.014)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179457604	179457604	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.R17178W	1.000	155	0%	142	36.6%	0	-	possibly_damaging(0.944)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179459170	179459170	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.E16781*	1.000	226	0%	172	34.9%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179462779	179462779	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.D16470Y	1.000	408	0%	253	29.2%	0	-	benign(0.014)	-	-	HMMPfam_fn3,HMMSmart_SM00060
TTN	7273	genome.wustl.edu	37	2	179485033	179485033	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.F12837	0.952	146	0%	59	44.1%	0	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179489372	179489372	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.E12311*	1.000	129	0%	79	27.8%	0	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179494033	179494033	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.D12239N	1.000	255	0%	229	30.6%	0	-	probably_damaging(0.965)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179500778	179500778	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.N11272	0.592	141	0%	115	35.7%	0	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig
TTN	7273	genome.wustl.edu	37	2	179505269	179505269	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.K11006N	1.000	388	0%	190	26.3%	0	-	unknown(0)	deleterious(0)	-	NULL
TTN	7273	genome.wustl.edu	37	2	179516835	179516835	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.P10661S	0.988	340	0%	235	30.6%	0	-	unknown(0)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179516907	179516907	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	e157-1	1.000	316	0%	262	27.5%	0	-	-	-	-	-
TTN	7273	genome.wustl.edu	37	2	179571204	179571204	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.G8555	0.923	340	0%	331	32.3%	0	-	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179585851	179585851	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.I6388T	1.000	196	0%	136	33.1%	0	-	unknown(0)	-	-	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179587193	179587193	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.R6197*	0.996	63	0%	57	21.1%	0	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179591885	179591885	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.G5492E	1.000	113	0%	88	33%	0	-	unknown(0)	-	-	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179593071	179593071	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.L5250M	0.996	224	0%	148	25%	0	-	unknown(0)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179593644	179593644	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.R5130M	1.000	171	0%	124	33.9%	0	-	unknown(0)	-	-	HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179596658	179596658	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.V4404	0.627	118	0%	109	37.6%	0	-	-	-	-	HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179598194	179598194	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.D4032Y	1.000	255	0%	168	31.5%	0	-	unknown(0)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179598490	179598490	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.R3965I	0.996	239	0%	179	27.4%	0	-	unknown(0)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179600292	179600292	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000356127	-1	known	p.T3717A	1.000	117	0%	99	32.3%	0	-	unknown(0)	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set
TTN	7273	genome.wustl.edu	37	2	179605112	179605112	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000342175	-1	known	p.S4112Y	0.013	159	0%	152	30.3%	0	-	possibly_damaging(0.741)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179605649	179605649	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000342175	-1	known	p.S3933N	0.881	210	0%	177	35%	0	-	possibly_damaging(0.741)	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179613014	179613014	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133379.3	-1	reviewed	p.R4705	0.007	157	0.6%	62	30.6%	0	-	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179614947	179614947	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133379.3	-1	reviewed	p.A4060	0.000	272	0%	136	33.8%	0	-	-	-	-	NULL
TTN	7273	genome.wustl.edu	37	2	179616076	179616076	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133379.3	-1	reviewed	p.R3684I	0.713	248	0%	127	37.8%	0	-	possibly_damaging(0.681)	deleterious(0)	deleterious(0.688)	NULL
TTN	7273	genome.wustl.edu	37	2	179616685	179616685	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133379.3	-1	reviewed	p.K3481T	0.492	91	0%	45	37.8%	0	-	benign(0)	tolerated(0.58)	neutral(0.005)	NULL
TTN	7273	genome.wustl.edu	37	2	179638266	179638266	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133379.3	-1	reviewed	p.R2506Q	1.000	294	0%	217	33.6%	0	-	benign(0.287)	-	-	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726
TTN	7273	genome.wustl.edu	37	2	179641893	179641893	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133379.3	-1	reviewed	p.H1599	0.995	296	0%	254	30.7%	0	-	-	-	-	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726
TTN	7273	genome.wustl.edu	37	2	179655482	179655482	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133379.3	-1	reviewed	p.E585*	1.000	532	0%	498	33.9%	0	-	-	-	-	HMMPfam_Titin_Z
CCDC141	285025	genome.wustl.edu	37	2	179701729	179701729	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173648.2	-1	provisional	p.D831G	1.000	116	0%	153	34%	0	-	benign(0)	tolerated(1)	-	NULL
CCDC141	285025	genome.wustl.edu	37	2	179710433	179710433	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173648.2	-1	provisional	p.D557Y	0.808	281	0%	231	35.1%	0	-	probably_damaging(0.977)	deleterious(0.02)	deleterious(0.802)	NULL
SESTD1	91404	genome.wustl.edu	37	2	179989108	179989108	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178123.4	-1	validated	p.H384N	1.000	95	0%	126	34.1%	12	66.6%	probably_damaging(0.995)	tolerated(0.2)	deleterious(0.507)	NULL
LOC100131482	100131482	genome.wustl.edu	37	2	180679307	180679307	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001722616.1	+1	model	p.E110D	1.000	135	0%	198	30.3%	0	-	-	-	-	HMMPfam_DIM1,superfamily_Thioredoxin-like
ITGA4	3676	genome.wustl.edu	37	2	182376477	182376477	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000885.4	+1	reviewed	p.V633I	0.930	315	0%	181	33.7%	0	-	benign(0.014)	tolerated(0.37)	neutral(0.019)	HMMPfam_Integrin_alpha2,superfamily_Integrin domains
ITGA4	3676	genome.wustl.edu	37	2	182394329	182394329	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000885.4	+1	reviewed	p.S831Y	1.000	200	0%	230	32.6%	1	0%	probably_damaging(0.957)	tolerated(0.06)	deleterious(0.723)	HMMPfam_Integrin_alpha2,superfamily_Integrin domains
CERKL	375298	genome.wustl.edu	37	2	182468643	182468643	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001030311.2	-1	reviewed	p.K134N	0.990	163	0%	197	33%	1	0%	possibly_damaging(0.617)	deleterious(0.01)	deleterious(0.620)	NULL
NEUROD1	4760	genome.wustl.edu	37	2	182543324	182543324	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002500.2	-1	reviewed	p.K88N	1.000	351	0%	467	31.3%	0	-	possibly_damaging(0.794)	deleterious(0)	deleterious(0.742)	NULL
NEUROD1	4760	genome.wustl.edu	37	2	182543450	182543450	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002500.2	-1	reviewed	p.M46I	1.000	366	0%	529	32.7%	0	-	benign(0.002)	tolerated(0.6)	neutral(0.004)	NULL
PDE1A	5136	genome.wustl.edu	37	2	183053739	183053739	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005019.3	-1	validated	p.R408W	1.000	188	0%	175	30.3%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PDEase_I,superfamily_SSF109604
PDE1A	5136	genome.wustl.edu	37	2	183387040	183387040	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005019.3	-1	validated	p.E22*	1.000	245	0%	176	30.7%	0	-	-	-	-	NULL
DNAJC10	54431	genome.wustl.edu	37	2	183601048	183601048	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018981.1	+1	provisional	p.T308P	0.962	186	0%	196	37.2%	51	41.1%	benign(0.039)	tolerated(0.14)	neutral(0.252)	superfamily_Thioredoxin-like
LOC100287864	100287864	genome.wustl.edu	37	2	183723507	183723507	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342282.1	+1	model	p.Y3H	0.396	164	0%	192	29.7%	0	-	-	-	-	NULL
ZNF804A	91752	genome.wustl.edu	37	2	185800795	185800795	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194250.1	+1	provisional	p.V224	0.976	76	0%	91	42.9%	0	-	-	-	-	NULL
ZNF804A	91752	genome.wustl.edu	37	2	185803517	185803517	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194250.1	+1	provisional	p.L1132I	1.000	360	0.3%	551	31.6%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
FSIP2	401024	genome.wustl.edu	37	2	186672816	186672816	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000424728	+1	known	p.L6261F	1.000	46	0%	17	58.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FSIP2	401024	genome.wustl.edu	37	2	186672850	186672850	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000424728	+1	known	p.D6273Y	1.000	66	0%	25	24%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
FSIP2	401024	genome.wustl.edu	37	2	186697914	186697914	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000449112	+1	known	p.F113S	0.000	165	0%	90	34.4%	0	-	-	-	-	NULL
ITGAV	3685	genome.wustl.edu	37	2	187506230	187506230	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002210.3	+1	reviewed	p.T358	0.000	143	0%	218	28.4%	6	33.3%	-	-	-	HMMSmart_SM00191,superfamily_Integrin alpha N-terminal domain
DIRC1	116093	genome.wustl.edu	37	2	189599461	189599461	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052952.2	-1	validated	p.D63Y	0.001	294	0%	376	33%	0	-	unknown(0)	-	-	NULL
COL5A2	1290	genome.wustl.edu	37	2	189916190	189916190	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000393.3	-1	reviewed	p.A929	0.788	64	0%	73	41.1%	39	17.9%	-	-	-	HMMPfam_Collagen
COL5A2	1290	genome.wustl.edu	37	2	189968994	189968994	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000393.3	-1	reviewed	p.R111I	1.000	106	0%	57	24.6%	24	0%	possibly_damaging(0.847)	-	-	NULL
SLC40A1	30061	genome.wustl.edu	37	2	190428718	190428718	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014585.5	-1	reviewed	p.A332T	1.000	152	0%	187	36.4%	36	38.8%	possibly_damaging(0.6)	tolerated(0.08)	deleterious(0.507)	HMMPfam_FPN1,superfamily_MFS general substrate transporter
ANKAR	150709	genome.wustl.edu	37	2	190554573	190554573	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144708.3	+1	validated	p.D237Y	0.998	46	0%	41	43.9%	1	100%	benign(0)	deleterious(0)	neutral(0.445)	superfamily_Ankyrin repeat
ANKAR	150709	genome.wustl.edu	37	2	190554627	190554627	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144708.3	+1	validated	p.L255I	0.997	54	0%	70	17.1%	1	0%	possibly_damaging(0.739)	deleterious(0)	deleterious(0.715)	superfamily_Ankyrin repeat
ANKAR	150709	genome.wustl.edu	37	2	190593419	190593419	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144708.3	+1	validated	p.S951T	1.000	127	0%	184	39.7%	1	100%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMSmart_SM00185,superfamily_ARM repeat
PMS1	5378	genome.wustl.edu	37	2	190717473	190717473	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000534.4	+1	reviewed	p.S264	0.936	124	0%	108	32.4%	3	66.6%	-	-	-	HMMPfam_DNA_mis_repair,superfamily_Ribosomal_S5_D2-typ_fold
MSTN	2660	genome.wustl.edu	37	2	190922273	190922273	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005259.2	-1	reviewed	p.R280Q	1.000	138	0%	101	31.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_TGF_beta,superfamily_Cystine-knot cytokines
MSTN	2660	genome.wustl.edu	37	2	190925094	190925094	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005259.2	-1	reviewed	p.Q147	0.783	157	0%	72	34.7%	0	-	-	-	-	HMMPfam_TGFb_propeptide
MFSD6	54842	genome.wustl.edu	37	2	191301982	191301982	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017694.3	+1	validated	p.P409	0.092	158	0%	239	36.8%	10	30%	-	-	-	superfamily_MFS_gen_substrate_transporter
MFSD6	54842	genome.wustl.edu	37	2	191353526	191353526	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017694.3	+1	validated	p.V592M	1.000	365	0%	584	32.7%	12	50%	probably_damaging(0.953)	tolerated(0.25)	neutral(0.433)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
TMEM194B	100131211	genome.wustl.edu	37	2	191374029	191374029	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142645.1	-1	validated	p.D380	1.000	129	0%	135	34.8%	6	33.3%	-	-	-	HMMPfam_DUF2215
GLS	2744	genome.wustl.edu	37	2	191788671	191788671	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014905.3	+1	validated	p.R387*	1.000	87	0%	71	25.4%	6	16.6%	-	-	-	superfamily_beta-lactamase/transpeptidase-like,HMMPfam_Glutaminase
GLS	2744	genome.wustl.edu	37	2	191818309	191818309	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014905.3	+1	validated	p.L557I	1.000	316	0%	407	32.7%	1	100%	possibly_damaging(0.842)	tolerated(0.07)	deleterious(0.641)	superfamily_Ankyrin repeat
STAT1	6772	genome.wustl.edu	37	2	191854352	191854352	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007315.3	-1	reviewed	p.V362	0.987	102	0%	87	26.4%	29	20.6%	-	-	-	superfamily_p53-like transcription factors,HMMPfam_STAT_bind
STAT4	6775	genome.wustl.edu	37	2	191903933	191903933	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003151.2	-1	reviewed	p.D476N	1.000	181	0%	285	36.8%	0	-	benign(0.009)	tolerated(0.64)	neutral(0.004)	superfamily_P53_like_DNA_bnd,HMMPfam_STAT_bind
STAT4	6775	genome.wustl.edu	37	2	191931229	191931229	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003151.2	-1	reviewed	p.K186R	1.000	162	0%	194	29.4%	1	0%	benign(0.01)	tolerated(0.58)	neutral(0.005)	HMMPfam_STAT_alpha,superfamily_STAT
SLC39A10	57181	genome.wustl.edu	37	2	196573540	196573540	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127257.1	+1	validated	p.R516I	0.998	137	0%	156	28.8%	7	57.1%	possibly_damaging(0.935)	tolerated(0.11)	deleterious(0.652)	HMMPfam_Zip
SLC39A10	57181	genome.wustl.edu	37	2	196581650	196581650	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127257.1	+1	validated	p.K662N	0.993	164	0%	235	32.3%	7	71.4%	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	HMMPfam_Zip
DNAH7	56171	genome.wustl.edu	37	2	196640693	196640693	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018897.2	-1	validated	p.I3693	0.040	338	0%	547	32.7%	2	50%	-	-	-	HMMPfam_Dynein_heavy
DNAH7	56171	genome.wustl.edu	37	2	196726444	196726444	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018897.2	-1	validated	p.R2578I	1.000	86	0%	47	34%	0	-	probably_damaging(0.994)	tolerated(0.11)	deleterious(0.724)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH7	56171	genome.wustl.edu	37	2	196729429	196729429	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018897.2	-1	validated	p.R2317Q	1.000	284	0%	272	32.7%	0	-	possibly_damaging(0.95)	tolerated(0.24)	neutral(0.431)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH7	56171	genome.wustl.edu	37	2	196746611	196746611	+	Nonsense_Mutation	SNP	G	G	A	rs149212659		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018897.2	-1	validated	p.R1957*	0.998	285	0%	394	32.7%	1	100%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH7	56171	genome.wustl.edu	37	2	196765043	196765043	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018897.2	-1	validated	p.A1504V	1.000	131	0%	122	32.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
HECW2	57520	genome.wustl.edu	37	2	197106878	197106878	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020760.1	-1	provisional	p.E1194K	1.000	320	0%	471	27.2%	1	0%	probably_damaging(0.998)	tolerated(0.34)	deleterious(0.497)	NULL
C2orf66	401027	genome.wustl.edu	37	2	197674092	197674092	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_213608.1	-1	predicted	p.R7H	0.000	255	0%	378	38.1%	0	-	benign(0)	-	-	NULL
PGAP1	80055	genome.wustl.edu	37	2	197740525	197740525	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024989.3	-1	validated	p.F457L	1.000	90	0%	82	37.8%	1	100%	probably_damaging(0.99)	tolerated(0.37)	neutral(0.461)	NULL
COQ10B	80219	genome.wustl.edu	37	2	198338631	198338631	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025147.3	+1	provisional	p.E234*	1.000	109	0%	219	34.7%	15	40%	-	-	-	NULL
RFTN2	130132	genome.wustl.edu	37	2	198480650	198480650	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000414909	-1	known	e3-1	0.996	152	0%	276	37%	2	100%	-	-	-	-
RFTN2	130132	genome.wustl.edu	37	2	198540106	198540106	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144629.2	-1	validated	p.P26L	1.000	238	0%	228	32.9%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PLCL1	5334	genome.wustl.edu	37	2	198949661	198949661	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006226.3	+1	validated	p.V376I	1.000	133	0%	117	23.9%	0	-	benign(0.03)	tolerated(0.77)	neutral(0.003)	HMMPfam_PI-PLC-X,HMMSmart_PLCXc,superfamily_PLC-like_Pdiesterase_TIM-brl
PLCL1	5334	genome.wustl.edu	37	2	198968592	198968592	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006226.3	+1	validated	p.E915*	1.000	166	0%	113	26.5%	2	0%	-	-	-	NULL
SATB2	23314	genome.wustl.edu	37	2	200193611	200193611	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015265.3	-1	reviewed	p.R399H	1.000	135	0%	121	35.5%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CUT
SGOL2	151246	genome.wustl.edu	37	2	201434589	201434589	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152524.5	+1	validated	p.S226Y	0.083	102	0%	122	34.4%	1	100%	benign(0.076)	tolerated(0.28)	neutral(0.037)	NULL
SGOL2	151246	genome.wustl.edu	37	2	201436084	201436084	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152524.5	+1	validated	p.E339*	0.018	55	0%	47	31.9%	1	0%	-	-	-	NULL
AOX1	316	genome.wustl.edu	37	2	201470304	201470304	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001159.3	+1	reviewed	p.S287Y	1.000	139	0%	157	31.8%	0	-	possibly_damaging(0.607)	tolerated(0.12)	deleterious(0.471)	HMMPfam_FAD_binding_5,superfamily_FAD-binding domain
AOX1	316	genome.wustl.edu	37	2	201515701	201515701	+	Missense_Mutation	SNP	G	G	A	rs142541240	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001159.3	+1	reviewed	p.R951Q	0.993	92	0%	141	35.5%	0	-	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_Ald_Xan_dh_C2,superfamily_Molybdenum cofactor-binding domain
BZW1	9689	genome.wustl.edu	37	2	201677936	201677936	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000452790	+1	known	p.S31F	1.000	145	0%	232	25.4%	54	44.4%	probably_damaging(0.989)	-	-	NULL
ORC2	4999	genome.wustl.edu	37	2	201798685	201798685	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006190.3	-1	reviewed	p.E241*	1.000	121	0%	152	27.6%	3	0%	-	-	-	NULL
CFLAR	8837	genome.wustl.edu	37	2	202000992	202000992	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000395148	+1	known	p.L199I	0.000	20	0%	42	45.2%	0	-	benign(0.014)	deleterious(0)	neutral(0.445)	NULL
CASP8	841	genome.wustl.edu	37	2	202136317	202136317	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080125.1	+1	reviewed	p.I187	0.002	250	0%	402	32.1%	3	66.6%	-	-	-	HMMPfam_DED,HMMSmart_SM00031,superfamily_DEATH domain
ALS2CR12	130540	genome.wustl.edu	37	2	202163968	202163968	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139163.2	-1	validated	p.T312I	0.651	403	0%	559	31.7%	1	0%	possibly_damaging(0.922)	deleterious(0.02)	deleterious(0.754)	NULL
STRADB	55437	genome.wustl.edu	37	2	202323584	202323584	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018571.5	+1	reviewed	p.Y30*	0.629	110	0%	107	34.6%	6	16.6%	-	-	-	NULL
ALS2CR11	151254	genome.wustl.edu	37	2	202356833	202356833	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000439140	-1	known	p.R1411*	0.005	158	0%	164	37.8%	0	-	-	-	-	NULL
ALS2CR11	151254	genome.wustl.edu	37	2	202358053	202358053	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000439140	-1	known	p.R1004I	0.005	38	0%	35	34.3%	0	-	benign(0.379)	-	-	NULL
ALS2CR11	151254	genome.wustl.edu	37	2	202359008	202359008	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000439140	-1	known	p.L686I	0.997	86	0%	77	29.9%	0	-	probably_damaging(0.991)	-	-	NULL
ALS2	57679	genome.wustl.edu	37	2	202611451	202611451	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020919.3	-1	reviewed	p.V612	1.000	61	0%	100	41%	2	100%	-	-	-	superfamily_RCC1/BLIP-II
CDK15	65061	genome.wustl.edu	37	2	202688452	202688452	+	Splice_Site	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139158.1	+1	provisional	e5+2	1.000	288	0%	343	32.9%	0	-	-	-	-	-
FZD7	8324	genome.wustl.edu	37	2	202900642	202900642	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003507.1	+1	reviewed	p.F424	0.999	57	0%	67	32.8%	17	17.6%	-	-	-	HMMPfam_Frizzled
NBEAL1	65065	genome.wustl.edu	37	2	204067505	204067505	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114132.1	+1	validated	e49+1	1.000	147	0%	281	34.5%	0	-	-	-	-	-
CYP20A1	57404	genome.wustl.edu	37	2	204131377	204131377	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000433033	+1	known	p.S77*	1.000	106	0%	214	34.1%	3	66.6%	-	-	-	NULL
RAPH1	65059	genome.wustl.edu	37	2	204324748	204324748	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_213589.1	-1	validated	p.R325I	1.000	227	0%	246	39.8%	1	0%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_RA,HMMSmart_SM00314
PARD3B	117583	genome.wustl.edu	37	2	206166260	206166260	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152526.4	+1	validated	p.S760L	0.036	142	0%	240	32.5%	2	0%	benign(0.039)	tolerated(0.28)	neutral(0.034)	NULL
NRP2	8828	genome.wustl.edu	37	2	206617599	206617599	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201266.1	+1	reviewed	p.F648	0.990	130	0%	147	36.7%	18	11.1%	-	-	-	HMMPfam_MAM,HMMSmart_SM00137
NDUFS1	4719	genome.wustl.edu	37	2	207007477	207007477	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005006.5	-1	reviewed	p.D356Y	1.000	84	0%	162	32.1%	26	57.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Molybdopterin,superfamily_SSF53706
EEF1B2	1933	genome.wustl.edu	37	2	207027313	207027313	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037663.1	+1	reviewed	p.Q166H	1.000	119	0%	248	32.7%	1222	43.5%	benign(0.009)	deleterious(0)	neutral(0.445)	HMMPfam_EF1_GNE,superfamily_eEF-1beta-like
ZDBF2	57683	genome.wustl.edu	37	2	207170245	207170245	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020923.1	+1	validated	p.E331	0.013	72	0%	67	29.9%	0	-	-	-	-	NULL
ZDBF2	57683	genome.wustl.edu	37	2	207170441	207170441	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020923.1	+1	validated	p.D397Y	0.001	226	0%	192	26.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZDBF2	57683	genome.wustl.edu	37	2	207174223	207174223	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020923.1	+1	validated	p.S1657	0.000	112	1.8%	138	30.4%	0	-	-	-	-	NULL
ZDBF2	57683	genome.wustl.edu	37	2	207174442	207174442	+	Silent	SNP	G	G	A	rs140337696	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020923.1	+1	validated	p.S1730	0.000	105	0%	183	40.4%	0	-	-	-	-	NULL
ZDBF2	57683	genome.wustl.edu	37	2	207174545	207174545	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020923.1	+1	validated	p.E1765*	0.000	69	0%	107	30.8%	0	-	-	-	-	NULL
FASTKD2	22868	genome.wustl.edu	37	2	207631601	207631601	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136193.1	+1	reviewed	p.N62H	0.001	169	0%	185	38.4%	3	33.3%	possibly_damaging(0.716)	deleterious(0.02)	deleterious(0.642)	NULL
FASTKD2	22868	genome.wustl.edu	37	2	207639088	207639088	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136193.1	+1	reviewed	p.S465Y	1.000	237	0%	242	28.5%	14	57.1%	possibly_damaging(0.92)	tolerated(0.09)	deleterious(0.667)	HMMPfam_FAST_1
FASTKD2	22868	genome.wustl.edu	37	2	207652671	207652671	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136193.1	+1	reviewed	p.K535N	0.152	101	1%	117	32.5%	26	46.1%	benign(0.056)	deleterious(0.02)	neutral(0.387)	HMMPfam_FAST_2
CPO	130749	genome.wustl.edu	37	2	207820237	207820237	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173077.2	+1	validated	p.T72	0.977	223	0%	272	12.5%	0	-	-	-	-	HMMPfam_Peptidase_M14,HMMSmart_Zn_pept,superfamily_SSF53187
CREB1	1385	genome.wustl.edu	37	2	208442472	208442472	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000455757	+1	known	p.S138Y	0.138	51	0%	71	22.5%	0	-	benign(0.095)	-	-	NULL
PLEKHM3	389072	genome.wustl.edu	37	2	208842186	208842186	+	Silent	SNP	G	G	A	rs191382851	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080475.2	-1	validated	p.L245	0.005	321	0%	513	30%	0	-	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
PLEKHM3	389072	genome.wustl.edu	37	2	208865988	208865988	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080475.2	-1	validated	p.R126W	0.995	123	0%	139	28.8%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PTH2R	5746	genome.wustl.edu	37	2	209309470	209309470	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005048.2	+1	reviewed	p.K237N	1.000	604	0%	709	31.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_2,superfamily_SSF81321
PTH2R	5746	genome.wustl.edu	37	2	209358372	209358372	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005048.2	+1	reviewed	p.E547D	0.993	48	0%	116	24.1%	2	50%	benign(0.011)	tolerated(0.17)	neutral(0.059)	NULL
MAP2	4133	genome.wustl.edu	37	2	210557777	210557777	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002374.3	+1	reviewed	p.K295Q	1.000	55	0%	45	17.8%	1	0%	possibly_damaging(0.947)	deleterious(0)	deleterious(0.835)	NULL
MAP2	4133	genome.wustl.edu	37	2	210558211	210558211	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002374.3	+1	reviewed	p.E439	0.059	131	0%	160	30%	0	-	-	-	-	HMMPfam_MAP2_projctn
MAP2	4133	genome.wustl.edu	37	2	210558577	210558577	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002374.3	+1	reviewed	p.P561	0.365	98	0%	124	36.3%	0	-	-	-	-	HMMPfam_MAP2_projctn
MAP2	4133	genome.wustl.edu	37	2	210559073	210559073	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002374.3	+1	reviewed	p.L727M	1.000	110	0%	91	36.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_MAP2_projctn
MAP2	4133	genome.wustl.edu	37	2	210565059	210565059	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002374.3	+1	reviewed	p.V1527	0.994	248	0%	200	29.5%	6	66.6%	-	-	-	NULL
UNC80	285175	genome.wustl.edu	37	2	210752928	210752928	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032504.1	+1	validated	p.S1409Y	1.000	90	0%	71	28.2%	0	-	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
UNC80	285175	genome.wustl.edu	37	2	210787085	210787085	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032504.1	+1	validated	p.V1814	1.000	103	0%	117	36.8%	0	-	-	-	-	NULL
KANSL1L	151050	genome.wustl.edu	37	2	210894636	210894636	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152519.2	-1	validated	p.R721I	0.992	170	0%	200	44.5%	0	-	possibly_damaging(0.837)	deleterious(0)	deleterious(0.764)	NULL
ACADL	33	genome.wustl.edu	37	2	211070417	211070417	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001608.3	-1	reviewed	p.E236G	1.000	272	0%	385	34.5%	2	0%	benign(0.315)	deleterious(0)	deleterious(0.543)	superfamily_AcylCoA_dehyd_NM
CPS1	1373	genome.wustl.edu	37	2	211469901	211469901	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122633.1	+1	reviewed	p.R644*	1.000	213	0%	148	27.7%	0	-	-	-	-	HMMPfam_CPSase_L_D2,superfamily_Glutathione synthetase ATP-binding domain-like
CPS1	1373	genome.wustl.edu	37	2	211512710	211512710	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122633.1	+1	reviewed	p.R1095C	1.000	103	0%	99	36.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CPSase_L_D2,superfamily_PreATP-grasp domain,superfamily_Glutathione synthetase ATP-binding domain-like
CPS1	1373	genome.wustl.edu	37	2	211512711	211512711	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122633.1	+1	reviewed	p.R1095H	1.000	102	0%	99	32.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CPSase_L_D2,superfamily_PreATP-grasp domain,superfamily_Glutathione synthetase ATP-binding domain-like
ERBB4	2066	genome.wustl.edu	37	2	212248394	212248394	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005235.2	-1	reviewed	p.K1291N	1.000	187	0%	140	32.9%	1	0%	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	NULL
ERBB4	2066	genome.wustl.edu	37	2	212251811	212251811	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005235.2	-1	reviewed	p.A1083V	0.998	153	0%	224	28.6%	1	100%	benign(0.282)	tolerated(0.27)	neutral(0.120)	NULL
IKZF2	22807	genome.wustl.edu	37	2	213921719	213921719	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016260.2	-1	reviewed	p.E82K	1.000	270	0%	163	38%	0	-	benign(0.32)	tolerated(0.18)	neutral(0.156)	NULL
SPAG16	79582	genome.wustl.edu	37	2	214215350	214215350	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024532.3	+1	validated	p.R248I	1.000	147	0%	134	35.8%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_WD40 repeat-like
SPAG16	79582	genome.wustl.edu	37	2	215274902	215274902	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024532.3	+1	validated	p.H587N	1.000	128	0%	166	32.5%	0	-	possibly_damaging(0.642)	deleterious(0.04)	deleterious(0.574)	HMMSmart_SM00320,superfamily_WD40 repeat-like
SPAG16	79582	genome.wustl.edu	37	2	215275025	215275025	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024532.3	+1	validated	p.R628*	0.106	178	0%	195	34.4%	0	-	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
LOC100128203	100128203	genome.wustl.edu	37	2	215562751	215562751	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001717729.1	+1	model	p.R153I	1.000	64	0%	101	39.6%	0	-	-	-	-	NULL
ABCA12	26154	genome.wustl.edu	37	2	215798885	215798885	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173076.2	-1	reviewed	p.A2533T	1.000	249	0%	184	22.8%	1	0%	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	NULL
ABCA12	26154	genome.wustl.edu	37	2	215843590	215843590	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173076.2	-1	reviewed	p.D1639N	1.000	165	0%	204	34.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ATIC	471	genome.wustl.edu	37	2	216203539	216203539	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004044.6	+1	reviewed	p.R379Q	1.000	118	0%	197	29.9%	58	50%	probably_damaging(0.976)	deleterious(0)	deleterious(0.863)	HMMPfam_AICARFT_IMPCHas,HMMSmart_AICARFT_IMPCHas,superfamily_AICARFT_IMPCHas_formly
FN1	2335	genome.wustl.edu	37	2	216257726	216257726	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_212482.1	-1	reviewed	p.D1333Y	1.000	173	0%	202	29.7%	21	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
FN1	2335	genome.wustl.edu	37	2	216263993	216263993	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_212482.1	-1	reviewed	p.R1112I	1.000	185	0%	202	34.7%	49	0%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
MARCH4	57574	genome.wustl.edu	37	2	217124292	217124292	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020814.2	-1	validated	p.Q326K	1.000	154	0%	235	27.7%	1	0%	possibly_damaging(0.663)	tolerated(0.64)	neutral(0.237)	NULL
SMARCAL1	50485	genome.wustl.edu	37	2	217279793	217279793	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127207.1	+1	reviewed	p.I122	0.476	65	0%	105	34.3%	8	0%	-	-	-	NULL
SMARCAL1	50485	genome.wustl.edu	37	2	217293331	217293331	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127207.1	+1	reviewed	p.R387H	0.418	99	0%	182	33%	11	72.7%	benign(0.292)	deleterious(0.01)	deleterious(0.496)	HMMPfam_HARP
TNS1	7145	genome.wustl.edu	37	2	218682693	218682693	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022648.4	-1	reviewed	p.T1350	0.723	83	0%	87	24.1%	20	0%	-	-	-	NULL
TNS1	7145	genome.wustl.edu	37	2	218700919	218700919	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022648.4	-1	reviewed	p.E883A	1.000	45	0%	42	21.4%	1	0%	probably_damaging(0.981)	tolerated(0.05)	deleterious(0.771)	NULL
TNS1	7145	genome.wustl.edu	37	2	218712394	218712394	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022648.4	-1	reviewed	p.P824L	0.860	126	0%	176	30.7%	6	0%	benign(0)	deleterious(0.03)	neutral(0.364)	NULL
TMBIM1	64114	genome.wustl.edu	37	2	219144821	219144821	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022152.4	-1	validated	p.E77D	0.995	160	0%	263	31.6%	22	18.1%	benign(0.001)	tolerated(0.85)	neutral(0.001)	NULL
USP37	57695	genome.wustl.edu	37	2	219350460	219350460	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020935.2	-1	validated	p.E533*	1.000	127	0%	228	32.9%	0	-	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
USP37	57695	genome.wustl.edu	37	2	219362475	219362475	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020935.2	-1	validated	p.F421L	1.000	169	0%	297	34.7%	1	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_UCH,superfamily_Cysteine proteinases
PLCD4	84812	genome.wustl.edu	37	2	219486299	219486299	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032726.2	+1	provisional	p.E173*	0.976	198	0%	464	26.9%	0	-	-	-	-	superfamily_EF-hand
ZNF142	7701	genome.wustl.edu	37	2	219514107	219514107	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105537.1	-1	validated	p.R175Q	1.000	72	0%	142	35.9%	5	80%	benign(0.371)	deleterious(0.02)	deleterious(0.501)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF142	7701	genome.wustl.edu	37	2	219520966	219520966	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105537.1	-1	validated	p.A63T	1.000	88	0%	167	31.1%	3	66.6%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	NULL
STK36	27148	genome.wustl.edu	37	2	219559356	219559356	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015690.3	+1	validated	p.E837*	1.000	61	0%	125	36%	9	33.3%	-	-	-	superfamily_ARM repeat
PRKAG3	53632	genome.wustl.edu	37	2	219692041	219692041	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017431.2	-1	reviewed	p.L311I	1.000	164	0%	293	35.5%	0	-	benign(0)	tolerated(1)	-	HMMPfam_CBS,HMMSmart_SM00116,superfamily_CBS-domain
PRKAG3	53632	genome.wustl.edu	37	2	219692351	219692351	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017431.2	-1	reviewed	p.E274D	1.000	132	0%	197	40.6%	0	-	benign(0)	tolerated(0.1)	neutral(0.286)	HMMPfam_CBS
WNT6	7475	genome.wustl.edu	37	2	219736439	219736439	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006522.3	+1	reviewed	p.F178	1.000	17	0%	38	39.5%	34	38.2%	-	-	-	HMMPfam_wnt,HMMSmart_WNT1
WNT10A	80326	genome.wustl.edu	37	2	219754711	219754711	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025216.2	+1	reviewed	p.R128*	1.000	85	0%	144	38.9%	19	15.7%	-	-	-	HMMPfam_wnt,HMMSmart_SM00097
CCDC108	255101	genome.wustl.edu	37	2	219884308	219884308	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194302.2	-1	provisional	p.F1131L	1.000	32	0%	45	20%	0	-	possibly_damaging(0.849)	tolerated(0.15)	deleterious(0.567)	NULL
CCDC108	255101	genome.wustl.edu	37	2	219894799	219894799	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194302.2	-1	provisional	p.K431N	0.013	87	0%	123	29.3%	1	100%	benign(0.141)	tolerated(0.44)	neutral(0.025)	NULL
NHEJ1	79840	genome.wustl.edu	37	2	220022258	220022258	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024782.2	-1	reviewed	p.R109Q	1.000	112	0%	210	32.4%	6	0%	benign(0.253)	tolerated(0.19)	neutral(0.075)	HMMPfam_XLF
NHEJ1	79840	genome.wustl.edu	37	2	220022956	220022956	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024782.2	-1	reviewed	p.Q43H	0.893	90	0%	164	29.3%	7	57.1%	benign(0.001)	tolerated(0.36)	neutral(0.020)	HMMPfam_XLF
ANKZF1	55139	genome.wustl.edu	37	2	220096677	220096677	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000416565	+1	known	p.E41*	0.516	113	0%	213	31.9%	14	42.8%	-	-	-	NULL
GLB1L	79411	genome.wustl.edu	37	2	220104953	220104953	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024506.3	-1	provisional	p.P169Q	1.000	200	0%	391	34.3%	1	0%	probably_damaging(0.988)	deleterious(0.04)	deleterious(0.786)	HMMPfam_Glyco_hydro_35,superfamily_(Trans)glycosidases
GLB1L	79411	genome.wustl.edu	37	2	220107272	220107272	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024506.3	-1	provisional	p.R139*	0.391	189	0%	327	31.5%	2	0%	-	-	-	HMMPfam_Glyco_hydro_35,superfamily_(Trans)glycosidases
TUBA4A	7277	genome.wustl.edu	37	2	220115764	220115764	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006000.1	-1	reviewed	p.I219	1.000	188	0%	363	32.2%	141	68.7%	-	-	-	HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like
PTPRN	5798	genome.wustl.edu	37	2	220167424	220167424	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002846.2	-1	reviewed	p.S171	0.064	39	0%	49	24.5%	0	-	benign(0.146)	tolerated(0.17)	neutral(0.071)	NULL
DNPEP	23549	genome.wustl.edu	37	2	220250805	220250805	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012100.2	-1	reviewed	p.R159W	0.186	87	0%	132	35.6%	81	35.8%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	HMMPfam_Peptidase_M18,superfamily_SSF53187
DES	1674	genome.wustl.edu	37	2	220290427	220290427	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001927.3	+1	reviewed	p.K444T	1.000	64	0%	149	31.5%	34	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
ASIC4	55515	genome.wustl.edu	37	2	220402754	220402754	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018674.4	+1	reviewed	p.D663Y	1.000	80	0%	88	25%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SLC4A3	6508	genome.wustl.edu	37	2	220497002	220497002	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201574.2	+1	validated	p.E354K	1.000	60	0%	63	31.7%	4	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Phoshotransferase/anion transport protein
SLC4A3	6508	genome.wustl.edu	37	2	220498034	220498034	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201574.2	+1	validated	p.R466Q	1.000	95	0%	133	35.3%	9	55.5%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_Band_3_cyto,superfamily_Phoshotransferase/anion transport protein
SLC4A3	6508	genome.wustl.edu	37	2	220506403	220506403	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201574.2	+1	validated	p.D1245N	1.000	181	0%	204	31.4%	34	41.1%	possibly_damaging(0.564)	deleterious(0.01)	deleterious(0.598)	NULL
SCG2	7857	genome.wustl.edu	37	2	224463092	224463092	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003469.3	-1	reviewed	p.L303	0.549	155	0%	198	35.9%	2	0%	-	-	-	HMMPfam_Granin
SCG2	7857	genome.wustl.edu	37	2	224463191	224463191	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003469.3	-1	reviewed	p.E270D	1.000	368	0%	440	30.9%	1	0%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_Granin
SERPINE2	5270	genome.wustl.edu	37	2	224866564	224866564	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136530.1	-1	validated	p.I30	0.002	158	0%	231	26.4%	29	37.9%	-	-	-	NULL
FAM124B	79843	genome.wustl.edu	37	2	225266078	225266078	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122779.1	-1	validated	p.E136D	0.998	84	0%	83	36.1%	0	-	benign(0.229)	tolerated(0.2)	neutral(0.072)	NULL
CUL3	8452	genome.wustl.edu	37	2	225376286	225376286	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003590.3	-1	validated	p.K223T	1.000	193	0%	236	15.3%	12	0%	benign(0.014)	tolerated(0.28)	neutral(0.032)	HMMPfam_Cullin,superfamily_Cullin repeat
CUL3	8452	genome.wustl.edu	37	2	225378309	225378309	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003590.3	-1	validated	p.E196K	1.000	95	0%	86	30.2%	16	43.7%	benign(0)	tolerated(0.32)	neutral(0.024)	HMMPfam_Cullin,superfamily_Cullin repeat
CUL3	8452	genome.wustl.edu	37	2	225400354	225400354	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003590.3	-1	validated	p.R90Q	1.000	230	0%	337	33.2%	17	35.2%	possibly_damaging(0.834)	tolerated(0.12)	deleterious(0.579)	HMMPfam_Cullin,superfamily_Cullin repeat
DOCK10	55619	genome.wustl.edu	37	2	225659611	225659611	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000409802	-1	known	p.R439W	0.732	140	0%	199	34.7%	2	0%	-	-	-	NULL
DOCK10	55619	genome.wustl.edu	37	2	225661760	225661760	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014689.2	-1	validated	p.A1583V	1.000	113	0%	147	27.9%	1	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
DOCK10	55619	genome.wustl.edu	37	2	225721685	225721685	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014689.2	-1	validated	p.D567G	1.000	200	0%	213	32.9%	1	0%	probably_damaging(0.99)	tolerated(0.37)	neutral(0.461)	NULL
DOCK10	55619	genome.wustl.edu	37	2	225739465	225739465	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014689.2	-1	validated	p.S312L	0.914	235	0%	260	38.1%	0	-	benign(0.001)	tolerated(0.29)	neutral(0.029)	NULL
DOCK10	55619	genome.wustl.edu	37	2	225761044	225761044	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014689.2	-1	validated	p.E128	1.000	142	0%	216	27.8%	0	-	-	-	-	NULL
NYAP2	57624	genome.wustl.edu	37	2	226446755	226446755	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020864.1	+1	validated	p.D208N	1.000	60	0%	84	35.7%	0	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
NYAP2	57624	genome.wustl.edu	37	2	226447094	226447094	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020864.1	+1	validated	p.D321N	1.000	76	0%	49	26.5%	1	100%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
COL4A4	1286	genome.wustl.edu	37	2	227924157	227924157	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000092.4	-1	reviewed	p.G783*	1.000	168	0%	200	30.5%	0	-	-	-	-	NULL
COL4A4	1286	genome.wustl.edu	37	2	227924334	227924334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000092.4	-1	reviewed	p.R724C	0.483	42	0%	60	30%	0	-	probably_damaging(0.997)	tolerated(0.09)	deleterious(0.762)	NULL
COL4A4	1286	genome.wustl.edu	37	2	227983399	227983399	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000092.4	-1	reviewed	p.P151S	1.000	79	0%	99	32.3%	0	-	probably_damaging(0.996)	tolerated(0.11)	deleterious(0.733)	HMMPfam_Collagen
COL4A3	1285	genome.wustl.edu	37	2	228131140	228131140	+	Silent	SNP	C	C	T	rs73080086	byCluster;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000091.3	+1	reviewed	p.I441	0.000	188	0%	218	34.4%	0	-	-	-	-	NULL
COL4A3	1285	genome.wustl.edu	37	2	228135662	228135662	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000091.3	+1	reviewed	p.G584	0.016	45	0%	62	35.5%	0	-	-	-	-	HMMPfam_Collagen
COL4A3	1285	genome.wustl.edu	37	2	228145291	228145291	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000091.3	+1	reviewed	p.L787F	0.944	56	0%	84	34.5%	0	-	unknown(0)	deleterious(0.04)	-	HMMPfam_Collagen
COL4A3	1285	genome.wustl.edu	37	2	228145307	228145307	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000091.3	+1	reviewed	e30+1	1.000	51	0%	73	42.5%	0	-	-	-	-	-
COL4A3	1285	genome.wustl.edu	37	2	228147159	228147159	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000091.3	+1	reviewed	p.G856E	1.000	139	0%	213	33.8%	0	-	unknown(0)	deleterious(0)	-	NULL
COL4A3	1285	genome.wustl.edu	37	2	228159985	228159985	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000091.3	+1	reviewed	p.G1173D	1.000	159	0.6%	185	27.6%	0	-	unknown(0)	deleterious(0)	-	NULL
MFF	56947	genome.wustl.edu	37	2	228221781	228221781	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020194.4	+1	provisional	p.S326*	1.000	167	0%	214	29.9%	97	46.3%	-	-	-	HMMPfam_DUF800
C2orf83	56918	genome.wustl.edu	37	2	228497739	228497739	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020161.3	-1	validated	p.I21	0.001	127	0%	202	32.7%	0	-	-	-	-	HMMPfam_Folate_carrier
SPHKAP	80309	genome.wustl.edu	37	2	228846565	228846565	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142644.1	-1	validated	p.V1657	0.050	89	0%	84	40.5%	0	-	-	-	-	HMMPfam_AKAP_110
SPHKAP	80309	genome.wustl.edu	37	2	228881964	228881964	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142644.1	-1	validated	p.I1202	0.025	37	0%	47	38.3%	0	-	-	-	-	NULL
SPHKAP	80309	genome.wustl.edu	37	2	228883385	228883385	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142644.1	-1	validated	p.R729W	0.000	191	0%	338	35.8%	0	-	probably_damaging(0.983)	deleterious(0.03)	deleterious(0.793)	NULL
SPHKAP	80309	genome.wustl.edu	37	2	228884340	228884340	+	Silent	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142644.1	-1	validated	p.S410	0.993	160	0%	300	31%	0	-	-	-	-	NULL
SPHKAP	80309	genome.wustl.edu	37	2	228884532	228884532	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142644.1	-1	validated	p.F346L	0.008	219	0%	316	33.2%	0	-	benign(0)	tolerated(1)	-	NULL
DNER	92737	genome.wustl.edu	37	2	230271948	230271948	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139072.3	-1	validated	p.G575C	1.000	74	0%	80	31.2%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196
TRIP12	9320	genome.wustl.edu	37	2	230636299	230636299	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004238.1	-1	provisional	p.S1840L	1.000	121	0%	143	37.1%	89	38.2%	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT
TRIP12	9320	genome.wustl.edu	37	2	230675762	230675762	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004238.1	-1	provisional	e13-1	1.000	130	0%	199	30.7%	0	-	-	-	-	-
TRIP12	9320	genome.wustl.edu	37	2	230678649	230678649	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004238.1	-1	provisional	p.T593	0.027	97	1%	91	31.9%	11	54.5%	-	-	-	superfamily_ARM-type_fold
TRIP12	9320	genome.wustl.edu	37	2	230679861	230679861	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004238.1	-1	provisional	p.R514Q	1.000	94	0%	132	28%	6	33.3%	possibly_damaging(0.936)	deleterious(0.01)	deleterious(0.787)	superfamily_ARM-type_fold
SLC16A14	151473	genome.wustl.edu	37	2	230910937	230910937	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152527.4	-1	validated	p.S302L	0.971	74	0%	139	36%	0	-	benign(0.349)	tolerated(0.24)	neutral(0.148)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SP110	3431	genome.wustl.edu	37	2	231033881	231033881	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080424.2	-1	reviewed	p.F701V	0.000	122	0%	199	34.2%	0	-	possibly_damaging(0.734)	tolerated(0.05)	deleterious(0.614)	superfamily_Bromodomain
SP110	3431	genome.wustl.edu	37	2	231050857	231050857	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080424.2	-1	reviewed	p.A378S	0.000	210	0%	229	31.9%	9	11.1%	benign(0.15)	tolerated(0.14)	neutral(0.263)	NULL
SP110	3431	genome.wustl.edu	37	2	231067388	231067388	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080424.2	-1	reviewed	p.P319T	0.001	331	0%	549	33.7%	4	0%	benign(0.001)	tolerated(0.66)	neutral(0.003)	NULL
SP110	3431	genome.wustl.edu	37	2	231076244	231076244	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080424.2	-1	reviewed	p.Q231R	0.006	215	0%	295	30.5%	5	60%	possibly_damaging(0.515)	deleterious(0.02)	deleterious(0.556)	NULL
SP110	3431	genome.wustl.edu	37	2	231079815	231079815	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080424.2	-1	reviewed	p.R56	0.000	129	0%	148	34.5%	2	100%	-	-	-	HMMPfam_Sp100
SP140	11262	genome.wustl.edu	37	2	231106179	231106179	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007237.4	+1	validated	p.R156I	0.001	272	0%	244	33.2%	1	0%	benign(0.233)	tolerated(0.19)	neutral(0.073)	NULL
SP140	11262	genome.wustl.edu	37	2	231150507	231150507	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007237.4	+1	validated	p.K535N	0.006	236	0%	265	28.7%	0	-	possibly_damaging(0.923)	tolerated(0.06)	deleterious(0.695)	NULL
SP140	11262	genome.wustl.edu	37	2	231162137	231162137	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007237.4	+1	validated	p.R673I	0.000	253	0%	309	36.6%	0	-	-	-	-	NULL
SP140	11262	genome.wustl.edu	37	2	231177331	231177331	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007237.4	+1	validated	p.L846M	0.956	453	0%	596	32.6%	2	0%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain
SP100	6672	genome.wustl.edu	37	2	231309028	231309028	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080391.1	+1	validated	p.D136N	0.002	160	0%	207	32.4%	9	0%	possibly_damaging(0.88)	tolerated(0.21)	neutral(0.387)	HMMPfam_Sp100
SP100	6672	genome.wustl.edu	37	2	231313818	231313818	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080391.1	+1	validated	p.S180Y	0.000	190	0%	291	35.1%	4	0%	benign(0.045)	deleterious(0.01)	neutral(0.408)	NULL
SP100	6672	genome.wustl.edu	37	2	231326020	231326020	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080391.1	+1	validated	p.S288	0.988	153	0%	227	40.1%	7	0%	-	-	-	NULL
SP100	6672	genome.wustl.edu	37	2	231328805	231328805	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080391.1	+1	validated	p.E361*	0.004	131	0%	131	23.7%	12	0%	-	-	-	NULL
GPR55	9290	genome.wustl.edu	37	2	231775138	231775138	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005683.3	-1	validated	p.K180N	0.000	88	0%	174	24.7%	0	-	benign(0.08)	tolerated(0.17)	neutral(0.065)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
PSMD1	5707	genome.wustl.edu	37	2	231949808	231949808	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002807.2	+1	reviewed	p.R600*	1.000	291	0%	398	37.7%	46	6.5%	-	-	-	HMMPfam_PC_rep,superfamily_ARM repeat
ARMC9	80210	genome.wustl.edu	37	2	232156155	232156155	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025139.3	+1	validated	p.S572	0.730	58	0%	111	37.8%	14	42.8%	-	-	-	superfamily_ARM-type_fold
LOC729898	729898	genome.wustl.edu	37	2	232299133	232299133	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001134101.1	-1	model	p.A2V	0.462	119	0%	224	30.4%	0	-	-	-	-	NULL
LINC00471	151477	genome.wustl.edu	37	2	232378309	232378309	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_024079.1	-1	predicted	NULL	0.000	228	0%	490	32.2%	0	-	-	-	-	-
NMUR1	10316	genome.wustl.edu	37	2	232392962	232392962	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006056.4	-1	validated	p.R257Q	1.000	29	0%	63	50.8%	1	0%	possibly_damaging(0.626)	tolerated(0.3)	neutral(0.246)	HMMPfam_7tm_1,superfamily_SSF81321
DIS3L2	129563	genome.wustl.edu	37	2	232952224	232952224	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152383.4	+1	validated	p.E132*	1.000	70	0%	130	26.9%	3	0%	-	-	-	HMMPfam_OB_RNB
DIS3L2	129563	genome.wustl.edu	37	2	233199397	233199397	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000418143	+1	known	p.R10*	1.000	102	0%	108	25%	22	13.6%	-	-	-	NULL
ECEL1	9427	genome.wustl.edu	37	2	233347834	233347834	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004826.2	-1	validated	p.A521D	0.917	56	0%	74	48.6%	2	0%	possibly_damaging(0.446)	tolerated(0.13)	neutral(0.398)	"superfamily_Metalloproteases (""zincins"") catalytic domain"
GIGYF2	26058	genome.wustl.edu	37	2	233684608	233684608	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001103147.1	+1	reviewed	p.Q835	0.993	199	0%	406	36.9%	14	35.7%	-	-	-	NULL
NGEF	25791	genome.wustl.edu	37	2	233748746	233748746	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019850.2	-1	validated	p.E516K	0.950	136	0%	236	34.7%	0	-	benign(0)	tolerated(0.39)	neutral(0.016)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
NGEF	25791	genome.wustl.edu	37	2	233750039	233750039	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019850.2	-1	validated	p.R463H	1.000	234	0%	312	36.5%	2	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_DBL homology domain (DH-domain)
NGEF	25791	genome.wustl.edu	37	2	233791774	233791774	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019850.2	-1	validated	p.R169I	1.000	82	0%	131	36.6%	0	-	benign(0.189)	deleterious(0)	neutral(0.462)	NULL
ATG16L1	55054	genome.wustl.edu	37	2	234183424	234183424	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030803.6	+1	validated	p.F318	0.993	198	0%	300	38.3%	5	40%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
ATG16L1	55054	genome.wustl.edu	37	2	234191391	234191391	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030803.6	+1	validated	p.R399*	0.999	191	0%	385	28.8%	14	7.1%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
USP40	55230	genome.wustl.edu	37	2	234394437	234394437	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000454354	-1	known	p.S95L	0.892	31	0%	56	32.1%	12	25%	-	-	-	NULL
UGT1A8	54576	genome.wustl.edu	37	2	234527074	234527074	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019076.4	+1	reviewed	p.A241S	0.000	207	0%	229	31.4%	0	-	benign(0)	deleterious(0.05)	neutral(0.345)	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
UGT1A10	54575	genome.wustl.edu	37	2	234545421	234545421	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019075.2	+1	reviewed	p.D85Y	0.413	145	0%	183	25.7%	0	-	possibly_damaging(0.88)	deleterious(0)	deleterious(0.788)	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
UGT1A10	54575	genome.wustl.edu	37	2	234545585	234545585	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019075.2	+1	reviewed	p.E139D	0.000	418	0.2%	507	30.2%	0	-	benign(0.023)	tolerated(0.26)	neutral(0.035)	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
UGT1A1	54658	genome.wustl.edu	37	2	234669366	234669366	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000463.2	+1	reviewed	p.F145V	0.997	124	0%	230	33.9%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
TRPM8	79054	genome.wustl.edu	37	2	234846144	234846144	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024080.4	+1	validated	p.K113N	1.000	144	0%	309	35.3%	0	-	benign(0.035)	tolerated(0.35)	neutral(0.022)	NULL
TRPM8	79054	genome.wustl.edu	37	2	234869435	234869435	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024080.4	+1	validated	p.E460*	0.899	149	0%	227	34.8%	0	-	-	-	-	NULL
SH3BP4	23677	genome.wustl.edu	37	2	235949575	235949575	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014521.2	+1	reviewed	p.F54	0.001	116	0%	181	37%	9	55.5%	-	-	-	superfamily_SH3-domain
COL6A3	1293	genome.wustl.edu	37	2	238234268	238234268	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004369.3	-1	reviewed	p.G3143V	1.000	375	0%	416	30.8%	302	0%	unknown(0)	-	-	HMMPfam_Kunitz_BPTI,HMMSmart_SM00131,PatternScan_BPTI_KUNITZ_1,superfamily_BPTI-like
COL6A3	1293	genome.wustl.edu	37	2	238257024	238257024	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004369.3	-1	reviewed	p.E2312*	1.000	113	0%	87	37.9%	53	0%	-	-	-	NULL
COL6A3	1293	genome.wustl.edu	37	2	238273009	238273009	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004369.3	-1	reviewed	p.E1967D	0.913	234	0%	245	33.9%	82	0%	unknown(0)	-	-	HMMSmart_SM00327,superfamily_vWA-like
COL6A3	1293	genome.wustl.edu	37	2	238274454	238274454	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004369.3	-1	reviewed	p.E1909*	0.998	72	0%	55	41.8%	89	0%	-	-	-	HMMSmart_SM00327,superfamily_vWA-like
COL6A3	1293	genome.wustl.edu	37	2	238287544	238287544	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004369.3	-1	reviewed	p.P744	0.081	84	0%	103	36.9%	13	0%	-	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
COL6A3	1293	genome.wustl.edu	37	2	238296449	238296449	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004369.3	-1	reviewed	p.R363H	0.003	71	0%	64	28.1%	2	0%	unknown(0)	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
LRRFIP1	9208	genome.wustl.edu	37	2	238657028	238657028	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001137552.1	+1	validated	p.D91Y	1.000	228	0.4%	363	28.1%	7	14.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF2051
LRRFIP1	9208	genome.wustl.edu	37	2	238680762	238680762	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001137550.1	+1	validated	p.K516N	0.997	111	0%	243	26.3%	6	0%	probably_damaging(0.991)	deleterious(0.04)	deleterious(0.793)	HMMPfam_DUF2051
RBM44	375316	genome.wustl.edu	37	2	238726878	238726878	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080504.2	+1	validated	p.K440T	0.001	98	0%	57	45.6%	0	-	benign(0.068)	tolerated(0.15)	neutral(0.245)	NULL
ILKAP	80895	genome.wustl.edu	37	2	239079278	239079278	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030768.2	-1	reviewed	p.D360N	0.986	37	0%	43	34.9%	76	32.8%	benign(0.118)	tolerated(0.23)	neutral(0.051)	HMMSmart_PP2C_SIG,HMMSmart_PP2Cc,superfamily_PP2C-related,HMMPfam_PP2C
PRR21	643905	genome.wustl.edu	37	2	240981423	240981423	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080835.1	-1	provisional	p.S326*	0.010	586	0.2%	1063	24%	0	-	-	-	-	NULL
GPC1	2817	genome.wustl.edu	37	2	241402864	241402864	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002081.2	+1	reviewed	p.R273Q	0.891	66	0%	64	40.6%	49	40.8%	probably_damaging(0.956)	tolerated(0.35)	neutral(0.420)	HMMPfam_Glypican,PatternScan_GLYPICAN
KIF1A	547	genome.wustl.edu	37	2	241685554	241685554	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004321.4	-1	reviewed	p.S934L	0.989	41	0%	39	38.5%	3	66.6%	benign(0.013)	deleterious(0.01)	neutral(0.406)	NULL
SNED1	25992	genome.wustl.edu	37	2	241988171	241988171	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080437.1	+1	provisional	p.L498F	1.000	194	0%	198	19.2%	5	0%	probably_damaging(0.999)	tolerated(0.71)	deleterious(0.492)	HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_EGF/Laminin
PASK	23178	genome.wustl.edu	37	2	242065855	242065855	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015148.2	-1	validated	p.P825	0.000	82	0%	150	41.3%	10	60%	-	-	-	NULL
HDLBP	3069	genome.wustl.edu	37	2	242186272	242186272	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000373292	-1	known	p.R424*	0.009	176	0%	251	33.1%	336	37.2%	-	-	-	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
HDLBP	3069	genome.wustl.edu	37	2	242187718	242187718	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005336.3	-1	validated	p.R520C	1.000	207	0%	305	32.8%	227	37%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF54791
SEPT2	4735	genome.wustl.edu	37	2	242275279	242275279	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000457874	+1	known	p.E8*	0.000	27	0%	69	31.9%	0	-	unknown(0)	-	-	NULL
FARP2	9855	genome.wustl.edu	37	2	242430978	242430978	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014808.2	+1	validated	p.R891W	0.005	54	0%	72	48.6%	3	33.3%	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	NULL
BOK	666	genome.wustl.edu	37	2	242509658	242509658	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032515.3	+1	reviewed	p.F156L	1.000	54	0%	58	32.8%	19	0%	probably_damaging(0.996)	tolerated(0.16)	deleterious(0.521)	HMMPfam_Bcl-2,HMMSmart_BCL,superfamily_SSF56854
PDCD1	5133	genome.wustl.edu	37	2	242793420	242793420	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000343705	-1	known	p.L111F	0.015	42	0%	76	43.4%	0	-	-	-	-	NULL
CHL1	10752	genome.wustl.edu	37	3	361505	361505	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006614.2	+1	reviewed	p.F16L	0.035	192	0%	89	25.8%	0	-	benign(0.009)	tolerated(1)	neutral(0.001)	NULL
CHL1	10752	genome.wustl.edu	37	3	440023	440023	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006614.2	+1	reviewed	p.D1070N	1.000	143	0%	198	31.3%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
CHL1	10752	genome.wustl.edu	37	3	447386	447386	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006614.2	+1	reviewed	p.R1223W	0.846	124	0%	110	24.5%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CNTN6	27255	genome.wustl.edu	37	3	1189717	1189717	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014461.2	+1	reviewed	p.I9V	1.000	303	0%	188	26.1%	0	-	unknown(0)	tolerated(1)	-	NULL
CNTN6	27255	genome.wustl.edu	37	3	1424750	1424750	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014461.2	+1	reviewed	p.R764I	0.996	237	0%	226	29.2%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
CNTN6	27255	genome.wustl.edu	37	3	1425040	1425040	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014461.2	+1	reviewed	p.S822*	0.038	209	0%	238	27.3%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
CNTN4	152330	genome.wustl.edu	37	3	2777934	2777934	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175607.1	+1	reviewed	p.E31*	1.000	268	0%	302	28.5%	0	-	-	-	-	HMMPfam_I-set,superfamily_Immunoglobulin
CNTN4	152330	genome.wustl.edu	37	3	2942404	2942404	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175607.1	+1	reviewed	p.H326N	0.998	224	0%	231	30.7%	2	0%	benign(0.016)	deleterious(0.02)	neutral(0.384)	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
TRNT1	51095	genome.wustl.edu	37	3	3188246	3188246	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182916.2	+1	validated	p.V247	1.000	280	0%	419	32.5%	7	14.2%	-	-	-	superfamily_Poly A polymerase C-terminal region-like
CRBN	51185	genome.wustl.edu	37	3	3214475	3214475	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000424814	-1	known	p.E167*	1.000	326	0%	445	29.4%	12	41.6%	possibly_damaging(0.756)	tolerated(0.1)	deleterious(0.566)	HMMPfam_LON,HMMSmart_SM00464
LRRN1	57633	genome.wustl.edu	37	3	3887497	3887497	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020873.5	+1	validated	p.F391C	1.000	88	0%	136	26.5%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_LRRCT,superfamily_SSF52058
LRRN1	57633	genome.wustl.edu	37	3	3888263	3888263	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020873.5	+1	validated	p.A646	0.788	151	0%	136	30.9%	1	0%	-	-	-	NULL
SETMAR	6419	genome.wustl.edu	37	3	4355199	4355199	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006515.3	+1	validated	p.L258	0.957	112	0%	140	42.9%	8	50%	-	-	-	HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain
SETMAR	6419	genome.wustl.edu	37	3	4358564	4358564	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006515.3	+1	validated	p.I563	0.942	37	0%	42	31%	30	40%	-	-	-	HMMPfam_Transposase_1
ITPR1	3708	genome.wustl.edu	37	3	4558253	4558253	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099952.2	+1	reviewed	p.F26L	0.999	227	0%	424	35.1%	1	100%	benign(0.228)	deleterious(0.04)	neutral(0.371)	HMMPfam_Ins145_P3_rec
ITPR1	3708	genome.wustl.edu	37	3	4687139	4687139	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099952.2	+1	reviewed	p.D231	0.871	180	0%	301	33.2%	0	-	-	-	-	HMMSmart_SM00472
ITPR1	3708	genome.wustl.edu	37	3	4709154	4709154	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099952.2	+1	reviewed	p.R603W	1.000	107	0%	171	25.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RYDR_ITPR
ITPR1	3708	genome.wustl.edu	37	3	4714954	4714954	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099952.2	+1	reviewed	p.A780V	1.000	74	0%	86	23.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ITPR1	3708	genome.wustl.edu	37	3	4716020	4716020	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099952.2	+1	reviewed	p.T864M	1.000	339	0%	492	31.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ITPR1	3708	genome.wustl.edu	37	3	4752143	4752143	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099952.2	+1	reviewed	p.G1650	0.006	86	0%	119	30.3%	1	0%	-	-	-	NULL
ITPR1	3708	genome.wustl.edu	37	3	4776994	4776994	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099952.2	+1	reviewed	p.L1786I	1.000	178	0%	256	38.7%	1	0%	benign(0.287)	tolerated(0.41)	neutral(0.103)	NULL
BHLHE40	8553	genome.wustl.edu	37	3	5025373	5025373	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003670.2	+1	reviewed	p.D412A	1.000	103	0%	173	36.4%	99	50.5%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
ARL8B	55207	genome.wustl.edu	37	3	5164052	5164052	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000438743	+1	known	p.R25M	0.660	22	0%	20	25%	6	33.3%	possibly_damaging(0.649)	deleterious(0)	deleterious(0.672)	NULL
EDEM1	9695	genome.wustl.edu	37	3	5229986	5229986	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014674.2	+1	validated	p.D166N	0.999	12	0.000	9	0.444	7	28.5%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_Glyco_hydro_47,superfamily_Seven-hairpin glycosidases
GRM7	2917	genome.wustl.edu	37	3	7494490	7494490	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181874.2	+1	reviewed	p.F457L	1.000	78	1.3%	77	35.1%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_ANF_receptor,superfamily_SSF53822
GRM7	2917	genome.wustl.edu	37	3	7721828	7721828	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181874.2	+1	reviewed	p.I848	1.000	88	0%	114	30.7%	0	-	-	-	-	HMMPfam_7tm_3
OXTR	5021	genome.wustl.edu	37	3	8808956	8808956	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000916.3	-1	reviewed	p.K306	0.970	13	0.000	9	0.444	5	0%	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
RAD18	56852	genome.wustl.edu	37	3	8940615	8940615	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020165.3	-1	reviewed	p.E429*	0.188	233	0%	180	31.7%	6	16.6%	-	-	-	NULL
THUMPD3	25917	genome.wustl.edu	37	3	9406949	9406949	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114092.1	+1	validated	p.I66S	1.000	92	0%	191	43.5%	8	50%	possibly_damaging(0.926)	tolerated(0.06)	deleterious(0.697)	NULL
THUMPD3	25917	genome.wustl.edu	37	3	9412887	9412887	+	Nonsense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000441127	+1	known	p.L15*	0.000	97	0%	166	35.5%	9	55.5%	benign(0.296)	tolerated(0.11)	neutral(0.363)	NULL
THUMPD3	25917	genome.wustl.edu	37	3	9425955	9425955	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114092.1	+1	validated	p.R432H	1.000	83	0%	100	37%	26	42.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_UPF0020,superfamily_SSF53335
THUMPD3	25917	genome.wustl.edu	37	3	9426219	9426219	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000416603	+1	known	p.N228D	0.996	303	0%	543	35%	45	40%	-	-	-	HMMPfam_UPF0020
SETD5	55209	genome.wustl.edu	37	3	9476076	9476076	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080517.1	+1	provisional	p.G79E	1.000	145	0%	247	27.5%	9	33.3%	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	NULL
SETD5	55209	genome.wustl.edu	37	3	9477573	9477573	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080517.1	+1	provisional	p.K184Q	1.000	134	0%	298	38.3%	12	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SETD5	55209	genome.wustl.edu	37	3	9516777	9516777	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000399686	+1	known	p.D887N	0.950	110	0%	189	34.9%	34	38.2%	-	-	-	NULL
MTMR14	64419	genome.wustl.edu	37	3	9726297	9726297	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077525.2	+1	reviewed	p.I331	1.000	241	0%	398	35.2%	34	32.3%	-	-	-	PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II
BRPF1	7862	genome.wustl.edu	37	3	9780777	9780777	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003694.1	+1	reviewed	p.R232W	1.000	108	0%	299	35.5%	6	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_EPL1
BRPF1	7862	genome.wustl.edu	37	3	9787263	9787263	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003694.1	+1	reviewed	p.T1025	0.001	84	0%	107	29.9%	21	14.2%	-	-	-	NULL
RPUSD3	285367	genome.wustl.edu	37	3	9885417	9885417	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000424438	-1	known	p.E7D	0.000	6	0.000	6	0.667	0	-	unknown(0)	-	-	NULL
IL17RC	84818	genome.wustl.edu	37	3	9962199	9962199	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153461.2	+1	reviewed	p.E235K	0.986	87	0%	154	42.2%	7	28.5%	possibly_damaging(0.637)	tolerated(0.06)	deleterious(0.545)	NULL
PRRT3	285368	genome.wustl.edu	37	3	9991760	9991760	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207351.3	-1	validated	p.L14M	0.995	26	0%	30	40%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
TMEM111	55831	genome.wustl.edu	37	3	10011470	10011470	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018447.1	-1	provisional	p.R197Q	1.000	121	0%	169	33.7%	177	37.2%	benign(0.197)	tolerated(0.7)	neutral(0.020)	HMMPfam_DUF850
FANCD2	2177	genome.wustl.edu	37	3	10088317	10088317	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033084.3	+1	reviewed	p.K396N	1.000	219	0%	394	28.7%	6	33.3%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
FANCD2	2177	genome.wustl.edu	37	3	10116324	10116324	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000421731	+1	known	p.R442Q	0.978	180	0%	338	36.4%	16	50%	-	-	-	NULL
ATP2B2	491	genome.wustl.edu	37	3	10426972	10426972	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001331.2	-1	reviewed	p.A327V	1.000	54	0%	61	31.1%	0	-	benign(0.086)	tolerated(0.28)	neutral(0.038)	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transmembrane domain M
SLC6A1	6529	genome.wustl.edu	37	3	11067950	11067950	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003042.3	+1	validated	p.S328L	1.000	226	0%	249	34.5%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_SNF
HRH1	3269	genome.wustl.edu	37	3	11301250	11301250	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000861.3	+1	reviewed	p.R176Q	0.000	149	0%	233	36.9%	3	0%	benign(0.017)	tolerated(0.46)	neutral(0.013)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
HRH1	3269	genome.wustl.edu	37	3	11302049	11302049	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000861.3	+1	reviewed	p.K442	0.004	163	0%	325	36%	1	0%	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ATG7	10533	genome.wustl.edu	37	3	11468333	11468333	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006395.2	+1	validated	p.S671Y	1.000	175	0%	252	30.6%	27	37%	probably_damaging(0.979)	tolerated(0.05)	deleterious(0.767)	superfamily_Activating enzymes of the ubiquitin-like proteins
VGLL4	9686	genome.wustl.edu	37	3	11744489	11744489	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014667.2	-1	validated	p.V7A	1.000	143	0%	178	33.1%	19	52.6%	unknown(0)	-	-	NULL
PPARG	5468	genome.wustl.edu	37	3	12447443	12447443	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015869.4	+1	reviewed	p.D228Y	1.000	94	0%	115	27.8%	12	50%	possibly_damaging(0.74)	deleterious(0)	deleterious(0.716)	NULL
MKRN2	23609	genome.wustl.edu	37	3	12613589	12613589	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014160.3	+1	provisional	p.R120M	0.956	41	2.4%	80	31.2%	13	46.1%	benign(0)	tolerated(0.09)	neutral(0.296)	NULL
RAF1	5894	genome.wustl.edu	37	3	12626118	12626118	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002880.3	-1	reviewed	p.P614	0.983	161	0%	304	38.2%	133	30.8%	-	-	-	superfamily_Protein kinase-like (PK-like)
RAF1	5894	genome.wustl.edu	37	3	12626680	12626680	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002880.3	-1	reviewed	p.V537I	1.000	60	0%	113	27.4%	83	33.7%	probably_damaging(0.964)	deleterious(0.01)	deleterious(0.812)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
RAF1	5894	genome.wustl.edu	37	3	12660166	12660166	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002880.3	-1	reviewed	p.D19Y	1.000	138	0%	269	33.5%	24	37.5%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	NULL
NUP210	23225	genome.wustl.edu	37	3	13401904	13401904	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024923.2	-1	reviewed	p.E674K	0.997	118	0%	167	30.5%	17	58.8%	probably_damaging(0.998)	tolerated(0.27)	deleterious(0.508)	NULL
HDAC11	79885	genome.wustl.edu	37	3	13522787	13522787	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024827.3	+1	reviewed	p.R15H	0.865	81	0%	118	29.7%	6	33.3%	possibly_damaging(0.907)	deleterious(0.04)	deleterious(0.710)	superfamily_SSF52768
WNT7A	7476	genome.wustl.edu	37	3	13860670	13860670	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004625.3	-1	reviewed	p.S274L	1.000	137	0%	181	30.9%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_wnt,HMMSmart_SM00097
XPC	7508	genome.wustl.edu	37	3	14187483	14187483	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004628.4	-1	reviewed	p.K927N	0.062	186	0%	262	27.5%	34	44.1%	possibly_damaging(0.56)	deleterious(0.01)	deleterious(0.597)	NULL
SLC6A6	6533	genome.wustl.edu	37	3	14485268	14485268	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134367.1	+1	validated	p.E42D	1.000	191	0%	281	34.9%	6	50%	possibly_damaging(0.917)	tolerated(0.41)	neutral(0.383)	HMMPfam_SNF
GRIP2	80852	genome.wustl.edu	37	3	14547273	14547273	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080423.1	-1	provisional	p.A906V	0.008	73	0%	73	26%	0	-	-	-	-	NULL
C3orf20	84077	genome.wustl.edu	37	3	14746086	14746086	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032137.4	+1	validated	p.K374T	0.988	197	0%	312	31.7%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
FGD5	152273	genome.wustl.edu	37	3	14861544	14861544	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152536.3	+1	validated	p.E322	1.000	113	0%	90	32.2%	1	0%	-	-	-	NULL
FGD5	152273	genome.wustl.edu	37	3	14939591	14939591	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152536.3	+1	validated	p.R1019C	0.950	64	0%	79	36.7%	3	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
ZFYVE20	64145	genome.wustl.edu	37	3	15115891	15115891	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022340.2	-1	validated	p.A585T	0.001	128	0%	225	35.6%	6	16.6%	benign(0.01)	deleterious(0.02)	neutral(0.384)	NULL
ZFYVE20	64145	genome.wustl.edu	37	3	15137501	15137501	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022340.2	-1	validated	p.D43Y	0.997	302	0%	506	31%	7	100%	probably_damaging(0.954)	deleterious(0.03)	deleterious(0.762)	NULL
SH3BP5	9467	genome.wustl.edu	37	3	15298407	15298407	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004844.3	-1	validated	p.R368Q	1.000	66	0%	91	28.6%	24	16.6%	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
EAF1	85403	genome.wustl.edu	37	3	15477988	15477988	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033083.6	+1	validated	p.P222	0.000	31	0%	24	50%	6	50%	-	-	-	NULL
COLQ	8292	genome.wustl.edu	37	3	15512078	15512078	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005677.3	-1	reviewed	p.G228*	1.000	282	0%	392	37%	0	-	-	-	-	HMMPfam_Collagen
GALNTL2	117248	genome.wustl.edu	37	3	16237346	16237346	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_054110.4	+1	validated	p.L207I	1.000	43	0%	53	32.1%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glycos_transf_2,superfamily_SSF53448
GALNTL2	117248	genome.wustl.edu	37	3	16268865	16268865	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_054110.4	+1	validated	p.G593V	1.000	205	0.5%	190	23.2%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ricin_B_lectin,HMMSmart_RICIN,superfamily_RicinB_like
OXNAD1	92106	genome.wustl.edu	37	3	16336471	16336471	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138381.2	+1	validated	p.T133	0.000	181	0%	235	37.9%	13	30.7%	-	-	-	superfamily_Riboflavin_synthase_like_b-brl
RFTN1	23180	genome.wustl.edu	37	3	16535268	16535268	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015150.1	-1	validated	p.E37*	1.000	145	0%	200	38.5%	11	0%	-	-	-	NULL
DAZL	1618	genome.wustl.edu	37	3	16640063	16640063	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001351.2	-1	reviewed	p.E16*	1.000	476	0%	638	34.8%	0	-	-	-	-	superfamily_SSF54928
PLCL2	23228	genome.wustl.edu	37	3	17051946	17051946	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015184.5	+1	validated	p.E244*	1.000	69	0%	77	39%	1	0%	-	-	-	HMMPfam_efhand_like,superfamily_SSF47473
PLCL2	23228	genome.wustl.edu	37	3	17052240	17052240	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015184.5	+1	validated	p.R342W	1.000	199	0%	224	29.9%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PI-PLC-X,HMMSmart_PLCXc,superfamily_PLC-like_Pdiesterase_TIM-brl
TBC1D5	9779	genome.wustl.edu	37	3	17255739	17255739	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134381.1	-1	validated	p.R593H	1.000	175	0%	176	21.6%	1	0%	benign(0.073)	deleterious(0.03)	neutral(0.369)	NULL
TBC1D5	9779	genome.wustl.edu	37	3	17446397	17446397	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134381.1	-1	validated	p.E111	1.000	177	0%	80	26.3%	5	60%	-	-	-	HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p
KCNH8	131096	genome.wustl.edu	37	3	19295366	19295366	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144633.2	+1	reviewed	p.F99L	1.000	99	0%	71	38%	0	-	benign(0.135)	tolerated(0.41)	neutral(0.026)	HMMSmart_PAC,HMMPfam_PAS,superfamily_SSF55785
KCNH8	131096	genome.wustl.edu	37	3	19384082	19384082	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144633.2	+1	reviewed	p.K149T	1.000	115	0%	74	32.4%	1	0%	benign(0)	tolerated(0.51)	neutral(0.009)	NULL
KCNH8	131096	genome.wustl.edu	37	3	19575389	19575389	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144633.2	+1	reviewed	p.S1041Y	0.992	199	0%	229	37.6%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
EFHB	151651	genome.wustl.edu	37	3	19924193	19924193	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144715.3	-1	validated	p.R726Q	0.998	105	0%	178	39.3%	1	0%	probably_damaging(1)	tolerated(0.16)	deleterious(0.559)	superfamily_EF-hand
SGOL1	151648	genome.wustl.edu	37	3	20225463	20225463	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012410.2	-1	provisional	p.K19	1.000	183	0%	181	32.6%	1	0%	-	-	-	NULL
THRB	7068	genome.wustl.edu	37	3	24164384	24164384	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000461.4	-1	reviewed	p.F459	0.511	166	0%	219	37.4%	0	-	-	-	-	superfamily_Nuclear receptor ligand-binding domain
RARB	5915	genome.wustl.edu	37	3	25502752	25502752	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000965.3	+1	reviewed	p.R76*	1.000	221	0.5%	294	36.4%	1	0%	-	-	-	superfamily_SSF57716
TOP2B	7155	genome.wustl.edu	37	3	25648838	25648838	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001068.2	-1	reviewed	p.F1369L	1.000	203	0%	257	32.3%	120	42.5%	benign(0.001)	tolerated(1)	-	NULL
TOP2B	7155	genome.wustl.edu	37	3	25656717	25656717	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001068.2	-1	reviewed	p.A1185	1.000	78	0%	58	37.9%	75	40%	-	-	-	HMMPfam_DNA_topoisoIV,superfamily_Topo_IIA_cen
TOP2B	7155	genome.wustl.edu	37	3	25673951	25673951	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001068.2	-1	reviewed	p.K413Q	1.000	117	0%	60	36.7%	26	61.5%	possibly_damaging(0.918)	deleterious(0.03)	deleterious(0.733)	HMMSmart_TOP2c,HMMPfam_DNA_gyraseB,superfamily_Ribosomal_S5_D2-typ_fold
NGLY1	55768	genome.wustl.edu	37	3	25773875	25773875	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018297.3	-1	reviewed	p.E454*	1.000	264	0%	242	32.2%	10	0%	-	-	-	superfamily_Cysteine proteinases
NGLY1	55768	genome.wustl.edu	37	3	25792643	25792643	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018297.3	-1	reviewed	p.E202K	0.994	426	0%	460	33.3%	1	0%	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	NULL
NGLY1	55768	genome.wustl.edu	37	3	25820156	25820156	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018297.3	-1	reviewed	p.R52I	1.000	120	0%	202	31.2%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00580,HMMPfam_PUB
OXSM	54995	genome.wustl.edu	37	3	25835918	25835918	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017897.2	+1	reviewed	p.F438C	0.764	78	0%	122	39.3%	16	56.2%	benign(0)	tolerated(0.22)	neutral(0.042)	superfamily_Thiolase-like
NEK10	152110	genome.wustl.edu	37	3	27216186	27216186	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000396636	-1	known	p.E882K	0.880	121	0%	114	39.5%	0	-	benign(0.086)	tolerated(0.25)	neutral(0.043)	NULL
NEK10	152110	genome.wustl.edu	37	3	27346398	27346398	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199347.2	-1	validated	p.Y290H	0.997	120	0%	141	31.2%	0	-	possibly_damaging(0.783)	tolerated(0.37)	neutral(0.312)	superfamily_ARM repeat
SLC4A7	9497	genome.wustl.edu	37	3	27442266	27442266	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003615.3	-1	validated	p.L797I	1.000	327	0%	380	34.2%	0	-	possibly_damaging(0.9)	tolerated(0.14)	deleterious(0.606)	HMMPfam_HCO3_cotransp
AZI2	64343	genome.wustl.edu	37	3	28380026	28380026	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022461.3	-1	validated	p.V99	0.997	271	0%	224	37.9%	26	34.6%	-	-	-	NULL
OSBPL10	114884	genome.wustl.edu	37	3	31871562	31871562	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000429492	-1	known	p.S2N	1.000	81	0%	98	40.8%	2	50%	-	-	-	NULL
GPD1L	23171	genome.wustl.edu	37	3	32207363	32207363	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015141.3	+1	validated	p.E339D	0.997	294	0%	474	27.4%	3	33.3%	benign(0)	tolerated(0.94)	-	HMMPfam_NAD_Gly3P_dh_C,superfamily_6DGDH_C_like
CNOT10	25904	genome.wustl.edu	37	3	32750180	32750180	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015442.1	+1	provisional	p.E100*	1.000	210	0%	369	34.1%	5	20%	-	-	-	superfamily_TPR-like
CCR4	1233	genome.wustl.edu	37	3	32995848	32995848	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005508.4	+1	reviewed	p.R312C	0.996	93	0%	145	28.3%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Family A G protein-coupled receptor-like
CCR4	1233	genome.wustl.edu	37	3	32995889	32995889	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005508.4	+1	reviewed	p.L325	0.000	109	0%	145	45.5%	2	50%	-	-	-	NULL
CRTAP	10491	genome.wustl.edu	37	3	33166020	33166020	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006371.4	+1	reviewed	p.E248K	1.000	135	0%	196	37.8%	86	23.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SUSD5	26032	genome.wustl.edu	37	3	33194396	33194396	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015551.1	-1	validated	p.I576	0.007	115	0%	185	40.5%	0	-	-	-	-	NULL
SUSD5	26032	genome.wustl.edu	37	3	33194501	33194501	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015551.1	-1	validated	p.F541L	0.802	250	0%	452	34.7%	0	-	possibly_damaging(0.792)	tolerated(0.47)	neutral(0.308)	NULL
UBP1	7342	genome.wustl.edu	37	3	33444392	33444392	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128161.1	-1	validated	p.S311Y	1.000	116	0%	230	27%	27	40.7%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	NULL
CLASP2	23122	genome.wustl.edu	37	3	33580303	33580303	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015097.1	-1	validated	p.S1179F	0.999	137	0%	211	28.9%	6	50%	possibly_damaging(0.893)	tolerated(0.05)	deleterious(0.698)	superfamily_ARM repeat
ARPP21	10777	genome.wustl.edu	37	3	35730853	35730853	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016300.4	+1	validated	p.I154T	1.000	154	0%	51	35.3%	0	-	benign(0.022)	deleterious(0.02)	neutral(0.384)	HMMSmart_SM00393
ARPP21	10777	genome.wustl.edu	37	3	35758848	35758848	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016300.4	+1	validated	p.R332W	1.000	405	0%	269	26.4%	0	-	possibly_damaging(0.786)	deleterious(0)	deleterious(0.739)	NULL
TRANK1	9881	genome.wustl.edu	37	3	36873755	36873755	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014831.2	-1	provisional	p.R1846M	0.606	99	0%	144	34.7%	0	-	probably_damaging(0.961)	deleterious(0)	deleterious(0.849)	NULL
TRANK1	9881	genome.wustl.edu	37	3	36874624	36874624	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014831.2	-1	provisional	p.E1556D	1.000	184	0%	206	31.6%	2	0%	benign(0)	tolerated(0.39)	neutral(0.016)	NULL
TRANK1	9881	genome.wustl.edu	37	3	36893315	36893315	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014831.2	-1	provisional	p.E1000	1.000	95	0%	109	33.9%	1	0%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
TRANK1	9881	genome.wustl.edu	37	3	36896683	36896683	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014831.2	-1	provisional	p.Q916H	1.000	51	0%	70	27.1%	1	0%	benign(0.409)	tolerated(0.51)	neutral(0.141)	superfamily_P-loop containing nucleoside triphosphate hydrolases
TRANK1	9881	genome.wustl.edu	37	3	36915746	36915746	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000429976	-1	known	p.D266Y	1.000	170	0%	209	28.2%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
EPM2AIP1	9852	genome.wustl.edu	37	3	37033323	37033323	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014805.3	-1	reviewed	p.E416K	0.067	99	0%	117	39.3%	6	66.6%	benign(0.081)	tolerated(0.95)	neutral(0.006)	NULL
LRRFIP2	9209	genome.wustl.edu	37	3	37107798	37107798	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006309.2	-1	validated	p.E495*	1.000	289	0%	411	31.4%	0	-	-	-	-	HMMPfam_DUF2051
LRRFIP2	9209	genome.wustl.edu	37	3	37138143	37138143	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006309.2	-1	validated	p.E294D	1.000	171	0%	206	32%	14	35.7%	probably_damaging(0.975)	tolerated(0.19)	neutral(0.466)	HMMPfam_DUF2051
GOLGA4	2803	genome.wustl.edu	37	3	37367850	37367850	+	Missense_Mutation	SNP	A	A	C	rs57323471	byCluster;byFrequency;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002078.4	+1	reviewed	p.Q1491H	0.030	56	0%	95	33.7%	18	61.1%	probably_damaging(0.998)	tolerated(0.6)	deleterious(0.479)	NULL
ITGA9	3680	genome.wustl.edu	37	3	37547516	37547516	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002207.2	+1	reviewed	p.F256L	1.000	102	0%	156	29.5%	4	25%	probably_damaging(0.987)	tolerated(0.2)	deleterious(0.485)	HMMSmart_Int_alpha,superfamily_SSF69318
VILL	50853	genome.wustl.edu	37	3	38043301	38043301	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015873.3	+1	reviewed	p.E477K	1.000	115	0%	137	30.7%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00262,HMMPfam_Gelsolin,superfamily_Actin depolymerizing proteins
ACAA1	30	genome.wustl.edu	37	3	38164512	38164512	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_024024.1	-1	reviewed	NULL	0.002	54	0%	57	24.6%	90	43.3%	-	-	-	-
MYD88	4615	genome.wustl.edu	37	3	38181893	38181893	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002468.4	+1	reviewed	p.R173C	0.023	76	1.3%	135	34.1%	27	48.1%	benign(0.001)	tolerated(0.15)	neutral(0.241)	HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain
SLC22A13	9390	genome.wustl.edu	37	3	38317459	38317459	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004256.3	+1	reviewed	p.G370E	1.000	124	0%	162	43.2%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
ACVR2B	93	genome.wustl.edu	37	3	38524664	38524664	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001106.3	+1	reviewed	p.C460	1.000	205	0%	327	34.3%	10	70%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SCN5A	6331	genome.wustl.edu	37	3	38592489	38592489	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099404.1	-1	reviewed	p.D1792N	1.000	103	0%	150	40%	0	-	possibly_damaging(0.576)	deleterious(0)	deleterious(0.642)	superfamily_Voltage-gated potassium channels
SCN5A	6331	genome.wustl.edu	37	3	38595841	38595841	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099404.1	-1	reviewed	p.A1581D	1.000	198	0%	239	37.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN5A	6331	genome.wustl.edu	37	3	38639286	38639286	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099404.1	-1	reviewed	p.L732	1.000	162	0%	188	29.3%	0	-	-	-	-	superfamily_Voltage-gated potassium channels
SCN5A	6331	genome.wustl.edu	37	3	38663893	38663893	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099404.1	-1	reviewed	p.V160	1.000	139	0%	230	37.4%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN10A	6336	genome.wustl.edu	37	3	38739230	38739230	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006514.2	-1	validated	p.E1827D	0.867	132	0%	175	42.9%	0	-	benign(0.09)	tolerated(0.17)	neutral(0.066)	NULL
SCN10A	6336	genome.wustl.edu	37	3	38739317	38739317	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006514.2	-1	validated	p.I1798	1.000	115	0%	161	38.5%	0	-	-	-	-	NULL
SCN10A	6336	genome.wustl.edu	37	3	38739451	38739451	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006514.2	-1	validated	p.E1754*	0.008	123	0%	189	34.4%	0	-	-	-	-	NULL
SCN10A	6336	genome.wustl.edu	37	3	38739539	38739539	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006514.2	-1	validated	p.N1724	1.000	171	0%	286	27.6%	0	-	-	-	-	superfamily_SSF81324
SCN10A	6336	genome.wustl.edu	37	3	38755499	38755499	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006514.2	-1	validated	p.L1252I	0.995	110	0%	122	27%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Ion_trans,superfamily_SSF81324
SCN11A	11280	genome.wustl.edu	37	3	38904760	38904760	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014139.2	-1	validated	p.E1328*	1.000	413	0%	269	30.1%	0	-	-	-	-	superfamily_Voltage-gated potassium channels
SCN11A	11280	genome.wustl.edu	37	3	38961476	38961476	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014139.2	-1	validated	p.K303N	0.818	245	0%	243	28.4%	0	-	possibly_damaging(0.903)	tolerated(0.56)	neutral(0.364)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
TTC21A	199223	genome.wustl.edu	37	3	39162608	39162608	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105513.2	+1	validated	p.Q349K	1.000	265	0%	434	33.2%	3	0%	benign(0.138)	tolerated(1)	neutral(0.011)	HMMSmart_SM00028,superfamily_TPR-like
CSRNP1	64651	genome.wustl.edu	37	3	39185785	39185785	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033027.3	-1	reviewed	p.R208Q	0.971	48	0%	33	36.4%	14	42.8%	benign(0)	tolerated(0.08)	neutral(0.300)	NULL
CSRNP1	64651	genome.wustl.edu	37	3	39186512	39186512	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033027.3	-1	reviewed	p.E147D	1.000	66	0%	80	31.2%	13	7.6%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
XIRP1	165904	genome.wustl.edu	37	3	39228051	39228051	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194293.2	-1	provisional	p.Q962H	0.604	40	0%	41	31.7%	0	-	possibly_damaging(0.509)	deleterious(0)	deleterious(0.615)	NULL
XIRP1	165904	genome.wustl.edu	37	3	39229169	39229169	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194293.2	-1	provisional	p.D590N	0.603	26	0%	32	34.4%	0	-	possibly_damaging(0.882)	tolerated(0.11)	deleterious(0.616)	HMMPfam_Xin
XIRP1	165904	genome.wustl.edu	37	3	39229971	39229971	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194293.2	-1	provisional	p.I322	0.164	42	0%	64	32.8%	0	-	-	-	-	NULL
XIRP1	165904	genome.wustl.edu	37	3	39230665	39230665	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194293.2	-1	provisional	p.V91A	0.998	60	0%	53	37.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Xin
SLC25A38	54977	genome.wustl.edu	37	3	39431984	39431984	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017875.2	+1	reviewed	p.K88E	1.000	372	0%	620	34.5%	50	36%	possibly_damaging(0.759)	deleterious(0.01)	deleterious(0.687)	superfamily_Mitoch_carrier,HMMPfam_Mito_carr
SLC25A38	54977	genome.wustl.edu	37	3	39432962	39432962	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017875.2	+1	reviewed	p.I103L	0.927	112	0%	199	38.2%	48	37.5%	benign(0.002)	tolerated(0.97)	-	superfamily_Mitoch_carrier,HMMPfam_Mito_carr
MYRIP	25924	genome.wustl.edu	37	3	39942411	39942411	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015460.2	+1	validated	p.R35Q	0.996	89	0%	85	32.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_FYVE_PHD_ZnF
MYRIP	25924	genome.wustl.edu	37	3	40192569	40192569	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015460.2	+1	validated	p.F121L	1.000	88	0%	78	33.3%	1	0%	possibly_damaging(0.8)	deleterious(0.02)	deleterious(0.684)	superfamily_FYVE_PHD_ZnF
ENTPD3	956	genome.wustl.edu	37	3	40464345	40464345	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001248.2	+1	validated	p.S279Y	0.246	107	0%	148	40.5%	23	30.4%	benign(0.009)	tolerated(0.47)	neutral(0.011)	HMMPfam_GDA1_CD39
ENTPD3	956	genome.wustl.edu	37	3	40464870	40464870	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001248.2	+1	validated	p.F398S	0.994	147	0%	207	36.7%	26	61.5%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	HMMPfam_GDA1_CD39
ENTPD3	956	genome.wustl.edu	37	3	40465370	40465370	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001248.2	+1	validated	p.F423L	1.000	205	0%	282	27.3%	30	40%	probably_damaging(0.996)	tolerated(0.11)	deleterious(0.733)	HMMPfam_GDA1_CD39
ZNF619	285267	genome.wustl.edu	37	3	40524129	40524129	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145082.2	+1	validated	p.E117*	0.123	187	0%	264	33.7%	6	0%	-	-	-	NULL
ZNF620	253639	genome.wustl.edu	37	3	40557832	40557832	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175888.2	+1	validated	p.K249N	0.998	81	0%	125	31.2%	1	100%	possibly_damaging(0.805)	deleterious(0)	deleterious(0.748)	superfamily_C2H2 and C2HC zinc fingers
LOC729505	729505	genome.wustl.edu	37	3	40740759	40740759	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001130480.3	-1	model	p.R74I	0.551	16	0%	19	26.3%	0	-	-	-	-	HMMPfam_HMG14_17,HMMSmart_SM00527
CTNNB1	1499	genome.wustl.edu	37	3	41266097	41266097	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098209.1	+1	reviewed	p.D32N	1.000	101	0%	65	32.3%	157	31.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ENSG00000245715	0	genome.wustl.edu	37	3	41266344	41266344	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000502197	-1	known	NULL	0.000	60	0%	42	31%	0	-	-	-	-	-
CTNNB1	1499	genome.wustl.edu	37	3	41275192	41275192	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098209.1	+1	reviewed	p.R453Q	1.000	184	0%	176	33%	349	46.4%	benign(0.035)	tolerated(1)	neutral(0.002)	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
ULK4	54986	genome.wustl.edu	37	3	41957545	41957545	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017886.2	-1	validated	e7-1	0.987	72	0%	107	30.8%	0	-	-	-	-	-
NKTR	4820	genome.wustl.edu	37	3	42679785	42679785	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005385.3	+1	reviewed	p.E863D	0.973	58	0%	56	28.6%	5	60%	unknown(0)	deleterious(0)	-	NULL
KBTBD5	131377	genome.wustl.edu	37	3	42727289	42727289	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152393.2	+1	validated	p.A60V	1.000	34	0%	16	31.2%	0	-	probably_damaging(0.973)	tolerated(0.06)	deleterious(0.738)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
KBTBD5	131377	genome.wustl.edu	37	3	42727392	42727392	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152393.2	+1	validated	p.I94	1.000	53	0%	66	28.8%	0	-	-	-	-	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
KBTBD5	131377	genome.wustl.edu	37	3	42727695	42727695	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152393.2	+1	validated	p.F195	0.993	53	0%	58	34.5%	0	-	-	-	-	HMMPfam_BACK
LOC100287203	100287203	genome.wustl.edu	37	3	42728046	42728046	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342329.1	-1	model	p.E253K	0.394	81	0%	147	39.5%	0	-	-	-	-	NULL
CCDC13	152206	genome.wustl.edu	37	3	42788795	42788795	+	Missense_Mutation	SNP	C	C	T	rs182436192	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144719.3	-1	validated	p.R225Q	1.000	107	0%	112	40.2%	2	50%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	NULL
SNRK	54861	genome.wustl.edu	37	3	43344704	43344704	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100594.1	+1	validated	p.G3	0.993	198	0%	250	34.4%	3	0%	-	-	-	superfamily_Protein kinase-like (PK-like)
ANO10	55129	genome.wustl.edu	37	3	43591253	43591253	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018075.3	-1	validated	p.E586*	1.000	188	0%	172	32.6%	36	11.1%	-	-	-	HMMPfam_DUF590
ANO10	55129	genome.wustl.edu	37	3	43602832	43602832	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018075.3	-1	validated	p.P452	0.997	186	0%	387	32.6%	21	4.7%	-	-	-	HMMPfam_DUF590
C3orf77	375337	genome.wustl.edu	37	3	44283815	44283815	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145030.1	+1	validated	p.S90R	0.001	27	0%	48	29.2%	0	-	benign(0.278)	tolerated(0.78)	neutral(0.031)	NULL
C3orf77	375337	genome.wustl.edu	37	3	44285904	44285904	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145030.1	+1	validated	p.L636V	0.364	48	0%	90	44.4%	0	-	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	NULL
C3orf77	375337	genome.wustl.edu	37	3	44286527	44286527	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145030.1	+1	validated	p.K843	0.012	94	0%	108	12%	0	-	-	-	-	NULL
C3orf77	375337	genome.wustl.edu	37	3	44329300	44329300	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145030.1	+1	validated	p.A1217D	1.000	356	0.3%	399	30.1%	0	-	probably_damaging(0.962)	tolerated(0.22)	neutral(0.447)	NULL
C3orf77	375337	genome.wustl.edu	37	3	44373458	44373458	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145030.1	+1	validated	p.E1678	1.000	202	0%	282	32.6%	0	-	-	-	-	NULL
C3orf23	285343	genome.wustl.edu	37	3	44434423	44434423	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173826.3	+1	validated	p.R217C	1.000	126	0%	225	32.4%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C3orf23	285343	genome.wustl.edu	37	3	44441919	44441919	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173826.3	+1	validated	p.L320I	0.991	195	0%	227	32.2%	2	0%	benign(0.331)	tolerated(0.06)	neutral(0.426)	NULL
ZNF445	353274	genome.wustl.edu	37	3	44488432	44488432	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181489.5	-1	validated	p.L911F	0.086	97	0%	179	34.1%	2	0%	probably_damaging(0.961)	deleterious(0.04)	deleterious(0.753)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF852	285346	genome.wustl.edu	37	3	44541406	44541406	+	Missense_Mutation	SNP	C	C	T	rs186660651	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000436261	-1	known	p.R288Q	0.001	42	0%	66	37.9%	6	33.3%	possibly_damaging(0.696)	tolerated(1)	neutral(0.249)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF167	55888	genome.wustl.edu	37	3	44607046	44607046	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018651.2	+1	validated	p.E164A	0.012	97	0%	153	34.6%	0	-	possibly_damaging(0.778)	tolerated(0.11)	deleterious(0.562)	NULL
ZNF167	55888	genome.wustl.edu	37	3	44611810	44611810	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018651.2	+1	validated	p.R403I	1.000	57	0%	74	24.3%	1	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF660	285349	genome.wustl.edu	37	3	44636382	44636382	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173658.1	+1	provisional	p.L233I	0.672	116	0%	147	36.1%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF197	10168	genome.wustl.edu	37	3	44685051	44685051	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006991.3	+1	reviewed	p.R810I	0.930	89	0%	117	31.6%	5	40%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF197	10168	genome.wustl.edu	37	3	44685471	44685471	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006991.3	+1	reviewed	p.R950I	0.997	73	0%	98	24.5%	3	33.3%	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF502	91392	genome.wustl.edu	37	3	44763169	44763169	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134440.1	+1	validated	p.R287I	1.000	96	0%	127	28.3%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF502	91392	genome.wustl.edu	37	3	44763325	44763325	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134440.1	+1	validated	p.S339Y	0.001	94	1.1%	125	40%	1	0%	unknown(0)	tolerated(0.81)	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF501	115560	genome.wustl.edu	37	3	44776190	44776190	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145044.2	+1	validated	p.L93I	0.042	151	0%	197	38.1%	1	100%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF501	115560	genome.wustl.edu	37	3	44776458	44776458	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145044.2	+1	validated	p.R182I	0.846	204	0%	201	23.4%	2	100%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
KIF15	56992	genome.wustl.edu	37	3	44844408	44844408	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020242.2	+1	validated	p.E538*	0.998	131	0%	172	25%	1	100%	-	-	-	NULL
KIF15	56992	genome.wustl.edu	37	3	44846650	44846650	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020242.2	+1	validated	p.E607*	1.000	103	0%	149	32.2%	2	0%	-	-	-	NULL
TGM4	7047	genome.wustl.edu	37	3	44943291	44943291	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003241.3	+1	validated	p.R280I	0.895	147	0.7%	220	33.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Transglut_core,HMMSmart_TGc,PatternScan_TRANSGLUTAMINASES,superfamily_SSF54001
CCR9	10803	genome.wustl.edu	37	3	45942530	45942530	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031200.1	+1	reviewed	p.D84N	0.999	212	0%	355	38%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
FYCO1	79443	genome.wustl.edu	37	3	46010119	46010119	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024513.2	-1	validated	p.R236Q	0.995	97	0%	128	41.4%	2	0%	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	NULL
FYCO1	79443	genome.wustl.edu	37	3	46016748	46016748	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024513.2	-1	validated	p.M126I	1.000	113	0%	231	29%	0	-	possibly_damaging(0.891)	deleterious(0.03)	deleterious(0.715)	NULL
FYCO1	79443	genome.wustl.edu	37	3	46023064	46023064	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024513.2	-1	validated	p.Q54K	1.000	221	0%	258	29.5%	2	50%	possibly_damaging(0.94)	deleterious(0.05)	deleterious(0.730)	NULL
CCR2	729230	genome.wustl.edu	37	3	46399585	46399585	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001123041.2	+1	validated	p.V189	0.460	212	0%	300	34.7%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
CCR5	1234	genome.wustl.edu	37	3	46414416	46414416	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000579.3	+1	reviewed	p.P8Q	0.003	111	0%	159	34.6%	1	0%	possibly_damaging(0.869)	deleterious(0)	deleterious(0.782)	superfamily_Family A G protein-coupled receptor-like
CCR5	1234	genome.wustl.edu	37	3	46414896	46414896	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000579.3	+1	reviewed	p.R168I	0.073	75	0%	107	39.3%	2	0%	possibly_damaging(0.457)	deleterious(0)	deleterious(0.595)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
LTF	4057	genome.wustl.edu	37	3	46490365	46490365	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002343.2	-1	reviewed	p.A401T	0.002	29	0%	24	20.8%	1	0%	benign(0.043)	tolerated(0.59)	neutral(0.007)	HMMPfam_Transferrin,HMMSmart_TR_FER,superfamily_SSF53850
LTF	4057	genome.wustl.edu	37	3	46501154	46501154	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002343.2	-1	reviewed	p.A67S	0.987	160	0%	249	34.1%	0	-	probably_damaging(0.982)	tolerated(0.21)	deleterious(0.470)	HMMPfam_Transferrin,HMMSmart_TR_FER,superfamily_SSF53850
RTP3	83597	genome.wustl.edu	37	3	46539614	46539614	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031440.1	+1	provisional	p.P21L	0.313	113	0%	165	37%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
RTP3	83597	genome.wustl.edu	37	3	46541892	46541892	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031440.1	+1	provisional	p.L68M	0.002	78	0%	171	33.9%	0	-	benign(0.253)	tolerated(0.28)	neutral(0.057)	NULL
LRRC2	79442	genome.wustl.edu	37	3	46563074	46563074	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024512.3	-1	validated	p.R335Q	0.823	211	0.5%	291	37.1%	0	-	benign(0.003)	tolerated(0.36)	neutral(0.020)	superfamily_SSF52058
LRRC2	79442	genome.wustl.edu	37	3	46574379	46574379	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024512.3	-1	validated	p.E171*	1.000	162	0%	185	35.1%	0	-	-	-	-	HMMPfam_LRR_1,HMMSmart_LRR_TYP,superfamily_SSF52058
ALS2CL	259173	genome.wustl.edu	37	3	46722783	46722783	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_147129.2	-1	validated	p.W463*	1.000	53	0%	46	13%	1	0%	-	-	-	HMMPfam_MORN,HMMSmart_SM00698,superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
NBEAL2	23218	genome.wustl.edu	37	3	47032927	47032927	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015175.1	+1	validated	p.S225F	0.757	115	0%	137	32.1%	2	100%	possibly_damaging(0.91)	deleterious(0)	deleterious(0.807)	NULL
SETD2	29072	genome.wustl.edu	37	3	47125724	47125724	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014159.6	-1	reviewed	p.S1849L	1.000	121	0%	180	31.7%	14	42.8%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
SETD2	29072	genome.wustl.edu	37	3	47163575	47163575	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014159.6	-1	reviewed	p.E851*	0.998	58	0%	95	30.5%	3	33.3%	-	-	-	NULL
PTPN23	25930	genome.wustl.edu	37	3	47437678	47437678	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015466.2	+1	validated	p.E44*	1.000	247	0%	493	30%	15	53.3%	-	-	-	HMMPfam_BRO1
PTPN23	25930	genome.wustl.edu	37	3	47450422	47450422	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015466.2	+1	validated	p.R496Q	1.000	47	0%	111	35.1%	32	43.7%	probably_damaging(0.964)	deleterious(0.04)	deleterious(0.755)	NULL
PTPN23	25930	genome.wustl.edu	37	3	47450928	47450928	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015466.2	+1	validated	p.K607E	1.000	49	0%	66	25.8%	43	23.2%	probably_damaging(0.998)	tolerated(0.11)	deleterious(0.746)	NULL
SCAP	22937	genome.wustl.edu	37	3	47460159	47460159	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000383739	-1	known	p.R230C	0.733	19	0%	11	36.4%	49	40.8%	unknown(0)	-	-	NULL
SCAP	22937	genome.wustl.edu	37	3	47467094	47467094	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012235.2	-1	reviewed	p.I306	1.000	33	0%	59	39%	42	38%	-	-	-	superfamily_Multidrug efflux transporter AcrB transmembrane domain
SMARCC1	6599	genome.wustl.edu	37	3	47676796	47676796	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003074.3	-1	validated	p.T844A	0.030	340	0%	535	32.7%	58	58.6%	benign(0.003)	tolerated(0.91)	-	NULL
MAP4	4134	genome.wustl.edu	37	3	47951664	47951664	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030884.3	-1	reviewed	p.F23C	0.998	84	0%	127	34.6%	0	-	probably_damaging(0.964)	deleterious(0)	deleterious(0.851)	NULL
MAP4	4134	genome.wustl.edu	37	3	48040233	48040233	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002375.4	-1	reviewed	p.E40*	1.000	227	0%	349	33%	21	28.5%	-	-	-	NULL
ZNF589	51385	genome.wustl.edu	37	3	48309760	48309760	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016089.2	+1	validated	p.Q193	0.007	54	0%	132	30.3%	5	80%	-	-	-	NULL
MIR2115	100313840	genome.wustl.edu	37	3	48357859	48357859	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000516657	-1	known	NULL	0.439	76	0%	105	24.8%	0	-	-	-	-	-
PLXNB1	5364	genome.wustl.edu	37	3	48450833	48450833	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130082.1	-1	validated	p.F1997	0.987	81	0%	108	32.4%	98	27.5%	-	-	-	superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl
SHISA5	51246	genome.wustl.edu	37	3	48538614	48538614	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016479.3	-1	validated	p.K63N	0.411	131	0%	328	27.1%	45	35.5%	possibly_damaging(0.707)	deleterious(0.02)	deleterious(0.638)	NULL
COL7A1	1294	genome.wustl.edu	37	3	48605581	48605581	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000094.3	-1	reviewed	p.V2606A	0.651	111	0%	144	13.9%	6	0%	unknown(0)	tolerated(0.95)	-	HMMPfam_Collagen
COL7A1	1294	genome.wustl.edu	37	3	48612269	48612269	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000094.3	-1	reviewed	p.L2103	0.000	50	0%	70	37.1%	2	0%	-	-	-	NULL
COL7A1	1294	genome.wustl.edu	37	3	48619784	48619784	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000094.3	-1	reviewed	p.P1536H	0.999	123	0%	176	37.5%	1	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
SLC26A6	65010	genome.wustl.edu	37	3	48665454	48665454	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022911.2	-1	reviewed	p.G606	0.008	126	0%	176	27.8%	21	38%	-	-	-	HMMPfam_STAS,superfamily_Anti-sigma factor antagonist SpoIIaa
CELSR3	1951	genome.wustl.edu	37	3	48696665	48696665	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001407.2	-1	reviewed	p.R1135C	0.999	121	0%	226	32.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
IP6K2	51447	genome.wustl.edu	37	3	48725766	48725766	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005909.1	-1	reviewed	p.I407	1.000	91	0%	138	29.7%	160	38.7%	-	-	-	HMMPfam_IPK,superfamily_SAICAR synthase-like
IP6K2	51447	genome.wustl.edu	37	3	48725985	48725985	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005909.1	-1	reviewed	p.I334M	1.000	75	0%	116	38.8%	131	50.3%	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	HMMPfam_IPK,superfamily_SAICAR synthase-like
IP6K2	51447	genome.wustl.edu	37	3	48731673	48731673	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005910.1	-1	reviewed	p.G68V	1.000	73	0%	129	27.1%	28	7.1%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	superfamily_SSF56104
ENSG00000232483	0	genome.wustl.edu	37	3	48731869	48731869	+	RNA	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000421921	+1	novel	NULL	0.000	93	0%	123	40.7%	1	0%	-	-	-	-
PRKAR2A	5576	genome.wustl.edu	37	3	48828006	48828006	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004157.2	-1	reviewed	p.D136Y	1.000	97	0%	146	33.6%	4	50%	possibly_damaging(0.877)	deleterious(0.01)	deleterious(0.747)	superfamily_cNMP_binding
WDR6	11180	genome.wustl.edu	37	3	49050174	49050174	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018031.3	+1	reviewed	p.E433K	0.083	54	0%	80	32.5%	50	38%	benign(0.258)	tolerated(0.33)	neutral(0.051)	superfamily_WD40 repeat-like
QARS	5859	genome.wustl.edu	37	3	49135487	49135487	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005051.1	-1	reviewed	p.D739N	0.977	112	0%	248	33.5%	357	33%	benign(0.002)	tolerated(0.05)	neutral(0.345)	superfamily_Ribosomal_L25rel,HMMPfam_tRNA-synt_1c_C
QARS	5859	genome.wustl.edu	37	3	49137816	49137816	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005051.1	-1	reviewed	p.R351H	0.993	81	0%	118	44.9%	158	39.8%	benign(0.001)	tolerated(0.11)	neutral(0.272)	HMMPfam_tRNA-synt_1c,superfamily_SSF52374
USP19	10869	genome.wustl.edu	37	3	49152923	49152923	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006677.1	-1	provisional	p.V511	1.000	91	0%	149	36.9%	26	42.3%	-	-	-	HMMPfam_UCH,PatternScan_UCH_2_1,superfamily_Cysteine proteinases
KLHDC8B	200942	genome.wustl.edu	37	3	49212205	49212205	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173546.1	+1	provisional	p.A191D	1.000	46	0%	34	41.2%	23	17.3%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central
CCDC36	339834	genome.wustl.edu	37	3	49293755	49293755	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135197.1	+1	validated	p.P275	0.011	36	0%	101	24.8%	0	-	-	-	-	NULL
C3orf62	375341	genome.wustl.edu	37	3	49308863	49308863	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198562.2	-1	validated	p.R185Q	1.000	73	0%	107	34.6%	7	14.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
DAG1	1605	genome.wustl.edu	37	3	49569219	49569219	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004393.4	+1	reviewed	p.K425N	1.000	139	0%	268	35.1%	41	46.3%	possibly_damaging(0.918)	deleterious(0.03)	deleterious(0.733)	HMMPfam_DAG1
DAG1	1605	genome.wustl.edu	37	3	49570351	49570351	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004393.4	+1	reviewed	p.E803K	1.000	31	0%	52	36.5%	63	46%	possibly_damaging(0.666)	deleterious(0)	deleterious(0.680)	HMMPfam_DAG1
BSN	8927	genome.wustl.edu	37	3	49695207	49695207	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003458.3	+1	reviewed	p.I2740V	1.000	24	0%	41	26.8%	0	-	unknown(0)	-	-	NULL
BSN	8927	genome.wustl.edu	37	3	49698244	49698244	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003458.3	+1	reviewed	p.S2989Y	0.999	28	0%	30	26.7%	0	-	unknown(0)	-	-	NULL
MST1	4485	genome.wustl.edu	37	3	49725085	49725085	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020998.3	-1	reviewed	p.V87M	0.006	102	0%	127	31.5%	3	33.3%	benign(0.001)	tolerated(0.22)	neutral(0.042)	HMMPfam_PAN_1,HMMSmart_SM00473,superfamily_Hairpin loop containing domain-like
RNF123	63891	genome.wustl.edu	37	3	49728901	49728901	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022064.2	+1	reviewed	p.I42	1.000	99	0%	120	34.2%	10	50%	-	-	-	NULL
RNF123	63891	genome.wustl.edu	37	3	49739803	49739803	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022064.2	+1	reviewed	p.R532C	1.000	67	0%	82	26.8%	19	31.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RNF123	63891	genome.wustl.edu	37	3	49758725	49758725	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022064.2	+1	reviewed	p.S1311F	1.000	103	0%	148	28.4%	89	41.5%	benign(0.113)	deleterious(0)	neutral(0.454)	NULL
CDHR4	389118	genome.wustl.edu	37	3	49831367	49831367	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007540.2	-1	provisional	p.R451L	0.020	68	0%	110	29.1%	0	-	benign(0.32)	deleterious(0.03)	neutral(0.465)	HMMPfam_Cadherin,superfamily_Cadherin-like
UBA7	7318	genome.wustl.edu	37	3	49851200	49851200	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003335.2	-1	reviewed	p.S7	0.000	87	0%	195	29.7%	4	0%	-	-	-	NULL
TRAIP	10293	genome.wustl.edu	37	3	49877282	49877282	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005879.2	-1	reviewed	p.K269N	1.000	169	0%	341	30.5%	12	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
TRAIP	10293	genome.wustl.edu	37	3	49885612	49885612	+	Silent	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005879.2	-1	reviewed	p.T40	1.000	104	0%	214	35%	1	100%	-	-	-	HMMSmart_RING,HMMPfam_zf-C3HC4,superfamily_SSF57850
CAMKV	79012	genome.wustl.edu	37	3	49899480	49899480	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024046.3	-1	validated	p.K75N	1.000	155	0%	205	30.7%	0	-	benign(0.36)	deleterious(0.01)	deleterious(0.520)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
CAMKV	79012	genome.wustl.edu	37	3	49899786	49899786	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024046.3	-1	validated	p.K12N	1.000	100	0%	151	31.8%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	superfamily_Protein kinase-like (PK-like)
MON1A	84315	genome.wustl.edu	37	3	49949095	49949095	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032355.3	-1	validated	p.F256	0.751	36	0%	48	39.6%	9	22.2%	-	-	-	HMMPfam_Mon1
RBM6	10180	genome.wustl.edu	37	3	50114528	50114528	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005777.2	+1	validated	p.R1112*	0.997	89	0%	149	36.9%	88	34%	-	-	-	NULL
SEMA3F	6405	genome.wustl.edu	37	3	50211254	50211254	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004186.3	+1	validated	p.F47L	1.000	147	0%	260	36.2%	17	0%	benign(0.124)	tolerated(0.65)	neutral(0.013)	superfamily_Sema
SEMA3F	6405	genome.wustl.edu	37	3	50220864	50220864	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004186.3	+1	validated	p.R367Q	1.000	76	0%	103	41.7%	13	23%	possibly_damaging(0.719)	tolerated(0.34)	neutral(0.284)	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
HYAL3	8372	genome.wustl.edu	37	3	50332246	50332246	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003549.2	-1	reviewed	p.R263H	1.000	36	0%	91	42.9%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_hydro_56,superfamily_(Trans)glycosidases
NPRL2	10641	genome.wustl.edu	37	3	50387221	50387221	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006545.4	-1	validated	p.E72K	1.000	114	0%	178	34.8%	19	31.5%	unknown(0)	-	-	HMMPfam_NPR2
TMEM115	11070	genome.wustl.edu	37	3	50395882	50395882	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007024.4	-1	validated	p.L205I	1.000	46	0%	76	43.4%	53	32%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
DOCK3	1795	genome.wustl.edu	37	3	51264731	51264731	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004947.3	+1	validated	p.G465	1.000	165	0%	191	26.7%	0	-	-	-	-	NULL
DOCK3	1795	genome.wustl.edu	37	3	51308434	51308434	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004947.3	+1	validated	p.F848L	1.000	165	0%	264	31.8%	0	-	benign(0.221)	tolerated(0.82)	neutral(0.022)	NULL
ENSG00000250864	0	genome.wustl.edu	37	3	51431542	51431542	+	RNA	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000506856	-1	novel	NULL	0.962	38	0%	54	38.9%	112	44.6%	-	-	-	-
VPRBP	9730	genome.wustl.edu	37	3	51450751	51450751	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014703.2	-1	validated	p.D1288Y	1.000	188	0%	285	22.8%	12	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_WD40 repeat-like
VPRBP	9730	genome.wustl.edu	37	3	51456331	51456331	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014703.2	-1	validated	e13-1	1.000	51	0%	84	34.5%	0	-	-	-	-	-
RAD54L2	23132	genome.wustl.edu	37	3	51669792	51669792	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000432863	+1	known	p.G271*	1.000	145	0%	219	16.9%	7	57.1%	possibly_damaging(0.945)	deleterious(0.02)	deleterious(0.772)	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
RAD54L2	23132	genome.wustl.edu	37	3	51672266	51672266	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015106.2	+1	validated	p.R597C	1.000	138	0%	267	34.5%	3	100%	possibly_damaging(0.44)	deleterious(0.05)	deleterious(0.489)	HMMPfam_SNF2_N
RAD54L2	23132	genome.wustl.edu	37	3	51673996	51673996	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015106.2	+1	validated	p.D738N	1.000	89	0%	120	29.2%	3	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_P-loop containing nucleoside triphosphate hydrolases
IQCF3	401067	genome.wustl.edu	37	3	51864500	51864500	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001085479.1	+1	provisional	p.R50C	0.908	92	0%	128	33.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases
IQCF1	132141	genome.wustl.edu	37	3	51930906	51930906	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152397.2	-1	validated	p.K38T	0.012	279	0%	522	33%	0	-	benign(0.033)	tolerated(0.06)	neutral(0.324)	NULL
RRP9	9136	genome.wustl.edu	37	3	51970561	51970561	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004704.3	-1	provisional	p.E176	1.000	46	0%	45	33.3%	70	48.5%	-	-	-	superfamily_WD40 repeat-like
PARP3	10039	genome.wustl.edu	37	3	51978146	51978146	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003931.2	+1	reviewed	p.I82	0.259	74	0%	160	36.2%	1	0%	-	-	-	HMMPfam_WGR,HMMSmart_WGR
RPL29	6159	genome.wustl.edu	37	3	52029107	52029107	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000992.2	-1	reviewed	p.R18K	1.000	155	0%	347	32.6%	1542	42.6%	probably_damaging(0.995)	deleterious(0.04)	deleterious(0.806)	HMMPfam_Ribosomal_L29e
ALAS1	211	genome.wustl.edu	37	3	52248037	52248037	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000688.4	+1	validated	p.E588D	1.000	71	0%	140	33.6%	46	41.3%	benign(0)	tolerated(0.61)	neutral(0.004)	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
TLR9	54106	genome.wustl.edu	37	3	52256579	52256579	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017442.2	-1	reviewed	p.N585D	1.000	36	0%	49	22.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like
TLR9	54106	genome.wustl.edu	37	3	52257805	52257805	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017442.2	-1	reviewed	p.G176D	0.991	80	0%	219	30.6%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_L domain-like
DNAH1	25981	genome.wustl.edu	37	3	52395717	52395717	+	Missense_Mutation	SNP	G	G	A	rs140409219	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015512.4	+1	validated	p.D1639N	0.999	67	0%	86	39.5%	0	-	possibly_damaging(0.652)	tolerated(0.72)	neutral(0.231)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH1	25981	genome.wustl.edu	37	3	52425028	52425028	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015512.4	+1	validated	p.F3233L	1.000	63	0%	76	28.9%	2	0%	benign(0.002)	tolerated(0.92)	-	NULL
DNAH1	25981	genome.wustl.edu	37	3	52427469	52427469	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015512.4	+1	validated	p.R3532C	1.000	87	0%	163	31.3%	4	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
BAP1	8314	genome.wustl.edu	37	3	52437235	52437235	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004656.2	-1	reviewed	p.V603	0.000	142	0%	235	37%	53	35.8%	-	-	-	NULL
BAP1	8314	genome.wustl.edu	37	3	52443599	52443599	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004656.2	-1	reviewed	p.E31D	1.000	152	0%	325	34.8%	19	31.5%	benign(0.181)	deleterious(0)	neutral(0.461)	HMMPfam_Peptidase_C12,superfamily_Cysteine proteinases
SEMA3G	56920	genome.wustl.edu	37	3	52476312	52476312	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020163.1	-1	provisional	p.C116	0.961	38	0%	88	33%	0	-	unknown(0)	-	-	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
STAB1	23166	genome.wustl.edu	37	3	52543313	52543313	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015136.2	+1	reviewed	p.K775Q	1.000	75	0%	116	31.9%	0	-	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
STAB1	23166	genome.wustl.edu	37	3	52554134	52554134	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015136.2	+1	reviewed	p.E1804K	0.926	93	0%	112	33.9%	11	0%	benign(0.006)	tolerated(1)	-	HMMPfam_Fasciclin,HMMSmart_SM00554,superfamily_FAS1 domain
NT5DC2	64943	genome.wustl.edu	37	3	52563192	52563192	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134231.1	-1	validated	p.R131C	1.000	248	0%	477	31.7%	330	46.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
ITIH4	3700	genome.wustl.edu	37	3	52863281	52863281	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002218.4	-1	reviewed	p.I35	1.000	83	0%	184	36.4%	2	50%	-	-	-	HMMSmart_SM00609,HMMPfam_VIT
CACNA2D3	55799	genome.wustl.edu	37	3	54905603	54905603	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018398.2	+1	reviewed	p.S555N	1.000	329	0%	568	29.9%	1	100%	benign(0.01)	tolerated(1)	neutral(0.001)	NULL
ERC2	26059	genome.wustl.edu	37	3	56041334	56041334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015576.1	-1	validated	p.L646F	1.000	270	0%	144	36.1%	0	-	probably_damaging(0.987)	tolerated(0.16)	deleterious(0.496)	superfamily_Prefoldin,HMMPfam_Cast
ERC2	26059	genome.wustl.edu	37	3	56044586	56044586	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015576.1	-1	validated	p.R604Q	1.000	405	0%	336	31.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Prefoldin,HMMPfam_Cast
ERC2	26059	genome.wustl.edu	37	3	56330338	56330338	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015576.1	-1	validated	p.E261D	1.000	314	0%	406	31.5%	0	-	benign(0.014)	tolerated(0.21)	neutral(0.044)	HMMPfam_Cast
ERC2	26059	genome.wustl.edu	37	3	56468869	56468869	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015576.1	-1	validated	p.Y56C	1.000	189	0%	217	34.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CCDC66	285331	genome.wustl.edu	37	3	56649299	56649299	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001141947.1	+1	validated	p.G570	0.469	121	0%	261	33.7%	6	33.3%	-	-	-	NULL
CCDC66	285331	genome.wustl.edu	37	3	56651188	56651188	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001141947.1	+1	validated	p.S631*	0.033	79	0%	144	35.4%	5	40%	-	-	-	NULL
CCDC66	285331	genome.wustl.edu	37	3	56653485	56653485	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001141947.1	+1	validated	p.I855	0.995	105	0%	158	35.4%	11	27.2%	-	-	-	NULL
FAM208A	23272	genome.wustl.edu	37	3	56667651	56667651	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001112736.1	-1	validated	p.E1056D	1.000	205	0%	335	28.1%	8	25%	probably_damaging(0.971)	tolerated(0.45)	neutral(0.425)	NULL
IL17RD	54756	genome.wustl.edu	37	3	57132009	57132009	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017563.3	-1	validated	p.Y574*	0.982	103	0%	216	35.2%	6	50%	-	-	-	NULL
HESX1	8820	genome.wustl.edu	37	3	57232324	57232324	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003865.2	-1	reviewed	e4-1	1.000	140	0%	184	37%	0	-	-	-	-	-
APPL1	26060	genome.wustl.edu	37	3	57294659	57294659	+	Missense_Mutation	SNP	C	C	A	rs76731092		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012096.2	+1	reviewed	p.P567T	1.000	176	0%	258	26.4%	9	33.3%	possibly_damaging(0.823)	tolerated(0.06)	deleterious(0.634)	HMMPfam_PID,superfamily_SSF50729
DNAH12	201625	genome.wustl.edu	37	3	57321943	57321943	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000295941	-1	known	p.S2536Y	1.000	130	0%	186	39.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
DNAH12	201625	genome.wustl.edu	37	3	57330965	57330965	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178504.4	-1	validated	p.F2946L	1.000	198	0%	306	35%	0	-	possibly_damaging(0.946)	deleterious(0.02)	deleterious(0.773)	HMMPfam_Dynein_heavy
DNAH12	201625	genome.wustl.edu	37	3	57344881	57344881	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178504.4	-1	validated	p.R2719K	1.000	191	0%	205	34.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Dynein_heavy
DNAH12	201625	genome.wustl.edu	37	3	57386222	57386222	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178504.4	-1	validated	p.R2321*	0.999	177	0%	227	27.8%	0	-	-	-	-	NULL
DNAH12	201625	genome.wustl.edu	37	3	57399577	57399577	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178504.4	-1	validated	p.K1953N	1.000	155	0%	146	34.9%	0	-	possibly_damaging(0.896)	deleterious(0.01)	deleterious(0.759)	HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH12	201625	genome.wustl.edu	37	3	57419201	57419201	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178504.4	-1	validated	p.E1602*	1.000	211	0%	289	29.8%	0	-	-	-	-	HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH12	201625	genome.wustl.edu	37	3	57419433	57419433	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178504.4	-1	validated	p.V1570A	1.000	269	0%	366	25.7%	0	-	possibly_damaging(0.917)	deleterious(0)	deleterious(0.812)	HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH12	201625	genome.wustl.edu	37	3	57431074	57431074	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178504.4	-1	validated	p.G1395R	1.000	71	0%	121	34.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH12	201625	genome.wustl.edu	37	3	57487127	57487127	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178504.4	-1	validated	p.N419I	1.000	54	0%	72	31.9%	0	-	possibly_damaging(0.7)	tolerated(0.21)	neutral(0.295)	NULL
DNAH12	201625	genome.wustl.edu	37	3	57489844	57489844	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178504.4	-1	validated	p.E329*	1.000	143	0%	250	35.2%	0	-	-	-	-	NULL
DNAH12	201625	genome.wustl.edu	37	3	57494218	57494218	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178504.4	-1	validated	p.N198H	0.996	68	0%	112	43.8%	0	-	benign(0.077)	tolerated(0.19)	neutral(0.055)	NULL
DNAH12	201625	genome.wustl.edu	37	3	57496583	57496583	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178504.4	-1	validated	p.E135*	0.289	151	0%	253	30.4%	0	-	-	-	-	NULL
ARF4	378	genome.wustl.edu	37	3	57561286	57561286	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001660.3	-1	reviewed	p.R149C	1.000	125	0%	233	28.8%	526	41%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	HMMSmart_SM00175,HMMSmart_SM00178,HMMSmart_SM00177,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases
SLMAP	7871	genome.wustl.edu	37	3	57894833	57894833	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007159.2	+1	validated	p.R518Q	0.947	113	0%	164	32.3%	12	41.6%	possibly_damaging(0.674)	tolerated(0.28)	neutral(0.271)	NULL
FLNB	2317	genome.wustl.edu	37	3	58089715	58089715	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001457.3	+1	reviewed	p.D505Y	0.994	78	0%	136	27.2%	2	50%	possibly_damaging(0.583)	deleterious(0.01)	deleterious(0.606)	HMMSmart_IG_FLMN,superfamily_Ig_E-set,HMMPfam_Filamin
FLNB	2317	genome.wustl.edu	37	3	58094922	58094922	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001457.3	+1	reviewed	p.R691H	0.999	61	0%	114	33.3%	7	42.8%	possibly_damaging(0.838)	deleterious(0.02)	deleterious(0.703)	HMMSmart_IG_FLMN,superfamily_Ig_E-set,HMMPfam_Filamin
RPP14	11102	genome.wustl.edu	37	3	58296085	58296085	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098783.2	+1	validated	p.R10I	0.975	133	0%	278	34.5%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PXK	54899	genome.wustl.edu	37	3	58381411	58381411	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017771.3	+1	provisional	p.K249N	1.000	146	0%	207	31.9%	5	40%	probably_damaging(0.996)	tolerated(0.08)	deleterious(0.762)	superfamily_Protein kinase-like (PK-like)
PDHB	5162	genome.wustl.edu	37	3	58417332	58417332	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000925.3	-1	reviewed	p.V97	0.858	75	0%	136	23.5%	58	44.8%	-	-	-	HMMPfam_Transket_pyr,superfamily_Thiamin diphosphate-binding fold (THDP-binding)
C3orf67	200844	genome.wustl.edu	37	3	58849361	58849361	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198463.2	-1	validated	p.L381I	0.998	198	0%	260	30.4%	0	-	possibly_damaging(0.923)	tolerated(0.46)	neutral(0.385)	NULL
PTPRG	5793	genome.wustl.edu	37	3	62267274	62267274	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002841.3	+1	reviewed	p.E1268K	1.000	76	0%	47	34%	13	23%	possibly_damaging(0.559)	tolerated(0.13)	neutral(0.443)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II
CADPS	8618	genome.wustl.edu	37	3	62451054	62451054	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003716.3	-1	reviewed	p.F1208L	1.000	176	0%	169	29.6%	0	-	benign(0.038)	tolerated(0.14)	neutral(0.252)	NULL
CADPS	8618	genome.wustl.edu	37	3	62556561	62556561	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003716.3	-1	reviewed	p.F544V	1.000	227	0%	319	28.5%	0	-	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
SNTN	132203	genome.wustl.edu	37	3	63645494	63645494	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080537.1	+1	provisional	p.A80V	0.969	228	0%	181	30.4%	0	-	possibly_damaging(0.477)	deleterious(0)	deleterious(0.602)	superfamily_SSF47473
THOC7	80145	genome.wustl.edu	37	3	63825392	63825392	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000469153	-1	known	p.E20*	1.000	85	0%	124	33.1%	17	11.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_THOC7
ADAMTS9	56999	genome.wustl.edu	37	3	64599125	64599125	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182920.1	-1	reviewed	p.D1084Y	1.000	110	0%	110	20%	2	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
ADAMTS9	56999	genome.wustl.edu	37	3	64606904	64606904	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182920.1	-1	reviewed	p.R900Q	1.000	129	0%	90	35.6%	4	25%	probably_damaging(0.99)	tolerated(0.29)	deleterious(0.471)	HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
MAGI1	9223	genome.wustl.edu	37	3	65376999	65376999	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033057.1	-1	reviewed	p.S745Y	1.000	255	0%	254	35.8%	3	33.3%	possibly_damaging(0.942)	deleterious(0.04)	deleterious(0.736)	NULL
LRIG1	26018	genome.wustl.edu	37	3	66432017	66432017	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015541.2	-1	validated	p.D886N	0.014	148	0.7%	167	31.7%	12	33.3%	benign(0.177)	deleterious(0.04)	neutral(0.365)	NULL
LRIG1	26018	genome.wustl.edu	37	3	66436565	66436565	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015541.2	-1	validated	p.E543	1.000	219	0%	210	57.1%	9	44.4%	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
KBTBD8	84541	genome.wustl.edu	37	3	67054001	67054001	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032505.2	+1	validated	p.D178N	1.000	126	0%	150	30%	0	-	possibly_damaging(0.477)	tolerated(0.54)	neutral(0.165)	HMMPfam_BACK
SUCLG2	8801	genome.wustl.edu	37	3	67451240	67451240	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000460567	-1	known	p.R124C	0.133	87	0%	100	20%	18	22.2%	-	-	-	HMMPfam_Ligase_CoA,superfamily_Succinyl-CoA synthetase domains
FAM19A1	407738	genome.wustl.edu	37	3	68466534	68466534	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_213609.2	+1	reviewed	p.A75T	1.000	162	0%	170	30.6%	0	-	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
C3orf64	285203	genome.wustl.edu	37	3	69027534	69027534	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173654.1	-1	provisional	p.V379I	0.009	155	0%	242	33.1%	8	12.5%	benign(0.001)	tolerated(0.29)	neutral(0.029)	NULL
FRMD4B	23150	genome.wustl.edu	37	3	69230575	69230575	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015123.1	-1	validated	p.S776P	1.000	130	0%	221	33%	7	28.5%	probably_damaging(0.955)	tolerated(0.17)	neutral(0.458)	NULL
FOXP1	27086	genome.wustl.edu	37	3	71021322	71021322	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000327590	-1	known	p.F554	1.000	5	0.000	9	0.444	0	-	-	-	-	"superfamily_""Winged helix"" DNA-binding domain"
FOXP1	27086	genome.wustl.edu	37	3	71026850	71026850	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032682.4	-1	reviewed	p.F458I	1.000	301	0%	374	32.1%	8	12.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
RYBP	23429	genome.wustl.edu	37	3	72428507	72428507	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012234.4	-1	validated	p.K67T	1.000	416	0.2%	448	32.1%	6	33.3%	unknown(0)	tolerated(0.08)	-	NULL
RYBP	23429	genome.wustl.edu	37	3	72495812	72495812	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000477973	-1	known	p.A86	0.000	152	0%	196	30.1%	0	-	unknown(0)	-	-	NULL
GXYLT2	727936	genome.wustl.edu	37	3	72957696	72957696	+	Missense_Mutation	SNP	G	G	A	rs142024018	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080393.1	+1	provisional	p.E152K	0.998	101	0%	120	34.2%	4	75%	benign(0.054)	tolerated(0.88)	neutral(0.004)	HMMPfam_Glyco_transf_8,superfamily_SSF53448
PPP4R2	151987	genome.wustl.edu	37	3	73112849	73112849	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174907.2	+1	provisional	p.R149*	0.997	208	0%	219	31.5%	4	0%	-	-	-	HMMPfam_PPP4R2
PDZRN3	23024	genome.wustl.edu	37	3	73657761	73657761	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015009.1	-1	provisional	p.G266	1.000	110	0%	127	26%	4	0%	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
ROBO2	6092	genome.wustl.edu	37	3	77530308	77530308	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128929.1	+1	reviewed	p.Y182*	0.996	244	0%	224	27.7%	3	33.3%	possibly_damaging(0.916)	deleterious(0.03)	deleterious(0.732)	NULL
ROBO1	6091	genome.wustl.edu	37	3	78649334	78649334	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002941.3	-1	reviewed	p.R1624*	1.000	424	0.2%	500	31%	7	0%	-	-	-	NULL
CADM2	253559	genome.wustl.edu	37	3	86010619	86010619	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153184.3	+1	validated	p.L257	1.000	177	0.6%	96	31.2%	0	-	-	-	-	HMMSmart_IGc2,HMMPfam_ig,superfamily_SSF48726
CGGBP1	8545	genome.wustl.edu	37	3	88104967	88104967	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008390.1	-1	validated	p.R54C	1.000	82	0%	101	39.6%	36	38.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
EPHA3	2042	genome.wustl.edu	37	3	89528650	89528650	+	Nonstop_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005233.5	+1	reviewed	p.*984Q	1.000	63	0%	88	28.4%	4	25%	-	-	-	NULL
PROS1	5627	genome.wustl.edu	37	3	93603584	93603584	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000313.3	-1	reviewed	p.H494N	0.012	217	0%	263	20.5%	25	20%	benign(0)	tolerated(1)	-	superfamily_ConA_like_lec_gl
EPHA6	285220	genome.wustl.edu	37	3	97466357	97466357	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080448.2	+1	provisional	p.K1073N	1.000	322	0.3%	322	25.5%	0	-	benign(0.189)	tolerated(0.05)	neutral(0.363)	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain
ARL6	84100	genome.wustl.edu	37	3	97486993	97486993	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032146.3	+1	reviewed	p.K14N	1.000	222	0%	274	34.7%	4	75%	possibly_damaging(0.92)	tolerated(0.06)	deleterious(0.694)	HMMSmart_SM00178,HMMSmart_SM00177,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases
ARL6	84100	genome.wustl.edu	37	3	97499058	97499058	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032146.3	+1	reviewed	p.S60*	0.998	162	0%	191	28.8%	2	0%	-	-	-	HMMSmart_SM00178,HMMSmart_SM00177,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases
ARL6	84100	genome.wustl.edu	37	3	97503872	97503872	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032146.3	+1	reviewed	p.D110N	1.000	377	0%	412	34.5%	5	40%	benign(0.33)	tolerated(0.08)	neutral(0.403)	HMMSmart_SM00178,HMMSmart_SM00177,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases
CRYBG3	131544	genome.wustl.edu	37	3	97596403	97596403	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153605.2	+1	validated	p.S174Y	1.000	64	0%	72	12.5%	3	66.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CRYBG3	131544	genome.wustl.edu	37	3	97596701	97596701	+	Missense_Mutation	SNP	G	G	T	rs140793528	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153605.2	+1	validated	p.Q273H	0.993	182	0%	166	30.7%	1	100%	possibly_damaging(0.822)	deleterious(0)	deleterious(0.756)	NULL
GABRR3	200959	genome.wustl.edu	37	3	97705641	97705641	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000329044	-1	known	p.G202	0.028	300	0%	270	30.7%	0	-	-	-	-	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore
OR5AC2	81050	genome.wustl.edu	37	3	97806055	97806055	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_054106.1	+1	provisional	p.E13	0.056	326	0%	408	34.3%	0	-	-	-	-	superfamily_SSF81321
OR5H14	403273	genome.wustl.edu	37	3	97869040	97869040	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005514.1	+1	provisional	p.D271Y	0.001	237	0%	140	25%	0	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR5H15	403274	genome.wustl.edu	37	3	97887635	97887635	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005515.1	+1	provisional	p.F31C	0.961	243	0%	181	32%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_SSF81321
OR5H2	79310	genome.wustl.edu	37	3	98002024	98002024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005482.1	+1	provisional	p.S98Y	0.297	238	0%	219	33.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_SSF81321
OR5K3	403277	genome.wustl.edu	37	3	98110222	98110222	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005516.1	+1	provisional	p.T238I	0.996	306	0%	382	33.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
OR5K1	26339	genome.wustl.edu	37	3	98188730	98188730	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004736.2	+1	provisional	p.L104I	0.860	278	0.4%	158	29.1%	0	-	probably_damaging(0.973)	deleterious(0.01)	deleterious(0.821)	HMMPfam_7tm_1,superfamily_SSF81321
OR5K2	402135	genome.wustl.edu	37	3	98217119	98217119	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004737.1	+1	provisional	p.L199I	0.000	449	0%	333	35.7%	0	-	benign(0.007)	tolerated(0.49)	neutral(0.011)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
LOC100287763	100287763	genome.wustl.edu	37	3	98244076	98244076	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342388.1	+1	model	p.A130V	1.000	42	0%	68	33.8%	0	-	-	-	-	NULL
GPR15	2838	genome.wustl.edu	37	3	98251090	98251090	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005290.1	+1	provisional	p.F71L	0.997	122	0%	170	23.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
CPOX	1371	genome.wustl.edu	37	3	98309485	98309485	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000097.5	-1	reviewed	p.E268*	1.000	182	0%	301	29.9%	10	10%	-	-	-	HMMPfam_Coprogen_oxidas,superfamily_Coprogen_oxidas
DCBLD2	131566	genome.wustl.edu	37	3	98568435	98568435	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080927.3	-1	validated	p.Y147*	1.000	178	0%	262	32.1%	7	28.5%	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
FILIP1L	11259	genome.wustl.edu	37	3	99567594	99567594	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182909.2	-1	validated	p.I976V	0.000	181	0%	211	28.9%	29	0%	benign(0)	tolerated(1)	-	NULL
FILIP1L	11259	genome.wustl.edu	37	3	99569454	99569454	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182909.2	-1	validated	p.E356*	1.000	350	0%	382	29.3%	3	0%	-	-	-	superfamily_Prefoldin,HMMPfam_CortBP2
FILIP1L	11259	genome.wustl.edu	37	3	99569892	99569892	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182909.2	-1	validated	p.E210*	1.000	84	0%	72	33.3%	3	0%	-	-	-	HMMPfam_CortBP2
TBC1D23	55773	genome.wustl.edu	37	3	100037954	100037954	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018309.2	+1	validated	p.E562*	1.000	81	0%	121	19%	10	30%	-	-	-	NULL
TOMM70A	9868	genome.wustl.edu	37	3	100105779	100105779	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014820.3	-1	validated	p.K123T	1.000	263	0%	315	34.6%	7	42.8%	benign(0.018)	tolerated(0.23)	neutral(0.042)	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452
LNP1	348801	genome.wustl.edu	37	3	100174682	100174682	+	Missense_Mutation	SNP	G	G	A	rs193190932	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001085451.1	+1	validated	p.R150Q	0.000	183	0%	321	38%	0	-	benign(0.034)	tolerated(0.34)	neutral(0.025)	NULL
ABI3BP	25890	genome.wustl.edu	37	3	100489681	100489681	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015429.3	-1	validated	p.Q838H	0.994	616	0.2%	731	33%	4	0%	probably_damaging(0.991)	deleterious(0.03)	deleterious(0.808)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
ABI3BP	25890	genome.wustl.edu	37	3	100511568	100511568	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015429.3	-1	validated	p.P645T	0.995	679	0%	367	27%	0	-	probably_damaging(0.954)	deleterious(0.01)	deleterious(0.803)	NULL
ABI3BP	25890	genome.wustl.edu	37	3	100570739	100570739	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015429.3	-1	validated	p.E402G	0.996	218	0%	224	31.7%	1	0%	probably_damaging(0.991)	tolerated(0.3)	deleterious(0.473)	NULL
SENP7	57337	genome.wustl.edu	37	3	101062618	101062618	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020654.3	-1	validated	p.S673Y	1.000	147	0%	168	31.5%	1	100%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
RG9MTD1	54931	genome.wustl.edu	37	3	101283871	101283871	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017819.2	+1	provisional	p.I82	0.000	74	0%	135	31.1%	13	61.5%	-	-	-	NULL
RG9MTD1	54931	genome.wustl.edu	37	3	101284358	101284358	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017819.2	+1	provisional	p.F245I	1.000	57	0%	81	35.8%	25	40%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	HMMPfam_tRNA_m1G_MT
ZBTB11	27107	genome.wustl.edu	37	3	101373567	101373567	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014415.3	-1	validated	p.R764*	1.000	182	0%	238	29.4%	2	50%	-	-	-	superfamily_SSF57667
CEP97	79598	genome.wustl.edu	37	3	101477197	101477197	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024548.2	+1	provisional	p.D583Y	1.000	32	0%	75	34.7%	1	0%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	NULL
FAM55C	91775	genome.wustl.edu	37	3	101540646	101540646	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134456.1	+1	validated	p.R510W	1.000	51	0%	86	31.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CBLB	868	genome.wustl.edu	37	3	105470463	105470463	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170662.3	-1	validated	e4-1	1.000	95	0%	131	27.5%	0	-	-	-	-	-
CCDC54	84692	genome.wustl.edu	37	3	107096927	107096927	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032600.2	+1	provisional	p.E165*	0.223	41	0%	48	35.4%	0	-	-	-	-	NULL
CCDC54	84692	genome.wustl.edu	37	3	107097303	107097303	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032600.2	+1	provisional	p.T290I	0.062	210	0%	200	34.5%	0	-	benign(0.303)	tolerated(0.07)	neutral(0.413)	NULL
BBX	56987	genome.wustl.edu	37	3	107435553	107435553	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142568.1	+1	validated	p.L88I	1.000	130	0%	136	30.9%	5	20%	possibly_damaging(0.836)	deleterious(0.02)	deleterious(0.703)	HMMPfam_HMG_box,HMMSmart_SM00398,superfamily_HMG-box
BBX	56987	genome.wustl.edu	37	3	107520087	107520087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000416476	+1	known	p.S563L	0.145	118	0%	163	36.2%	11	45.4%	unknown(0)	-	-	NULL
MYH15	22989	genome.wustl.edu	37	3	108124195	108124195	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014981.1	-1	validated	p.E1596*	0.998	141	0%	81	34.6%	0	-	-	-	-	HMMPfam_Myosin_tail_1
MYH15	22989	genome.wustl.edu	37	3	108172969	108172969	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014981.1	-1	validated	p.F781L	0.998	167	0%	152	26.3%	0	-	benign(0.002)	tolerated(1)	-	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYH15	22989	genome.wustl.edu	37	3	108204072	108204072	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014981.1	-1	validated	p.A347V	1.000	149	0%	206	33.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MORC1	27136	genome.wustl.edu	37	3	108677836	108677836	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014429.3	-1	reviewed	p.K977N	0.000	131	0%	69	21.7%	0	-	possibly_damaging(0.919)	deleterious(0)	deleterious(0.814)	NULL
MORC1	27136	genome.wustl.edu	37	3	108782079	108782079	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014429.3	-1	reviewed	e10-1	1.000	165	0%	209	33.5%	0	-	-	-	-	-
MORC1	27136	genome.wustl.edu	37	3	108829629	108829629	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014429.3	-1	reviewed	p.D41Y	1.000	106	0%	115	25.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HATPase_c,superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
DPPA4	55211	genome.wustl.edu	37	3	109052826	109052826	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018189.3	-1	validated	p.E23D	0.002	178	0%	293	35.2%	1	100%	benign(0.242)	tolerated(0.05)	neutral(0.370)	NULL
ZBED2	79413	genome.wustl.edu	37	3	111312513	111312513	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024508.3	-1	validated	p.R179Q	0.007	154	0%	183	31.7%	2	50%	possibly_damaging(0.867)	tolerated(0.55)	neutral(0.344)	NULL
PLCXD2	257068	genome.wustl.edu	37	3	111427208	111427208	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153268.3	+1	validated	p.R200Q	0.000	102	0%	109	26.6%	0	-	benign(0.001)	tolerated(0.86)	neutral(0.001)	superfamily_PLC-like_Pdiesterase_TIM-brl
PHLDB2	90102	genome.wustl.edu	37	3	111603156	111603156	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134438.1	+1	validated	p.S78R	0.108	134	0%	176	34.7%	1	0%	possibly_damaging(0.462)	deleterious(0.04)	deleterious(0.500)	NULL
PHLDB2	90102	genome.wustl.edu	37	3	111632426	111632426	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134438.1	+1	validated	p.F532L	0.892	175	0%	237	37.6%	2	50%	benign(0.001)	tolerated(0.45)	neutral(0.012)	NULL
PHLDB2	90102	genome.wustl.edu	37	3	111639200	111639200	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134438.1	+1	validated	p.E645	1.000	305	0%	381	32.3%	0	-	-	-	-	NULL
PHLDB2	90102	genome.wustl.edu	37	3	111671504	111671504	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134438.1	+1	validated	p.S906Y	0.995	216	0%	247	34.4%	1	0%	benign(0.002)	deleterious(0)	neutral(0.445)	NULL
TMPRSS7	344805	genome.wustl.edu	37	3	111785326	111785326	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042575.2	+1	validated	p.R422Q	0.000	53	0%	55	38.2%	0	-	benign(0.002)	tolerated(0.36)	neutral(0.020)	HMMSmart_SM00192,superfamily_LDL receptor-like module
SLC9A10	285335	genome.wustl.edu	37	3	111927042	111927042	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183061.1	-1	validated	p.L657I	0.359	128	0%	123	27.6%	0	-	benign(0.235)	tolerated(0.23)	neutral(0.065)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SLC9A10	285335	genome.wustl.edu	37	3	111927214	111927214	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183061.1	-1	validated	p.F599L	0.000	102	0%	89	30.3%	0	-	benign(0)	tolerated(0.74)	neutral(0.002)	superfamily_Voltage-gated potassium channels
SLC9A10	285335	genome.wustl.edu	37	3	111996635	111996635	+	Missense_Mutation	SNP	G	G	T	rs35619374		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183061.1	-1	validated	p.Q131K	0.960	108	0%	53	28.3%	0	-	benign(0)	tolerated(1)	-	HMMPfam_Na_H_Exchanger
SLC9A10	285335	genome.wustl.edu	37	3	111997697	111997697	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183061.1	-1	validated	p.R66I	0.000	158	0%	142	28.2%	0	-	benign(0)	tolerated(0.2)	neutral(0.049)	HMMPfam_Na_H_Exchanger
CCDC80	151887	genome.wustl.edu	37	3	112357249	112357249	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199511.1	-1	validated	p.L502I	0.003	197	0%	167	34.1%	15	6.6%	possibly_damaging(0.892)	tolerated(0.17)	neutral(0.410)	NULL
GTPBP8	29083	genome.wustl.edu	37	3	112713993	112713993	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014170.2	+1	validated	p.K149N	1.000	120	0%	122	26.2%	4	0%	-	-	-	HMMPfam_MMR_HSR1,superfamily_P-loop containing nucleoside triphosphate hydrolases
GTPBP8	29083	genome.wustl.edu	37	3	112714102	112714102	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014170.2	+1	validated	p.E186*	0.998	123	0%	137	20.4%	8	0%	-	-	-	HMMPfam_MMR_HSR1,superfamily_P-loop containing nucleoside triphosphate hydrolases
C3orf17	25871	genome.wustl.edu	37	3	112724677	112724677	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015412.3	-1	validated	p.Q470H	0.983	184	0.5%	153	34%	27	40.7%	probably_damaging(0.982)	deleterious(0.03)	deleterious(0.791)	NULL
WDR52	55779	genome.wustl.edu	37	3	113022811	113022811	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000393845	-1	known	p.R825C	1.000	374	0.3%	516	32.6%	6	50%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	NULL
WDR52	55779	genome.wustl.edu	37	3	113063555	113063555	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000393845	-1	known	p.R172*	1.000	167	0%	230	32.6%	1	0%	-	-	-	NULL
WDR52	55779	genome.wustl.edu	37	3	113077690	113077690	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000393845	-1	known	p.E137D	0.408	219	0%	253	36.8%	0	-	benign(0.125)	tolerated(0.84)	neutral(0.011)	NULL
WDR52	55779	genome.wustl.edu	37	3	113118757	113118757	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018338.3	-1	validated	p.R522Q	0.000	94	0%	86	38.4%	0	-	benign(0.019)	tolerated(0.53)	neutral(0.009)	superfamily_WD40_like
SPICE1	152185	genome.wustl.edu	37	3	113172600	113172600	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144718.3	-1	validated	p.A619T	0.012	281	0%	437	30.4%	15	60%	benign(0.006)	tolerated(0.35)	neutral(0.021)	NULL
SPICE1	152185	genome.wustl.edu	37	3	113218403	113218403	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144718.3	-1	validated	p.S58	0.251	231	0%	333	33.6%	4	50%	-	-	-	NULL
SIDT1	54847	genome.wustl.edu	37	3	113342559	113342559	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017699.2	+1	validated	p.F762L	1.000	112	0%	168	31.5%	1	0%	benign(0.062)	tolerated(0.53)	neutral(0.011)	NULL
KIAA2018	205717	genome.wustl.edu	37	3	113376660	113376660	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009899.2	-1	validated	p.S1290Y	0.989	104	0%	157	37.6%	0	-	benign(0.113)	deleterious(0.01)	neutral(0.415)	NULL
KIAA2018	205717	genome.wustl.edu	37	3	113378866	113378866	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009899.2	-1	validated	p.L555I	1.000	328	0%	481	32.4%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
KIAA2018	205717	genome.wustl.edu	37	3	113379348	113379348	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009899.2	-1	validated	p.L394S	0.987	112	0%	150	34.7%	2	50%	benign(0.277)	deleterious(0.02)	neutral(0.412)	NULL
GRAMD1C	54762	genome.wustl.edu	37	3	113659167	113659167	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017577.4	+1	validated	p.R628Q	0.432	149	0%	217	34.1%	1	0%	benign(0.014)	tolerated(0.89)	neutral(0.001)	NULL
KIAA1407	57577	genome.wustl.edu	37	3	113729746	113729746	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020817.1	-1	predicted	p.T429N	0.884	172	0%	186	29.6%	1	100%	benign(0)	tolerated(0.14)	neutral(0.249)	NULL
LSAMP	4045	genome.wustl.edu	37	3	116163854	116163854	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002338.3	-1	reviewed	p.R9W	0.999	76	0%	75	34.7%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
TIMMDC1	51300	genome.wustl.edu	37	3	119222391	119222391	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016589.3	+1	validated	p.R125C	0.982	189	0%	313	36.1%	54	20.3%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
CD80	941	genome.wustl.edu	37	3	119246645	119246645	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005191.3	-1	validated	p.L280	0.001	442	0%	692	29.6%	0	-	-	-	-	NULL
PLA1A	51365	genome.wustl.edu	37	3	119328416	119328416	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015900.2	+1	validated	p.Q185H	0.972	139	0%	142	29.6%	4	0%	benign(0.004)	deleterious(0)	neutral(0.445)	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases
PLA1A	51365	genome.wustl.edu	37	3	119347661	119347661	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015900.2	+1	validated	p.R412Q	0.000	106	0%	169	28.4%	7	0%	benign(0.003)	tolerated(0.78)	neutral(0.001)	NULL
COX17	10063	genome.wustl.edu	37	3	119394073	119394073	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005694.1	-1	reviewed	p.E39K	0.997	237	0%	344	34.6%	174	42.5%	probably_damaging(0.96)	tolerated(0.06)	deleterious(0.726)	HMMPfam_COX17
C3orf15	89876	genome.wustl.edu	37	3	119458111	119458111	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033364.3	+1	validated	p.E491*	1.000	169	0%	204	22.1%	1	0%	-	-	-	NULL
NR1I2	8856	genome.wustl.edu	37	3	119531580	119531580	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022002.2	+1	reviewed	p.Q228	0.121	115	0%	133	22.6%	0	-	-	-	-	superfamily_Str_ncl_receptor
FSTL1	11167	genome.wustl.edu	37	3	120115844	120115844	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007085.4	-1	reviewed	e10-1	1.000	374	0%	368	19.3%	1	0%	-	-	-	-
STXBP5L	9515	genome.wustl.edu	37	3	121097632	121097632	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014980.2	+1	validated	p.A773V	1.000	73	0%	85	34.1%	2	50%	benign(0.003)	tolerated(0.27)	neutral(0.034)	NULL
STXBP5L	9515	genome.wustl.edu	37	3	121100156	121100156	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014980.2	+1	validated	p.S812	0.999	78	0%	46	39.1%	0	-	-	-	-	NULL
POLQ	10721	genome.wustl.edu	37	3	121229071	121229071	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199420.3	-1	validated	p.A544G	1.000	105	0%	234	33.8%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	superfamily_P-loop containing nucleoside triphosphate hydrolases
HCLS1	3059	genome.wustl.edu	37	3	121363760	121363760	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005335.4	-1	validated	p.E102*	1.000	91	0%	174	32.2%	14	0%	-	-	-	HMMPfam_HS1_rep
GOLGB1	2804	genome.wustl.edu	37	3	121383366	121383366	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004487.3	-1	validated	p.I3247	0.995	107	0%	182	35.7%	156	43.5%	-	-	-	NULL
GOLGB1	2804	genome.wustl.edu	37	3	121416501	121416501	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004487.3	-1	validated	p.D952Y	0.988	115	0%	104	29.8%	2	0%	possibly_damaging(0.929)	deleterious(0.03)	deleterious(0.740)	superfamily_Spectrin repeat
GOLGB1	2804	genome.wustl.edu	37	3	121417441	121417441	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000489400	-1	known	p.N509S	0.000	136	0%	119	17.6%	8	25%	-	-	-	NULL
GOLGB1	2804	genome.wustl.edu	37	3	121435903	121435903	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004487.3	-1	validated	p.K318N	0.863	141	0%	191	37.2%	7	28.5%	possibly_damaging(0.619)	tolerated(0.08)	deleterious(0.515)	NULL
GOLGB1	2804	genome.wustl.edu	37	3	121448819	121448819	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004487.3	-1	validated	p.E48*	0.443	216	0%	216	28.7%	2	0%	-	-	-	NULL
IQCB1	9657	genome.wustl.edu	37	3	121489233	121489233	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001023570.2	-1	reviewed	p.E586*	1.000	189	0%	242	28.9%	35	54.2%	-	-	-	NULL
EAF2	55840	genome.wustl.edu	37	3	121573588	121573588	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018456.4	+1	validated	p.E86*	1.000	71	0%	66	31.8%	4	0%	-	-	-	HMMPfam_EAF
CD86	942	genome.wustl.edu	37	3	121822477	121822477	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000478741	+1	known	p.K57E	0.000	182	0%	182	30.2%	6	0%	-	-	-	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
CASR	846	genome.wustl.edu	37	3	121975947	121975947	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000388.3	+1	reviewed	p.R69C	1.000	182	0%	218	41.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
CASR	846	genome.wustl.edu	37	3	121981094	121981094	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000388.3	+1	reviewed	p.V404	0.035	129	0%	203	36.9%	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
CASR	846	genome.wustl.edu	37	3	121981223	121981223	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000388.3	+1	reviewed	p.G447	0.674	75	0%	118	33.1%	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
CASR	846	genome.wustl.edu	37	3	122002712	122002712	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000388.3	+1	reviewed	p.F637	1.000	171	0%	254	35%	1	0%	-	-	-	HMMPfam_7tm_3
CCDC58	131076	genome.wustl.edu	37	3	122090589	122090589	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017928.2	-1	validated	p.T37M	1.000	163	0%	227	28.6%	23	21.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Cid2
PARP9	83666	genome.wustl.edu	37	3	122255881	122255881	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031458.2	-1	validated	p.M637R	0.192	357	0%	480	30.8%	6	16.6%	benign(0.344)	tolerated(0.07)	neutral(0.427)	superfamily_ADP-ribosylation
PARP15	165631	genome.wustl.edu	37	3	122334683	122334683	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113523.1	+1	validated	p.P277S	0.001	118	0%	165	29.1%	0	-	benign(0.014)	tolerated(0.09)	neutral(0.297)	NULL
PARP14	54625	genome.wustl.edu	37	3	122411218	122411218	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017554.2	+1	validated	p.E142D	0.095	207	0%	293	33.4%	1	100%	benign(0.025)	tolerated(0.48)	neutral(0.011)	NULL
PARP14	54625	genome.wustl.edu	37	3	122437050	122437050	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017554.2	+1	validated	p.V1378A	0.991	221	0%	290	31.7%	4	0%	possibly_damaging(0.784)	tolerated(0.7)	neutral(0.295)	superfamily_Macro domain-like
SEMA5B	54437	genome.wustl.edu	37	3	122645514	122645514	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031702.2	-1	validated	p.F287L	0.988	36	0%	56	32.1%	1	0%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
MYLK	4638	genome.wustl.edu	37	3	123337506	123337506	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053025.3	-1	reviewed	p.R1827I	1.000	209	0%	294	31.3%	18	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
CCDC14	64770	genome.wustl.edu	37	3	123667877	123667877	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022757.4	-1	validated	p.R159I	0.866	265	0%	320	27.8%	5	20%	possibly_damaging(0.819)	deleterious(0.03)	deleterious(0.674)	NULL
ROPN1	54763	genome.wustl.edu	37	3	123688971	123688971	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017578.2	-1	provisional	p.L164I	1.000	306	0%	367	37.6%	0	-	possibly_damaging(0.722)	tolerated(0.56)	neutral(0.269)	NULL
KALRN	8997	genome.wustl.edu	37	3	124438066	124438066	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024660.3	+1	reviewed	p.F2904I	1.000	112	0%	191	27.7%	0	-	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
ITGB5	3693	genome.wustl.edu	37	3	124482500	124482500	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002213.3	-1	provisional	p.F790L	1.000	186	0%	295	33.9%	98	15.3%	benign(0)	tolerated(0.85)	neutral(0.001)	NULL
MUC13	56667	genome.wustl.edu	37	3	124632044	124632044	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033049.2	-1	validated	p.K375N	0.199	118	0%	164	34.1%	0	-	possibly_damaging(0.84)	deleterious(0.04)	deleterious(0.670)	HMMSmart_SM00181
HEG1	57493	genome.wustl.edu	37	3	124724179	124724179	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020733.1	-1	validated	p.R1076I	0.999	163	0%	217	37.3%	0	-	possibly_damaging(0.92)	deleterious(0.01)	deleterious(0.776)	NULL
HEG1	57493	genome.wustl.edu	37	3	124748188	124748188	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020733.1	-1	validated	p.S154L	0.001	170	0%	230	36.5%	1	0%	benign(0)	deleterious(0)	neutral(0.445)	NULL
ZNF148	7707	genome.wustl.edu	37	3	124952765	124952765	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021964.2	-1	validated	p.R269C	1.000	91	0%	77	23.4%	4	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF148	7707	genome.wustl.edu	37	3	124997978	124997978	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021964.2	-1	validated	p.F191L	1.000	167	0%	172	21.5%	1	100%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ALDH1L1	10840	genome.wustl.edu	37	3	125831637	125831637	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012190.2	-1	reviewed	p.F723	0.993	130	0%	184	71.7%	9	100%	-	-	-	HMMPfam_Aldedh,superfamily_Aldehyde_DH/Histidinol_DH
ALDH1L1	10840	genome.wustl.edu	37	3	125855640	125855640	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012190.2	-1	reviewed	p.K437N	1.000	188	0%	239	32.6%	3	0%	benign(0.006)	deleterious(0.01)	neutral(0.406)	HMMPfam_Aldedh,superfamily_Aldehyde_DH/Histidinol_DH
CCDC37	348807	genome.wustl.edu	37	3	126153213	126153213	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182628.2	+1	validated	p.E539	0.700	38	0%	61	36.1%	1	100%	-	-	-	NULL
CHCHD6	84303	genome.wustl.edu	37	3	126451953	126451953	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032343.1	+1	provisional	p.K100T	0.879	68	0%	99	31.3%	29	37.9%	benign(0.184)	deleterious(0.01)	neutral(0.423)	HMMPfam_DUF737
CHCHD6	84303	genome.wustl.edu	37	3	126633522	126633522	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032343.1	+1	provisional	e6-1	1.000	256	0%	325	33.5%	0	-	-	-	-	-
PLXNA1	5361	genome.wustl.edu	37	3	126737359	126737359	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032242.3	+1	validated	p.E1272K	1.000	29	0%	38	21.1%	51	45%	benign(0.127)	deleterious(0)	neutral(0.455)	NULL
C3orf56	285311	genome.wustl.edu	37	3	126915898	126915898	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000398112	+1	known	p.A124T	0.000	88	0%	108	45.4%	0	-	benign(0.355)	-	-	NULL
PODXL2	50512	genome.wustl.edu	37	3	127379408	127379408	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015720.2	+1	validated	p.E179D	0.259	96	0%	144	29.9%	46	50%	unknown(0)	deleterious(0)	-	NULL
PODXL2	50512	genome.wustl.edu	37	3	127381132	127381132	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015720.2	+1	validated	p.N395S	1.000	103	1%	129	34.9%	92	39.1%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	HMMPfam_CD34_antigen
LOC653712	653712	genome.wustl.edu	37	3	128580590	128580590	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_371663.7	-1	model	p.S89F	1.000	57	0%	65	35.4%	0	-	-	-	-	NULL
ACAD9	28976	genome.wustl.edu	37	3	128618218	128618218	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014049.4	+1	reviewed	p.K241T	1.000	116	0%	217	32.3%	27	25.9%	probably_damaging(0.982)	deleterious(0.01)	deleterious(0.832)	superfamily_AcylCoA_dehyd_NM
RHO	6010	genome.wustl.edu	37	3	129247626	129247626	+	Missense_Mutation	SNP	C	C	T	rs104893769	byCluster	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000539.3	+1	reviewed	p.T17M	1.000	107	0%	118	38.1%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_Rhodopsin_N,superfamily_SSF81321
H1FOO	132243	genome.wustl.edu	37	3	129266376	129266376	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153833.1	+1	reviewed	p.I77	0.997	6	0.000	5	0.800	0	-	-	-	-	"HMMPfam_Linker_histone,HMMSmart_SM00526,superfamily_""Winged helix"" DNA-binding domain"
TMCC1	23023	genome.wustl.edu	37	3	129373847	129373847	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017395.3	-1	validated	p.I537	0.512	250	0%	350	34.3%	15	40%	-	-	-	HMMPfam_Tmemb_cc2
TRH	7200	genome.wustl.edu	37	3	129695980	129695980	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007117.2	+1	validated	p.S217I	0.520	21	0%	39	30.8%	0	-	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
COL6A5	256076	genome.wustl.edu	37	3	130098341	130098341	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153264.5	+1	validated	p.N250H	0.013	132	0%	86	41.9%	0	-	probably_damaging(0.999)	-	-	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300
COL6A5	256076	genome.wustl.edu	37	3	130098548	130098548	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153264.5	+1	validated	p.D319Y	0.822	105	0%	78	34.6%	0	-	benign(0.408)	-	-	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300
COL6A5	256076	genome.wustl.edu	37	3	130104011	130104011	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153264.5	+1	validated	p.S555	0.001	126	0%	98	33.7%	0	-	-	-	-	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300
COL6A5	256076	genome.wustl.edu	37	3	130150536	130150536	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153264.5	+1	validated	p.L1826I	1.000	113	0%	124	32.3%	0	-	probably_damaging(0.984)	-	-	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300
COL6A6	131873	genome.wustl.edu	37	3	130282025	130282025	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102608.1	+1	provisional	p.E60*	0.910	204	0.5%	276	29.7%	0	-	-	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
PIK3R4	30849	genome.wustl.edu	37	3	130427283	130427283	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014602.2	-1	validated	p.M795I	1.000	402	0%	427	30.9%	7	71.4%	benign(0)	tolerated(0.87)	neutral(0.001)	superfamily_WD40_like
PIK3R4	30849	genome.wustl.edu	37	3	130463713	130463713	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014602.2	-1	validated	p.R117H	1.000	121	0%	214	31.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,superfamily_Kinase_like
PIK3R4	30849	genome.wustl.edu	37	3	130463944	130463944	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014602.2	-1	validated	p.V40G	1.000	96	0%	113	24.8%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,superfamily_Kinase_like
MRPL3	11222	genome.wustl.edu	37	3	131181684	131181684	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000511168	-1	known	p.R325W	0.000	196	0%	198	31.8%	126	34.9%	-	-	-	superfamily_Translation proteins
LOC100289095	100289095	genome.wustl.edu	37	3	131245581	131245581	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342398.1	+1	model	p.E93D	0.088	90	0%	72	30.6%	4	0%	-	-	-	NULL
DNAJC13	23317	genome.wustl.edu	37	3	132165351	132165351	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015268.3	+1	validated	p.A34V	1.000	164	0%	138	30.4%	0	-	possibly_damaging(0.61)	deleterious(0.01)	deleterious(0.617)	NULL
DNAJC13	23317	genome.wustl.edu	37	3	132186087	132186087	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015268.3	+1	validated	p.K713T	1.000	190	0%	260	37.3%	2	0%	possibly_damaging(0.61)	tolerated(0.32)	neutral(0.235)	superfamily_ARM repeat
DNAJC13	23317	genome.wustl.edu	37	3	132201123	132201123	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015268.3	+1	validated	p.W976*	1.000	188	0%	253	31.2%	1	0%	-	-	-	superfamily_ARM repeat
DNAJC13	23317	genome.wustl.edu	37	3	132209766	132209766	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015268.3	+1	validated	p.R1165I	1.000	70	0%	54	22.2%	2	50%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	superfamily_ARM repeat
DNAJC13	23317	genome.wustl.edu	37	3	132211376	132211376	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015268.3	+1	validated	p.E1248K	1.000	184	0%	113	29.2%	4	50%	benign(0.021)	deleterious(0.02)	neutral(0.384)	superfamily_ARM repeat
ACAD11	84129	genome.wustl.edu	37	3	132378489	132378489	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032169.4	-1	validated	p.F36S	0.986	115	0%	125	27.2%	0	-	unknown(0)	tolerated(0.06)	-	superfamily_Protein kinase-like (PK-like)
NPHP3	27031	genome.wustl.edu	37	3	132401596	132401596	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153240.3	-1	reviewed	p.R1255W	0.953	194	0%	195	34.4%	10	20%	probably_damaging(0.953)	deleterious(0.02)	deleterious(0.780)	superfamily_TPR-like
NPHP3	27031	genome.wustl.edu	37	3	132418250	132418250	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153240.3	-1	reviewed	p.V644	1.000	214	0%	249	31.7%	0	-	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
TMEM108	66000	genome.wustl.edu	37	3	133099748	133099748	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136469.1	+1	validated	p.S398F	0.747	56	0%	67	37.3%	0	-	possibly_damaging(0.597)	deleterious(0.02)	deleterious(0.590)	NULL
BFSP2	8419	genome.wustl.edu	37	3	133119095	133119095	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003571.2	+1	reviewed	p.V56	0.984	59	0%	60	30%	0	-	-	-	-	NULL
BFSP2	8419	genome.wustl.edu	37	3	133191329	133191329	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003571.2	+1	reviewed	p.R388	0.154	22	0%	27	40.7%	1	0%	-	-	-	NULL
CDV3	55573	genome.wustl.edu	37	3	133306017	133306017	+	Nonstop_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134422.1	+1	validated	p.*214L	1.000	72	0%	89	28.1%	48	18.7%	-	-	-	NULL
TOPBP1	11073	genome.wustl.edu	37	3	133368715	133368715	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007027.3	-1	reviewed	p.R388C	1.000	158	0%	196	29.1%	5	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain
SRPRB	58477	genome.wustl.edu	37	3	133534483	133534483	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021203.3	+1	reviewed	p.D154Y	1.000	184	0%	171	26.9%	127	44%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SRPRB,superfamily_P-loop containing nucleoside triphosphate hydrolases
RAB6B	51560	genome.wustl.edu	37	3	133553450	133553450	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016577.3	-1	validated	p.M177I	1.000	105	0%	160	27.5%	0	-	benign(0)	tolerated(0.19)	neutral(0.050)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00175,superfamily_P-loop containing nucleoside triphosphate hydrolases
RAB6B	51560	genome.wustl.edu	37	3	133614276	133614276	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016577.3	-1	validated	p.R12I	1.000	105	0%	113	34.5%	1	0%	unknown(0)	deleterious(0)	-	HMMSmart_SM00173,superfamily_P-loop containing nucleoside triphosphate hydrolases
RYK	6259	genome.wustl.edu	37	3	133896873	133896873	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005861.2	-1	reviewed	p.K408N	1.000	254	0%	250	38.8%	22	45.4%	possibly_damaging(0.84)	tolerated(0.66)	neutral(0.324)	NULL
RYK	6259	genome.wustl.edu	37	3	133907683	133907683	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000296084	-1	known	p.K368R	1.000	254	0%	317	24.3%	15	46.6%	probably_damaging(0.979)	tolerated(0.48)	neutral(0.432)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
CEP63	80254	genome.wustl.edu	37	3	134268009	134268009	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000504929	+1	known	p.R80K	1.000	89	0%	194	29.4%	12	25%	-	-	-	NULL
CEP63	80254	genome.wustl.edu	37	3	134269047	134269047	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025180.3	+1	reviewed	p.E442G	0.890	110	0%	174	33.3%	23	34.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CEP63	80254	genome.wustl.edu	37	3	134277035	134277035	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025180.3	+1	reviewed	p.N507H	1.000	81	0%	74	40.5%	1	0%	probably_damaging(0.996)	tolerated(0.05)	deleterious(0.807)	NULL
KY	339855	genome.wustl.edu	37	3	134348476	134348476	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178554.4	-1	validated	p.F108L	1.000	207	0%	249	36.1%	0	-	benign(0.003)	tolerated(0.22)	neutral(0.042)	NULL
KY	339855	genome.wustl.edu	37	3	134369752	134369752	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178554.4	-1	validated	p.I17	1.000	58	0%	57	33.3%	0	-	-	-	-	NULL
EPHB1	2047	genome.wustl.edu	37	3	134670711	134670711	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004441.4	+1	reviewed	p.E208K	1.000	230	0%	306	27.5%	0	-	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	NULL
EPHB1	2047	genome.wustl.edu	37	3	134898755	134898755	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004441.4	+1	reviewed	p.E605K	1.000	249	0%	299	32.4%	0	-	probably_damaging(0.997)	tolerated(0.06)	deleterious(0.788)	superfamily_Protein kinase-like (PK-like)
EPHB1	2047	genome.wustl.edu	37	3	134898801	134898801	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004441.4	+1	reviewed	p.K620R	1.000	249	0%	253	34.4%	0	-	probably_damaging(0.98)	tolerated(0.25)	neutral(0.461)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
PPP2R3A	5523	genome.wustl.edu	37	3	135741937	135741937	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181897.1	+1	reviewed	p.R9Q	1.000	199	0%	143	39.9%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
STAG1	10274	genome.wustl.edu	37	3	136076581	136076581	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005862.2	-1	reviewed	p.R1016*	1.000	146	0%	213	30%	7	0%	-	-	-	NULL
STAG1	10274	genome.wustl.edu	37	3	136141451	136141451	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005862.2	-1	reviewed	p.L613R	1.000	91	0%	156	41%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM-type_fold
STAG1	10274	genome.wustl.edu	37	3	136141825	136141825	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005862.2	-1	reviewed	p.F571C	1.000	230	0%	467	31.5%	4	25%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	superfamily_ARM-type_fold
STAG1	10274	genome.wustl.edu	37	3	136152448	136152448	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005862.2	-1	reviewed	p.R534C	1.000	113	0%	140	29.3%	3	33.3%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	superfamily_ARM-type_fold
STAG1	10274	genome.wustl.edu	37	3	136152477	136152477	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005862.2	-1	reviewed	p.A524D	1.000	96	0%	111	36%	4	50%	benign(0.003)	deleterious(0.02)	neutral(0.383)	superfamily_ARM-type_fold
SLC35G2	80723	genome.wustl.edu	37	3	136573464	136573464	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001097599.1	+1	validated	p.K54N	1.000	65	0%	75	36%	0	-	benign(0.059)	tolerated(0.39)	neutral(0.020)	NULL
DZIP1L	199221	genome.wustl.edu	37	3	137807229	137807229	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173543.2	-1	validated	p.E331*	0.855	71	0%	75	28%	1	0%	-	-	-	NULL
DZIP1L	199221	genome.wustl.edu	37	3	137811356	137811356	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173543.2	-1	validated	p.E247K	0.993	418	0%	559	28.4%	1	0%	probably_damaging(0.953)	tolerated(0.05)	deleterious(0.742)	NULL
A4GNT	51146	genome.wustl.edu	37	3	137843314	137843314	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016161.2	-1	reviewed	p.Y272C	0.989	168	0%	245	35.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Gb3_synth
A4GNT	51146	genome.wustl.edu	37	3	137843549	137843549	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016161.2	-1	reviewed	p.I194L	1.000	65	0%	129	34.1%	0	-	benign(0.013)	deleterious(0.04)	neutral(0.349)	NULL
ARMC8	25852	genome.wustl.edu	37	3	137960644	137960644	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015396.3	+1	validated	p.R272Q	1.000	202	0%	357	31.9%	19	26.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
PIK3CB	5291	genome.wustl.edu	37	3	138383891	138383891	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006219.1	-1	provisional	p.E887*	1.000	94	1.1%	153	33.3%	4	50%	-	-	-	HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,superfamily_Kinase_like
PRR23A	729627	genome.wustl.edu	37	3	138724463	138724463	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134659.1	-1	validated	p.F216	0.000	102	0%	158	30.4%	0	-	-	-	-	HMMPfam_DUF2476
MRPS22	56945	genome.wustl.edu	37	3	139065787	139065787	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000466690	+1	known	p.E76K	0.636	118	0%	164	35.4%	10	50%	-	-	-	HMMPfam_MRP-S22
COPB2	9276	genome.wustl.edu	37	3	139097029	139097029	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004766.2	-1	validated	p.D120Y	1.000	168	0%	278	28.8%	47	48.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
CLSTN2	64084	genome.wustl.edu	37	3	140185522	140185522	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022131.2	+1	validated	p.F431	1.000	90	0%	114	31.6%	0	-	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
CLSTN2	64084	genome.wustl.edu	37	3	140282885	140282885	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022131.2	+1	validated	p.V855	1.000	262	0%	295	34.2%	0	-	-	-	-	NULL
ACPL2	92370	genome.wustl.edu	37	3	140979095	140979095	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037172.1	+1	validated	p.F26	1.000	141	0%	158	29.1%	6	16.6%	-	-	-	NULL
ZBTB38	253461	genome.wustl.edu	37	3	141164564	141164564	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080412.2	+1	validated	p.H1112N	1.000	61	0%	138	33.3%	3	33.3%	probably_damaging(0.99)	deleterious(0.03)	deleterious(0.806)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
RASA2	5922	genome.wustl.edu	37	3	141291492	141291492	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006506.2	+1	reviewed	p.R404Q	0.982	159	0%	238	30.7%	2	0%	benign(0.013)	tolerated(0.07)	neutral(0.320)	HMMPfam_RasGAP,HMMSmart_RasGAP,superfamily_Rho_GAP
TFDP2	7029	genome.wustl.edu	37	3	141724334	141724334	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000489671	-1	known	p.K45N	1.000	292	0%	469	28.6%	12	33.3%	benign(0.074)	tolerated(0.25)	neutral(0.042)	NULL
GK5	256356	genome.wustl.edu	37	3	141884584	141884584	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039547.2	-1	validated	p.K490N	1.000	265	0%	323	29.4%	4	0%	benign(0.002)	tolerated(0.08)	neutral(0.300)	HMMPfam_FGGY_C,superfamily_Actin-like ATPase domain
GK5	256356	genome.wustl.edu	37	3	141896389	141896389	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039547.2	-1	validated	p.K360Q	1.000	220	0%	350	34.9%	3	0%	possibly_damaging(0.833)	tolerated(0.5)	neutral(0.328)	HMMPfam_FGGY_C,superfamily_Actin-like ATPase domain
ATR	545	genome.wustl.edu	37	3	142241601	142241601	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001184.3	-1	reviewed	p.R1412Q	1.000	183	0%	188	34%	1	0%	possibly_damaging(0.791)	tolerated(0.32)	neutral(0.321)	superfamily_ARM repeat
ATR	545	genome.wustl.edu	37	3	142275252	142275252	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001184.3	-1	reviewed	p.S684Y	0.975	114	0%	149	32.9%	0	-	probably_damaging(0.982)	deleterious(0.03)	deleterious(0.791)	superfamily_ARM repeat
PLS1	5357	genome.wustl.edu	37	3	142395006	142395006	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145319.1	+1	reviewed	p.E124D	1.000	156	0%	200	21.5%	4	0%	benign(0.001)	deleterious(0.01)	neutral(0.406)	PatternScan_ACTININ_1,HMMPfam_CH,HMMSmart_CH,superfamily_Calponin-homology,superfamily_SSF47473
PLS1	5357	genome.wustl.edu	37	3	142423410	142423410	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145319.1	+1	reviewed	p.T537	0.997	75	0%	103	39.8%	11	81.8%	-	-	-	HMMPfam_CH,HMMSmart_CH,superfamily_Calponin-homology
PLS1	5357	genome.wustl.edu	37	3	142430410	142430410	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145319.1	+1	reviewed	p.R566H	1.000	177	0%	218	32.6%	13	46.1%	possibly_damaging(0.925)	deleterious(0.01)	deleterious(0.779)	HMMPfam_CH,HMMSmart_CH,superfamily_Calponin-homology
PAQR9	344838	genome.wustl.edu	37	3	142681065	142681065	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198504.2	-1	validated	p.E372K	0.106	72	0%	92	34.8%	0	-	benign(0.015)	tolerated(0.27)	neutral(0.034)	NULL
PLOD2	5352	genome.wustl.edu	37	3	145878681	145878681	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182943.2	-1	reviewed	p.S32	0.000	12	0%	10	40%	5	0%	-	-	-	NULL
PLSCR4	57088	genome.wustl.edu	37	3	145914465	145914465	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020353.2	-1	validated	p.R247H	0.001	183	0%	169	33.7%	3	0%	probably_damaging(0.974)	tolerated(0.53)	neutral(0.423)	HMMPfam_Scramblase
PLSCR2	57047	genome.wustl.edu	37	3	146173169	146173169	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020359.1	-1	provisional	p.D60Y	0.984	191	0.5%	170	30.6%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Scramblase
ZIC1	7545	genome.wustl.edu	37	3	147131143	147131143	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000488404	+1	known	p.S72Y	1.000	146	0%	244	35.2%	120	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
AGTR1	185	genome.wustl.edu	37	3	148459793	148459793	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000685.4	+1	reviewed	p.A324V	0.997	143	0%	203	36%	1	0%	benign(0)	tolerated(1)	-	superfamily_Family A G protein-coupled receptor-like
CPB1	1360	genome.wustl.edu	37	3	148562487	148562487	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001871.2	+1	reviewed	p.R237	1.000	209	0%	163	32.5%	0	-	-	-	-	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases
CPA3	1359	genome.wustl.edu	37	3	148600365	148600365	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001870.2	+1	reviewed	p.F254C	1.000	138	0%	145	35.9%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases
HLTF	6596	genome.wustl.edu	37	3	148759286	148759286	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003071.3	-1	reviewed	p.Q789	0.999	135	0%	137	36.5%	11	27.2%	-	-	-	HMMSmart_SM00184,HMMPfam_zf-C3HC4,superfamily_RING/U-box
HLTF	6596	genome.wustl.edu	37	3	148766718	148766718	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003071.3	-1	reviewed	p.R563Q	1.000	360	0%	443	33.9%	7	57.1%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
HLTF	6596	genome.wustl.edu	37	3	148802585	148802585	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003071.3	-1	reviewed	p.E38*	1.000	136	0%	275	32%	1	100%	-	-	-	NULL
CP	1356	genome.wustl.edu	37	3	148905986	148905986	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000096.3	-1	reviewed	p.D573Y	0.967	135	0%	122	36.1%	8	12.5%	benign(0.181)	tolerated(0.05)	neutral(0.362)	superfamily_Cupredoxins
TM4SF18	116441	genome.wustl.edu	37	3	149040145	149040145	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138786.3	-1	validated	p.S163	0.999	137	0%	168	28.6%	1	0%	-	-	-	HMMPfam_L6_membrane
WWTR1	25937	genome.wustl.edu	37	3	149238745	149238745	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015472.4	-1	validated	p.I350	0.555	262	0%	409	31.1%	55	32.7%	-	-	-	NULL
COMMD2	51122	genome.wustl.edu	37	3	149469151	149469151	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000483708	-1	known	p.F89L	0.000	135	0%	270	33.7%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ANKUB1	389161	genome.wustl.edu	37	3	149485514	149485514	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144960.1	-1	predicted	p.I312T	1.000	95	0%	144	45.1%	0	-	probably_damaging(0.99)	deleterious(0.02)	deleterious(0.825)	NULL
TSC22D2	9819	genome.wustl.edu	37	3	150176284	150176284	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014779.2	+1	provisional	p.S735Y	1.000	145	0%	196	40.3%	15	46.6%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_TSC22
EIF2A	83939	genome.wustl.edu	37	3	150281397	150281397	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032025.3	+1	validated	p.N130H	1.000	65	0%	72	31.9%	27	29.6%	possibly_damaging(0.658)	deleterious(0.04)	deleterious(0.582)	superfamily_WD40 repeat-like
FAM194A	131831	genome.wustl.edu	37	3	150384632	150384632	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152394.3	-1	validated	p.S557Y	0.464	198	0%	385	36.1%	0	-	benign(0.012)	tolerated(1)	neutral(0.001)	NULL
FAM194A	131831	genome.wustl.edu	37	3	150384787	150384787	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152394.3	-1	validated	p.I505	0.649	185	0%	301	34.6%	0	-	-	-	-	NULL
GPR171	29909	genome.wustl.edu	37	3	150916334	150916334	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013308.3	-1	validated	p.F280	0.944	124	0%	157	28%	2	0%	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
P2RY13	53829	genome.wustl.edu	37	3	151045887	151045887	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176894.2	-1	reviewed	p.F319L	0.999	329	0%	233	57.5%	0	-	benign(0.013)	tolerated(0.27)	neutral(0.034)	superfamily_Family A G protein-coupled receptor-like
MED12L	116931	genome.wustl.edu	37	3	151105609	151105609	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053002.4	+1	reviewed	p.V1665	0.999	108	0%	134	29.9%	0	-	-	-	-	NULL
MED12L	116931	genome.wustl.edu	37	3	151105932	151105932	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053002.4	+1	reviewed	p.R1773L	1.000	69	0%	113	43.4%	0	-	possibly_damaging(0.833)	tolerated(0.05)	deleterious(0.663)	NULL
MED12L	116931	genome.wustl.edu	37	3	151131060	151131060	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053002.4	+1	reviewed	p.R2057*	0.955	82	0%	102	40.2%	0	-	-	-	-	NULL
IGSF10	285313	genome.wustl.edu	37	3	151171430	151171430	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178822.4	-1	validated	p.N153D	0.998	127	0%	141	32.6%	0	-	benign(0.051)	deleterious(0)	neutral(0.448)	HMMSmart_SM00369,superfamily_L domain-like
AADAC	13	genome.wustl.edu	37	3	151531964	151531964	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001086.2	+1	reviewed	p.S5L	0.000	159	0%	193	32.1%	5	80%	benign(0.001)	tolerated(0.19)	neutral(0.050)	NULL
C3orf79	152118	genome.wustl.edu	37	3	153220233	153220233	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001101337.1	+1	provisional	p.F89V	0.079	149	0%	159	37.7%	0	-	unknown(0)	-	-	NULL
DHX36	170506	genome.wustl.edu	37	3	154002693	154002693	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020865.2	-1	validated	p.M705I	1.000	152	0%	163	31.3%	21	28.5%	possibly_damaging(0.531)	tolerated(0.09)	deleterious(0.475)	HMMPfam_HA2,superfamily_SSF52540
DHX36	170506	genome.wustl.edu	37	3	154013122	154013122	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020865.2	-1	validated	p.F519C	1.000	58	0%	65	33.8%	9	22.2%	benign(0.045)	tolerated(0.41)	neutral(0.017)	HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540
DHX36	170506	genome.wustl.edu	37	3	154029441	154029441	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020865.2	-1	validated	p.S209L	1.000	68	0%	37	43.2%	3	0%	benign(0.361)	deleterious(0.01)	deleterious(0.520)	HMMSmart_DEXDc,superfamily_SSF52540
DHX36	170506	genome.wustl.edu	37	3	154041969	154041969	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020865.2	-1	validated	p.R79	0.901	54	0%	83	25.3%	0	-	-	-	-	NULL
GPR149	344758	genome.wustl.edu	37	3	154055916	154055916	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001038705.1	-1	provisional	p.E590*	1.000	191	0%	155	24.5%	0	-	-	-	-	NULL
GPR149	344758	genome.wustl.edu	37	3	154147181	154147181	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001038705.1	-1	provisional	p.S75F	1.000	61	0%	94	40.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
MME	4311	genome.wustl.edu	37	3	154889945	154889945	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000902.3	+1	reviewed	p.L674V	0.994	246	0%	149	32.9%	0	-	benign(0.022)	tolerated(0.3)	neutral(0.030)	"HMMPfam_Peptidase_M13,superfamily_Metalloproteases (""zincins"") catalytic domain"
SLC33A1	9197	genome.wustl.edu	37	3	155547593	155547593	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004733.2	-1	reviewed	p.S456P	1.000	92	0%	182	26.4%	35	42.8%	possibly_damaging(0.908)	deleterious(0.04)	deleterious(0.710)	superfamily_MFS general substrate transporter
GMPS	8833	genome.wustl.edu	37	3	155640024	155640024	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003875.2	+1	reviewed	p.C456F	1.000	101	0%	113	27.4%	34	38.2%	benign(0.001)	tolerated(0.7)	neutral(0.002)	superfamily_Adenine nucleotide alpha hydrolases-like
GMPS	8833	genome.wustl.edu	37	3	155655429	155655429	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003875.2	+1	reviewed	p.R677Q	1.000	157	0%	122	25.4%	41	41.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GMP_synt_C,superfamily_GMP synthetase C-terminal dimerisation domain
VEPH1	79674	genome.wustl.edu	37	3	157031515	157031515	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024621.2	-1	validated	p.Q635H	0.928	122	0%	167	25.1%	2	0%	benign(0.001)	tolerated(0.32)	neutral(0.024)	NULL
VEPH1	79674	genome.wustl.edu	37	3	157082206	157082206	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024621.2	-1	validated	p.K408R	1.000	488	0%	445	35.5%	0	-	probably_damaging(0.996)	tolerated(0.18)	deleterious(0.518)	NULL
VEPH1	79674	genome.wustl.edu	37	3	157131796	157131796	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024621.2	-1	validated	p.E260D	1.000	203	0%	153	34%	0	-	benign(0.02)	tolerated(0.35)	neutral(0.022)	NULL
VEPH1	79674	genome.wustl.edu	37	3	157213102	157213102	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024621.2	-1	validated	p.D13Y	1.000	242	0%	225	35.6%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
RSRC1	51319	genome.wustl.edu	37	3	157840003	157840003	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016625.2	+1	provisional	p.R37Q	1.000	148	0%	211	31.8%	14	35.7%	unknown(0)	deleterious(0.02)	-	NULL
MLF1	4291	genome.wustl.edu	37	3	158317907	158317907	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022443.3	+1	validated	p.K171N	1.000	88	0%	99	32.3%	77	45.4%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	HMMPfam_Mlf1IP
RARRES1	5918	genome.wustl.edu	37	3	158422610	158422610	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206963.1	-1	reviewed	p.Y214*	0.145	145	0%	211	34.1%	12	0%	-	-	-	HMMPfam_Latexin
MFSD1	64747	genome.wustl.edu	37	3	158527072	158527072	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022736.2	+1	validated	p.R182I	1.000	151	0%	122	32%	16	12.5%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
MFSD1	64747	genome.wustl.edu	37	3	158531787	158531787	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022736.2	+1	validated	p.L195	0.998	288	0%	386	30.3%	26	30.7%	-	-	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SCHIP1	29970	genome.wustl.edu	37	3	159605510	159605510	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014575.2	+1	provisional	p.S337Y	1.000	132	0%	170	28.2%	3	0%	probably_damaging(0.991)	tolerated(0.19)	deleterious(0.493)	HMMPfam_SCHIP-1
IFT80	57560	genome.wustl.edu	37	3	160000331	160000331	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020800.1	-1	validated	p.K484T	1.000	158	0%	120	24.2%	6	33.3%	possibly_damaging(0.926)	deleterious(0.02)	deleterious(0.758)	superfamily_Cyt_cd1_haem_C
IFT80	57560	genome.wustl.edu	37	3	160037566	160037566	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020800.1	-1	validated	p.T313	0.993	231	0.4%	112	43.8%	4	75%	-	-	-	superfamily_Cyt_cd1_haem_C
SMC4	10051	genome.wustl.edu	37	3	160120474	160120474	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002800.1	+1	validated	p.C110S	1.000	114	0%	128	34.4%	2	50%	benign(0)	tolerated(0.57)	neutral(0.006)	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
SMC4	10051	genome.wustl.edu	37	3	160135597	160135597	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002800.1	+1	validated	p.I508	1.000	123	0%	119	31.9%	10	70%	-	-	-	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
SMC4	10051	genome.wustl.edu	37	3	160149471	160149471	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002800.1	+1	validated	p.I1052S	0.987	75	0%	81	35.8%	44	34%	benign(0)	tolerated(0.73)	neutral(0.002)	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
SMC4	10051	genome.wustl.edu	37	3	160151484	160151484	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002800.1	+1	validated	p.R1252*	1.000	96	1%	113	23.9%	32	43.7%	-	-	-	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
KPNA4	3840	genome.wustl.edu	37	3	160233252	160233252	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002268.3	-1	reviewed	p.E340D	1.000	187	0%	298	26.2%	39	53.8%	benign(0.026)	tolerated(0.38)	neutral(0.019)	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
B3GALNT1	8706	genome.wustl.edu	37	3	160804232	160804232	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001038628.1	-1	reviewed	p.K104T	0.927	175	0%	220	31.4%	3	100%	benign(0.315)	deleterious(0)	deleterious(0.543)	HMMPfam_Galactosyl_T
SI	6476	genome.wustl.edu	37	3	164700169	164700169	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001041.3	-1	reviewed	p.R1759S	0.169	422	0%	265	25.7%	0	-	benign(0)	tolerated(0.91)	-	NULL
SI	6476	genome.wustl.edu	37	3	164724711	164724711	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001041.3	-1	reviewed	p.F1433L	1.000	143	0%	138	37.7%	0	-	benign(0.002)	tolerated(0.65)	neutral(0.003)	HMMPfam_Glyco_hydro_31,superfamily_(Trans)glycosidases
SI	6476	genome.wustl.edu	37	3	164757713	164757713	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001041.3	-1	reviewed	p.W736R	1.000	205	0%	171	26.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_hydro_31
SI	6476	genome.wustl.edu	37	3	164764639	164764639	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001041.3	-1	reviewed	p.G626fs	1.000	-	-	-	-	-	-	-	-	-	HMMPfam_Glyco_hydro_31,superfamily_(Trans)glycosidases
SLITRK3	22865	genome.wustl.edu	37	3	164905894	164905894	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014926.2	-1	validated	p.K909E	1.000	196	0%	193	33.2%	0	-	benign(0.247)	deleterious(0.02)	neutral(0.408)	NULL
SLITRK3	22865	genome.wustl.edu	37	3	164907386	164907386	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014926.2	-1	validated	p.K411N	1.000	207	0%	296	30.4%	0	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	superfamily_SSF52058
BCHE	590	genome.wustl.edu	37	3	165547987	165547987	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000055.2	-1	reviewed	p.G279S	0.782	134	0%	106	34%	0	-	possibly_damaging(0.835)	deleterious(0.01)	deleterious(0.724)	HMMPfam_COesterase,superfamily_SSF53474
ZBBX	79740	genome.wustl.edu	37	3	166958694	166958694	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024687.2	-1	validated	p.D764Y	0.988	271	0%	166	27.1%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
ZBBX	79740	genome.wustl.edu	37	3	167000227	167000227	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024687.2	-1	validated	p.E646*	0.000	147	0%	177	31.6%	1	0%	-	-	-	NULL
ZBBX	79740	genome.wustl.edu	37	3	167023502	167023502	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024687.2	-1	validated	p.E552*	0.016	163	0%	141	29.8%	1	0%	-	-	-	NULL
ZBBX	79740	genome.wustl.edu	37	3	167090644	167090644	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024687.2	-1	validated	p.N16H	1.000	101	0%	89	33.7%	0	-	probably_damaging(0.991)	tolerated(0.08)	deleterious(0.744)	NULL
SERPINI2	5276	genome.wustl.edu	37	3	167184889	167184889	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006217.3	-1	reviewed	p.K144N	0.905	244	0%	156	36.5%	0	-	possibly_damaging(0.739)	tolerated(0.44)	neutral(0.283)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
SERPINI2	5276	genome.wustl.edu	37	3	167189541	167189541	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006217.3	-1	reviewed	p.E28K	0.729	275	0%	170	22.9%	0	-	possibly_damaging(0.471)	deleterious(0.01)	deleterious(0.561)	HMMPfam_Serpin,superfamily_Prot_inh_serpin
WDR49	151790	genome.wustl.edu	37	3	167218008	167218008	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178824.3	-1	provisional	p.E636D	0.974	141	0%	167	40.1%	0	-	benign(0)	tolerated(0.36)	neutral(0.020)	NULL
WDR49	151790	genome.wustl.edu	37	3	167248990	167248990	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178824.3	-1	provisional	p.V359I	0.001	227	0%	188	30.3%	0	-	benign(0.265)	tolerated(0.93)	neutral(0.028)	HMMSmart_SM00320,superfamily_WD40 repeat-like
SERPINI1	5274	genome.wustl.edu	37	3	167508281	167508281	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122752.1	+1	reviewed	p.F124L	0.998	185	0%	204	31.4%	2	50%	possibly_damaging(0.944)	deleterious(0.01)	deleterious(0.794)	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
GOLIM4	27333	genome.wustl.edu	37	3	167728167	167728167	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014498.3	-1	reviewed	p.R661*	0.027	257	0%	339	29.2%	36	38.8%	-	-	-	NULL
ARPM1	84517	genome.wustl.edu	37	3	169485414	169485414	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032487.4	-1	validated	p.R309W	0.998	127	0%	209	29.2%	5	40%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067
LRRIQ4	344657	genome.wustl.edu	37	3	169555413	169555413	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080460.1	+1	provisional	p.K559N	1.000	101	0%	165	32.1%	0	-	unknown(0)	-	-	NULL
LRRC31	79782	genome.wustl.edu	37	3	169557829	169557829	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024727.2	-1	validated	p.E534*	0.012	174	0%	260	30.8%	0	-	-	-	-	NULL
SAMD7	344658	genome.wustl.edu	37	3	169644785	169644785	+	Silent	SNP	G	G	A	rs187673683	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182610.2	+1	provisional	p.T245	0.000	80	0%	156	34%	0	-	-	-	-	NULL
SAMD7	344658	genome.wustl.edu	37	3	169644816	169644816	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182610.2	+1	provisional	p.E256K	0.075	71	0%	139	31.7%	0	-	benign(0.079)	tolerated(0.18)	neutral(0.061)	NULL
SAMD7	344658	genome.wustl.edu	37	3	169654199	169654199	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000492527	+1	known	p.W46*	1.000	153	0%	203	41.9%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_SAM_1,superfamily_SAM/Pointed domain
EIF5A2	56648	genome.wustl.edu	37	3	170625563	170625563	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020390.5	-1	validated	p.D11	0.536	107	0%	169	29.6%	0	-	-	-	-	NULL
SLC2A2	6514	genome.wustl.edu	37	3	170716177	170716177	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000340.1	-1	reviewed	p.F393	0.000	41	0%	26	34.6%	0	-	-	-	-	HMMPfam_Sugar_tr,superfamily_MFS_gen_substrate_transporter
TNIK	23043	genome.wustl.edu	37	3	170819244	170819244	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015028.2	-1	validated	p.R862K	1.000	312	0%	207	35.3%	1	0%	benign(0)	tolerated(0.19)	neutral(0.050)	NULL
TNIK	23043	genome.wustl.edu	37	3	170843941	170843941	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015028.2	-1	validated	e17-1	1.000	83	0%	115	27.8%	0	-	-	-	-	-
PLD1	5337	genome.wustl.edu	37	3	171410153	171410153	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002662.3	-1	validated	p.R436M	1.000	218	0%	247	27.1%	1	0%	probably_damaging(0.981)	deleterious(0.02)	deleterious(0.808)	superfamily_Phospholipase D/nuclease
GHSR	2693	genome.wustl.edu	37	3	172165473	172165473	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198407.2	-1	reviewed	p.R244H	1.000	37	0%	38	36.8%	0	-	benign(0.287)	deleterious(0.03)	neutral(0.453)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ECT2	1894	genome.wustl.edu	37	3	172480572	172480572	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018098.4	+1	reviewed	p.K296N	1.000	235	0%	284	32%	11	54.5%	benign(0.019)	tolerated(0.44)	neutral(0.014)	HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain
ECT2	1894	genome.wustl.edu	37	3	172491806	172491806	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018098.4	+1	reviewed	p.K483N	1.000	189	0%	317	28.4%	5	80%	benign(0.001)	tolerated(0.53)	neutral(0.007)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
SPATA16	83893	genome.wustl.edu	37	3	172607463	172607463	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031955.5	-1	reviewed	p.F536C	1.000	180	0%	145	37.9%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SPATA16	83893	genome.wustl.edu	37	3	172834946	172834946	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031955.5	-1	reviewed	p.Y192	0.161	229	0%	268	28.7%	0	-	-	-	-	superfamily_TPR-like
SPATA16	83893	genome.wustl.edu	37	3	172835474	172835474	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031955.5	-1	reviewed	p.I16	0.000	287	0%	292	38%	0	-	-	-	-	NULL
NAALADL2	254827	genome.wustl.edu	37	3	175520944	175520944	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207015.2	+1	validated	p.K781E	1.000	290	0%	139	34.5%	0	-	possibly_damaging(0.767)	tolerated(0.06)	deleterious(0.607)	superfamily_Transferrin receptor ectodomain C-terminal domain
ZMAT3	64393	genome.wustl.edu	37	3	178742823	178742823	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022470.3	-1	reviewed	p.E284D	1.000	213	0%	276	33.3%	2	0%	possibly_damaging(0.942)	deleterious(0)	deleterious(0.832)	NULL
PIK3CA	5290	genome.wustl.edu	37	3	178916648	178916648	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006218.2	+1	reviewed	p.G12D	1.000	54	0%	94	42.6%	2	50%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	NULL
PIK3CA	5290	genome.wustl.edu	37	3	178928068	178928068	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006218.2	+1	reviewed	p.P449L	1.000	231	0%	305	29.2%	4	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PI3K_C2,superfamily_C2_CaLB
PIK3CA	5290	genome.wustl.edu	37	3	178936023	178936023	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006218.2	+1	reviewed	p.E522A	1.000	98	0%	75	25.3%	3	0%	benign(0)	tolerated(0.41)	neutral(0.015)	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold
GNB4	59345	genome.wustl.edu	37	3	179137238	179137238	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021629.3	-1	reviewed	p.L51P	1.000	267	0%	253	34%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
NDUFB5	4711	genome.wustl.edu	37	3	179341807	179341807	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000482604	+1	known	p.R200Q	0.940	155	0%	257	21.4%	76	22.3%	-	-	-	HMMPfam_NDUF_B5
USP13	8975	genome.wustl.edu	37	3	179424772	179424772	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003940.2	+1	validated	p.K176N	1.000	135	0%	224	31.2%	1	0%	possibly_damaging(0.619)	deleterious(0.01)	deleterious(0.621)	NULL
CCDC39	339829	genome.wustl.edu	37	3	180334342	180334342	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181426.1	-1	validated	p.T850A	1.000	134	0%	96	30.2%	0	-	unknown(0)	-	-	NULL
CCDC39	339829	genome.wustl.edu	37	3	180359914	180359914	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181426.1	-1	validated	p.E581*	1.000	298	0%	401	33.9%	0	-	-	-	-	NULL
CCDC39	339829	genome.wustl.edu	37	3	180377361	180377361	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181426.1	-1	validated	p.L206W	1.000	522	0%	596	36.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MCF2L2	23101	genome.wustl.edu	37	3	182923938	182923938	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015078.2	-1	validated	p.R926Q	0.005	209	0%	344	30.5%	0	-	benign(0.009)	tolerated(0.66)	neutral(0.003)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
MCF2L2	23101	genome.wustl.edu	37	3	182941944	182941944	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015078.2	-1	validated	p.K717T	1.000	157	0%	227	38.3%	0	-	probably_damaging(0.957)	deleterious(0)	deleterious(0.845)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
MCF2L2	23101	genome.wustl.edu	37	3	183035909	183035909	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015078.2	-1	validated	p.L234I	0.309	86	0%	196	33.7%	0	-	benign(0.01)	tolerated(0.26)	neutral(0.035)	NULL
KLHL6	89857	genome.wustl.edu	37	3	183245782	183245782	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130446.2	-1	validated	p.D104Y	1.000	214	0%	338	34.9%	0	-	benign(0.267)	deleterious(0.03)	neutral(0.393)	HMMSmart_BTB,superfamily_BTB/POZ_fold,HMMPfam_BTB
KLHL24	54800	genome.wustl.edu	37	3	183368711	183368711	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017644.3	+1	validated	p.N189K	0.560	172	0%	266	33.8%	10	40%	benign(0)	tolerated(0.53)	neutral(0.007)	HMMPfam_BACK
HTR3D	200909	genome.wustl.edu	37	3	183756601	183756601	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145143.1	+1	reviewed	p.G351	0.000	135	0%	166	34.9%	0	-	-	-	-	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore
AP2M1	1173	genome.wustl.edu	37	3	183899975	183899975	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004068.3	+1	reviewed	p.Q334*	1.000	123	0%	261	21.8%	213	4.2%	-	-	-	HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
ABCF3	55324	genome.wustl.edu	37	3	183908823	183908823	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018358.2	+1	validated	p.V476	0.441	212	0%	337	30.6%	55	50.9%	-	-	-	NULL
VWA5B2	90113	genome.wustl.edu	37	3	183952069	183952069	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138345.1	+1	provisional	p.S235Y	1.000	57	0%	53	32.1%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
VWA5B2	90113	genome.wustl.edu	37	3	183957737	183957737	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138345.1	+1	provisional	p.A885T	1.000	39	0%	32	34.4%	0	-	benign(0.127)	tolerated(1)	neutral(0.011)	NULL
VWA5B2	90113	genome.wustl.edu	37	3	183959012	183959012	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138345.1	+1	provisional	p.S1000	0.000	41	0%	54	24.1%	0	-	-	-	-	NULL
PSMD2	5708	genome.wustl.edu	37	3	184023682	184023682	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002808.3	+1	reviewed	p.R556C	1.000	125	0%	229	35.4%	159	43.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_ARM-type_fold
EIF4G1	1981	genome.wustl.edu	37	3	184043161	184043161	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000448284	+1	known	p.G39E	1.000	89	0%	159	39.6%	151	29.8%	-	-	-	HMMPfam_MIF4G,superfamily_ARM repeat
FAM131A	131408	genome.wustl.edu	37	3	184056210	184056210	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000383847	+1	known	p.E42K	0.998	86	0%	111	25.2%	3	33.3%	possibly_damaging(0.653)	tolerated(0.18)	neutral(0.286)	NULL
CLCN2	1181	genome.wustl.edu	37	3	184076907	184076907	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004366.4	-1	reviewed	p.Y26H	0.998	34	0%	39	20.5%	7	57.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CHRD	8646	genome.wustl.edu	37	3	184100704	184100704	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003741.2	+1	reviewed	p.L348H	1.000	99	0%	179	33.5%	12	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_CHRD,HMMSmart_SM00754
EPHB3	2049	genome.wustl.edu	37	3	184290385	184290385	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004443.3	+1	reviewed	p.R93C	0.999	61	0%	102	38.2%	15	46.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ephrin_lbd,HMMSmart_EPH_lbd,superfamily_Gal_bind_like
VPS8	23355	genome.wustl.edu	37	3	184658007	184658007	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009921.2	+1	validated	p.F1004C	1.000	62	0%	54	38.9%	12	58.3%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_ARM-type_fold
VPS8	23355	genome.wustl.edu	37	3	184714156	184714156	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009921.2	+1	validated	p.D1235Y	1.000	98	0%	164	32.9%	24	45.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C3orf70	285382	genome.wustl.edu	37	3	184870451	184870451	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025266.1	-1	predicted	p.K54T	1.000	23	0%	22	50%	0	-	possibly_damaging(0.564)	deleterious(0)	deleterious(0.637)	NULL
EHHADH	1962	genome.wustl.edu	37	3	184910795	184910795	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001966.3	-1	reviewed	p.K464T	1.000	181	0%	232	35.8%	0	-	unknown(0)	deleterious(0)	-	HMMPfam_3HCDH_N,superfamily_NAD(P)-bd
MAP3K13	9175	genome.wustl.edu	37	3	185146804	185146804	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004721.3	+1	reviewed	p.I145	1.000	175	0%	325	32.9%	1	0%	-	-	-	NULL
LIPH	200879	genome.wustl.edu	37	3	185252652	185252652	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139248.2	-1	reviewed	p.V106	0.987	140	0%	275	26.9%	0	-	-	-	-	HMMPfam_Lipase,superfamily_SSF53474
SENP2	59343	genome.wustl.edu	37	3	185327066	185327066	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021627.2	+1	validated	p.R217Q	0.001	124	0%	225	29.8%	9	55.5%	benign(0.001)	tolerated(0.12)	neutral(0.261)	NULL
TRA2B	6434	genome.wustl.edu	37	3	185643274	185643274	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004593.2	-1	validated	p.R104H	1.000	150	0%	220	31.8%	120	41.6%	unknown(0)	deleterious(0.02)	-	superfamily_RNA-binding domain RBD
AHSG	197	genome.wustl.edu	37	3	186331026	186331026	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001622.2	+1	reviewed	p.C32	0.996	109	0%	137	33.6%	0	-	-	-	-	HMMSmart_SM00043,PatternScan_FETUIN_1,superfamily_Cystatin/monellin
FETUB	26998	genome.wustl.edu	37	3	186358248	186358248	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000450521	+1	known	e1-1	0.988	72	0%	63	38.1%	0	-	-	-	-	-
HRG	3273	genome.wustl.edu	37	3	186389534	186389534	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000412.2	+1	reviewed	p.F172V	0.597	139	0%	205	27.3%	0	-	possibly_damaging(0.563)	tolerated(0.48)	neutral(0.203)	HMMSmart_SM00043,superfamily_Cystatin/monellin
MASP1	5648	genome.wustl.edu	37	3	186953583	186953583	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139125.3	-1	reviewed	p.C692	1.000	133	0%	143	35%	8	0%	-	-	-	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
MASP1	5648	genome.wustl.edu	37	3	187003856	187003856	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000392475	-1	known	p.F5L	0.012	35	0%	52	36.5%	0	-	benign(0)	deleterious(0)	neutral(0.445)	NULL
RTP2	344892	genome.wustl.edu	37	3	187419770	187419770	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004312.2	-1	validated	p.E49D	0.995	73	0%	95	29.5%	0	-	probably_damaging(0.987)	tolerated(0.11)	deleterious(0.708)	NULL
LPP	4026	genome.wustl.edu	37	3	188202382	188202382	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005578.3	+1	reviewed	p.D66N	1.000	373	0%	499	30.1%	4	25%	benign(0.139)	tolerated(0.21)	neutral(0.056)	NULL
TP63	8626	genome.wustl.edu	37	3	189587156	189587156	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003722.4	+1	reviewed	p.K391N	1.000	195	0%	220	35%	3	33.3%	probably_damaging(0.986)	tolerated(0.06)	deleterious(0.757)	HMMPfam_P53_tetramer
TP63	8626	genome.wustl.edu	37	3	189612028	189612028	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003722.4	+1	reviewed	p.R594*	1.000	160	0%	176	33%	3	66.6%	-	-	-	HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2
LEPREL1	55214	genome.wustl.edu	37	3	189706741	189706741	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018192.3	-1	validated	p.F304V	1.000	142	0%	244	32.4%	1	0%	possibly_damaging(0.466)	deleterious(0)	deleterious(0.598)	superfamily_TPR-like
LEPREL1	55214	genome.wustl.edu	37	3	189711931	189711931	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018192.3	-1	validated	p.E259*	1.000	146	0%	165	30.9%	6	0%	-	-	-	superfamily_TPR-like
LEPREL1	55214	genome.wustl.edu	37	3	189713220	189713220	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018192.3	-1	validated	p.L164	0.996	156	0%	195	31.8%	1	0%	-	-	-	superfamily_TPR-like
CCDC50	152137	genome.wustl.edu	37	3	191098622	191098622	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178335.2	+1	reviewed	p.I381	0.993	263	0%	160	37.5%	23	30.4%	-	-	-	NULL
FGF12	2257	genome.wustl.edu	37	3	192053206	192053206	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021032.3	-1	reviewed	p.G120*	1.000	90	0%	51	54.9%	7	28.5%	-	-	-	HMMPfam_FGF,HMMSmart_SM00442,superfamily_Cytokine
HRASLS	57110	genome.wustl.edu	37	3	192980900	192980900	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020386.3	+1	validated	p.P94L	0.998	189	0%	229	32.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_NC
ATP13A5	344905	genome.wustl.edu	37	3	193036799	193036799	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198505.2	-1	provisional	p.E672*	0.984	120	0%	122	23%	0	-	-	-	-	superfamily_SSF81660,superfamily_SSF81665
ATP13A4	84239	genome.wustl.edu	37	3	193183941	193183941	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032279.2	-1	validated	p.R382I	1.000	110	0%	185	30.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_Calcium ATPase transmembrane domain M
OPA1	4976	genome.wustl.edu	37	3	193364965	193364965	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130837.2	+1	reviewed	p.F622L	1.000	167	0%	180	29.4%	6	50%	possibly_damaging(0.889)	tolerated(0.18)	neutral(0.405)	superfamily_P-loop containing nucleoside triphosphate hydrolases
OPA1	4976	genome.wustl.edu	37	3	193376775	193376775	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130837.2	+1	reviewed	p.L811F	0.999	230	0%	250	37.2%	13	46.1%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
LRRC15	131578	genome.wustl.edu	37	3	194080534	194080534	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135057.2	-1	validated	p.G419	0.000	110	0%	174	39.7%	2	0%	-	-	-	superfamily_L domain-like
ATP13A3	79572	genome.wustl.edu	37	3	194146200	194146200	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024524.3	-1	validated	p.E1062K	0.009	155	0%	146	31.5%	8	25%	benign(0.003)	tolerated(0.9)	-	superfamily_Calcium ATPase transmembrane domain M
PPP1R2	5504	genome.wustl.edu	37	3	195243710	195243710	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006241.4	-1	validated	p.K201T	1.000	270	0%	418	32.1%	27	40.7%	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
LOC651714	651714	genome.wustl.edu	37	3	195345691	195345691	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_078298.1	+1	model	NULL	0.060	102	0%	209	17.7%	1	0%	benign(0.035)	tolerated(0.23)	neutral(0.044)	-
MUC4	4585	genome.wustl.edu	37	3	195511748	195511748	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018406.5	-1	reviewed	p.T2235A	0.134	305	0%	1347	10.2%	0	-	benign(0.389)	-	-	NULL
MUC4	4585	genome.wustl.edu	37	3	195518349	195518349	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018406.5	-1	reviewed	p.L34F	0.000	279	0%	556	36.5%	0	-	possibly_damaging(0.901)	deleterious(0.04)	deleterious(0.706)	NULL
RNF168	165918	genome.wustl.edu	37	3	196199137	196199137	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152617.2	-1	provisional	p.I423	0.000	194	0%	405	31.9%	9	22.2%	-	-	-	NULL
LRRC33	375387	genome.wustl.edu	37	3	196387368	196387368	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198565.1	+1	provisional	p.G285V	1.000	51	0%	100	31%	1	0%	probably_damaging(0.959)	tolerated(0.06)	deleterious(0.725)	NULL
PAK2	5062	genome.wustl.edu	37	3	196533551	196533551	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002577.4	+1	reviewed	p.T190	0.992	99	0%	254	31.1%	10	40%	-	-	-	NULL
PAK2	5062	genome.wustl.edu	37	3	196539673	196539673	+	Silent	SNP	C	C	T	rs56386946		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002577.4	+1	reviewed	p.L296	1.000	105	0%	266	30.5%	17	47%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
MFI2	4241	genome.wustl.edu	37	3	196736574	196736574	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005929.4	-1	reviewed	p.F480	0.000	33	0%	34	38.2%	1	0%	-	-	-	HMMPfam_Transferrin,HMMSmart_SM00094,superfamily_Periplasmic binding protein-like II
MFI2	4241	genome.wustl.edu	37	3	196744120	196744120	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005929.4	-1	reviewed	p.D252Y	0.998	23	0%	25	32%	0	-	possibly_damaging(0.54)	tolerated(0.15)	neutral(0.424)	HMMPfam_Transferrin,HMMSmart_SM00094,PatternScan_TRANSFERRIN_3,superfamily_Periplasmic binding protein-like II
DLG1	1739	genome.wustl.edu	37	3	196842808	196842808	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004087.2	-1	validated	p.R511H	0.992	155	0%	178	36.5%	11	36.3%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
FYTTD1	84248	genome.wustl.edu	37	3	197483318	197483318	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032288.6	+1	validated	p.R42Q	1.000	142	0%	271	32.5%	11	27.2%	possibly_damaging(0.79)	deleterious(0.05)	deleterious(0.642)	HMMPfam_FYTT
LRCH3	84859	genome.wustl.edu	37	3	197574755	197574755	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032773.2	+1	provisional	p.D465Y	0.978	84	0%	146	36.3%	14	64.2%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_SSF52058
LRCH3	84859	genome.wustl.edu	37	3	197598199	197598199	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032773.2	+1	provisional	p.I666V	1.000	179	0%	403	26.1%	15	53.3%	possibly_damaging(0.935)	tolerated(0.09)	deleterious(0.677)	superfamily_Calponin-homology
IQCG	84223	genome.wustl.edu	37	3	197665622	197665622	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134435.1	-1	validated	p.T104	0.000	213	0%	448	37.3%	7	28.5%	-	-	-	NULL
LMLN	89782	genome.wustl.edu	37	3	197751533	197751533	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136049.2	+1	reviewed	p.I547M	0.031	158	0%	249	36.5%	3	100%	benign(0.004)	tolerated(0.11)	neutral(0.272)	"HMMPfam_Peptidase_M8,superfamily_Metalloproteases (""zincins"") catalytic domain"
ZNF732	654254	genome.wustl.edu	37	4	264979	264979	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001137608.1	-1	provisional	p.K556T	0.005	136	0%	155	31%	0	-	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	superfamily_SSF57667
ENSG00000186777	0	genome.wustl.edu	37	4	265417	265417	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000341087	-1	known	p.E87*	0.601	149	0%	188	39.4%	0	-	benign(0.062)	tolerated(0.27)	neutral(0.038)	superfamily_C2H2 and C2HC zinc fingers
ZNF141	7700	genome.wustl.edu	37	4	367016	367016	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000240499	+1	known	p.F264V	0.995	72	0%	96	34.4%	1	0%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF721	170960	genome.wustl.edu	37	4	437198	437198	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133474.2	-1	validated	p.R353I	0.219	208	0%	296	36.8%	1	0%	benign(0.16)	tolerated(0.2)	neutral(0.064)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF721	170960	genome.wustl.edu	37	4	437591	437591	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133474.2	-1	validated	p.K222T	0.000	195	0.5%	231	31.2%	0	-	possibly_damaging(0.938)	deleterious(0.05)	deleterious(0.729)	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SLC26A1	10861	genome.wustl.edu	37	4	983411	983411	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022042.2	-1	reviewed	p.R439Q	0.918	11	0%	11	36.4%	1	0%	possibly_damaging(0.706)	tolerated(0.51)	neutral(0.263)	HMMPfam_Sulfate_transp
IDUA	3425	genome.wustl.edu	37	4	994704	994704	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000504568	+1	known	p.S127*	1.000	138	0%	183	31.7%	7	14.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Glyco_hydro_39,superfamily_(Trans)glycosidases
TACC3	10460	genome.wustl.edu	37	4	1725222	1725222	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006342.1	+1	reviewed	p.S25L	0.021	75	0%	145	32.4%	32	37.5%	benign(0.349)	tolerated(0.13)	neutral(0.363)	NULL
WHSC1	7468	genome.wustl.edu	37	4	1902610	1902610	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042424.2	+1	reviewed	p.D77N	0.996	49	0%	96	33.3%	15	40%	benign(0)	deleterious(0.01)	neutral(0.406)	NULL
POLN	353497	genome.wustl.edu	37	4	2097609	2097609	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181808.2	-1	validated	p.K678N	1.000	227	0%	292	35.6%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DNA_pol_A,HMMSmart_SM00482,superfamily_DNA/RNA polymerases
POLN	353497	genome.wustl.edu	37	4	2129919	2129919	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181808.2	-1	validated	p.L635V	1.000	176	0%	255	32.5%	1	100%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	HMMPfam_DNA_pol_A,HMMSmart_SM00482,superfamily_DNA/RNA polymerases
ZFYVE28	57732	genome.wustl.edu	37	4	2274921	2274921	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020972.2	-1	validated	p.D768N	1.000	200	0%	330	32.4%	1	0%	probably_damaging(0.989)	tolerated(0.05)	deleterious(0.785)	NULL
FAM193A	8603	genome.wustl.edu	37	4	2701544	2701544	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003704.3	+1	validated	p.L924	0.979	51	0%	65	32.3%	16	37.5%	-	-	-	NULL
GRK4	2868	genome.wustl.edu	37	4	3029698	3029698	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182982.2	+1	reviewed	p.R344*	0.994	200	0%	413	32%	4	50%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
HTT	3064	genome.wustl.edu	37	4	3109047	3109047	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002111.6	+1	reviewed	p.R215Q	0.996	114	0%	188	33.5%	6	66.6%	probably_damaging(1)	tolerated(0.19)	deleterious(0.549)	superfamily_ARM repeat
HTT	3064	genome.wustl.edu	37	4	3180052	3180052	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002111.6	+1	reviewed	p.I1497	1.000	224	0%	395	32.7%	5	20%	-	-	-	superfamily_ARM repeat
HTT	3064	genome.wustl.edu	37	4	3208244	3208244	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002111.6	+1	reviewed	p.E1914K	1.000	84	0%	117	27.4%	20	60%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
HTT	3064	genome.wustl.edu	37	4	3235075	3235075	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002111.6	+1	reviewed	p.I2817	0.002	14	0%	20	40%	61	40.9%	-	-	-	NULL
DOK7	285489	genome.wustl.edu	37	4	3475167	3475167	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173660.4	+1	reviewed	p.S45	0.133	19	0%	30	40%	2	100%	-	-	-	HMMSmart_SM00233,superfamily_PH domain-like
ADRA2C	152	genome.wustl.edu	37	4	3768667	3768667	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000683.3	+1	reviewed	p.E112K	1.000	62	0%	80	30%	62	12.9%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OTOP1	133060	genome.wustl.edu	37	4	4199535	4199535	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177998.1	-1	provisional	p.K342	0.999	85	0%	119	26.9%	0	-	-	-	-	HMMPfam_DUF270
ZBTB49	166793	genome.wustl.edu	37	4	4303733	4303733	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145291.3	+1	validated	p.S57Y	1.000	73	0%	97	35.1%	2	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
STK32B	55351	genome.wustl.edu	37	4	5448455	5448455	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018401.1	+1	provisional	p.V206	0.826	48	0%	68	35.3%	3	33.3%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
EVC2	132884	genome.wustl.edu	37	4	5690897	5690897	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_147127.4	-1	reviewed	p.K231N	0.529	103	0%	105	12.4%	1	0%	probably_damaging(0.991)	tolerated(0.12)	deleterious(0.705)	NULL
JAKMIP1	152789	genome.wustl.edu	37	4	6043910	6043910	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099433.1	-1	validated	p.K691	1.000	295	0%	479	33.8%	0	-	-	-	-	NULL
JAKMIP1	152789	genome.wustl.edu	37	4	6066641	6066641	+	Missense_Mutation	SNP	C	C	T	rs35130879		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099433.1	-1	validated	p.R466K	1.000	355	0%	384	25.8%	0	-	possibly_damaging(0.775)	tolerated(0.57)	neutral(0.294)	NULL
JAKMIP1	152789	genome.wustl.edu	37	4	6087218	6087218	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099433.1	-1	validated	p.R255W	0.999	113	0%	132	29.5%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
WFS1	7466	genome.wustl.edu	37	4	6279277	6279277	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006005.3	+1	reviewed	p.S32L	0.653	13	0%	10	50%	12	66.6%	benign(0.054)	tolerated(0.12)	neutral(0.264)	NULL
MAN2B2	23324	genome.wustl.edu	37	4	6611548	6611548	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015274.1	+1	validated	p.T677M	0.000	37	0%	82	29.3%	34	41.1%	probably_damaging(0.98)	tolerated(0.16)	deleterious(0.483)	superfamily_Galactose mutarotase-like,HMMPfam_Glyco_hydro_38C
KIAA0232	9778	genome.wustl.edu	37	4	6862905	6862905	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100590.1	+1	validated	p.E266*	1.000	83	0%	150	29.3%	3	33.3%	-	-	-	NULL
KIAA0232	9778	genome.wustl.edu	37	4	6863223	6863223	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100590.1	+1	validated	p.E372*	1.000	63	0%	65	23.1%	5	60%	-	-	-	NULL
TBC1D14	57533	genome.wustl.edu	37	4	7026977	7026977	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113361.1	+1	validated	p.K668N	1.000	80	0%	129	33.3%	32	43.7%	benign(0.424)	deleterious(0.02)	deleterious(0.520)	NULL
SORCS2	57537	genome.wustl.edu	37	4	7398045	7398045	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020777.2	+1	reviewed	p.A171T	0.958	216	0.5%	339	32.4%	0	-	benign(0.004)	tolerated(0.53)	neutral(0.007)	HMMSmart_SM00602,superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase
PSAPL1	768239	genome.wustl.edu	37	4	7435932	7435932	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001085382.1	-1	validated	p.K225N	0.899	43	0%	49	34.7%	0	-	possibly_damaging(0.944)	deleterious(0)	deleterious(0.833)	HMMSmart_SapB,superfamily_Saposin_like
SORCS2	57537	genome.wustl.edu	37	4	7668893	7668893	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020777.2	+1	reviewed	p.R372*	0.972	244	0%	291	29.2%	0	-	-	-	-	HMMSmart_SM00602,superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase
SORCS2	57537	genome.wustl.edu	37	4	7677878	7677878	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000507866	+1	known	p.R388C	0.008	33	0%	34	52.9%	0	-	-	-	-	HMMSmart_SM00602,superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase
SORCS2	57537	genome.wustl.edu	37	4	7714542	7714542	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020777.2	+1	reviewed	p.E651K	0.856	53	0%	113	33.6%	0	-	benign(0.344)	tolerated(0.21)	neutral(0.152)	HMMSmart_SM00602
AFAP1	60312	genome.wustl.edu	37	4	7802370	7802370	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134647.1	-1	reviewed	p.N355	1.000	96	0%	120	30.8%	5	0%	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
SH3TC1	54436	genome.wustl.edu	37	4	8237240	8237240	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018986.3	+1	validated	p.F1121	1.000	128	0%	195	40.5%	8	0%	-	-	-	superfamily_TPR-like
ACOX3	8310	genome.wustl.edu	37	4	8417630	8417630	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003501.2	-1	validated	p.R81*	0.988	55	0%	95	36.8%	5	40%	-	-	-	superfamily_Acyl-CoA dehydrogenase NM domain-like
LOC650293	650293	genome.wustl.edu	37	4	8952058	8952058	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040071.1	+1	provisional	p.R194S	0.045	248	0%	338	38.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
ENSG00000219492	0	genome.wustl.edu	37	4	9386221	9386221	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000508324	-1	known	p.K141N	1.000	161	0%	166	35.5%	0	-	possibly_damaging(0.918)	deleterious(0.02)	deleterious(0.752)	superfamily_C2H2 and C2HC zinc fingers
ENSG00000219492	0	genome.wustl.edu	37	4	9386323	9386323	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000508324	-1	known	p.E107D	0.649	192	0%	163	23.9%	0	-	benign(0.014)	tolerated(0.09)	neutral(0.297)	NULL
DEFB131	644414	genome.wustl.edu	37	4	9452221	9452221	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040448.2	+1	validated	p.D65G	0.001	108	0%	145	26.2%	0	-	benign(0.016)	tolerated(0.48)	neutral(0.011)	NULL
ZNF518B	85460	genome.wustl.edu	37	4	10445435	10445435	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053042.2	-1	validated	p.E840K	0.008	156	0%	165	28.5%	6	33.3%	benign(0.026)	deleterious(0)	neutral(0.446)	NULL
ZNF518B	85460	genome.wustl.edu	37	4	10446965	10446965	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053042.2	-1	validated	p.T330P	0.995	156	0%	203	35%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HS3ST1	9957	genome.wustl.edu	37	4	11400742	11400742	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005114.2	-1	reviewed	p.F296L	1.000	81	0%	94	39.4%	18	33.3%	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
BOD1L	259282	genome.wustl.edu	37	4	13578576	13578576	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148894.2	-1	validated	p.S2975Y	0.998	315	0%	410	31.7%	20	35%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
BOD1L	259282	genome.wustl.edu	37	4	13584298	13584298	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148894.2	-1	validated	p.T2832	0.000	288	0%	385	27%	11	36.3%	-	-	-	NULL
BOD1L	259282	genome.wustl.edu	37	4	13602500	13602500	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148894.2	-1	validated	p.Y2008	0.035	156	0%	329	36.8%	8	62.5%	-	-	-	superfamily_SSF81995
BOD1L	259282	genome.wustl.edu	37	4	13606162	13606162	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148894.2	-1	validated	p.E788K	1.000	380	0%	427	30.7%	1	0%	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	superfamily_SSF81995
CC2D2A	57545	genome.wustl.edu	37	4	15554924	15554924	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080522.2	+1	reviewed	p.R828W	0.004	109	0%	138	31.9%	0	-	probably_damaging(0.982)	deleterious(0.02)	deleterious(0.809)	NULL
CC2D2A	57545	genome.wustl.edu	37	4	15562175	15562175	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080522.2	+1	reviewed	p.R982C	1.000	119	0%	100	22%	1	100%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
CC2D2A	57545	genome.wustl.edu	37	4	15601207	15601207	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080522.2	+1	reviewed	p.R1518W	0.956	96	1%	125	27.2%	5	60%	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	NULL
FBXL5	26234	genome.wustl.edu	37	4	15627353	15627353	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012161.2	-1	reviewed	p.E458*	1.000	183	0%	377	30.2%	28	17.8%	-	-	-	superfamily_RNI-like
FBXL5	26234	genome.wustl.edu	37	4	15627543	15627543	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000513163	-1	known	p.E315K	0.998	32	0%	42	31%	11	9%	-	-	-	HMMPfam_LRR_1,HMMSmart_SM00367,superfamily_RNI-like
PROM1	8842	genome.wustl.edu	37	4	16010606	16010606	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006017.2	-1	reviewed	p.N423H	0.000	129	0%	231	35.5%	6	16.6%	benign(0)	tolerated(0.5)	neutral(0.010)	HMMPfam_Prominin
PROM1	8842	genome.wustl.edu	37	4	16037372	16037372	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006017.2	-1	reviewed	p.I97L	0.767	194	0%	288	41.3%	0	-	benign(0)	tolerated(0.12)	neutral(0.261)	HMMPfam_Prominin
TAPT1	202018	genome.wustl.edu	37	4	16165010	16165010	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153365.2	-1	reviewed	p.S542Y	0.300	311	0%	407	36.6%	21	52.3%	possibly_damaging(0.684)	deleterious(0)	deleterious(0.689)	NULL
LAP3	51056	genome.wustl.edu	37	4	17581474	17581474	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015907.2	+1	validated	p.E44*	1.000	346	0%	531	30.9%	12	8.3%	-	-	-	HMMPfam_Peptidase_M17_N,superfamily_Macro domain-like
LAP3	51056	genome.wustl.edu	37	4	17597154	17597154	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015907.2	+1	validated	p.I329L	0.460	94	0%	193	31.6%	35	14.2%	benign(0.038)	tolerated(0.43)	neutral(0.015)	HMMPfam_Peptidase_M17,superfamily_Zn-dependent exopeptidases
LAP3	51056	genome.wustl.edu	37	4	17608497	17608497	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015907.2	+1	validated	p.E436K	1.000	164	0%	337	28.5%	50	24%	benign(0)	tolerated(0.47)	neutral(0.011)	HMMPfam_Peptidase_M17,superfamily_Zn-dependent exopeptidases
LAP3	51056	genome.wustl.edu	37	4	17609065	17609065	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015907.2	+1	validated	p.F471	0.999	128	0.8%	216	34.7%	75	38.6%	-	-	-	HMMPfam_Peptidase_M17,superfamily_Zn-dependent exopeptidases
NCAPG	64151	genome.wustl.edu	37	4	17827032	17827032	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022346.3	+1	validated	p.E501K	1.000	61	0%	62	27.4%	6	33.3%	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	superfamily_ARM-type_fold
LCORL	254251	genome.wustl.edu	37	4	17963534	17963534	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153686.7	-1	reviewed	p.R141Q	1.000	266	0.4%	138	34.1%	4	50%	possibly_damaging(0.454)	deleterious(0.04)	deleterious(0.497)	NULL
SLIT2	9353	genome.wustl.edu	37	4	20525762	20525762	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004787.1	+1	provisional	p.R467I	1.000	133	0%	123	34.1%	1	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_LRRCT,HMMSmart_SM00082,superfamily_L domain-like
GPR125	166647	genome.wustl.edu	37	4	22394252	22394252	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145290.2	-1	validated	p.R848Q	1.000	500	0%	556	33.3%	26	34.6%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_7tm_2
GPR125	166647	genome.wustl.edu	37	4	22438145	22438145	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145290.2	-1	validated	p.R402I	0.932	267	0%	263	27.4%	12	41.6%	possibly_damaging(0.935)	tolerated(0.08)	deleterious(0.680)	superfamily_Hormone receptor domain (HRM Pfam 02793),superfamily_Immunoglobulin
GPR125	166647	genome.wustl.edu	37	4	22449096	22449096	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145290.2	-1	validated	p.G171V	1.000	71	0%	59	32.2%	9	22.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like
GBA3	57733	genome.wustl.edu	37	4	22749413	22749413	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020973.3	+1	validated	p.D261N	0.991	151	0%	160	30.6%	0	-	possibly_damaging(0.835)	tolerated(0.83)	neutral(0.319)	HMMPfam_Glyco_hydro_1,superfamily_(Trans)glycosidases
CCDC149	91050	genome.wustl.edu	37	4	24839827	24839827	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130726.1	-1	validated	p.A147V	1.000	152	0%	163	28.2%	7	42.8%	benign(0.167)	tolerated(0.18)	neutral(0.071)	HMMPfam_DUF2353
ZCCHC4	29063	genome.wustl.edu	37	4	25315691	25315691	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024936.2	+1	validated	p.V51L	0.993	117	0%	185	34.1%	6	66.6%	benign(0.291)	tolerated(0.28)	neutral(0.121)	HMMPfam_zf-GRF
ANAPC4	29945	genome.wustl.edu	37	4	25390470	25390470	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013367.2	+1	reviewed	p.S161P	1.000	164	0%	162	40.1%	3	66.6%	possibly_damaging(0.924)	tolerated(0.05)	deleterious(0.718)	NULL
SEL1L3	23231	genome.wustl.edu	37	4	25806175	25806175	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015187.3	-1	validated	p.R588	0.991	125	0%	165	36.4%	90	41.1%	-	-	-	HMMSmart_SM00671,superfamily_HCP-like
RBPJ	3516	genome.wustl.edu	37	4	26407862	26407862	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005349.2	+1	validated	p.V55A	1.000	214	0%	264	32.6%	13	30.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_p53-like transcription factors,HMMPfam_LAG1-DNAbind
CCKAR	886	genome.wustl.edu	37	4	26484811	26484811	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000730.2	-1	reviewed	p.K241Q	1.000	187	0%	258	36.4%	0	-	benign(0.003)	tolerated(0.29)	neutral(0.029)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
PCDH7	5099	genome.wustl.edu	37	4	30725911	30725911	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032457.3	+1	reviewed	p.A909D	1.000	136	0%	273	37%	29	51.7%	possibly_damaging(0.897)	tolerated(0.47)	neutral(0.365)	HMMPfam_Protocadherin
PCDH7	5099	genome.wustl.edu	37	4	31144301	31144301	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032457.3	+1	reviewed	p.R1145C	1.000	120	0%	97	28.9%	3	33.3%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
ARAP2	116984	genome.wustl.edu	37	4	36134862	36134862	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015230.2	-1	reviewed	p.F1138C	1.000	236	0%	198	31.8%	1	0%	possibly_damaging(0.926)	deleterious(0)	deleterious(0.819)	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
ARAP2	116984	genome.wustl.edu	37	4	36212317	36212317	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015230.2	-1	reviewed	p.D394	1.000	214	0%	135	32.6%	0	-	-	-	-	NULL
ARAP2	116984	genome.wustl.edu	37	4	36230520	36230520	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015230.2	-1	reviewed	p.E197*	0.000	112	0%	107	34.6%	1	100%	-	-	-	NULL
DTHD1	401124	genome.wustl.edu	37	4	36285827	36285827	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000456874	+1	known	p.E162D	0.679	108	0%	151	35.8%	0	-	benign(0.077)	tolerated(0.69)	neutral(0.007)	NULL
DTHD1	401124	genome.wustl.edu	37	4	36317926	36317926	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136536.3	+1	validated	p.L430M	0.997	134	0%	180	37.2%	1	0%	probably_damaging(0.989)	tolerated(0.13)	deleterious(0.692)	NULL
KIAA1239	57495	genome.wustl.edu	37	4	37448088	37448088	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144990.1	+1	validated	p.I1493S	1.000	113	0%	140	36.4%	0	-	benign(0.037)	tolerated(0.09)	neutral(0.298)	superfamily_WD40_like
TLR10	81793	genome.wustl.edu	37	4	38776255	38776255	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017388.1	-1	reviewed	p.I319	0.283	168	0%	211	26.1%	0	-	-	-	-	superfamily_SSF52058
TLR10	81793	genome.wustl.edu	37	4	38776478	38776478	+	Missense_Mutation	SNP	G	G	A	rs187892716	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017388.1	-1	reviewed	p.S245L	0.178	119	0%	143	42%	0	-	probably_damaging(0.998)	deleterious(0.05)	deleterious(0.820)	superfamily_SSF52058
TLR10	81793	genome.wustl.edu	37	4	38776964	38776964	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017388.1	-1	reviewed	p.R83K	0.093	139	0%	140	32.9%	0	-	benign(0.059)	tolerated(0.55)	neutral(0.011)	superfamily_SSF52058
TLR10	81793	genome.wustl.edu	37	4	38777079	38777079	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017388.1	-1	reviewed	p.D45Y	0.038	191	0%	167	37.7%	0	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	superfamily_SSF52058
TLR1	7096	genome.wustl.edu	37	4	38798100	38798100	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003263.3	-1	reviewed	p.K785Q	0.004	129	0%	176	32.4%	1	0%	benign(0.282)	tolerated(0.24)	neutral(0.124)	superfamily_Toll/Interleukin receptor TIR domain
TLR1	7096	genome.wustl.edu	37	4	38799487	38799487	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003263.3	-1	reviewed	p.I322	0.793	103	0%	74	28.4%	1	0%	-	-	-	superfamily_L domain-like,superfamily_Outer arm dynein light chain 1
TLR1	7096	genome.wustl.edu	37	4	38800305	38800305	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003263.3	-1	reviewed	p.L50V	0.094	133	0%	163	28.2%	0	-	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	superfamily_L domain-like
TLR6	10333	genome.wustl.edu	37	4	38828723	38828723	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006068.3	-1	validated	p.N791I	0.059	149	0%	193	35.2%	1	0%	probably_damaging(0.974)	deleterious(0.01)	deleterious(0.822)	NULL
TLR6	10333	genome.wustl.edu	37	4	38828760	38828760	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006068.3	-1	validated	p.A779T	1.000	149	0%	210	35.7%	1	0%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_TIR,HMMSmart_TIR,superfamily_TIR
TLR6	10333	genome.wustl.edu	37	4	38828819	38828819	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006068.3	-1	validated	p.T759N	1.000	200	0%	320	38.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_TIR,HMMSmart_TIR,superfamily_TIR
TLR6	10333	genome.wustl.edu	37	4	38829330	38829330	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006068.3	-1	validated	p.V589I	0.012	167	0%	264	34.8%	0	-	benign(0.004)	tolerated(0.19)	neutral(0.050)	NULL
TLR6	10333	genome.wustl.edu	37	4	38829480	38829480	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006068.3	-1	validated	p.E539*	0.555	353	0%	532	36.8%	0	-	-	-	-	HMMSmart_LRRCT,superfamily_SSF52058
FAM114A1	92689	genome.wustl.edu	37	4	38910327	38910327	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138389.2	+1	validated	p.R258G	1.000	88	0%	152	33.6%	19	26.3%	probably_damaging(0.998)	tolerated(0.15)	deleterious(0.716)	HMMPfam_DUF719
TMEM156	80008	genome.wustl.edu	37	4	38988037	38988037	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024943.1	-1	provisional	p.H248N	0.998	131	0%	185	32.4%	0	-	possibly_damaging(0.829)	deleterious(0)	deleterious(0.759)	NULL
TMEM156	80008	genome.wustl.edu	37	4	38990533	38990533	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024943.1	-1	provisional	p.F226C	0.017	197	0%	263	40.3%	0	-	possibly_damaging(0.519)	deleterious(0.02)	deleterious(0.557)	NULL
WDR19	57728	genome.wustl.edu	37	4	39188187	39188187	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025132.3	+1	reviewed	p.R43C	1.000	90	0%	82	22%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_WD40 repeat-like
WDR19	57728	genome.wustl.edu	37	4	39219611	39219611	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000506503	+1	known	p.A454V	1.000	213	0%	226	29.6%	7	28.5%	benign(0.068)	tolerated(0.06)	neutral(0.327)	NULL
RFC1	5981	genome.wustl.edu	37	4	39322970	39322970	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002913.3	-1	reviewed	p.E249*	0.990	319	0%	483	30%	5	0%	-	-	-	NULL
RFC1	5981	genome.wustl.edu	37	4	39329319	39329319	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002913.3	-1	reviewed	p.R130I	0.047	289	0%	429	32.4%	4	75%	benign(0.009)	tolerated(0.42)	neutral(0.015)	NULL
LIAS	11019	genome.wustl.edu	37	4	39466781	39466781	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006859.2	+1	reviewed	p.W170L	1.000	226	0%	463	27.4%	3	33.3%	possibly_damaging(0.533)	tolerated(0.31)	neutral(0.207)	HMMSmart_Elp3,HMMPfam_Radical_SAM,superfamily_SSF102114
UBE2K	3093	genome.wustl.edu	37	4	39779984	39779984	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005339.4	+1	reviewed	p.A178V	1.000	276	0%	433	27.7%	125	42.4%	possibly_damaging(0.775)	tolerated(0.07)	deleterious(0.607)	HMMPfam_UBA,superfamily_UBA-like,HMMSmart_SM00165
PDS5A	23244	genome.wustl.edu	37	4	39899994	39899994	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100400.1	-1	reviewed	p.Y595*	0.001	96	0%	97	26.8%	11	45.4%	-	-	-	NULL
NSUN7	79730	genome.wustl.edu	37	4	40752619	40752619	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024677.4	+1	validated	e1-1	0.991	26	0%	41	31.7%	3	100%	-	-	-	-
APBB2	323	genome.wustl.edu	37	4	40825734	40825734	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173075.4	-1	reviewed	p.S597*	1.000	111	0%	168	25%	4	50%	-	-	-	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like
LIMCH1	22998	genome.wustl.edu	37	4	41621241	41621241	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014988.2	+1	validated	p.R240Q	1.000	47	0%	58	27.6%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LIMCH1	22998	genome.wustl.edu	37	4	41621302	41621302	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000508466	+1	known	p.R95Q	0.228	53	0%	69	24.6%	1	100%	-	-	-	NULL
LIMCH1	22998	genome.wustl.edu	37	4	41652581	41652581	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014988.2	+1	validated	p.E613K	0.986	144	0%	215	30.2%	3	0%	benign(0.12)	tolerated(0.14)	neutral(0.259)	NULL
PHOX2B	8929	genome.wustl.edu	37	4	41748256	41748256	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000510424	-1	known	p.P111H	0.058	52	0%	53	28.3%	0	-	-	-	-	NULL
DCAF4L1	285429	genome.wustl.edu	37	4	41984589	41984589	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029955.3	+1	validated	p.K260N	0.978	177	0%	197	32.5%	0	-	benign(0.051)	tolerated(0.15)	neutral(0.244)	HMMSmart_SM00320,superfamily_WD40 repeat-like
ATP8A1	10396	genome.wustl.edu	37	4	42545992	42545992	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006095.2	-1	reviewed	p.R555I	1.000	140	0%	144	30.6%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N
KCTD8	386617	genome.wustl.edu	37	4	44449766	44449766	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198353.2	-1	validated	p.D259N	1.000	34	0%	47	31.9%	0	-	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	NULL
GUF1	60558	genome.wustl.edu	37	4	44696439	44696439	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021927.2	+1	validated	p.E542K	1.000	191	0%	179	27.9%	12	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_EFG_C,superfamily_EFG_III_V
GABRA2	2555	genome.wustl.edu	37	4	46252487	46252487	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000807.2	-1	reviewed	p.K398N	1.000	322	0%	113	23.9%	0	-	benign(0.045)	tolerated(0.38)	neutral(0.020)	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore
GABRA4	2557	genome.wustl.edu	37	4	46930528	46930528	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000809.2	-1	reviewed	p.R460Q	0.001	166	0%	86	73.3%	0	-	benign(0)	tolerated(0.32)	neutral(0.024)	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
GABRA4	2557	genome.wustl.edu	37	4	46930675	46930675	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000809.2	-1	reviewed	p.S411I	0.000	90	0%	47	29.8%	0	-	benign(0)	tolerated(0.14)	neutral(0.249)	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
GABRB1	2560	genome.wustl.edu	37	4	47163449	47163449	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000812.3	+1	reviewed	p.R142*	1.000	216	0%	120	30%	0	-	-	-	-	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD
GABRB1	2560	genome.wustl.edu	37	4	47322179	47322179	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000812.3	+1	reviewed	p.R166Q	1.000	160	0%	249	32.9%	0	-	possibly_damaging(0.916)	deleterious(0.04)	deleterious(0.716)	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL
ATP10D	57205	genome.wustl.edu	37	4	47593132	47593132	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020453.3	+1	validated	p.T1339A	0.003	102	0%	81	37%	8	37.5%	benign(0.001)	tolerated(0.2)	neutral(0.049)	NULL
NFXL1	152518	genome.wustl.edu	37	4	47857086	47857086	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152995.4	-1	validated	p.R804I	1.000	118	0%	72	37.5%	9	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
NFXL1	152518	genome.wustl.edu	37	4	47912883	47912883	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152995.4	-1	validated	p.K122Q	0.910	281	0%	422	31.5%	2	50%	benign(0.054)	tolerated(0.5)	neutral(0.013)	NULL
CNGA1	1259	genome.wustl.edu	37	4	47938735	47938735	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142564.1	-1	reviewed	p.K661N	0.971	98	0%	110	26.4%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_SM00100,superfamily_cAMP-binding domain-like
CNGA1	1259	genome.wustl.edu	37	4	47938832	47938832	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142564.1	-1	reviewed	p.R629Q	1.000	95	0%	120	28.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_cNMP_binding,HMMSmart_SM00100,PatternScan_CNMP_BINDING_2,superfamily_cAMP-binding domain-like
NIPAL1	152519	genome.wustl.edu	37	4	48037778	48037778	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207330.1	+1	provisional	p.P274	0.002	208	0.5%	323	34.7%	1	100%	-	-	-	HMMPfam_DUF803
TEC	7006	genome.wustl.edu	37	4	48230575	48230575	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003215.2	-1	reviewed	p.K19N	1.000	310	0%	417	31.7%	0	-	probably_damaging(0.971)	tolerated(0.06)	deleterious(0.736)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
ZAR1	326340	genome.wustl.edu	37	4	48494979	48494979	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175619.1	+1	provisional	p.T361P	1.000	272	0%	437	27.5%	0	-	probably_damaging(0.996)	tolerated(0.05)	deleterious(0.807)	NULL
FRYL	285527	genome.wustl.edu	37	4	48548277	48548277	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015030.1	-1	validated	p.D1696Y	1.000	115	0%	115	34.8%	2	0%	benign(0.372)	deleterious(0.01)	deleterious(0.524)	NULL
FRYL	285527	genome.wustl.edu	37	4	48622744	48622744	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015030.1	-1	validated	p.R76C	1.000	226	0%	312	33.7%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FRYL	285527	genome.wustl.edu	37	4	48636487	48636487	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000505759	-1	known	p.V73I	1.000	176	0%	150	39.3%	1	100%	possibly_damaging(0.484)	deleterious(0)	deleterious(0.605)	NULL
CWH43	80157	genome.wustl.edu	37	4	49032922	49032922	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025087.2	+1	validated	p.E485K	1.000	212	0%	239	32.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LRRC66	339977	genome.wustl.edu	37	4	52883746	52883746	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024611.1	-1	provisional	p.V12F	0.000	33	0%	34	23.5%	0	-	possibly_damaging(0.898)	deleterious(0)	deleterious(0.799)	NULL
SGCB	6443	genome.wustl.edu	37	4	52890195	52890195	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000232.4	-1	reviewed	p.L295	1.000	122	0%	158	32.9%	22	31.8%	-	-	-	HMMPfam_Sarcoglycan_1
SGCB	6443	genome.wustl.edu	37	4	52899799	52899799	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000232.4	-1	reviewed	p.S14F	1.000	258	0%	388	35.8%	9	22.2%	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	NULL
LOC100288413	100288413	genome.wustl.edu	37	4	53610235	53610235	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342451.1	-1	model	p.D485Y	0.000	157	0%	299	29.8%	4	75%	-	-	-	NULL
LOC100288413	100288413	genome.wustl.edu	37	4	53610452	53610452	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342451.1	-1	model	p.K412N	0.000	310	0%	476	38.7%	11	54.5%	-	-	-	NULL
FIP1L1	81608	genome.wustl.edu	37	4	54257184	54257184	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030917.3	+1	reviewed	p.L172I	1.000	135	0%	147	25.2%	20	25%	probably_damaging(0.957)	tolerated(0.35)	neutral(0.421)	HMMPfam_Fip1
FIP1L1	81608	genome.wustl.edu	37	4	54310250	54310250	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030917.3	+1	reviewed	p.R422H	1.000	312	0%	318	25.5%	56	50%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	NULL
CHIC2	26511	genome.wustl.edu	37	4	54930447	54930447	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000510894	-1	known	p.L7I	1.000	42	0%	53	32.1%	7	57.1%	-	-	-	NULL
PDGFRA	5156	genome.wustl.edu	37	4	55130019	55130019	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006206.4	+1	reviewed	p.G185W	0.995	105	0%	143	30.1%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00409,superfamily_Immunoglobulin
PDGFRA	5156	genome.wustl.edu	37	4	55131211	55131211	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006206.4	+1	reviewed	p.E252*	0.779	147	0%	198	31.8%	7	0%	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
PDGFRA	5156	genome.wustl.edu	37	4	55133597	55133597	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006206.4	+1	reviewed	p.E301*	0.419	107	0%	112	40.2%	3	0%	-	-	-	HMMSmart_SM00409,superfamily_Immunoglobulin
KIT	3815	genome.wustl.edu	37	4	55561914	55561914	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000222.2	+1	reviewed	p.G102S	0.669	107	0%	110	26.4%	0	-	benign(0)	tolerated(0.29)	neutral(0.029)	superfamily_SSF48726
KIT	3815	genome.wustl.edu	37	4	55593627	55593627	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000222.2	+1	reviewed	p.G565*	1.000	171	0%	152	34.2%	0	-	-	-	-	NULL
KIT	3815	genome.wustl.edu	37	4	55599336	55599336	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000222.2	+1	reviewed	p.S821Y	1.000	176	0%	110	29.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
KDR	3791	genome.wustl.edu	37	4	55948705	55948705	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002253.2	-1	reviewed	p.D1254N	1.000	363	0.3%	310	30.6%	12	0%	possibly_damaging(0.84)	tolerated(0.33)	neutral(0.346)	NULL
KDR	3791	genome.wustl.edu	37	4	55968176	55968176	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002253.2	-1	reviewed	p.G718	0.959	162	0%	120	30.8%	2	0%	-	-	-	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726
KDR	3791	genome.wustl.edu	37	4	55976853	55976853	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002253.2	-1	reviewed	p.K353N	1.000	86	0%	78	37.2%	1	0%	possibly_damaging(0.947)	tolerated(0.1)	deleterious(0.677)	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726
KDR	3791	genome.wustl.edu	37	4	55981208	55981208	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002253.2	-1	reviewed	p.R164I	1.000	131	0%	113	33.6%	2	0%	possibly_damaging(0.91)	deleterious(0.02)	deleterious(0.746)	superfamily_SSF48726
SRD5A3	79644	genome.wustl.edu	37	4	56236191	56236191	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024592.3	+1	validated	p.Q297P	0.988	222	0%	339	32.2%	30	36.6%	possibly_damaging(0.903)	tolerated(0.1)	deleterious(0.644)	HMMPfam_Steroid_dh
EXOC1	55763	genome.wustl.edu	37	4	56759755	56759755	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024924.1	+1	reviewed	p.R588C	1.000	146	0%	233	33.5%	17	23.5%	possibly_damaging(0.847)	tolerated(0.06)	deleterious(0.647)	HMMPfam_Sec3
CEP135	9662	genome.wustl.edu	37	4	56846349	56846349	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025009.3	+1	validated	p.R505I	1.000	141	0%	144	23.6%	1	100%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
CEP135	9662	genome.wustl.edu	37	4	56865778	56865778	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025009.3	+1	validated	p.K749N	1.000	68	0%	131	26%	1	0%	benign(0.045)	tolerated(0.45)	neutral(0.015)	NULL
CEP135	9662	genome.wustl.edu	37	4	56878134	56878134	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025009.3	+1	validated	p.E929*	1.000	44	0%	79	26.6%	1	0%	-	-	-	superfamily_Prefoldin
CEP135	9662	genome.wustl.edu	37	4	56883913	56883913	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025009.3	+1	validated	p.A968T	0.927	67	0%	101	35.6%	4	75%	benign(0.002)	tolerated(0.79)	neutral(0.001)	NULL
CEP135	9662	genome.wustl.edu	37	4	56884001	56884001	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025009.3	+1	validated	p.S997L	0.983	67	0%	80	32.5%	3	66.6%	possibly_damaging(0.659)	tolerated(0.31)	neutral(0.260)	NULL
KIAA1211	57482	genome.wustl.edu	37	4	57181658	57181658	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020722.1	+1	validated	p.A664T	0.202	19	0%	12	41.7%	3	33.3%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
AASDH	132949	genome.wustl.edu	37	4	57244367	57244367	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181806.2	-1	validated	p.P205	0.898	165	0%	300	30.3%	3	33.3%	-	-	-	HMMPfam_AMP-binding,PatternScan_AMP_BINDING,superfamily_Acetyl-CoA synthetase-like
PAICS	10606	genome.wustl.edu	37	4	57325690	57325690	+	Nonsense_Mutation	SNP	G	G	T	rs144785850	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079525.1	+1	reviewed	p.E429*	1.000	66	0%	123	31.7%	123	47.1%	-	-	-	superfamily_N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase PurE)
SRP72	6731	genome.wustl.edu	37	4	57368027	57368027	+	Nonstop_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006947.3	+1	validated	p.*672W	0.981	165	0%	379	33.5%	33	42.4%	-	-	-	NULL
REST	5978	genome.wustl.edu	37	4	57798145	57798145	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005612.3	+1	reviewed	p.E1041*	0.026	71	0%	198	30.8%	12	41.6%	-	-	-	NULL
POLR2B	5431	genome.wustl.edu	37	4	57857059	57857059	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000938.1	+1	reviewed	p.E80*	1.000	104	0%	198	37.9%	10	0%	-	-	-	HMMPfam_RNA_pol_Rpb2_1,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase
POLR2B	5431	genome.wustl.edu	37	4	57865843	57865843	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000938.1	+1	reviewed	p.E266*	1.000	156	0%	313	35.5%	15	6.6%	-	-	-	HMMPfam_RNA_pol_Rpb2_2,HMMPfam_RNA_pol_Rpb2_1,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase
IGFBP7	3490	genome.wustl.edu	37	4	57898608	57898608	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001553.1	-1	provisional	p.E271D	1.000	298	0%	390	29.7%	1211	0.2%	benign(0.022)	tolerated(0.46)	neutral(0.013)	NULL
LPHN3	23284	genome.wustl.edu	37	4	62897279	62897279	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015236.4	+1	reviewed	p.S1113Y	1.000	252	0%	131	27.5%	0	-	possibly_damaging(0.904)	deleterious(0)	deleterious(0.803)	HMMPfam_7tm_2,superfamily_Family A G protein-coupled receptor-like
LOC644578	644578	genome.wustl.edu	37	4	64215801	64215801	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_927694.2	+1	model	p.K150N	0.863	62	0%	92	72.8%	0	-	-	-	-	NULL
LOC644578	644578	genome.wustl.edu	37	4	64216517	64216517	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_927694.2	+1	model	p.E284*	1.000	56	0%	94	63.8%	0	-	-	-	-	"HMMSmart_SM00715,superfamily_""Winged helix"" DNA-binding domain"
TECRL	253017	genome.wustl.edu	37	4	65145856	65145856	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010874.4	-1	validated	p.K342N	0.040	167	0%	84	29.8%	0	-	probably_damaging(0.954)	deleterious(0.03)	deleterious(0.762)	HMMPfam_Steroid_dh
EPHA5	2044	genome.wustl.edu	37	4	66217109	66217109	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004439.5	-1	reviewed	p.R836	0.954	140	0%	92	29.3%	0	-	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
CENPC1	1060	genome.wustl.edu	37	4	68380203	68380203	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001812.2	-1	reviewed	p.K345E	0.648	235	0%	252	33.7%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
STAP1	26228	genome.wustl.edu	37	4	68436846	68436846	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012108.2	+1	reviewed	p.F55L	1.000	180	0%	159	32.1%	1	0%	possibly_damaging(0.78)	deleterious(0.03)	deleterious(0.656)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
UBA6	55236	genome.wustl.edu	37	4	68504796	68504796	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018227.5	-1	validated	p.S534Y	1.000	302	0%	423	30%	6	33.3%	benign(0.142)	deleterious(0)	neutral(0.457)	HMMPfam_ThiF,superfamily_Activating enzymes of the ubiquitin-like proteins
UBA6	55236	genome.wustl.edu	37	4	68514830	68514830	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018227.5	-1	validated	p.V402L	1.000	156	0%	190	30%	2	50%	probably_damaging(0.961)	deleterious(0)	deleterious(0.849)	superfamily_Activating enzymes of the ubiquitin-like proteins
TMPRSS11A	339967	genome.wustl.edu	37	4	68777060	68777060	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182606.3	-1	validated	p.*422	0.860	392	0%	314	29.6%	0	-	-	-	-	NULL
TMPRSS11A	339967	genome.wustl.edu	37	4	68784871	68784871	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182606.3	-1	validated	p.F261V	0.975	345	0%	377	31.8%	0	-	benign(0.002)	tolerated(0.14)	neutral(0.249)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
TMPRSS11F	389208	genome.wustl.edu	37	4	68964623	68964623	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207407.2	-1	validated	p.T49P	1.000	144	0%	143	28.7%	0	-	possibly_damaging(0.911)	deleterious(0.02)	deleterious(0.746)	superfamily_SSF82671
TMPRSS11B	132724	genome.wustl.edu	37	4	69096937	69096937	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182502.3	-1	validated	p.A224T	1.000	146	0%	161	32.3%	0	-	possibly_damaging(0.951)	deleterious(0)	deleterious(0.839)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_HIS
TMPRSS11E	28983	genome.wustl.edu	37	4	69327565	69327565	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014058.3	+1	validated	p.R13I	0.525	269	0%	385	36.1%	0	-	possibly_damaging(0.926)	deleterious(0.01)	deleterious(0.780)	NULL
UGT2B15	7366	genome.wustl.edu	37	4	69519925	69519925	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001076.2	-1	validated	p.I381	0.964	243	0%	242	31.4%	0	-	-	-	-	HMMPfam_UDPGT,PatternScan_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
UGT2B10	7365	genome.wustl.edu	37	4	69681921	69681921	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001075.4	+1	validated	p.L62I	0.001	151	0%	98	27.6%	0	-	benign(0.004)	tolerated(0.3)	neutral(0.029)	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
UGT2B10	7365	genome.wustl.edu	37	4	69696349	69696349	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001075.4	+1	validated	p.I447L	0.592	219	0%	161	39.8%	5	0%	possibly_damaging(0.774)	tolerated(0.63)	neutral(0.292)	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
UGT2B11	10720	genome.wustl.edu	37	4	69885488	69885488	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000381096	-1	known	p.M205I	1.000	246	0%	195	27.7%	0	-	-	-	-	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
UGT2B28	54490	genome.wustl.edu	37	4	70146852	70146852	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053039.1	+1	provisional	p.K212Q	0.242	206	0%	112	32.1%	0	-	benign(0.366)	tolerated(0.15)	neutral(0.357)	HMMPfam_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
UGT2B28	54490	genome.wustl.edu	37	4	70284702	70284702	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000381079	+1	known	p.A377T	0.031	179	0%	97	41.2%	0	-	-	-	-	HMMPfam_UDPGT,PatternScan_UDPGT,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
SULT1E1	6783	genome.wustl.edu	37	4	70721029	70721029	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005420.2	-1	reviewed	p.N87	0.000	358	0%	409	28.1%	0	-	-	-	-	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
STATH	6779	genome.wustl.edu	37	4	70864160	70864160	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003154.2	+1	validated	p.K2N	0.710	386	0%	292	32.9%	0	-	unknown(0)	-	-	NULL
FDCSP	260436	genome.wustl.edu	37	4	71099746	71099746	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152997.2	+1	validated	p.S34R	0.005	315	0%	84	26.2%	0	-	possibly_damaging(0.681)	-	-	NULL
CSN3	1448	genome.wustl.edu	37	4	71114774	71114774	+	Nonsense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005212.2	+1	validated	p.Y49*	0.000	140	0%	163	36.2%	0	-	-	-	-	HMMPfam_Casein_kappa
SMR3A	26952	genome.wustl.edu	37	4	71232674	71232674	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012390.3	+1	validated	p.S123Y	0.002	303	0%	281	38.4%	0	-	unknown(0)	tolerated(0.1)	-	NULL
PROL1	58503	genome.wustl.edu	37	4	71265037	71265037	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021225.4	+1	reviewed	p.L12P	0.070	256	0.4%	97	21.6%	0	-	probably_damaging(0.99)	-	-	NULL
PROL1	58503	genome.wustl.edu	37	4	71275440	71275440	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021225.4	+1	reviewed	p.A132V	0.003	537	0%	851	31%	0	-	possibly_damaging(0.93)	-	-	NULL
AMBN	258	genome.wustl.edu	37	4	71469002	71469002	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016519.4	+1	reviewed	p.S225Y	0.980	301	0%	237	30%	5	100%	probably_damaging(0.982)	deleterious(0.01)	deleterious(0.832)	HMMPfam_Amelin,HMMSmart_SM00817
ENAM	10117	genome.wustl.edu	37	4	71508553	71508553	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031889.2	+1	reviewed	p.N470K	0.986	69	0%	60	33.3%	0	-	possibly_damaging(0.916)	tolerated(0.16)	neutral(0.426)	NULL
ENAM	10117	genome.wustl.edu	37	4	71508664	71508664	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031889.2	+1	reviewed	p.S507	0.822	61	0%	63	28.6%	0	-	-	-	-	NULL
ENAM	10117	genome.wustl.edu	37	4	71508902	71508902	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031889.2	+1	reviewed	p.L587V	0.053	96	0%	154	35.1%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
RUFY3	22902	genome.wustl.edu	37	4	71648895	71648895	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037442.2	+1	validated	p.R328W	1.000	144	0%	191	34.6%	7	28.5%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
GRSF1	2926	genome.wustl.edu	37	4	71693586	71693586	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002092.3	-1	reviewed	p.E373A	1.000	162	0%	313	35.1%	133	45.1%	possibly_damaging(0.812)	tolerated(0.33)	neutral(0.330)	superfamily_RNA-binding domain RBD
SLC4A4	8671	genome.wustl.edu	37	4	72222727	72222727	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134742.1	+1	reviewed	p.M185L	1.000	156	0%	153	29.4%	0	-	benign(0)	tolerated(1)	-	HMMPfam_Band_3_cyto,superfamily_PTrfase/Anion_transptr
SLC4A4	8671	genome.wustl.edu	37	4	72222762	72222762	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134742.1	+1	reviewed	p.L196F	1.000	168	0%	195	36.4%	0	-	possibly_damaging(0.946)	deleterious(0)	deleterious(0.835)	HMMPfam_Band_3_cyto,superfamily_PTrfase/Anion_transptr
GC	2638	genome.wustl.edu	37	4	72620150	72620150	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000583.2	-1	reviewed	p.T414A	1.000	267	0%	155	25.2%	0	-	benign(0.251)	tolerated(0.46)	neutral(0.037)	superfamily_Serum albumin-like,HMMPfam_VitD-bind_III
GC	2638	genome.wustl.edu	37	4	72649738	72649738	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000504199	-1	known	p.K19E	0.000	173	0%	72	45.8%	0	-	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	NULL
ADAMTS3	9508	genome.wustl.edu	37	4	73179448	73179448	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014243.1	-1	reviewed	p.S564Y	1.000	179	0%	145	31%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
ADAMTS3	9508	genome.wustl.edu	37	4	73280609	73280609	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014243.1	-1	reviewed	p.G195V	1.000	407	0%	342	24.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pep_M12B_propep
ADAMTS3	9508	genome.wustl.edu	37	4	73280661	73280661	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014243.1	-1	reviewed	p.E178*	1.000	329	0.3%	274	27.7%	1	0%	-	-	-	HMMPfam_Pep_M12B_propep
ANKRD17	26057	genome.wustl.edu	37	4	73957963	73957963	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032217.3	-1	reviewed	p.K1794N	1.000	95	0%	133	33.1%	13	15.3%	probably_damaging(0.976)	tolerated(0.12)	deleterious(0.678)	HMMSmart_SM00322,superfamily_Eukaryotic type KH-domain (KH-domain type I)
ANKRD17	26057	genome.wustl.edu	37	4	73984549	73984549	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032217.3	-1	reviewed	p.V1348	0.924	178	0%	176	31.2%	4	25%	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
ANKRD17	26057	genome.wustl.edu	37	4	74005854	74005854	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032217.3	-1	reviewed	p.E827*	1.000	272	0%	381	34.9%	2	100%	-	-	-	superfamily_Ankyrin repeat
AFP	174	genome.wustl.edu	37	4	74306416	74306416	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134.1	+1	reviewed	p.N123T	0.001	197	0%	228	32.9%	0	-	benign(0.003)	deleterious(0.02)	neutral(0.383)	superfamily_Serum_albumin,HMMPfam_Serum_albumin,HMMSmart_ALBUMIN
AFM	173	genome.wustl.edu	37	4	74361074	74361074	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001133.2	+1	reviewed	p.R372	0.942	111	0%	95	35.8%	0	-	-	-	-	superfamily_Serum albumin-like,HMMPfam_Serum_albumin,HMMSmart_SM00103
RASSF6	166824	genome.wustl.edu	37	4	74442344	74442344	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201431.1	-1	validated	p.E308*	1.000	257	0%	278	31.7%	3	33.3%	-	-	-	NULL
RASSF6	166824	genome.wustl.edu	37	4	74447576	74447576	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201431.1	-1	validated	p.S259R	0.973	226	0%	187	34.8%	3	33.3%	probably_damaging(0.991)	deleterious(0.03)	deleterious(0.808)	HMMPfam_RA,HMMSmart_SM00314
PPBP	5473	genome.wustl.edu	37	4	74853241	74853241	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002704.3	-1	reviewed	p.E93K	0.481	210	0%	174	35.6%	0	-	possibly_damaging(0.625)	deleterious(0)	deleterious(0.662)	HMMPfam_IL8,HMMSmart_SM00199,superfamily_Interleukin 8-like chemokines,PatternScan_SMALL_CYTOKINES_CXC
PARM1	25849	genome.wustl.edu	37	4	75937828	75937828	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015393.2	+1	validated	p.K79N	0.004	243	0%	358	32.7%	3	33.3%	possibly_damaging(0.919)	tolerated(0.18)	neutral(0.425)	NULL
RCHY1	25898	genome.wustl.edu	37	4	76434127	76434127	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015436.2	-1	reviewed	p.E77*	0.999	131	0%	159	32.7%	7	42.8%	-	-	-	HMMPfam_zf-CHY
THAP6	152815	genome.wustl.edu	37	4	76440715	76440715	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144721.4	+1	validated	p.S18L	1.000	222	0%	308	34.4%	7	42.8%	possibly_damaging(0.915)	tolerated(0.11)	deleterious(0.638)	HMMPfam_THAP
CDKL2	8999	genome.wustl.edu	37	4	76522369	76522369	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003948.3	-1	reviewed	p.G358C	0.036	189	0%	197	33.5%	0	-	benign(0.07)	tolerated(0.08)	neutral(0.305)	NULL
PPEF2	5470	genome.wustl.edu	37	4	76804083	76804083	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006239.2	-1	reviewed	p.S310N	1.000	161	0%	282	31.6%	0	-	benign(0)	tolerated(1)	-	HMMPfam_Metallophos,HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases
NAAA	27163	genome.wustl.edu	37	4	76842253	76842253	+	Silent	SNP	G	G	A	rs192956878	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000513045	-1	known	p.R35*	0.994	68	0%	113	31.9%	13	23%	-	-	-	NULL
ART3	419	genome.wustl.edu	37	4	77003569	77003569	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130016.1	+1	validated	p.R221I	0.001	113	0%	161	38.5%	0	-	possibly_damaging(0.792)	tolerated(0.06)	deleterious(0.619)	HMMPfam_ART,superfamily_ADP-ribosylation
SCARB2	950	genome.wustl.edu	37	4	77097062	77097062	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005506.2	-1	reviewed	p.S236P	1.000	150	0%	246	29.3%	47	34%	possibly_damaging(0.524)	tolerated(0.17)	neutral(0.235)	HMMPfam_CD36
SCARB2	950	genome.wustl.edu	37	4	77100759	77100759	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005506.2	-1	reviewed	p.E175K	0.977	117	0%	174	33.9%	51	33.3%	probably_damaging(0.971)	tolerated(0.15)	deleterious(0.654)	HMMPfam_CD36
SCARB2	950	genome.wustl.edu	37	4	77102246	77102246	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005506.2	-1	reviewed	p.R95I	0.999	250	0%	341	34%	33	42.4%	probably_damaging(0.997)	tolerated(0.75)	neutral(0.468)	HMMPfam_CD36
FAM47E	100129583	genome.wustl.edu	37	4	77177607	77177607	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136570.1	+1	validated	p.D117	0.000	52	0%	65	27.7%	0	-	-	-	-	NULL
FAM47E	100129583	genome.wustl.edu	37	4	77192742	77192742	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136570.1	+1	validated	p.E231*	0.890	98	0%	137	43.1%	0	-	-	-	-	NULL
CCDC158	339965	genome.wustl.edu	37	4	77278635	77278635	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042784.1	-1	validated	p.E689*	1.000	377	0%	369	22.8%	0	-	-	-	-	NULL
CCDC158	339965	genome.wustl.edu	37	4	77283469	77283469	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042784.1	-1	validated	e11-1	1.000	159	0%	145	22.1%	0	-	-	-	-	-
CCDC158	339965	genome.wustl.edu	37	4	77305418	77305418	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042784.1	-1	validated	p.E183D	1.000	157	0%	195	30.8%	0	-	possibly_damaging(0.948)	tolerated(0.49)	neutral(0.402)	NULL
SHROOM3	57619	genome.wustl.edu	37	4	77660727	77660727	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020859.3	+1	validated	p.I467	1.000	85	0%	131	31.3%	2	50%	-	-	-	NULL
SHROOM3	57619	genome.wustl.edu	37	4	77675899	77675899	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020859.3	+1	validated	p.S1421	0.000	55	0%	60	35%	5	20%	-	-	-	NULL
SHROOM3	57619	genome.wustl.edu	37	4	77680845	77680845	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020859.3	+1	validated	p.K1782N	1.000	112	0%	180	33.3%	13	46.1%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_ASD2
MRPL1	65008	genome.wustl.edu	37	4	78873669	78873669	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020236.3	+1	reviewed	p.R296C	1.000	418	0%	518	31.1%	32	37.5%	probably_damaging(1)	tolerated(0.25)	deleterious(0.537)	HMMPfam_Ribosomal_L1,superfamily_Ribosomal protein L1
FRAS1	80144	genome.wustl.edu	37	4	79359839	79359839	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025074.6	+1	reviewed	p.F1777S	1.000	181	0%	167	31.1%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FRAS1	80144	genome.wustl.edu	37	4	79410220	79410220	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025074.6	+1	reviewed	p.L2981I	0.998	142	0%	143	35.7%	13	46.1%	benign(0.389)	tolerated(0.31)	neutral(0.151)	HMMSmart_SM00237
BMP2K	55589	genome.wustl.edu	37	4	79782542	79782542	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198892.1	+1	reviewed	e9-1	1.000	236	0.8%	92	26.1%	0	-	-	-	-	-
PAQR3	152559	genome.wustl.edu	37	4	79856297	79856297	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040202.1	-1	validated	p.S109Y	1.000	145	0%	175	25.1%	3	66.6%	possibly_damaging(0.455)	tolerated(0.05)	deleterious(0.494)	HMMPfam_HlyIII
GK2	2712	genome.wustl.edu	37	4	80327869	80327869	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033214.2	-1	validated	p.S496R	1.000	213	0%	279	35.1%	0	-	benign(0.001)	tolerated(1)	-	HMMPfam_FGGY_C,superfamily_SSF53067
GK2	2712	genome.wustl.edu	37	4	80328185	80328185	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033214.2	-1	validated	p.C390	0.722	270	0%	374	39.6%	0	-	-	-	-	PatternScan_FGGY_KINASES_2,HMMPfam_FGGY_C,superfamily_SSF53067
ANTXR2	118429	genome.wustl.edu	37	4	80898737	80898737	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145794.1	-1	reviewed	p.A489D	0.000	205	0%	248	36.7%	3	33.3%	possibly_damaging(0.683)	deleterious(0)	deleterious(0.688)	NULL
ANTXR2	118429	genome.wustl.edu	37	4	80952821	80952821	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145794.1	-1	reviewed	p.L274	0.000	125	0%	89	23.6%	25	28%	-	-	-	HMMPfam_Anth_Ig
FGF5	2250	genome.wustl.edu	37	4	81207782	81207782	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004464.3	+1	reviewed	p.N255H	0.161	30	0%	34	29.4%	0	-	benign(0.313)	deleterious(0.01)	deleterious(0.503)	NULL
BMP3	651	genome.wustl.edu	37	4	81967791	81967791	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001201.2	+1	reviewed	p.P406S	1.000	60	0%	56	30.4%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_TGF_beta,HMMSmart_TGFB,superfamily_SSF57501
SEC31A	22872	genome.wustl.edu	37	4	83774758	83774758	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077207.1	-1	reviewed	p.K707Q	1.000	131	0%	216	30.1%	106	43.3%	benign(0.218)	tolerated(0.1)	neutral(0.308)	NULL
SEC31A	22872	genome.wustl.edu	37	4	83791560	83791560	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077207.1	-1	reviewed	p.A267D	1.000	99	0%	173	37.6%	44	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
THAP9	79725	genome.wustl.edu	37	4	83821965	83821965	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024672.4	+1	validated	p.S4R	1.000	14	0%	19	31.6%	0	-	probably_damaging(0.963)	tolerated(0.35)	neutral(0.426)	HMMPfam_THAP
LIN54	132660	genome.wustl.edu	37	4	83857201	83857201	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194282.2	-1	validated	p.R593Q	1.000	299	0.3%	429	32.6%	5	20%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	NULL
COPS4	51138	genome.wustl.edu	37	4	83987668	83987668	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016129.2	+1	reviewed	p.E322K	1.000	84	0%	98	21.4%	52	42.3%	benign(0.268)	tolerated(0.08)	neutral(0.329)	"HMMPfam_PCI,HMMSmart_SM00088,superfamily_""Winged helix"" DNA-binding domain"
PLAC8	51316	genome.wustl.edu	37	4	84015920	84015920	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130715.1	-1	validated	p.A90T	0.028	145	0%	201	34.3%	2	0%	benign(0)	tolerated(0.35)	neutral(0.021)	HMMPfam_PLAC8
PLAC8	51316	genome.wustl.edu	37	4	84026109	84026109	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130715.1	-1	validated	p.C61	1.000	102	0%	180	30.6%	1	0%	-	-	-	HMMPfam_PLAC8
HELQ	113510	genome.wustl.edu	37	4	84342795	84342795	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133636.2	-1	validated	p.F957C	1.000	220	0%	416	33.9%	6	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HELQ	113510	genome.wustl.edu	37	4	84367194	84367194	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133636.2	-1	validated	p.T480A	1.000	160	0%	247	26.3%	0	-	benign(0.341)	tolerated(0.82)	neutral(0.108)	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
AGPAT9	84803	genome.wustl.edu	37	4	84465702	84465702	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032717.3	+1	validated	p.R52Q	0.995	319	0%	448	28.8%	0	-	benign(0.131)	tolerated(0.19)	neutral(0.060)	NULL
CDS1	1040	genome.wustl.edu	37	4	85569718	85569718	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001263.3	+1	reviewed	p.N422T	1.000	134	0%	149	33.6%	4	0%	benign(0.108)	tolerated(0.11)	neutral(0.280)	NULL
WDFY3	23001	genome.wustl.edu	37	4	85645642	85645642	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014991.4	-1	reviewed	p.S2460A	0.925	179	0%	188	32.4%	3	66.6%	benign(0.004)	tolerated(0.49)	neutral(0.011)	NULL
WDFY3	23001	genome.wustl.edu	37	4	85664916	85664916	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014991.4	-1	reviewed	p.E2004*	1.000	164	0%	195	31.8%	4	50%	-	-	-	NULL
WDFY3	23001	genome.wustl.edu	37	4	85676502	85676502	+	Missense_Mutation	SNP	C	C	T	rs191431603	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014991.4	-1	reviewed	p.G1826R	1.000	101	0%	81	25.9%	0	-	benign(0.335)	deleterious(0.04)	neutral(0.454)	NULL
WDFY3	23001	genome.wustl.edu	37	4	85694034	85694034	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014991.4	-1	reviewed	p.E1601	1.000	151	0%	205	29.8%	3	33.3%	-	-	-	NULL
WDFY3	23001	genome.wustl.edu	37	4	85711000	85711000	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014991.4	-1	reviewed	p.R1183Q	1.000	177	0%	250	38.8%	2	100%	possibly_damaging(0.807)	tolerated(0.34)	neutral(0.327)	superfamily_Concanavalin A-like lectins/glucanases
ARHGAP24	83478	genome.wustl.edu	37	4	86863264	86863264	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025616.2	+1	validated	p.R146I	1.000	264	0%	220	29.1%	0	-	possibly_damaging(0.768)	tolerated(0.06)	deleterious(0.607)	superfamily_GTPase activation domain GAP
MAPK10	5602	genome.wustl.edu	37	4	86950428	86950428	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138982.2	-1	reviewed	e11-1	1.000	349	0%	327	16.5%	0	-	-	-	-	-
MAPK10	5602	genome.wustl.edu	37	4	86989047	86989047	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000515400	-1	known	p.E201*	1.000	275	0%	423	32.9%	5	20%	benign(0)	tolerated(0.47)	neutral(0.011)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
MAPK10	5602	genome.wustl.edu	37	4	87024349	87024349	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138982.2	-1	reviewed	p.F139L	1.000	362	0%	306	35.6%	5	40%	possibly_damaging(0.742)	tolerated(0.12)	deleterious(0.532)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_MAPK,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PTPN13	5783	genome.wustl.edu	37	4	87735648	87735648	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080685.2	+1	reviewed	p.L2473M	0.997	182	0%	306	31.7%	39	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_PTPc,superfamily_SSF52799
AFF1	4299	genome.wustl.edu	37	4	88052948	88052948	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005935.2	+1	validated	p.F1028L	0.996	321	0%	355	27.9%	8	62.5%	unknown(0)	deleterious(0.01)	-	HMMPfam_AF-4
KLHL8	57563	genome.wustl.edu	37	4	88091294	88091294	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020803.3	-1	validated	p.E492*	1.000	113	0%	150	34%	6	0%	-	-	-	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
HSD17B11	51170	genome.wustl.edu	37	4	88303435	88303435	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016245.3	-1	validated	p.R97Q	1.000	203	0%	229	34.9%	69	34.7%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains
SPARCL1	8404	genome.wustl.edu	37	4	88400690	88400690	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128310.1	-1	validated	p.L620M	0.998	118	0%	152	40.8%	304	0.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_SPARC_Ca_bdg,superfamily_EF-hand
SPARCL1	8404	genome.wustl.edu	37	4	88415107	88415107	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128310.1	-1	validated	p.S282L	0.056	380	0%	608	30.9%	170	0%	probably_damaging(0.96)	deleterious(0)	deleterious(0.848)	NULL
DSPP	1834	genome.wustl.edu	37	4	88532063	88532063	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014208.3	+1	reviewed	p.M1I	1.000	165	0%	150	26%	0	-	possibly_damaging(0.444)	-	-	NULL
DSPP	1834	genome.wustl.edu	37	4	88534324	88534324	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014208.3	+1	reviewed	p.S329Y	0.000	60	0%	78	25.6%	0	-	probably_damaging(0.991)	-	-	NULL
DMP1	1758	genome.wustl.edu	37	4	88583382	88583382	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004407.3	+1	reviewed	p.A151V	0.000	88	0%	135	40%	0	-	possibly_damaging(0.636)	deleterious(0.01)	deleterious(0.628)	HMMPfam_DMP1
DMP1	1758	genome.wustl.edu	37	4	88583903	88583903	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004407.3	+1	reviewed	p.L325M	0.000	105	0%	224	34.4%	0	-	benign(0.001)	deleterious(0)	neutral(0.445)	HMMPfam_DMP1
PKD2	5311	genome.wustl.edu	37	4	88986935	88986935	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000297.2	+1	reviewed	p.E754D	1.000	210	0%	406	25.4%	9	44.4%	probably_damaging(0.994)	tolerated(0.29)	deleterious(0.481)	superfamily_SSF47473
PKD2	5311	genome.wustl.edu	37	4	88989075	88989075	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000297.2	+1	reviewed	p.S795Y	1.000	188	0%	273	31.1%	9	33.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
ABCG2	9429	genome.wustl.edu	37	4	89036170	89036170	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004827.2	-1	reviewed	p.F294L	1.000	180	0%	258	26%	1	0%	possibly_damaging(0.924)	tolerated(0.1)	deleterious(0.659)	NULL
ABCG2	9429	genome.wustl.edu	37	4	89052332	89052332	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004827.2	-1	reviewed	p.E138*	1.000	268	0%	388	29.4%	0	-	-	-	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCG2	9429	genome.wustl.edu	37	4	89060953	89060953	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004827.2	-1	reviewed	p.S65	0.000	158	0%	171	28.1%	0	-	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
HERC6	55008	genome.wustl.edu	37	4	89304513	89304513	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017912.3	+1	validated	p.E114*	0.828	134	0%	279	35.5%	0	-	-	-	-	HMMPfam_RCC1,superfamily_RCC1/BLIP-II
HERC6	55008	genome.wustl.edu	37	4	89345078	89345078	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017912.3	+1	validated	p.N594H	0.018	83	0%	91	28.6%	1	0%	possibly_damaging(0.847)	deleterious(0.04)	deleterious(0.674)	NULL
PIGY	84992	genome.wustl.edu	37	4	89443161	89443161	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032906.3	-1	reviewed	p.E75K	1.000	186	0%	262	33.6%	51	50.9%	possibly_damaging(0.765)	tolerated(0.1)	deleterious(0.571)	HMMPfam_Trm112p
FAM13A	10144	genome.wustl.edu	37	4	89653297	89653297	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014883.2	-1	validated	p.V900A	1.000	215	0.5%	312	32.7%	6	16.6%	possibly_damaging(0.757)	tolerated(0.82)	neutral(0.280)	NULL
GPRIN3	285513	genome.wustl.edu	37	4	90169386	90169386	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198281.2	-1	validated	p.R626C	0.834	83	0%	99	41.4%	1	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
GPRIN3	285513	genome.wustl.edu	37	4	90170373	90170373	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198281.2	-1	validated	p.E297*	1.000	81	0%	90	40%	0	-	-	-	-	NULL
SNCA	6622	genome.wustl.edu	37	4	90650349	90650349	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000345.3	-1	reviewed	p.S129F	1.000	145	0%	114	34.2%	6	16.6%	possibly_damaging(0.749)	deleterious(0.04)	deleterious(0.624)	HMMPfam_Synuclein
SNCA	6622	genome.wustl.edu	37	4	90756815	90756815	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000345.3	-1	reviewed	p.D2Y	1.000	234	0%	356	32%	3	33.3%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_Synuclein
MMRN1	22915	genome.wustl.edu	37	4	90849082	90849082	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007351.2	+1	reviewed	p.S364	0.993	101	0%	60	35%	1	0%	-	-	-	NULL
MMRN1	22915	genome.wustl.edu	37	4	90856295	90856295	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007351.2	+1	reviewed	p.L488	0.728	122	0%	79	30.4%	0	-	-	-	-	NULL
MMRN1	22915	genome.wustl.edu	37	4	90856470	90856470	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007351.2	+1	reviewed	p.S547P	0.038	99	0%	81	29.6%	2	0%	possibly_damaging(0.805)	deleterious(0.05)	deleterious(0.648)	NULL
MMRN1	22915	genome.wustl.edu	37	4	90857607	90857607	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007351.2	+1	reviewed	p.E926K	0.956	143	0.7%	102	35.3%	3	0%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
FAM190A	401145	genome.wustl.edu	37	4	91549190	91549190	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145065.1	+1	validated	p.K580T	1.000	101	0%	134	38.1%	2	100%	possibly_damaging(0.619)	deleterious(0.02)	deleterious(0.599)	NULL
GRID2	2895	genome.wustl.edu	37	4	94316827	94316827	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001510.2	+1	validated	p.R439C	1.000	348	0%	263	33.1%	0	-	probably_damaging(0.984)	deleterious(0.03)	deleterious(0.795)	NULL
GRID2	2895	genome.wustl.edu	37	4	94376855	94376855	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001510.2	+1	validated	p.R530C	1.000	161	0%	147	27.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_PBPe,superfamily_SSF53850
ATOH1	474	genome.wustl.edu	37	4	94750656	94750656	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005172.1	+1	reviewed	p.K193N	1.000	58	0%	60	36.7%	0	-	possibly_damaging(0.793)	deleterious(0)	deleterious(0.742)	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic
SMARCAD1	56916	genome.wustl.edu	37	4	95194801	95194801	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128429.1	+1	validated	p.L536M	1.000	310	0%	409	31.3%	14	57.1%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
HPGDS	27306	genome.wustl.edu	37	4	95229877	95229877	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014485.2	-1	reviewed	p.E82*	0.997	214	0%	164	33.5%	0	-	-	-	-	superfamily_Glutathione S-transferase (GST) C-terminal domain
PDLIM5	10611	genome.wustl.edu	37	4	95376552	95376552	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000512274	+1	known	p.K38T	0.810	91	0%	113	41.6%	0	-	benign(0.113)	-	-	NULL
UNC5C	8633	genome.wustl.edu	37	4	96123919	96123919	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003728.2	-1	reviewed	p.R700Q	1.000	142	0.7%	176	28.4%	7	85.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
METAP1	23173	genome.wustl.edu	37	4	99962203	99962203	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015143.2	+1	validated	p.E148*	1.000	196	0%	222	35.6%	10	10%	-	-	-	HMMPfam_Peptidase_M24,superfamily_Creatinase/aminopeptidase
ADH6	130	genome.wustl.edu	37	4	100128602	100128602	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102470.1	-1	reviewed	e7+1	1.000	222	0%	262	32.1%	4	50%	-	-	-	-
ADH6	130	genome.wustl.edu	37	4	100137326	100137326	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102470.1	-1	reviewed	p.R38C	0.986	62	0%	99	38.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_GroES_like,HMMPfam_ADH_N
ADH1C	126	genome.wustl.edu	37	4	100268965	100268965	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000669.3	-1	reviewed	p.K19N	0.003	158	0%	193	29.5%	2	0%	benign(0)	tolerated(0.76)	neutral(0.001)	superfamily_GroES-like
MTTP	4547	genome.wustl.edu	37	4	100503127	100503127	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000253.2	+1	reviewed	p.L43I	0.553	230	0%	198	34.3%	0	-	benign(0.309)	tolerated(0.39)	neutral(0.113)	HMMPfam_Vitellogenin_N,HMMSmart_LPD_N,superfamily_Lipid_transp_b-sht_shell
MTTP	4547	genome.wustl.edu	37	4	100512829	100512829	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000253.2	+1	reviewed	p.A214T	0.946	174	0%	134	28.4%	0	-	benign(0.309)	tolerated(0.07)	neutral(0.415)	HMMPfam_Vitellogenin_N,HMMSmart_LPD_N,superfamily_Lipid_transp_b-sht_shell
BANK1	55024	genome.wustl.edu	37	4	102839259	102839259	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017935.4	+1	reviewed	p.K373N	0.000	141	0%	74	37.8%	0	-	benign(0.044)	tolerated(0.58)	neutral(0.007)	superfamily_Ankyrin repeat
CISD2	493856	genome.wustl.edu	37	4	103806387	103806387	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008388.3	+1	reviewed	p.R40W	1.000	156	0%	261	36.8%	89	43.8%	probably_damaging(0.996)	tolerated(0.08)	deleterious(0.762)	HMMPfam_MitoNEET_N
SLC9B2	133308	genome.wustl.edu	37	4	103966150	103966150	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178833.4	-1	validated	p.S298Y	1.000	202	0%	189	26.5%	0	-	probably_damaging(0.991)	deleterious(0.04)	deleterious(0.793)	HMMPfam_Na_H_Exchanger
CENPE	1062	genome.wustl.edu	37	4	104079584	104079584	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001813.2	-1	validated	p.A969V	0.973	193	0%	102	26.5%	1	0%	possibly_damaging(0.799)	tolerated(0.18)	neutral(0.357)	NULL
CENPE	1062	genome.wustl.edu	37	4	104081905	104081905	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001813.2	-1	validated	p.K721	0.141	125	0%	81	30.9%	0	-	-	-	-	NULL
TET2	54790	genome.wustl.edu	37	4	106164817	106164817	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127208.1	+1	validated	p.L1229I	0.982	173	0%	270	28.1%	4	25%	possibly_damaging(0.933)	tolerated(0.34)	neutral(0.402)	NULL
TET2	54790	genome.wustl.edu	37	4	106193807	106193807	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127208.1	+1	validated	p.V1423	0.998	156	0%	244	36.1%	5	40%	-	-	-	NULL
TET2	54790	genome.wustl.edu	37	4	106197205	106197205	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127208.1	+1	validated	p.V1846	0.998	77	0%	127	30.7%	5	60%	-	-	-	NULL
PPA2	27068	genome.wustl.edu	37	4	106307787	106307787	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176869.2	-1	reviewed	p.N292	0.007	146	0%	142	31.7%	92	40.2%	-	-	-	superfamily_Inorganic pyrophosphatase
GSTCD	79807	genome.wustl.edu	37	4	106746865	106746865	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031720.2	+1	validated	p.R480C	1.000	229	0%	293	35.5%	5	40%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_S-adenosyl-L-methionine-dependent methyltransferases
PAPSS1	9061	genome.wustl.edu	37	4	108603275	108603275	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005443.4	-1	validated	p.D189N	1.000	199	0%	141	26.2%	14	50%	benign(0.354)	deleterious(0.01)	deleterious(0.518)	HMMPfam_APS_kinase,superfamily_P-loop containing nucleoside triphosphate hydrolases
LOC389217	389217	genome.wustl.edu	37	4	110474711	110474711	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001717714.1	-1	model	p.T193	0.966	16	0%	19	26.3%	0	-	-	-	-	HMMPfam_NAP
CFI	3426	genome.wustl.edu	37	4	110667585	110667585	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000204.3	-1	reviewed	p.V408I	0.000	192	0%	219	36.5%	29	6.8%	benign(0)	tolerated(0.22)	neutral(0.042)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
CFI	3426	genome.wustl.edu	37	4	110673649	110673649	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000204.3	-1	reviewed	p.E305D	0.628	138	0%	220	33.6%	17	5.8%	benign(0.275)	tolerated(0.17)	neutral(0.088)	superfamily_LDL receptor-like module
LRIT3	345193	genome.wustl.edu	37	4	110791896	110791896	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198506.2	+1	validated	p.S619Y	1.000	134	0%	159	23.9%	1	100%	probably_damaging(0.976)	tolerated(0.06)	deleterious(0.740)	NULL
EGF	1950	genome.wustl.edu	37	4	110834560	110834560	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001963.4	+1	reviewed	p.P23	0.000	192	0%	212	34.9%	0	-	-	-	-	NULL
EGF	1950	genome.wustl.edu	37	4	110864427	110864427	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001963.4	+1	reviewed	p.E115D	0.987	111	0%	110	22.7%	0	-	benign(0.001)	tolerated(0.8)	neutral(0.001)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
EGF	1950	genome.wustl.edu	37	4	110864537	110864537	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001963.4	+1	reviewed	p.I152T	0.365	119	0%	150	30%	0	-	benign(0)	tolerated(0.34)	neutral(0.023)	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
EGF	1950	genome.wustl.edu	37	4	110897208	110897208	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001963.4	+1	reviewed	p.E624*	1.000	187	0%	224	29.9%	0	-	-	-	-	HMMPfam_Ldl_recept_b,HMMSmart_LY,superfamily_SSF63825
ENPEP	2028	genome.wustl.edu	37	4	111474533	111474533	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001977.3	+1	validated	p.R855Q	0.916	366	0%	305	35.7%	8	25%	benign(0.026)	tolerated(0.64)	neutral(0.004)	NULL
ENPEP	2028	genome.wustl.edu	37	4	111480832	111480832	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001977.3	+1	validated	p.R891Q	0.999	265	0%	291	31.6%	13	7.6%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
AP1AR	55435	genome.wustl.edu	37	4	113189329	113189329	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018569.4	+1	validated	p.R225C	1.000	108	0%	116	27.6%	11	36.3%	benign(0.011)	deleterious(0)	neutral(0.445)	NULL
ALPK1	80216	genome.wustl.edu	37	4	113359735	113359735	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102406.1	+1	validated	p.F1095C	1.000	226	0%	253	39.9%	5	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Alpha_kinase,HMMSmart_SM00811,superfamily_Protein kinase-like (PK-like)
C4orf21	55345	genome.wustl.edu	37	4	113468455	113468455	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000505019	-1	known	p.R1862*	1.000	118	0%	182	34.1%	2	0%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
C4orf21	55345	genome.wustl.edu	37	4	113540239	113540239	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000505019	-1	known	p.T320I	0.000	103	0%	104	37.5%	0	-	probably_damaging(0.996)	tolerated(0.19)	deleterious(0.511)	NULL
MIR302C	442895	genome.wustl.edu	37	4	113569538	113569538	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000362232	-1	known	NULL	1.000	172	0%	214	33.6%	0	-	-	-	-	-
ANK2	287	genome.wustl.edu	37	4	114163335	114163335	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001148.4	+1	reviewed	p.D287E	1.000	297	0%	342	35.1%	1	0%	benign(0)	tolerated(0.67)	neutral(0.003)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
ANK2	287	genome.wustl.edu	37	4	114264208	114264208	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000514960	+1	known	p.R399W	1.000	344	0%	472	32.2%	0	-	-	-	-	NULL
ANK2	287	genome.wustl.edu	37	4	114267087	114267087	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001148.4	+1	reviewed	p.R1427Q	1.000	173	1.2%	103	30.1%	1	0%	probably_damaging(1)	-	-	NULL
ANK2	287	genome.wustl.edu	37	4	114271387	114271387	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001148.4	+1	reviewed	p.D1470N	1.000	190	0%	88	34.1%	2	50%	benign(0.174)	-	-	NULL
ANK2	287	genome.wustl.edu	37	4	114277728	114277728	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001148.4	+1	reviewed	p.L2652	0.006	178	0%	250	24.8%	0	-	-	-	-	NULL
ARSJ	79642	genome.wustl.edu	37	4	114899595	114899595	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024590.3	-1	validated	p.G132	1.000	69	0%	97	37.1%	1	0%	-	-	-	HMMPfam_Sulfatase,PatternScan_SULFATASE_1,superfamily_Alkaline phosphatase-like
NDST4	64579	genome.wustl.edu	37	4	115858492	115858492	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022569.1	-1	provisional	p.F463L	1.000	287	0%	312	25.3%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
TRAM1L1	133022	genome.wustl.edu	37	4	118006227	118006227	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152402.2	-1	validated	p.R108K	0.616	192	0%	302	33.1%	7	28.5%	benign(0.013)	tolerated(0.71)	neutral(0.002)	HMMPfam_TRAM1
NDST3	9348	genome.wustl.edu	37	4	118975899	118975899	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004784.2	+1	reviewed	p.F278L	0.999	278	0%	176	31.2%	0	-	benign(0.053)	tolerated(0.12)	neutral(0.264)	NULL
NDST3	9348	genome.wustl.edu	37	4	119059286	119059286	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004784.2	+1	reviewed	p.L434	0.887	125	0%	127	37.8%	0	-	-	-	-	NULL
NDST3	9348	genome.wustl.edu	37	4	119174662	119174662	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004784.2	+1	reviewed	p.S803Y	1.000	82	0%	88	35.2%	0	-	benign(0.126)	deleterious(0.02)	neutral(0.394)	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
SEC24D	9871	genome.wustl.edu	37	4	119736217	119736217	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014822.2	-1	reviewed	p.Q256P	1.000	140	0%	228	30.7%	19	31.5%	benign(0.002)	tolerated(0.5)	neutral(0.010)	superfamily_beta-sandwich domain of Sec23/24
SEC24D	9871	genome.wustl.edu	37	4	119738496	119738496	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014822.2	-1	reviewed	p.S107Y	0.160	267	0%	574	27.7%	14	42.8%	possibly_damaging(0.92)	deleterious(0.01)	deleterious(0.776)	NULL
SYNPO2	171024	genome.wustl.edu	37	4	119952192	119952192	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133477.2	+1	validated	p.K754N	1.000	158	0%	175	34.9%	4	0%	probably_damaging(1)	tolerated(0.15)	deleterious(0.741)	NULL
FABP2	2169	genome.wustl.edu	37	4	120240239	120240239	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000134.3	-1	reviewed	p.V119A	0.000	192	0%	109	26.6%	0	-	benign(0.001)	tolerated(0.75)	neutral(0.002)	HMMPfam_Lipocalin,superfamily_Lipocalins
PDE5A	8654	genome.wustl.edu	37	4	120427071	120427071	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001083.3	-1	reviewed	p.F736V	1.000	105	0%	20	20%	3	33.3%	probably_damaging(0.955)	deleterious(0.04)	deleterious(0.748)	HMMPfam_PDEase_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like
PDE5A	8654	genome.wustl.edu	37	4	120446778	120446778	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001083.3	-1	reviewed	p.L569M	0.994	211	0%	155	35.5%	3	33.3%	benign(0)	tolerated(0.19)	neutral(0.050)	superfamily_HD-domain/PDEase-like
PDE5A	8654	genome.wustl.edu	37	4	120527901	120527901	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001083.3	-1	reviewed	p.A235V	0.995	119	0%	124	31.5%	2	50%	benign(0.121)	deleterious(0.02)	neutral(0.393)	HMMPfam_GAF,HMMSmart_SM00065,superfamily_GAF domain-like
QRFPR	84109	genome.wustl.edu	37	4	122251672	122251672	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000334383	-1	known	p.E231*	1.000	150	0%	228	31.6%	0	-	-	-	-	HMMPfam_7tm_1
QRFPR	84109	genome.wustl.edu	37	4	122254041	122254041	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198179.2	-1	validated	p.K244N	1.000	269	0%	276	29.7%	0	-	possibly_damaging(0.461)	tolerated(0.11)	neutral(0.422)	HMMPfam_7tm_1,superfamily_SSF81321
TMEM155	132332	genome.wustl.edu	37	4	122681518	122681518	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152399.2	-1	validated	p.P108	0.001	192	0%	298	34.2%	0	-	-	-	-	NULL
EXOSC9	5393	genome.wustl.edu	37	4	122723938	122723938	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034194.1	+1	validated	p.E91K	1.000	161	0.6%	247	33.6%	13	46.1%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_RNase_PH,superfamily_Ribosomal_S5_D2-typ_fold
EXOSC9	5393	genome.wustl.edu	37	4	122731249	122731249	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034194.1	+1	validated	p.D245Y	1.000	173	0%	222	30.2%	24	45.8%	possibly_damaging(0.945)	deleterious(0.03)	deleterious(0.754)	HMMPfam_RNase_PH_C,superfamily_3_ExoRNase
CCNA2	890	genome.wustl.edu	37	4	122740665	122740665	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001237.3	-1	validated	p.K288N	1.000	224	0%	310	28.4%	15	60%	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	HMMSmart_SM00385,HMMPfam_Cyclin_N,superfamily_Cyclin-like
BBS7	55212	genome.wustl.edu	37	4	122756386	122756386	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176824.1	-1	reviewed	p.R475I	1.000	440	0%	542	24.7%	3	0%	possibly_damaging(0.926)	deleterious(0.03)	deleterious(0.739)	NULL
BBS7	55212	genome.wustl.edu	37	4	122774171	122774171	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176824.1	-1	reviewed	p.D263	1.000	349	0%	526	28.3%	5	60%	-	-	-	NULL
BBS7	55212	genome.wustl.edu	37	4	122782752	122782752	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176824.1	-1	reviewed	p.F83C	1.000	211	0%	253	37.5%	16	43.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TRPC3	7222	genome.wustl.edu	37	4	122825563	122825563	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130698.1	-1	validated	p.L723I	1.000	178	0%	153	20.9%	0	-	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	HMMPfam_Ion_trans
TRPC3	7222	genome.wustl.edu	37	4	122828662	122828662	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130698.1	-1	validated	p.A618D	1.000	63	0%	41	26.8%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans
KIAA1109	84162	genome.wustl.edu	37	4	123091866	123091866	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015312.3	+1	reviewed	p.E22*	1.000	233	0%	251	21.5%	1	100%	-	-	-	NULL
KIAA1109	84162	genome.wustl.edu	37	4	123128276	123128276	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015312.3	+1	reviewed	p.D504Y	1.000	135	0%	79	26.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIAA1109	84162	genome.wustl.edu	37	4	123147884	123147884	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015312.3	+1	reviewed	p.G939E	1.000	199	0%	318	29.2%	1	0%	probably_damaging(0.965)	tolerated(0.05)	deleterious(0.752)	NULL
KIAA1109	84162	genome.wustl.edu	37	4	123168473	123168473	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015312.3	+1	reviewed	p.H1825N	1.000	251	0%	231	41.1%	5	100%	possibly_damaging(0.806)	tolerated(0.74)	neutral(0.305)	NULL
KIAA1109	84162	genome.wustl.edu	37	4	123178643	123178643	+	Silent	SNP	C	C	T	rs79188364		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000419325	+1	known	p.R162*	1.000	177	0%	130	50.8%	7	57.1%	-	-	-	NULL
KIAA1109	84162	genome.wustl.edu	37	4	123192396	123192396	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015312.3	+1	reviewed	p.R2573C	1.000	125	0%	121	28.1%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIAA1109	84162	genome.wustl.edu	37	4	123255554	123255554	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015312.3	+1	reviewed	p.S3901Y	1.000	200	0%	168	29.8%	4	75%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
KIAA1109	84162	genome.wustl.edu	37	4	123283345	123283345	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000306802	+1	known	p.S1363L	0.178	123	0%	147	25.9%	30	56.6%	-	-	-	HMMPfam_FSA_C
ADAD1	132612	genome.wustl.edu	37	4	123336572	123336572	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139243.3	+1	validated	p.A430T	1.000	169	0%	214	30.4%	0	-	possibly_damaging(0.568)	deleterious(0.02)	deleterious(0.578)	HMMPfam_A_deamin,HMMSmart_SM00552
ADAD1	132612	genome.wustl.edu	37	4	123350880	123350880	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139243.3	+1	validated	p.Q573*	0.989	141	0%	169	33.1%	0	-	-	-	-	HMMSmart_SM00552
BBS12	166379	genome.wustl.edu	37	4	123663688	123663688	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152618.2	+1	reviewed	p.R214Q	0.000	82	0%	99	35.4%	4	50%	benign(0)	tolerated(0.67)	neutral(0.003)	HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like
NUDT6	11162	genome.wustl.edu	37	4	123814013	123814013	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007083.3	-1	validated	p.E307D	0.043	72	0%	74	16.2%	4	25%	benign(0)	tolerated(0.64)	neutral(0.003)	NULL
NUDT6	11162	genome.wustl.edu	37	4	123833751	123833751	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007083.3	-1	validated	p.K157R	1.000	119	0%	106	28.3%	4	25%	benign(0.159)	tolerated(0.08)	neutral(0.314)	HMMPfam_NUDIX,superfamily_Nudix
SPATA5	166378	genome.wustl.edu	37	4	123978405	123978405	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145207.2	+1	validated	p.F725L	1.000	213	0%	252	27%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
ANKRD50	57182	genome.wustl.edu	37	4	125590795	125590795	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020337.2	-1	validated	p.S1213P	1.000	144	0%	97	29.9%	10	10%	benign(0.255)	deleterious(0)	deleterious(0.471)	NULL
ANKRD50	57182	genome.wustl.edu	37	4	125593296	125593296	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020337.2	-1	validated	p.S379L	0.999	262	0%	150	33.3%	3	66.6%	benign(0.005)	deleterious(0)	neutral(0.445)	NULL
FAT4	79633	genome.wustl.edu	37	4	126240401	126240401	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024582.4	+1	validated	p.K945	1.000	107	0%	129	27.9%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126240669	126240669	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024582.4	+1	validated	p.I1035V	1.000	106	0%	143	33.6%	0	-	benign(0.073)	tolerated(0.16)	neutral(0.065)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126328204	126328204	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024582.4	+1	validated	p.R1826I	1.000	112	0%	108	30.6%	1	0%	probably_damaging(0.989)	tolerated(0.47)	neutral(0.451)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126371152	126371152	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024582.4	+1	validated	p.K2994T	1.000	68	0%	65	35.4%	0	-	probably_damaging(0.974)	deleterious(0.01)	deleterious(0.822)	HMMPfam_Cadherin,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126371388	126371388	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024582.4	+1	validated	p.A3073S	0.998	157	0%	160	33.1%	0	-	benign(0.007)	deleterious(0.03)	neutral(0.364)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126372183	126372183	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024582.4	+1	validated	p.F3338V	1.000	156	0%	159	30.2%	0	-	benign(0.029)	tolerated(1)	neutral(0.002)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126372196	126372196	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024582.4	+1	validated	p.R3342Q	1.000	158	0%	157	33.8%	0	-	probably_damaging(0.998)	tolerated(0.16)	deleterious(0.534)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126372958	126372958	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024582.4	+1	validated	p.S3596Y	1.000	77	0%	77	33.8%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT4	79633	genome.wustl.edu	37	4	126389878	126389878	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024582.4	+1	validated	p.F4037L	1.000	142	0%	167	32.9%	4	50%	benign(0.02)	tolerated(0.09)	neutral(0.297)	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
FAT4	79633	genome.wustl.edu	37	4	126398378	126398378	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024582.4	+1	validated	p.R4121I	1.000	244	0%	314	33.8%	1	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
FAT4	79633	genome.wustl.edu	37	4	126412648	126412648	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024582.4	+1	validated	p.R4891*	0.122	78	0%	100	40%	10	60%	-	-	-	NULL
INTU	27152	genome.wustl.edu	37	4	128554272	128554272	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015693.3	+1	validated	p.D28A	0.079	147	0%	132	32.6%	1	100%	benign(0.055)	deleterious(0.04)	neutral(0.352)	NULL
SLC25A31	83447	genome.wustl.edu	37	4	128688232	128688232	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031291.2	+1	validated	p.R164*	1.000	284	0%	307	30.9%	0	-	-	-	-	superfamily_Mitoch_carrier,HMMPfam_Mito_carr
SLC25A31	83447	genome.wustl.edu	37	4	128694685	128694685	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031291.2	+1	validated	p.D302Y	1.000	437	0%	418	16.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Mitoch_carrier,HMMPfam_Mito_carr
HSPA4L	22824	genome.wustl.edu	37	4	128722949	128722949	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014278.2	+1	provisional	p.A180V	1.000	243	0%	243	28%	0	-	probably_damaging(0.973)	deleterious(0.02)	deleterious(0.798)	HMMPfam_HSP70,superfamily_SSF53067
HSPA4L	22824	genome.wustl.edu	37	4	128753837	128753837	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014278.2	+1	provisional	e19-1	1.000	94	0%	113	18.6%	2	100%	-	-	-	-
PLK4	10733	genome.wustl.edu	37	4	128807128	128807128	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014264.3	+1	reviewed	p.F201	1.000	243	0%	488	32.6%	2	50%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
PLK4	10733	genome.wustl.edu	37	4	128812325	128812325	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014264.3	+1	reviewed	p.L637I	0.997	157	0%	199	27.6%	2	50%	probably_damaging(0.999)	tolerated(0.31)	deleterious(0.517)	superfamily_Kinase_like
LARP1B	55132	genome.wustl.edu	37	4	129028409	129028409	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018078.2	+1	reviewed	p.F310S	1.000	141	0%	207	36.2%	22	36.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PGRMC2	10424	genome.wustl.edu	37	4	129193540	129193540	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006320.4	-1	validated	p.R184Q	1.000	121	0%	126	34.9%	90	51.1%	possibly_damaging(0.921)	tolerated(0.08)	deleterious(0.671)	HMMPfam_Cyt-b5,superfamily_Cyt_B5
PCDH18	54510	genome.wustl.edu	37	4	138451025	138451025	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019035.3	-1	reviewed	p.E740K	1.000	319	0%	398	31.9%	8	0%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
PCDH18	54510	genome.wustl.edu	37	4	138452040	138452040	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019035.3	-1	reviewed	p.G401	0.075	194	0%	163	23.9%	3	33.3%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
SLC7A11	23657	genome.wustl.edu	37	4	139153501	139153501	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014331.3	-1	validated	p.G147E	1.000	107	0%	164	37.2%	5	40%	benign(0.341)	deleterious(0)	deleterious(0.552)	HMMPfam_AA_permease
CCRN4L	25819	genome.wustl.edu	37	4	139965925	139965925	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012118.2	+1	reviewed	p.H198R	1.000	102	0%	162	29%	16	56.2%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Exo_endo_phos,superfamily_Exo_endo_phos
ELF2	1998	genome.wustl.edu	37	4	139983123	139983123	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201999.1	-1	validated	p.E222D	0.999	223	0%	320	34.7%	3	0%	benign(0.307)	tolerated(0.06)	neutral(0.418)	HMMPfam_Ets,HMMSmart_ETS,superfamily_SSF46785
C4orf49	84709	genome.wustl.edu	37	4	140187926	140187926	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032623.3	-1	validated	p.L184	0.000	290	0%	671	32.2%	1	0%	-	-	-	NULL
MAML3	55534	genome.wustl.edu	37	4	140811599	140811599	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018717.4	-1	validated	p.E331K	1.000	98	0%	145	30.3%	2	100%	probably_damaging(0.998)	tolerated(0.14)	deleterious(0.724)	NULL
SCOC	60592	genome.wustl.edu	37	4	141300287	141300287	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032547.2	+1	reviewed	p.R28I	0.003	456	0%	548	31%	21	47.6%	benign(0.167)	tolerated(0.05)	neutral(0.360)	NULL
TBC1D9	23158	genome.wustl.edu	37	4	141580846	141580846	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015130.2	-1	validated	p.V606A	1.000	90	0%	168	36.3%	4	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p
TBC1D9	23158	genome.wustl.edu	37	4	141592016	141592016	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015130.2	-1	validated	p.R375Q	1.000	228	0%	351	32.8%	1	100%	possibly_damaging(0.471)	tolerated(0.06)	deleterious(0.478)	NULL
INPP4B	8821	genome.wustl.edu	37	4	143130163	143130163	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001101669.1	-1	reviewed	p.E285*	1.000	169	0%	188	69.7%	0	-	-	-	-	NULL
SMARCA5	8467	genome.wustl.edu	37	4	144438535	144438535	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003601.2	+1	reviewed	p.K69Q	1.000	189	0%	195	29.7%	8	62.5%	benign(0.086)	tolerated(0.38)	neutral(0.024)	superfamily_SSF52540
SMARCA5	8467	genome.wustl.edu	37	4	144469190	144469190	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003601.2	+1	reviewed	p.K961T	1.000	137	0%	144	37.5%	121	41.3%	possibly_damaging(0.864)	deleterious(0)	deleterious(0.779)	HMMSmart_SANT,superfamily_Homeodomain_like,HMMPfam_SLIDE
FREM3	166752	genome.wustl.edu	37	4	144498871	144498871	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000329798	-1	known	p.L2105I	1.000	183	0%	215	38.6%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_Calx-beta,HMMSmart_SM00237
FREM3	166752	genome.wustl.edu	37	4	144616969	144616969	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000329798	-1	known	p.F1620L	1.000	264	0%	328	25%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FREM3	166752	genome.wustl.edu	37	4	144621307	144621307	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000329798	-1	known	p.R174	1.000	28	0%	25	20%	0	-	-	-	-	NULL
HHIP	64399	genome.wustl.edu	37	4	145567969	145567969	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022475.1	+1	reviewed	p.L48M	1.000	163	0%	232	34.9%	2	0%	probably_damaging(0.954)	tolerated(0.05)	deleterious(0.743)	HMMPfam_Folate_rec
HHIP	64399	genome.wustl.edu	37	4	145581041	145581041	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000434550	+1	known	p.I294M	0.346	20	0%	11	54.5%	0	-	possibly_damaging(0.811)	tolerated(0.24)	neutral(0.343)	NULL
POU4F2	5458	genome.wustl.edu	37	4	147561045	147561045	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004575.2	+1	validated	p.E105D	1.000	199	0%	206	35.9%	0	-	benign(0.184)	tolerated(0.24)	neutral(0.054)	NULL
POU4F2	5458	genome.wustl.edu	37	4	147561165	147561165	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004575.2	+1	validated	p.M145I	1.000	279	0%	371	35.8%	0	-	possibly_damaging(0.496)	deleterious(0)	deleterious(0.610)	NULL
POU4F2	5458	genome.wustl.edu	37	4	147561582	147561582	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004575.2	+1	validated	p.A284	1.000	70	0%	58	37.9%	0	-	-	-	-	HMMPfam_Pou,HMMSmart_SM00352,superfamily_lambda repressor-like DNA-binding domains
TTC29	83894	genome.wustl.edu	37	4	147788658	147788658	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031956.2	-1	validated	p.A293T	0.969	141	0%	89	22.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
PRMT10	90826	genome.wustl.edu	37	4	148582067	148582067	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138364.2	-1	provisional	p.R359Q	1.000	124	0%	130	26.2%	2	50%	possibly_damaging(0.944)	tolerated(0.38)	neutral(0.406)	superfamily_S-adenosyl-L-methionine-dependent methyltransferases
PRMT10	90826	genome.wustl.edu	37	4	148591848	148591848	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138364.2	-1	provisional	p.E264*	1.000	182	0%	312	34.3%	3	0%	-	-	-	superfamily_S-adenosyl-L-methionine-dependent methyltransferases
NR3C2	4306	genome.wustl.edu	37	4	149041369	149041369	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000901.4	-1	reviewed	p.R861*	1.000	179	0%	270	34.4%	0	-	-	-	-	HMMPfam_Hormone_recep,HMMSmart_HOLI,superfamily_Str_ncl_receptor
NR3C2	4306	genome.wustl.edu	37	4	149357226	149357226	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000901.4	-1	reviewed	p.S263R	1.000	117	0%	146	37.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NR3C2	4306	genome.wustl.edu	37	4	149357283	149357283	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000901.4	-1	reviewed	p.R244*	0.702	121	0%	132	31.1%	2	0%	-	-	-	NULL
DCLK2	166614	genome.wustl.edu	37	4	151119184	151119184	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040260.2	+1	validated	p.R297Q	1.000	250	0%	329	24.3%	1	100%	benign(0.419)	tolerated(0.34)	neutral(0.159)	NULL
MAB21L2	10586	genome.wustl.edu	37	4	151504369	151504369	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006439.4	+1	reviewed	p.Y63C	1.000	60	0%	59	30.5%	0	-	benign(0.278)	deleterious(0.05)	neutral(0.375)	HMMPfam_Mab-21
MAB21L2	10586	genome.wustl.edu	37	4	151504883	151504883	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006439.4	+1	reviewed	p.F234	1.000	27	0%	27	18.5%	0	-	-	-	-	HMMPfam_Mab-21
LRBA	987	genome.wustl.edu	37	4	151821202	151821202	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006726.2	-1	validated	p.L641	0.997	110	0%	86	38.4%	9	66.6%	-	-	-	superfamily_ARM repeat
LRBA	987	genome.wustl.edu	37	4	151850005	151850005	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006726.2	-1	validated	p.K143N	0.944	189	0%	207	35.3%	2	50%	benign(0.15)	tolerated(0.5)	neutral(0.023)	superfamily_ARM repeat
FAM160A1	729830	genome.wustl.edu	37	4	152550986	152550986	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001109977.1	+1	predicted	p.D371Y	1.000	141	0%	126	41.3%	3	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_RAI16-like
FAM160A1	729830	genome.wustl.edu	37	4	152559868	152559868	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001109977.1	+1	predicted	p.G396C	1.000	386	0%	374	29.9%	4	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_RAI16-like
FAM160A1	729830	genome.wustl.edu	37	4	152577430	152577430	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001109977.1	+1	predicted	p.E866	1.000	184	0%	179	35.8%	9	44.4%	-	-	-	NULL
FBXW7	55294	genome.wustl.edu	37	4	153250916	153250916	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033632.2	-1	reviewed	p.H382N	1.000	141	0%	100	37%	5	20%	probably_damaging(0.99)	tolerated(0.06)	deleterious(0.764)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
TIGD4	201798	genome.wustl.edu	37	4	153691189	153691189	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145720.2	-1	reviewed	p.I323S	1.000	151	0%	183	30.6%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_DDE
FHDC1	85462	genome.wustl.edu	37	4	153881906	153881906	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033393.2	+1	validated	p.R254W	1.000	315	0%	375	29.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_FH2,HMMPfam_FH2,superfamily_FH2_actin_bd
KIAA0922	23240	genome.wustl.edu	37	4	154507477	154507477	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015196.3	+1	validated	p.T475	1.000	214	0%	285	33%	1	0%	-	-	-	NULL
KIAA0922	23240	genome.wustl.edu	37	4	154525248	154525248	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015196.3	+1	validated	p.E1027D	0.939	47	0%	62	37.1%	2	50%	probably_damaging(0.983)	deleterious(0.04)	deleterious(0.778)	NULL
TLR2	7097	genome.wustl.edu	37	4	154624535	154624535	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003264.3	+1	reviewed	p.M159T	0.000	57	0%	82	34.1%	1	0%	benign(0)	tolerated(0.67)	neutral(0.003)	superfamily_SSF52058
TLR2	7097	genome.wustl.edu	37	4	154625226	154625226	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003264.3	+1	reviewed	p.L389	0.000	69	0%	52	40.4%	1	0%	-	-	-	superfamily_SSF52058
DCHS2	54798	genome.wustl.edu	37	4	155156777	155156777	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017639.3	-1	validated	p.I2554	0.062	112	0.9%	81	32.1%	0	-	-	-	-	NULL
DCHS2	54798	genome.wustl.edu	37	4	155157356	155157356	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017639.3	-1	validated	p.H2361	0.000	94	0%	109	31.2%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DCHS2	54798	genome.wustl.edu	37	4	155160341	155160341	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017639.3	-1	validated	p.F2036L	0.424	105	0%	75	37.3%	0	-	probably_damaging(0.971)	deleterious(0)	deleterious(0.857)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DCHS2	54798	genome.wustl.edu	37	4	155160445	155160445	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017639.3	-1	validated	p.P2002T	1.000	135	0%	100	31%	0	-	possibly_damaging(0.477)	tolerated(0.16)	neutral(0.217)	HMMPfam_Cadherin,superfamily_Cadherin-like
DCHS2	54798	genome.wustl.edu	37	4	155191159	155191159	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017639.3	-1	validated	p.S1702Y	0.386	83	0%	41	43.9%	0	-	probably_damaging(0.96)	deleterious(0.04)	deleterious(0.752)	HMMPfam_Cadherin,superfamily_Cadherin-like
DCHS2	54798	genome.wustl.edu	37	4	155241729	155241729	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017639.3	-1	validated	p.I1153L	0.733	374	0%	376	32.7%	0	-	benign(0.004)	tolerated(0.61)	neutral(0.004)	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
DCHS2	54798	genome.wustl.edu	37	4	155242340	155242340	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017639.3	-1	validated	p.S949Y	0.999	214	0%	93	34.4%	0	-	possibly_damaging(0.852)	tolerated(1)	neutral(0.328)	superfamily_Cadherin-like
DCHS2	54798	genome.wustl.edu	37	4	155410666	155410666	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142552.1	-1	validated	p.A614	0.015	79	0%	72	37.5%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PLRG1	5356	genome.wustl.edu	37	4	155465672	155465672	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002669.2	-1	provisional	p.K173N	1.000	405	0%	402	33.1%	26	34.6%	benign(0.244)	tolerated(0.48)	neutral(0.035)	NULL
PLRG1	5356	genome.wustl.edu	37	4	155470047	155470047	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002669.2	-1	provisional	p.S17L	1.000	239	0%	265	36.6%	19	42.1%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
FGA	2243	genome.wustl.edu	37	4	155505388	155505388	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000508.3	-1	reviewed	p.R830M	0.011	123	0%	106	34.9%	0	-	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like
FGA	2243	genome.wustl.edu	37	4	155505901	155505901	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000508.3	-1	reviewed	p.F659C	1.000	60	0%	47	31.9%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like
FGA	2243	genome.wustl.edu	37	4	155507870	155507870	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000508.3	-1	reviewed	p.F237L	0.378	266	0%	225	32%	0	-	benign(0.384)	deleterious(0.01)	deleterious(0.528)	HMMPfam_Fib_alpha
FGA	2243	genome.wustl.edu	37	4	155508783	155508783	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000508.3	-1	reviewed	p.S131P	0.996	327	0%	347	34%	0	-	possibly_damaging(0.63)	deleterious(0.01)	deleterious(0.626)	HMMPfam_Fib_alpha
FGA	2243	genome.wustl.edu	37	4	155510624	155510624	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000508.3	-1	reviewed	p.D49Y	1.000	188	0%	129	33.3%	0	-	probably_damaging(0.964)	deleterious(0)	deleterious(0.851)	HMMPfam_Fib_alpha
FGG	2266	genome.wustl.edu	37	4	155529767	155529767	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021870.2	-1	reviewed	p.W234C	1.000	191	0%	128	32.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like
FGG	2266	genome.wustl.edu	37	4	155530927	155530927	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000407946	-1	known	p.S182Y	0.011	118	0%	69	33.3%	0	-	benign(0.095)	tolerated(0.05)	neutral(0.352)	HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like
FGG	2266	genome.wustl.edu	37	4	155531339	155531339	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021870.2	-1	reviewed	p.E138*	1.000	205	0%	165	28.5%	0	-	-	-	-	NULL
FGG	2266	genome.wustl.edu	37	4	155533728	155533728	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021870.2	-1	reviewed	p.L12I	0.006	153	0%	105	23.8%	0	-	benign(0.086)	deleterious(0)	neutral(0.451)	NULL
RBM46	166863	genome.wustl.edu	37	4	155749198	155749198	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144979.3	+1	validated	p.S527	1.000	190	0%	171	30.4%	0	-	-	-	-	NULL
NPY2R	4887	genome.wustl.edu	37	4	156135785	156135785	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000910.2	+1	provisional	p.L232M	0.998	124	0%	165	21.8%	0	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
MAP9	79884	genome.wustl.edu	37	4	156269046	156269046	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039580.1	-1	validated	p.E611D	0.958	205	0%	210	25.7%	23	39.1%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
MAP9	79884	genome.wustl.edu	37	4	156294597	156294597	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039580.1	-1	validated	p.D58Y	0.996	71	0%	84	31%	2	50%	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	NULL
GUCY1A3	2982	genome.wustl.edu	37	4	156629393	156629393	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000856.4	+1	validated	p.S108Y	0.014	80	0%	61	29.5%	4	75%	possibly_damaging(0.822)	deleterious(0.01)	deleterious(0.717)	NULL
GUCY1B3	2983	genome.wustl.edu	37	4	156715045	156715045	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000857.2	+1	validated	p.Q178P	1.000	65	0%	73	39.7%	4	25%	benign(0.017)	tolerated(0.17)	neutral(0.059)	superfamily_H-NOX domain
GUCY1B3	2983	genome.wustl.edu	37	4	156723458	156723458	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000507146	+1	known	p.I355M	0.000	123	0%	119	37%	0	-	benign(0.019)	-	-	HMMPfam_HNOBA
ASIC5	51802	genome.wustl.edu	37	4	156775387	156775387	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017419.2	-1	reviewed	p.E143*	0.046	179	0%	91	28.6%	0	-	-	-	-	HMMPfam_ASC
GRIA2	2891	genome.wustl.edu	37	4	158262533	158262533	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000826.3	+1	reviewed	p.I654	1.000	269	0%	180	28.3%	0	-	-	-	-	HMMPfam_Lig_chan,HMMSmart_PBPe,superfamily_SSF53850
GRIA2	2891	genome.wustl.edu	37	4	158284073	158284073	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000510854	+1	known	p.E174K	1.000	363	0%	288	25.7%	5	0%	-	-	-	NULL
GRIA2	2891	genome.wustl.edu	37	4	158284179	158284179	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000826.3	+1	reviewed	p.E879K	1.000	172	0%	151	23.2%	3	0%	possibly_damaging(0.556)	deleterious(0.01)	deleterious(0.595)	NULL
FAM198B	51313	genome.wustl.edu	37	4	159048598	159048598	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031700.2	-1	validated	p.I515	1.000	332	0%	300	29%	4	25%	-	-	-	NULL
TMEM144	55314	genome.wustl.edu	37	4	159133911	159133911	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018342.4	+1	validated	p.K31T	1.000	367	0%	386	41.7%	2	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_DUF1632
TMEM144	55314	genome.wustl.edu	37	4	159134020	159134020	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000509278	+1	known	p.N67	0.011	97	0%	73	50.7%	1	100%	-	-	-	NULL
RXFP1	59350	genome.wustl.edu	37	4	159559221	159559221	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021634.2	+1	provisional	p.L345F	1.000	142	0%	124	28.2%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_SM00369,superfamily_L domain-like
RAPGEF2	9693	genome.wustl.edu	37	4	160251128	160251128	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014247.2	+1	validated	p.R262Q	1.000	179	0%	283	31.4%	2	50%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	superfamily_Ras_GEF
RAPGEF2	9693	genome.wustl.edu	37	4	160253611	160253611	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014247.2	+1	validated	p.E472*	1.000	62	0%	105	32.4%	0	-	-	-	-	superfamily_PDZ,superfamily_Ras_GEF
RAPGEF2	9693	genome.wustl.edu	37	4	160259488	160259488	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014247.2	+1	validated	p.D560N	1.000	126	0%	168	33.3%	3	66.6%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	superfamily_Ras_GEF
RAPGEF2	9693	genome.wustl.edu	37	4	160262962	160262962	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014247.2	+1	validated	p.Q766H	1.000	152	0%	132	26.5%	2	50%	benign(0.02)	deleterious(0.02)	neutral(0.384)	HMMPfam_RasGEF,HMMSmart_RasGEF,superfamily_Ras_GEF
FSTL5	56884	genome.wustl.edu	37	4	162307254	162307254	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020116.3	-1	validated	p.A730D	0.917	146	0%	110	34.5%	0	-	possibly_damaging(0.786)	tolerated(0.24)	neutral(0.332)	superfamily_Amine_DH_B_like
FSTL5	56884	genome.wustl.edu	37	4	162307475	162307475	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020116.3	-1	validated	p.H656Q	0.986	133	0%	149	28.2%	0	-	possibly_damaging(0.946)	tolerated(0.08)	deleterious(0.690)	superfamily_Amine_DH_B_like
FSTL5	56884	genome.wustl.edu	37	4	162459435	162459435	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020116.3	-1	validated	p.H399N	1.000	201	0%	249	35.7%	0	-	probably_damaging(0.991)	deleterious(0.02)	deleterious(0.827)	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726
NPY5R	4889	genome.wustl.edu	37	4	164271868	164271868	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006174.2	+1	provisional	p.S148Y	0.954	312	0%	353	33.4%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_7tm_1,superfamily_SSF81321
NPY5R	4889	genome.wustl.edu	37	4	164272125	164272125	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006174.2	+1	provisional	p.V234I	1.000	88	0%	131	38.9%	0	-	possibly_damaging(0.851)	tolerated(0.49)	neutral(0.338)	HMMPfam_7tm_1,superfamily_SSF81321
TKTL2	84076	genome.wustl.edu	37	4	164393463	164393463	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032136.4	-1	validated	p.R475Q	0.877	179	0%	263	43.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Transket_pyr,superfamily_SSF52518
MSMO1	6307	genome.wustl.edu	37	4	166263025	166263025	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006745.3	+1	reviewed	p.R270Q	0.008	193	0%	191	36.6%	39	58.9%	benign(0.086)	tolerated(0.12)	neutral(0.267)	NULL
MIR578	693163	genome.wustl.edu	37	4	166307399	166307399	+	RNA	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000384828	+1	known	NULL	0.016	73	0%	61	29.5%	0	-	-	-	-	-
CPE	1363	genome.wustl.edu	37	4	166418711	166418711	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001873.2	+1	reviewed	p.K460N	1.000	300	0%	314	33.8%	49	59.1%	unknown(0)	tolerated(0.07)	-	HMMSmart_SM00631,superfamily_Carboxypeptidase regulatory domain
TLL1	7092	genome.wustl.edu	37	4	166915548	166915548	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012464.3	+1	reviewed	p.N126T	0.813	134	0%	109	37.6%	0	-	benign(0)	tolerated(0.63)	neutral(0.004)	NULL
TLL1	7092	genome.wustl.edu	37	4	166960515	166960515	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012464.3	+1	reviewed	p.D395N	1.000	337	0.3%	239	25.9%	0	-	probably_damaging(0.988)	tolerated(0.21)	deleterious(0.481)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
TLL1	7092	genome.wustl.edu	37	4	166976333	166976333	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012464.3	+1	reviewed	p.D544Y	1.000	238	0%	256	27.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
TLL1	7092	genome.wustl.edu	37	4	166999140	166999140	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012464.3	+1	reviewed	p.C800*	1.000	129	0%	124	29%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
DDX60	55601	genome.wustl.edu	37	4	169189052	169189052	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017631.5	-1	validated	p.R957C	0.000	265	0%	297	32.7%	0	-	benign(0.002)	tolerated(0.06)	neutral(0.323)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DDX60	55601	genome.wustl.edu	37	4	169201707	169201707	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017631.5	-1	validated	p.K586T	0.056	161	0%	134	40.3%	2	0%	benign(0.003)	tolerated(0.52)	neutral(0.009)	NULL
DDX60	55601	genome.wustl.edu	37	4	169209362	169209362	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017631.5	-1	validated	p.K382N	1.000	110	0%	116	28.4%	1	0%	probably_damaging(0.985)	deleterious(0.01)	deleterious(0.838)	NULL
DDX60L	91351	genome.wustl.edu	37	4	169317246	169317246	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012967.1	-1	validated	p.K1174T	0.003	82	0%	64	40.6%	2	0%	benign(0.013)	tolerated(0.19)	neutral(0.050)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DDX60L	91351	genome.wustl.edu	37	4	169325206	169325206	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012967.1	-1	validated	p.D1089Y	0.000	101	0%	89	23.6%	2	50%	possibly_damaging(0.931)	deleterious(0.05)	deleterious(0.723)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DDX60L	91351	genome.wustl.edu	37	4	169343798	169343798	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012967.1	-1	validated	p.K707N	0.002	298	0%	366	30.6%	0	-	benign(0)	tolerated(0.53)	neutral(0.007)	NULL
DDX60L	91351	genome.wustl.edu	37	4	169362566	169362566	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012967.1	-1	validated	p.E406*	0.023	169	0%	257	30.7%	1	0%	-	-	-	NULL
PALLD	23022	genome.wustl.edu	37	4	169632940	169632940	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016081.3	+1	reviewed	p.T610	0.000	141	0%	213	40.8%	11	27.2%	-	-	-	NULL
NEK1	4750	genome.wustl.edu	37	4	170384532	170384532	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012224.1	-1	validated	p.E789*	1.000	95	0%	39	30.8%	1	0%	-	-	-	NULL
NEK1	4750	genome.wustl.edu	37	4	170429410	170429410	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012224.1	-1	validated	p.R580C	1.000	291	0%	329	32.8%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NEK1	4750	genome.wustl.edu	37	4	170476995	170476995	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012224.1	-1	validated	p.L480M	0.353	201	0%	251	33.1%	0	-	benign(0.002)	tolerated(0.14)	neutral(0.249)	NULL
AADAT	51166	genome.wustl.edu	37	4	171009688	171009688	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016228.3	-1	reviewed	p.S32L	0.964	162	0%	209	36.8%	10	50%	possibly_damaging(0.544)	tolerated(0.1)	deleterious(0.471)	superfamily_PLP-dependent transferases
GALNTL6	442117	genome.wustl.edu	37	4	172735732	172735732	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034845.2	+1	validated	p.M1L	1.000	319	0%	359	29.8%	0	-	benign(0.192)	deleterious(0)	neutral(0.463)	NULL
GALNTL6	442117	genome.wustl.edu	37	4	173730640	173730640	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034845.2	+1	validated	p.L228M	1.000	121	0%	116	35.3%	0	-	possibly_damaging(0.925)	tolerated(0.13)	deleterious(0.626)	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
GALNT7	51809	genome.wustl.edu	37	4	174238815	174238815	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017423.2	+1	reviewed	p.D547Y	1.000	283	0.7%	264	32.2%	10	90%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,superfamily_Ricin B-like lectins
HMGB2	3148	genome.wustl.edu	37	4	174253272	174253272	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130688.1	-1	reviewed	p.E197*	0.997	453	0%	831	37.1%	153	48.3%	-	-	-	NULL
SCRG1	11341	genome.wustl.edu	37	4	174312389	174312389	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007281.2	-1	reviewed	p.F59L	1.000	174	0%	347	34.6%	1	0%	possibly_damaging(0.465)	deleterious(0)	deleterious(0.598)	NULL
MORF4	10934	genome.wustl.edu	37	4	174537479	174537479	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006792.2	-1	validated	p.L106I	0.998	270	0.4%	367	28.9%	0	-	-	-	-	HMMPfam_MRG
HPGD	3248	genome.wustl.edu	37	4	175414339	175414339	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000860.4	-1	reviewed	p.H209N	0.001	289	0%	187	34.2%	4	75%	benign(0)	tolerated(0.54)	neutral(0.007)	superfamily_NAD(P)-bd
ADAM29	11086	genome.wustl.edu	37	4	175897323	175897323	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130703.1	+1	reviewed	p.R216M	0.000	165	0%	179	22.9%	0	-	possibly_damaging(0.886)	deleterious(0.04)	deleterious(0.696)	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
ADAM29	11086	genome.wustl.edu	37	4	175897816	175897816	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130703.1	+1	reviewed	p.E380D	0.000	287	0.3%	394	35.5%	0	-	benign(0.034)	tolerated(0.56)	neutral(0.009)	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
WDR17	116966	genome.wustl.edu	37	4	177041043	177041043	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170710.4	+1	reviewed	p.C135*	1.000	224	0%	239	35.1%	0	-	-	-	-	superfamily_Amine_DH_B_like
WDR17	116966	genome.wustl.edu	37	4	177052800	177052800	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170710.4	+1	reviewed	p.P361T	1.000	484	0%	631	34.9%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	superfamily_Amine_DH_B_like,superfamily_WD40_like
WDR17	116966	genome.wustl.edu	37	4	177067288	177067288	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170710.4	+1	reviewed	p.L582I	0.996	220	0%	246	34.1%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
WDR17	116966	genome.wustl.edu	37	4	177071081	177071081	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170710.4	+1	reviewed	p.S698Y	0.957	163	0%	141	30.5%	0	-	possibly_damaging(0.623)	tolerated(0.21)	neutral(0.261)	NULL
SPATA4	132851	genome.wustl.edu	37	4	177109287	177109287	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144644.2	-1	provisional	p.R263I	0.000	99	0%	130	29.2%	0	-	possibly_damaging(0.852)	tolerated(0.05)	deleterious(0.673)	NULL
SPCS3	60559	genome.wustl.edu	37	4	177245363	177245363	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021928.3	+1	validated	p.K83	1.000	126	0%	75	30.7%	50	44%	-	-	-	HMMPfam_SPC22
VEGFC	7424	genome.wustl.edu	37	4	177609037	177609037	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000280193	-1	known	p.N250T	0.996	156	0%	163	19.6%	21	14.2%	possibly_damaging(0.692)	tolerated(0.08)	deleterious(0.547)	NULL
AGA	175	genome.wustl.edu	37	4	178360778	178360778	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000027.3	-1	reviewed	p.R116W	0.930	254	0%	326	30.4%	32	40.6%	probably_damaging(0.994)	tolerated(0.07)	deleterious(0.771)	HMMPfam_Asparaginase_2,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)
ODZ3	55714	genome.wustl.edu	37	4	183594306	183594306	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080477.1	+1	provisional	p.I420	1.000	162	0%	121	24%	1	0%	-	-	-	NULL
ODZ3	55714	genome.wustl.edu	37	4	183658067	183658067	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080477.1	+1	provisional	p.S1025Y	0.995	225	0%	167	31.7%	1	0%	possibly_damaging(0.773)	deleterious(0.03)	deleterious(0.652)	superfamily_ConA_like_lec_gl
ODZ3	55714	genome.wustl.edu	37	4	183674628	183674628	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080477.1	+1	provisional	p.L1296	0.986	180	0%	300	32%	2	50%	-	-	-	superfamily_ConA_like_lec_gl,superfamily_SSF101898
ODZ3	55714	genome.wustl.edu	37	4	183676319	183676319	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080477.1	+1	provisional	p.A1600V	1.000	172	0%	284	35.6%	1	0%	possibly_damaging(0.807)	deleterious(0.03)	deleterious(0.668)	superfamily_ConA_like_lec_gl,superfamily_SSF63829
ODZ3	55714	genome.wustl.edu	37	4	183714654	183714654	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080477.1	+1	provisional	p.L2277I	1.000	116	0%	186	33.3%	1	0%	possibly_damaging(0.943)	tolerated(0.32)	neutral(0.412)	NULL
ODZ3	55714	genome.wustl.edu	37	4	183714752	183714752	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080477.1	+1	provisional	p.N2309	0.987	232	0%	211	33.6%	4	50%	-	-	-	NULL
LOC100128823	100128823	genome.wustl.edu	37	4	184019201	184019201	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001719637.1	+1	model	p.G119V	0.008	43	0%	62	37.1%	0	-	-	-	-	NULL
WWC2	80014	genome.wustl.edu	37	4	184166691	184166691	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024949.5	+1	validated	p.L242R	1.000	83	0%	82	23.2%	5	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
WWC2	80014	genome.wustl.edu	37	4	184204003	184204003	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024949.5	+1	validated	p.E943*	0.017	140	0%	199	24.6%	4	0%	-	-	-	NULL
CLDN22	53842	genome.wustl.edu	37	4	184240944	184240944	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001111319.1	-1	provisional	p.K143T	0.000	108	0%	153	27.5%	2	50%	benign(0)	tolerated(0.6)	neutral(0.004)	HMMPfam_PMP22_Claudin
TRAPPC11	60684	genome.wustl.edu	37	4	184612498	184612498	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021942.4	+1	validated	p.E641D	0.998	112	0%	218	36.7%	8	37.5%	benign(0)	tolerated(0.8)	neutral(0.001)	NULL
TRAPPC11	60684	genome.wustl.edu	37	4	184615864	184615864	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021942.4	+1	validated	p.C872	1.000	102	0%	126	27.8%	4	0%	-	-	-	NULL
STOX2	56977	genome.wustl.edu	37	4	184930727	184930727	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020225.1	+1	provisional	p.F246V	1.000	56	0%	97	30.9%	0	-	possibly_damaging(0.767)	tolerated(0.12)	deleterious(0.545)	NULL
STOX2	56977	genome.wustl.edu	37	4	184930805	184930805	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020225.1	+1	provisional	p.R272W	1.000	31	0%	41	26.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CASP3	836	genome.wustl.edu	37	4	185553081	185553081	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004346.3	-1	reviewed	p.D107	1.000	162	0%	179	29.1%	14	42.8%	-	-	-	HMMPfam_Peptidase_C14,HMMSmart_SM00115,superfamily_Caspase-like
HELT	391723	genome.wustl.edu	37	4	185941435	185941435	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029887.1	+1	provisional	p.L165I	0.636	30	0%	31	29%	0	-	possibly_damaging(0.827)	tolerated(0.08)	deleterious(0.614)	superfamily_HLH helix-loop-helix DNA-binding domain
KIAA1430	57587	genome.wustl.edu	37	4	186085308	186085308	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020827.1	-1	validated	p.V449A	1.000	178	0%	307	35.8%	6	16.6%	possibly_damaging(0.933)	tolerated(0.08)	deleterious(0.679)	NULL
KIAA1430	57587	genome.wustl.edu	37	4	186112303	186112303	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020827.1	-1	validated	p.F16L	1.000	94	0%	122	23.8%	0	-	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	NULL
SNX25	83891	genome.wustl.edu	37	4	186244739	186244739	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031953.2	+1	validated	p.E348*	1.000	65	0%	90	25.6%	0	-	-	-	-	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam
SNX25	83891	genome.wustl.edu	37	4	186284587	186284587	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031953.2	+1	validated	p.H831N	0.958	237	0%	254	38.6%	14	71.4%	benign(0.002)	tolerated(0.07)	neutral(0.319)	NULL
LRP2BP	55805	genome.wustl.edu	37	4	186298121	186298121	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018409.3	-1	validated	p.R53I	0.914	217	0%	341	34.9%	2	0%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
C4orf47	441054	genome.wustl.edu	37	4	186353356	186353356	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114357.1	+1	predicted	e2+1	1.000	72	0%	134	41%	0	-	-	-	-	-
CCDC110	256309	genome.wustl.edu	37	4	186381384	186381384	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152775.3	-1	validated	p.E119D	0.722	64	0%	79	35.4%	0	-	benign(0.268)	deleterious(0.04)	neutral(0.378)	NULL
PDLIM3	27295	genome.wustl.edu	37	4	186427697	186427697	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014476.3	-1	reviewed	p.G258*	1.000	107	0%	62	29%	24	0%	-	-	-	NULL
SORBS2	8470	genome.wustl.edu	37	4	186559309	186559309	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003603.5	-1	reviewed	p.R277H	1.000	216	0%	264	30.3%	1	100%	unknown(0)	tolerated(0.16)	-	NULL
TLR3	7098	genome.wustl.edu	37	4	187003777	187003777	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003265.2	+1	reviewed	p.L313V	0.015	131	0%	158	36.1%	0	-	benign(0.005)	tolerated(0.59)	neutral(0.004)	superfamily_SSF52058
F11	2160	genome.wustl.edu	37	4	187196992	187196992	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000128.3	+1	reviewed	p.T179	0.000	146	0%	249	31.3%	0	-	-	-	-	HMMSmart_SM00223,PatternScan_APPLE,HMMPfam_PAN_1
F11	2160	genome.wustl.edu	37	4	187197534	187197534	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000128.3	+1	reviewed	p.E249*	0.004	219	0%	269	31.2%	0	-	-	-	-	HMMSmart_SM00223,PatternScan_APPLE,HMMPfam_PAN_1
FAT1	2195	genome.wustl.edu	37	4	187525049	187525049	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005245.3	-1	reviewed	p.A3544V	1.000	132	0%	247	34.8%	16	31.2%	probably_damaging(0.96)	tolerated(1)	neutral(0.403)	superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT1	2195	genome.wustl.edu	37	4	187534368	187534368	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005245.3	-1	reviewed	p.D3120N	1.000	174	0%	184	35.3%	11	63.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT1	2195	genome.wustl.edu	37	4	187539012	187539012	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005245.3	-1	reviewed	p.D2910N	0.998	181	0%	257	31.5%	21	57.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT1	2195	genome.wustl.edu	37	4	187584578	187584578	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005245.3	-1	reviewed	p.S1152Y	1.000	225	0%	290	32.1%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT1	2195	genome.wustl.edu	37	4	187584730	187584730	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005245.3	-1	reviewed	p.S1101	0.001	95	0%	118	39%	6	66.6%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
ZFP42	132625	genome.wustl.edu	37	4	188924891	188924891	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174900.3	+1	validated	p.K310	0.000	48	0%	114	41.2%	0	-	-	-	-	NULL
FRG1	2483	genome.wustl.edu	37	4	190876206	190876206	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004477.2	+1	reviewed	p.S111Y	1.000	153	0%	151	35.1%	53	43.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Actin-crosslinking proteins,HMMPfam_FRG1
TUBB7P	56604	genome.wustl.edu	37	4	190904370	190904370	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020040.3	-1	validated	p.E205K	1.000	80	0%	127	33.1%	0	-	-	-	-	HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like
PLEKHG4B	153478	genome.wustl.edu	37	5	151676	151676	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052909.3	+1	validated	p.E296*	1.000	163	0%	184	36.4%	1	0%	-	-	-	NULL
PLEKHG4B	153478	genome.wustl.edu	37	5	163445	163445	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052909.3	+1	validated	p.F730	0.354	53	0%	67	23.9%	0	-	-	-	-	NULL
SLC9A3	6550	genome.wustl.edu	37	5	485320	485320	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004174.2	-1	validated	p.F234	0.950	188	0%	317	32.2%	0	-	-	-	-	HMMPfam_Na_H_Exchanger
CEP72	55722	genome.wustl.edu	37	5	634012	634012	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018140.3	+1	reviewed	p.S214N	0.070	33	0%	34	32.4%	5	60%	benign(0.002)	tolerated(1)	-	NULL
ZDHHC11	79844	genome.wustl.edu	37	5	825289	825289	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024786.2	-1	validated	p.S338L	0.001	207	0%	386	36%	1	0%	benign(0)	deleterious(0)	neutral(0.445)	NULL
ZDHHC11	79844	genome.wustl.edu	37	5	837517	837517	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024786.2	-1	validated	p.K288T	0.000	476	0%	957	18.8%	0	-	possibly_damaging(0.448)	tolerated(0.2)	neutral(0.196)	NULL
ZDHHC11	79844	genome.wustl.edu	37	5	848659	848659	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024786.2	-1	validated	p.F113	0.994	266	0%	433	15.5%	0	-	-	-	-	NULL
BRD9	65980	genome.wustl.edu	37	5	878568	878568	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023924.4	-1	validated	p.S295	0.050	72	0%	114	27.2%	25	28%	-	-	-	NULL
SLC6A18	348932	genome.wustl.edu	37	5	1225708	1225708	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182632.2	+1	validated	p.G39E	1.000	95	0%	95	38.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SNF
SLC6A18	348932	genome.wustl.edu	37	5	1240715	1240715	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182632.2	+1	validated	p.I305	0.002	119	0%	203	31%	0	-	-	-	-	HMMPfam_SNF
CLPTM1L	81037	genome.wustl.edu	37	5	1331933	1331933	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030782.3	-1	provisional	p.I319	0.984	128	0%	220	32.7%	97	44.3%	-	-	-	HMMPfam_CLPTM1
SLC6A3	6531	genome.wustl.edu	37	5	1441558	1441558	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001044.4	-1	reviewed	p.P112S	1.000	39	0%	61	37.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SNF
LPCAT1	79888	genome.wustl.edu	37	5	1479739	1479739	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024830.3	-1	validated	p.I271	0.776	129	0%	241	34.9%	46	39.1%	-	-	-	superfamily_SSF69593
LPCAT1	79888	genome.wustl.edu	37	5	1489945	1489945	+	Missense_Mutation	SNP	G	G	A	rs189595979	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000475622	-1	known	p.R170C	1.000	148	0%	228	36%	17	35.2%	-	-	-	NULL
LPCAT1	79888	genome.wustl.edu	37	5	1494891	1494891	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000475622	-1	known	p.R135*	0.963	69	0%	92	70.7%	10	50%	-	-	-	NULL
C5orf38	153571	genome.wustl.edu	37	5	2755159	2755159	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000397835	+1	known	p.R117Q	0.000	122	0%	125	35.2%	0	-	unknown(0)	-	-	NULL
IRX1	79192	genome.wustl.edu	37	5	3600767	3600767	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024337.3	+1	validated	p.K453Q	1.000	42	0%	44	25%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
ADAMTS16	170690	genome.wustl.edu	37	5	5146469	5146469	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139056.2	+1	reviewed	p.K134N	0.000	66	0%	62	35.5%	0	-	benign(0.02)	tolerated(0.48)	neutral(0.011)	HMMPfam_Pep_M12B_propep
KIAA0947	23379	genome.wustl.edu	37	5	5441275	5441275	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015325.1	+1	validated	p.S83Y	1.000	87	0%	91	35.2%	1	0%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
KIAA0947	23379	genome.wustl.edu	37	5	5462192	5462192	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015325.1	+1	validated	p.I915	0.000	61	0%	111	36%	0	-	-	-	-	NULL
KIAA0947	23379	genome.wustl.edu	37	5	5462913	5462913	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015325.1	+1	validated	p.L1156M	0.250	234	0%	252	35.3%	4	100%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
KIAA0947	23379	genome.wustl.edu	37	5	5465163	5465163	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015325.1	+1	validated	p.E1906*	0.357	217	0%	358	34.1%	7	14.2%	-	-	-	NULL
ADCY2	108	genome.wustl.edu	37	5	7804718	7804718	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020546.2	+1	reviewed	p.F932L	1.000	96	0%	117	24.8%	2	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase
MTRR	4552	genome.wustl.edu	37	5	7885944	7885944	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024010.2	+1	reviewed	p.I372R	0.096	137	0%	123	33.3%	2	0%	possibly_damaging(0.654)	deleterious(0)	deleterious(0.674)	HMMPfam_FAD_binding_1,superfamily_Riboflavin synthase domain-like
MTRR	4552	genome.wustl.edu	37	5	7900144	7900144	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024010.2	+1	reviewed	p.K717	0.318	107	0%	98	24.5%	6	33.3%	-	-	-	superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain
TAS2R1	50834	genome.wustl.edu	37	5	9629749	9629749	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019599.2	-1	reviewed	p.G132	0.000	64	0%	60	35%	0	-	-	-	-	HMMPfam_TAS2R,superfamily_SSF81321
ANKRD33B	651746	genome.wustl.edu	37	5	10564741	10564741	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000296657	+1	known	p.S54	1.000	26	0%	36	38.9%	0	-	-	-	-	superfamily_ANK
DNAH5	1767	genome.wustl.edu	37	5	13762932	13762932	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001369.2	-1	reviewed	p.E3394K	1.000	110	0%	150	28%	0	-	probably_damaging(0.953)	deleterious(0.01)	deleterious(0.802)	NULL
DNAH5	1767	genome.wustl.edu	37	5	13762974	13762974	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001369.2	-1	reviewed	p.E3380*	1.000	82	0%	110	34.5%	0	-	-	-	-	NULL
DNAH5	1767	genome.wustl.edu	37	5	13811757	13811757	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001369.2	-1	reviewed	p.K2469T	1.000	112	0%	142	32.4%	0	-	benign(0.003)	tolerated(0.31)	neutral(0.027)	NULL
DNAH5	1767	genome.wustl.edu	37	5	13811890	13811890	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001369.2	-1	reviewed	p.R2425C	1.000	77	0%	136	36%	0	-	probably_damaging(0.982)	deleterious(0.03)	deleterious(0.791)	NULL
DNAH5	1767	genome.wustl.edu	37	5	13885212	13885212	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001369.2	-1	reviewed	p.E957K	0.997	206	0%	224	31.2%	0	-	benign(0.001)	tolerated(0.18)	neutral(0.056)	NULL
DNAH5	1767	genome.wustl.edu	37	5	13913992	13913992	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001369.2	-1	reviewed	p.E466K	1.000	294	0%	245	30.6%	0	-	probably_damaging(0.989)	deleterious(0.01)	deleterious(0.845)	HMMPfam_DHC_N1
TRIO	7204	genome.wustl.edu	37	5	14401161	14401161	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007118.2	+1	validated	p.K1568N	1.000	156	0%	216	36.6%	8	37.5%	unknown(0)	deleterious(0.01)	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
TRIO	7204	genome.wustl.edu	37	5	14482807	14482807	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007118.2	+1	validated	p.I2194	0.446	120	0.8%	212	28.8%	10	20%	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
FAM105A	54491	genome.wustl.edu	37	5	14607518	14607518	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019018.2	+1	validated	p.S193L	0.988	359	0%	580	30.7%	2	0%	possibly_damaging(0.731)	tolerated(0.18)	neutral(0.323)	NULL
FAM105A	54491	genome.wustl.edu	37	5	14609098	14609098	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019018.2	+1	validated	p.S290Y	0.294	99	0%	166	31.3%	3	33.3%	possibly_damaging(0.839)	tolerated(0.14)	deleterious(0.570)	NULL
ANKH	56172	genome.wustl.edu	37	5	14745985	14745985	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_054027.4	-1	reviewed	p.F303	0.999	99	0%	136	40.4%	45	0%	-	-	-	HMMPfam_ANKH
LOC402198	402198	genome.wustl.edu	37	5	14961158	14961158	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001716525.1	+1	model	p.D337Y	1.000	28	0%	46	30.4%	0	-	-	-	-	HMMPfam_AIRS_C,superfamily_PurM C-terminal domain-like
ZNF622	90441	genome.wustl.edu	37	5	16453219	16453219	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033414.2	-1	provisional	p.R403	0.344	115	0%	109	31.2%	52	38.4%	-	-	-	NULL
MYO10	4651	genome.wustl.edu	37	5	16672814	16672814	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012334.2	-1	validated	p.L1765V	0.187	178	0%	304	33.9%	20	60%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMSmart_B41
MYO10	4651	genome.wustl.edu	37	5	16701875	16701875	+	Nonsense_Mutation	SNP	C	C	A	rs192068413	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012334.2	-1	validated	p.E877*	0.370	74	0%	120	31.7%	5	20%	-	-	-	NULL
CDH18	1016	genome.wustl.edu	37	5	19503156	19503156	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004934.3	-1	reviewed	p.F525L	1.000	199	0%	243	30.5%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
CDH18	1016	genome.wustl.edu	37	5	19520835	19520835	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004934.3	-1	reviewed	p.V481	1.000	245	0%	232	34.5%	0	-	-	-	-	HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin
CDH18	1016	genome.wustl.edu	37	5	19591169	19591169	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004934.3	-1	reviewed	p.K332N	0.994	105	0%	127	33.9%	0	-	possibly_damaging(0.908)	deleterious(0.04)	deleterious(0.710)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
CDH12	1010	genome.wustl.edu	37	5	21975261	21975261	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004061.3	-1	reviewed	p.D155E	1.000	236	0%	212	27.4%	3	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin
PRDM9	56979	genome.wustl.edu	37	5	23526481	23526481	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020227.2	+1	provisional	p.E428D	0.000	251	0%	373	34.6%	0	-	benign(0.105)	tolerated(0.22)	neutral(0.050)	NULL
PRDM9	56979	genome.wustl.edu	37	5	23526883	23526883	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020227.2	+1	provisional	p.S562R	0.000	158	0.6%	181	35.9%	0	-	benign(0.177)	tolerated(0.17)	neutral(0.075)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
PRDM9	56979	genome.wustl.edu	37	5	23527713	23527713	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020227.2	+1	provisional	p.R839Q	0.461	159	0%	174	28.2%	0	-	unknown(0)	tolerated(0.09)	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
CDH10	1008	genome.wustl.edu	37	5	24488074	24488074	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006727.2	-1	reviewed	p.D689Y	1.000	133	0%	82	29.3%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin_C
CDH10	1008	genome.wustl.edu	37	5	24488112	24488112	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006727.2	-1	reviewed	p.R676M	1.000	133	0%	68	30.9%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin_C
CDH9	1007	genome.wustl.edu	37	5	26885801	26885801	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016279.3	-1	reviewed	p.A602T	0.846	95	1.1%	67	28.4%	0	-	benign(0.003)	tolerated(0.27)	neutral(0.034)	NULL
CDH9	1007	genome.wustl.edu	37	5	26903886	26903886	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016279.3	-1	reviewed	p.L287I	0.937	251	0%	204	35.8%	0	-	benign(0.002)	tolerated(0.56)	neutral(0.006)	HMMPfam_Cadherin,superfamily_Cadherin
CDH9	1007	genome.wustl.edu	37	5	26915896	26915896	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016279.3	-1	reviewed	p.S122Y	1.000	238	0%	170	31.8%	0	-	possibly_damaging(0.946)	deleterious(0)	deleterious(0.835)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
LOC729862	729862	genome.wustl.edu	37	5	28927042	28927042	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_040872.2	+1	model	NULL	0.929	43	0%	80	37.5%	0	-	-	-	-	-
LOC729862	729862	genome.wustl.edu	37	5	28927189	28927189	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_040872.2	+1	model	NULL	1.000	191	0%	288	36.1%	0	-	-	-	-	-
CDH6	1004	genome.wustl.edu	37	5	31316412	31316412	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004932.2	+1	reviewed	p.V496	0.978	122	0%	138	42.8%	1	0%	-	-	-	HMMPfam_Cadherin,superfamily_Cadherin-like
DROSHA	29102	genome.wustl.edu	37	5	31515591	31515591	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013235.4	-1	validated	p.S343Y	1.000	60	0%	76	35.5%	2	0%	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	NULL
DROSHA	29102	genome.wustl.edu	37	5	31521294	31521294	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013235.4	-1	validated	p.R295*	1.000	276	0%	339	31%	6	33.3%	-	-	-	NULL
PDZD2	23037	genome.wustl.edu	37	5	31799559	31799559	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178140.2	+1	reviewed	p.I68	1.000	117	0%	164	34.8%	0	-	-	-	-	superfamily_PDZ domain-like
PDZD2	23037	genome.wustl.edu	37	5	32087470	32087470	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178140.2	+1	reviewed	p.R1306*	0.000	36	0%	96	20.8%	0	-	-	-	-	NULL
PDZD2	23037	genome.wustl.edu	37	5	32088588	32088588	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178140.2	+1	reviewed	p.T1678	0.000	55	0%	124	37.1%	1	0%	-	-	-	NULL
MTMR12	54545	genome.wustl.edu	37	5	32230347	32230347	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040446.1	-1	reviewed	p.R594I	1.000	109	0%	146	32.9%	8	50%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	superfamily_(Phosphotyrosine protein) phosphatases II
MTMR12	54545	genome.wustl.edu	37	5	32233892	32233892	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040446.1	-1	reviewed	p.G554V	0.973	217	0.5%	466	35.2%	8	37.5%	benign(0.15)	tolerated(0.09)	neutral(0.309)	superfamily_(Phosphotyrosine protein) phosphatases II
ZFR	51663	genome.wustl.edu	37	5	32379252	32379252	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016107.3	-1	validated	p.R935Q	1.000	63	0%	115	40.9%	32	46.8%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	HMMPfam_DZF,HMMSmart_DZF
NPR3	4883	genome.wustl.edu	37	5	32789659	32789659	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024563.3	+1	predicted	p.R51I	0.000	145	0.7%	151	27.8%	0	-	possibly_damaging(0.951)	-	-	NULL
ADAMTS12	81792	genome.wustl.edu	37	5	33751444	33751444	+	Nonstop_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000515401	-1	known	p.*233Y	0.001	106	0%	87	29.9%	0	-	-	-	-	NULL
ADAMTS12	81792	genome.wustl.edu	37	5	33881515	33881515	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030955.2	-1	reviewed	p.F66L	0.856	133	0%	159	32.7%	1	0%	benign(0.243)	tolerated(0.13)	neutral(0.277)	HMMPfam_Pep_M12B_propep
RXFP3	51289	genome.wustl.edu	37	5	33938077	33938077	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016568.3	+1	validated	p.S411L	0.996	21	0%	14	35.7%	0	-	benign(0.428)	deleterious(0.02)	deleterious(0.522)	superfamily_SSF81321
RAD1	5810	genome.wustl.edu	37	5	34908989	34908989	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002853.3	-1	reviewed	p.R244W	1.000	105	0%	117	33.3%	27	55.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Rad1,superfamily_DNA clamp
RAD1	5810	genome.wustl.edu	37	5	34914879	34914879	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002853.3	-1	reviewed	p.A40V	1.000	175	0%	335	29.3%	31	41.9%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_DNA clamp
DNAJC21	134218	genome.wustl.edu	37	5	34937525	34937525	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194283.3	+1	validated	p.R178H	1.000	106	0%	161	33.5%	15	86.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DNAJC21	134218	genome.wustl.edu	37	5	34945105	34945105	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194283.3	+1	validated	p.E373*	1.000	93	0%	159	30.2%	11	27.2%	-	-	-	NULL
PRLR	5618	genome.wustl.edu	37	5	35068366	35068366	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000949.4	-1	validated	p.P269	0.977	262	0%	343	35.3%	0	-	-	-	-	NULL
SPEF2	79925	genome.wustl.edu	37	5	35740060	35740060	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024867.3	+1	validated	p.E1035*	1.000	104	0%	130	23.1%	0	-	-	-	-	NULL
SPEF2	79925	genome.wustl.edu	37	5	35771836	35771836	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024867.3	+1	validated	p.K1309	0.719	104	0%	89	39.3%	0	-	-	-	-	NULL
CAPSL	133690	genome.wustl.edu	37	5	35910638	35910638	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042625.1	-1	validated	p.R49	1.000	163	0%	127	37%	10	40%	-	-	-	HMMSmart_SM00054,superfamily_EF-hand
UGT3A1	133688	genome.wustl.edu	37	5	35991231	35991231	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000515801	-1	known	p.E38*	0.003	151	0%	165	32.1%	0	-	-	-	-	NULL
LMBRD2	92255	genome.wustl.edu	37	5	36114613	36114613	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007527.1	-1	validated	p.S518F	1.000	103	0%	69	36.2%	1	0%	possibly_damaging(0.948)	deleterious(0)	deleterious(0.836)	HMMPfam_LMBR1
SLC1A3	6507	genome.wustl.edu	37	5	36679902	36679902	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004172.4	+1	reviewed	p.P345H	1.000	174	0%	246	24.4%	4	25%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_SDF
NIPBL	25836	genome.wustl.edu	37	5	36955621	36955621	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133433.3	+1	reviewed	p.K38Q	1.000	248	0%	368	31.2%	5	40%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
NIPBL	25836	genome.wustl.edu	37	5	37000610	37000610	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133433.3	+1	reviewed	p.R1147Q	1.000	196	0%	177	32.8%	3	33.3%	possibly_damaging(0.914)	deleterious(0.03)	deleterious(0.730)	superfamily_ARM repeat
NIPBL	25836	genome.wustl.edu	37	5	37017256	37017256	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133433.3	+1	reviewed	p.L1638	1.000	94	0%	124	40.3%	6	16.6%	-	-	-	superfamily_ARM repeat
NIPBL	25836	genome.wustl.edu	37	5	37017261	37017261	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133433.3	+1	reviewed	p.K1639	1.000	99	0%	122	30.3%	6	83.3%	-	-	-	superfamily_ARM repeat
NIPBL	25836	genome.wustl.edu	37	5	37046234	37046234	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133433.3	+1	reviewed	p.L2174	1.000	140	0%	198	30.8%	6	50%	-	-	-	superfamily_ARM repeat
C5orf42	65250	genome.wustl.edu	37	5	37148344	37148344	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023073.3	-1	predicted	p.F1644L	0.248	329	0%	432	35.2%	1	100%	benign(0)	tolerated(1)	-	NULL
C5orf42	65250	genome.wustl.edu	37	5	37169033	37169033	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023073.3	-1	predicted	p.P1245T	0.898	281	0%	530	34.7%	1	0%	benign(0.026)	tolerated(0.31)	neutral(0.028)	NULL
C5orf42	65250	genome.wustl.edu	37	5	37173939	37173939	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023073.3	-1	predicted	p.R910I	0.000	312	0%	534	30.5%	0	-	possibly_damaging(0.836)	tolerated(0.08)	deleterious(0.619)	NULL
C5orf42	65250	genome.wustl.edu	37	5	37181007	37181007	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023073.3	-1	predicted	p.G722E	0.000	103	0%	126	30.2%	1	100%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	NULL
C5orf42	65250	genome.wustl.edu	37	5	37183288	37183288	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023073.3	-1	predicted	p.S546	0.000	153	0%	239	35.1%	1	0%	-	-	-	NULL
C5orf42	65250	genome.wustl.edu	37	5	37231003	37231003	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000508244	-1	known	p.E363*	1.000	124	0%	232	27.2%	0	-	-	-	-	NULL
C5orf42	65250	genome.wustl.edu	37	5	37243146	37243146	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000508244	-1	known	p.R216W	1.000	73	0%	138	31.9%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
WDR70	55100	genome.wustl.edu	37	5	37605199	37605199	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018034.2	+1	provisional	p.K317N	1.000	117	0%	144	31.2%	15	33.3%	probably_damaging(0.996)	deleterious(0.03)	deleterious(0.826)	superfamily_WD40_like
EGFLAM	133584	genome.wustl.edu	37	5	38407018	38407018	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152403.2	+1	validated	p.S306Y	0.110	304	0%	414	28.5%	2	0%	benign(0)	tolerated(0.26)	neutral(0.034)	NULL
EGFLAM	133584	genome.wustl.edu	37	5	38431286	38431286	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152403.2	+1	validated	p.D688Y	1.000	171	0.6%	295	31.2%	9	0%	possibly_damaging(0.474)	tolerated(0.22)	neutral(0.199)	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2
LIFR	3977	genome.wustl.edu	37	5	38489288	38489288	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127671.1	-1	reviewed	p.K743Q	1.000	173	0%	202	22.3%	0	-	probably_damaging(1)	tolerated(0.16)	deleterious(0.559)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
LIFR	3977	genome.wustl.edu	37	5	38527391	38527391	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127671.1	-1	reviewed	p.R88H	0.000	148	0%	71	26.8%	0	-	benign(0)	tolerated(1)	-	HMMSmart_SM00060,superfamily_Fibronectin type III
OSMR	9180	genome.wustl.edu	37	5	38923338	38923338	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003999.2	+1	reviewed	p.G618R	1.000	198	0%	175	30.3%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
OSMR	9180	genome.wustl.edu	37	5	38933298	38933298	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003999.2	+1	reviewed	p.E898*	0.002	68	0%	72	33.3%	4	0%	-	-	-	NULL
OSMR	9180	genome.wustl.edu	37	5	38933426	38933426	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003999.2	+1	reviewed	p.P940	0.000	129	0%	117	19.7%	4	0%	-	-	-	NULL
RICTOR	253260	genome.wustl.edu	37	5	38950183	38950183	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152756.3	-1	validated	p.S1256I	1.000	175	0%	57	33.3%	0	-	possibly_damaging(0.929)	deleterious(0)	deleterious(0.821)	superfamily_ARM repeat
RICTOR	253260	genome.wustl.edu	37	5	38950648	38950648	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152756.3	-1	validated	p.S1101L	1.000	292	0%	184	34.2%	1	100%	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	superfamily_ARM repeat
RICTOR	253260	genome.wustl.edu	37	5	38975689	38975689	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152756.3	-1	validated	p.R280Q	1.000	210	0%	214	30.4%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	superfamily_ARM repeat
RICTOR	253260	genome.wustl.edu	37	5	38982001	38982001	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152756.3	-1	validated	p.R241*	1.000	122	0%	141	34%	0	-	-	-	-	superfamily_ARM repeat
C9	735	genome.wustl.edu	37	5	39311458	39311458	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001737.3	-1	reviewed	p.K298E	1.000	240	0.4%	166	33.1%	0	-	probably_damaging(0.989)	tolerated(0.09)	deleterious(0.736)	HMMPfam_MACPF,HMMSmart_MACPF
C9	735	genome.wustl.edu	37	5	39316028	39316028	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001737.3	-1	reviewed	p.S240Y	0.007	293	0%	233	27.9%	0	-	possibly_damaging(0.885)	deleterious(0.01)	deleterious(0.752)	NULL
DAB2	1601	genome.wustl.edu	37	5	39394413	39394413	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001343.2	-1	validated	p.E4*	1.000	299	0%	374	34.5%	1	0%	-	-	-	NULL
LOC100127944	100127944	genome.wustl.edu	37	5	40681473	40681473	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001717341.2	-1	model	p.E235K	1.000	26	0%	37	48.6%	1	0%	-	-	-	NULL
TTC33	23548	genome.wustl.edu	37	5	40746976	40746976	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012382.2	-1	validated	p.E49*	1.000	136	0%	189	34.9%	4	50%	-	-	-	NULL
PRKAA1	5562	genome.wustl.edu	37	5	40762927	40762927	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206907.3	-1	reviewed	p.E560*	1.000	87	0%	159	27%	4	0%	-	-	-	NULL
CARD6	84674	genome.wustl.edu	37	5	40852302	40852302	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032587.3	+1	reviewed	p.L290M	1.000	121	0%	139	27.3%	0	-	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	NULL
CARD6	84674	genome.wustl.edu	37	5	40852688	40852688	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032587.3	+1	reviewed	p.I418	0.055	77	0%	129	35.7%	0	-	-	-	-	NULL
C7	730	genome.wustl.edu	37	5	40947712	40947712	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000587.2	+1	reviewed	p.Q249H	0.001	154	0%	132	33.3%	0	-	benign(0)	tolerated(0.4)	neutral(0.016)	HMMPfam_MACPF,HMMSmart_MACPF
C7	730	genome.wustl.edu	37	5	40958215	40958215	+	Missense_Mutation	SNP	G	G	T	rs150696042	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000587.2	+1	reviewed	p.E447D	1.000	286	0%	387	31%	0	-	probably_damaging(0.998)	tolerated(0.1)	deleterious(0.761)	HMMPfam_MACPF,HMMSmart_MACPF
HEATR7B2	133558	genome.wustl.edu	37	5	41005639	41005639	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173489.4	-1	validated	p.F1286L	1.000	143	0%	136	37.5%	0	-	possibly_damaging(0.94)	tolerated(1)	neutral(0.385)	superfamily_ARM repeat
HEATR7B2	133558	genome.wustl.edu	37	5	41010071	41010071	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173489.4	-1	validated	p.M1082I	0.969	221	0%	327	33.9%	0	-	benign(0.431)	tolerated(0.32)	neutral(0.165)	superfamily_ARM repeat
HEATR7B2	133558	genome.wustl.edu	37	5	41018885	41018885	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173489.4	-1	validated	p.L861I	1.000	248	0%	284	28.5%	0	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	superfamily_ARM repeat
HEATR7B2	133558	genome.wustl.edu	37	5	41058294	41058294	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173489.4	-1	validated	p.I209	0.004	132	0%	123	35%	0	-	-	-	-	NULL
HEATR7B2	133558	genome.wustl.edu	37	5	41065549	41065549	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173489.4	-1	validated	p.S82F	1.000	142	0%	147	31.3%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
C6	729	genome.wustl.edu	37	5	41142995	41142995	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000065.2	-1	reviewed	p.E913*	0.830	395	0%	252	28.6%	1	0%	-	-	-	HMMSmart_FIMAC
C6	729	genome.wustl.edu	37	5	41160420	41160420	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000065.2	-1	reviewed	p.K503T	0.984	275	0%	217	31.8%	0	-	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	HMMPfam_MACPF,HMMSmart_MACPF
OXCT1	5019	genome.wustl.edu	37	5	41807445	41807445	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000436.3	-1	reviewed	p.E276D	0.994	324	0%	162	22.8%	13	23%	benign(0.023)	tolerated(0.07)	neutral(0.320)	superfamily_SSF100950
GHR	2690	genome.wustl.edu	37	5	42695060	42695060	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000163.2	+1	reviewed	p.D103G	1.000	357	0%	422	32.5%	0	-	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	superfamily_Fibronectin type III
GHR	2690	genome.wustl.edu	37	5	42719346	42719346	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000163.2	+1	reviewed	p.P579	0.187	185	0%	320	35.9%	0	-	-	-	-	NULL
ZNF131	7690	genome.wustl.edu	37	5	43161997	43161997	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003432.1	+1	validated	p.F306V	1.000	24	0%	65	43.1%	9	55.5%	possibly_damaging(0.915)	tolerated(0.51)	neutral(0.376)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
FGF10	2255	genome.wustl.edu	37	5	44388500	44388500	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004465.1	-1	reviewed	p.N95	0.997	279	0%	337	34.4%	1	0%	-	-	-	HMMPfam_FGF,HMMSmart_FGF,superfamily_Cytok_IL1_like
HCN1	348980	genome.wustl.edu	37	5	45645349	45645349	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021072.2	-1	validated	p.L263I	1.000	94	0%	56	44.6%	0	-	possibly_damaging(0.837)	deleterious(0.01)	deleterious(0.725)	HMMPfam_Ion_trans,superfamily_SSF81324
EMB	133418	genome.wustl.edu	37	5	49706739	49706739	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198449.2	-1	reviewed	p.K148N	0.758	100	0%	53	32.1%	2	0%	possibly_damaging(0.824)	tolerated(0.44)	neutral(0.325)	HMMSmart_SM00409,superfamily_Immunoglobulin
PARP8	79668	genome.wustl.edu	37	5	50074425	50074425	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024615.3	+1	validated	p.R204Q	1.000	132	0%	100	31%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
ISL1	3670	genome.wustl.edu	37	5	50680390	50680390	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002202.2	+1	reviewed	p.S15Y	1.000	134	0%	253	32.4%	0	-	probably_damaging(0.957)	deleterious(0)	deleterious(0.845)	superfamily_Glucocorticoid receptor-like (DNA-binding domain)
ITGA2	3673	genome.wustl.edu	37	5	52367767	52367767	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002203.3	+1	reviewed	e18-1	1.000	334	0%	169	29%	0	-	-	-	-	-
FST	10468	genome.wustl.edu	37	5	52778849	52778849	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013409.1	+1	reviewed	p.L75	0.992	102	0%	126	37.3%	1	0%	-	-	-	HMMPfam_PRKCSH
NDUFS4	4724	genome.wustl.edu	37	5	52979044	52979044	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002495.2	+1	reviewed	p.T174K	1.000	181	0%	127	27.6%	64	42.1%	possibly_damaging(0.949)	deleterious(0)	deleterious(0.838)	NULL
SNX18	112574	genome.wustl.edu	37	5	53814535	53814535	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052870.2	+1	reviewed	p.F251	1.000	41	0%	61	27.9%	2	50%	-	-	-	NULL
GZMK	3003	genome.wustl.edu	37	5	54327243	54327243	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002104.2	+1	reviewed	p.S139A	0.000	126	0%	143	26.6%	7	0%	benign(0)	tolerated(0.48)	neutral(0.011)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
CDC20B	166979	genome.wustl.edu	37	5	54424248	54424248	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152623.2	-1	validated	e7+1	1.000	113	0%	130	30.8%	0	-	-	-	-	-
SKIV2L2	23517	genome.wustl.edu	37	5	54640443	54640443	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015360.4	+1	validated	p.E334*	1.000	157	0%	186	24.2%	6	0%	-	-	-	superfamily_SSF52540
DDX4	54514	genome.wustl.edu	37	5	55086415	55086415	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024415.2	+1	validated	p.R395I	1.000	212	0%	227	26%	0	-	probably_damaging(0.971)	deleterious(0)	deleterious(0.857)	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
DDX4	54514	genome.wustl.edu	37	5	55094264	55094264	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024415.2	+1	validated	p.E494*	1.000	359	0%	505	35%	0	-	-	-	-	HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
IL31RA	133396	genome.wustl.edu	37	5	55164730	55164730	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139017.4	+1	validated	p.R89I	0.676	114	0%	146	32.9%	0	-	possibly_damaging(0.901)	tolerated(0.4)	neutral(0.373)	HMMSmart_FN3,superfamily_FN_III-like
IL31RA	133396	genome.wustl.edu	37	5	55178995	55178995	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139017.4	+1	validated	p.R193L	0.302	130	0%	212	25.5%	0	-	probably_damaging(0.963)	deleterious(0)	deleterious(0.850)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
IL6ST	3572	genome.wustl.edu	37	5	55259227	55259227	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002184.2	-1	reviewed	p.K256Q	1.000	195	0%	260	36.5%	4	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
ANKRD55	79722	genome.wustl.edu	37	5	55479342	55479342	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024669.2	-1	validated	p.E60*	1.000	96	0%	126	38.9%	0	-	-	-	-	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
MAP3K1	4214	genome.wustl.edu	37	5	56167795	56167795	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005921.1	+1	validated	p.E454*	1.000	195	0%	262	35.9%	4	0%	-	-	-	HMMSmart_RING,superfamily_SSF57850
GPBP1	65056	genome.wustl.edu	37	5	56546911	56546911	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127235.2	+1	validated	p.R388Q	0.976	125	0%	206	24.8%	80	46.2%	benign(0.059)	tolerated(0.29)	neutral(0.033)	NULL
ACTBL2	345651	genome.wustl.edu	37	5	56777690	56777690	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017992.2	-1	validated	p.S282Y	0.994	123	0%	193	30.1%	0	-	possibly_damaging(0.781)	-	-	HMMPfam_Actin,HMMSmart_SM00268,superfamily_Actin-like ATPase domain
GAPT	202309	genome.wustl.edu	37	5	57790546	57790546	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152687.2	+1	provisional	p.F61L	0.001	95	0%	112	39.3%	0	-	benign(0)	tolerated(1)	-	NULL
RAB3C	115827	genome.wustl.edu	37	5	58147070	58147070	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138453.2	+1	provisional	p.C192	0.982	165	0%	140	30%	0	-	-	-	-	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540
PDE4D	5144	genome.wustl.edu	37	5	58270599	58270599	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001104631.1	-1	validated	p.E774	1.000	241	0%	137	41.6%	5	60%	-	-	-	NULL
ELOVL7	79993	genome.wustl.edu	37	5	60063694	60063694	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001104558.1	-1	validated	p.R98*	0.989	125	0%	206	35%	6	33.3%	-	-	-	HMMPfam_ELO
C5orf43	643155	genome.wustl.edu	37	5	60455812	60455812	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001048249.3	-1	validated	p.E63*	1.000	476	0.2%	854	27.5%	36	19.4%	-	-	-	NULL
ZSWIM6	57688	genome.wustl.edu	37	5	60835465	60835465	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020928.1	+1	provisional	p.K861T	1.000	224	0%	319	35.1%	15	53.3%	benign(0.19)	tolerated(0.21)	neutral(0.062)	NULL
KIF2A	3796	genome.wustl.edu	37	5	61643985	61643985	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098511.1	+1	validated	p.K90N	1.000	99	0%	162	32.7%	10	30%	possibly_damaging(0.946)	tolerated(0.43)	neutral(0.404)	NULL
KIF2A	3796	genome.wustl.edu	37	5	61677078	61677078	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098511.1	+1	validated	p.R716Q	1.000	158	0%	253	32%	28	57.1%	possibly_damaging(0.62)	tolerated(0.29)	neutral(0.245)	NULL
DIMT1	27292	genome.wustl.edu	37	5	61686778	61686778	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014473.2	-1	validated	p.K275T	1.000	280	0%	439	32.8%	18	27.7%	benign(0.386)	tolerated(0.45)	neutral(0.136)	HMMPfam_RrnaAD,superfamily_SSF53335
DIMT1	27292	genome.wustl.edu	37	5	61687823	61687823	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000506390	-1	known	p.A268V	0.000	26	0.000	8	0.500	1	0%	benign(0.146)	tolerated(0.29)	neutral(0.042)	HMMPfam_RrnaAD
IPO11	51194	genome.wustl.edu	37	5	61778972	61778972	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134779.1	+1	validated	p.L331	0.999	190	0%	225	36%	13	46.1%	-	-	-	superfamily_ARM repeat
IPO11	51194	genome.wustl.edu	37	5	61811214	61811214	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134779.1	+1	validated	e20-1	1.000	181	0%	244	29.9%	0	-	-	-	-	-
LRRC70	100130733	genome.wustl.edu	37	5	61875347	61875347	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181506.4	+1	validated	p.E28*	0.012	125	0%	113	34.5%	0	-	-	-	-	superfamily_SSF52058
HTR1A	3350	genome.wustl.edu	37	5	63256545	63256545	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000524.2	-1	validated	p.K334N	1.000	96	0%	89	30.3%	0	-	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
HTR1A	3350	genome.wustl.edu	37	5	63256817	63256817	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000524.2	-1	validated	p.A244T	0.000	36	0%	42	33.3%	0	-	benign(0)	tolerated(1)	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
RNF180	285671	genome.wustl.edu	37	5	63507919	63507919	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113561.1	+1	validated	p.N55H	0.039	153	0%	118	37.3%	1	0%	possibly_damaging(0.648)	deleterious(0.04)	deleterious(0.577)	NULL
CENPK	64105	genome.wustl.edu	37	5	64850656	64850656	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022145.3	-1	validated	p.E27K	0.999	466	0%	571	32.7%	9	55.5%	benign(0.001)	deleterious(0.03)	neutral(0.364)	NULL
PPWD1	23398	genome.wustl.edu	37	5	64883145	64883145	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015342.2	+1	validated	p.R621S	1.000	144	0%	145	24.1%	42	35.7%	benign(0.228)	tolerated(0.32)	neutral(0.046)	HMMPfam_Pro_isomerase,superfamily_CSA_PPIase
ERBB2IP	55914	genome.wustl.edu	37	5	65307896	65307896	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018695.2	+1	reviewed	p.E109D	1.000	105	0%	110	38.2%	1	0%	possibly_damaging(0.796)	tolerated(0.19)	neutral(0.348)	HMMPfam_LRR_1,superfamily_SSF52058
SREK1	140890	genome.wustl.edu	37	5	65465923	65465923	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077199.1	+1	validated	p.R349H	1.000	84	0%	104	38.5%	16	31.2%	unknown(0)	deleterious(0.02)	-	superfamily_SSF54928
MAST4	375449	genome.wustl.edu	37	5	66461336	66461336	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015183.2	+1	validated	p.S1921Y	0.060	58	0%	50	36%	1	100%	possibly_damaging(0.887)	deleterious(0)	deleterious(0.791)	NULL
ENSG00000248664	0	genome.wustl.edu	37	5	68411231	68411231	+	Splice_Site	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000504129	-1	known	NULL	1.000	183	0%	368	38.6%	22	45.4%	-	-	-	-
CCNB1	891	genome.wustl.edu	37	5	68470862	68470862	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031966.2	+1	reviewed	p.K288N	1.000	139	0%	284	33.8%	115	46.9%	benign(0.261)	tolerated(0.35)	neutral(0.048)	HMMSmart_CYCLIN,HMMPfam_Cyclin_N,superfamily_Cyclin_like
MRPS36	92259	genome.wustl.edu	37	5	68513659	68513659	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033281.5	+1	validated	p.M1I	1.000	88	0%	163	35%	29	44.8%	benign(0.278)	deleterious(0)	deleterious(0.475)	NULL
CDK7	1022	genome.wustl.edu	37	5	68531277	68531277	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001799.3	+1	validated	p.K41N	1.000	231	0%	513	34.5%	37	43.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
CDK7	1022	genome.wustl.edu	37	5	68551328	68551328	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001799.3	+1	validated	p.V90	1.000	115	0%	179	33.5%	39	43.5%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
CCDC125	202243	genome.wustl.edu	37	5	68581169	68581169	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176816.3	-1	validated	p.D409Y	1.000	95	0%	181	28.2%	8	37.5%	-	-	-	NULL
TAF9	6880	genome.wustl.edu	37	5	68661297	68661297	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001015892.1	-1	validated	p.D90Y	1.000	168	0%	265	38.1%	34	41.1%	possibly_damaging(0.768)	deleterious(0)	deleterious(0.730)	HMMPfam_TFIID-31kDa
RAD17	5884	genome.wustl.edu	37	5	68680680	68680680	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133339.1	+1	reviewed	p.L200I	1.000	166	0%	314	27.7%	11	27.2%	benign(0.385)	deleterious(0.01)	deleterious(0.528)	HMMPfam_Rad17,superfamily_P-loop containing nucleoside triphosphate hydrolases
RAD17	5884	genome.wustl.edu	37	5	68687709	68687709	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133339.1	+1	reviewed	p.A364D	0.208	53	0%	62	25.8%	11	45.4%	benign(0.025)	tolerated(0.1)	neutral(0.287)	HMMPfam_Rad17
RAD17	5884	genome.wustl.edu	37	5	68687829	68687829	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133339.1	+1	reviewed	p.L404R	0.996	41	0%	57	29.8%	6	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Rad17
RAD17	5884	genome.wustl.edu	37	5	68689268	68689268	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133339.1	+1	reviewed	p.D466Y	1.000	141	0%	239	35.1%	12	41.6%	possibly_damaging(0.885)	tolerated(0.48)	neutral(0.356)	HMMPfam_Rad17
BDP1	55814	genome.wustl.edu	37	5	70805954	70805954	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018429.2	+1	reviewed	p.L1012S	0.969	64	0%	151	28.5%	0	-	benign(0.018)	tolerated(0.37)	neutral(0.019)	NULL
BDP1	55814	genome.wustl.edu	37	5	70806542	70806542	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018429.2	+1	reviewed	p.S1208L	0.000	90	0%	152	32.2%	1	100%	benign(0.2)	tolerated(0.27)	neutral(0.053)	NULL
BDP1	55814	genome.wustl.edu	37	5	70820040	70820040	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018429.2	+1	reviewed	p.E1888*	1.000	142	0%	202	35.6%	5	60%	-	-	-	NULL
MAP1B	4131	genome.wustl.edu	37	5	71490312	71490312	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005909.3	+1	validated	p.S377I	0.990	91	0%	170	30.6%	0	-	possibly_damaging(0.671)	tolerated(0.14)	deleterious(0.487)	NULL
MAP1B	4131	genome.wustl.edu	37	5	71491142	71491142	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005909.3	+1	validated	p.E654*	1.000	205	0%	491	34.6%	1	100%	-	-	-	NULL
MAP1B	4131	genome.wustl.edu	37	5	71491646	71491646	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005909.3	+1	validated	p.E822*	1.000	29	0%	30	53.3%	0	-	-	-	-	NULL
MAP1B	4131	genome.wustl.edu	37	5	71492420	71492420	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005909.3	+1	validated	p.E1080*	0.998	144	0%	243	31.3%	5	0%	-	-	-	NULL
MAP1B	4131	genome.wustl.edu	37	5	71492903	71492903	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005909.3	+1	validated	p.D1241Y	0.998	99	0%	127	33.9%	0	-	unknown(0)	deleterious(0.04)	-	NULL
MAP1B	4131	genome.wustl.edu	37	5	71493046	71493046	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005909.3	+1	validated	p.V1288	0.966	94	0%	90	21.1%	0	-	-	-	-	NULL
MAP1B	4131	genome.wustl.edu	37	5	71493698	71493698	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005909.3	+1	validated	p.D1506Y	1.000	174	0%	196	26.5%	3	0%	unknown(0)	deleterious(0)	-	NULL
PTCD2	79810	genome.wustl.edu	37	5	71630912	71630912	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024754.3	+1	validated	p.G179D	1.000	115	0%	207	31.4%	2	50%	possibly_damaging(0.594)	tolerated(0.06)	deleterious(0.527)	HMMPfam_PPR
TNPO1	3842	genome.wustl.edu	37	5	72168537	72168537	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002270.3	+1	reviewed	p.S223Y	1.000	264	0%	340	36.2%	7	71.4%	benign(0.003)	deleterious(0.02)	neutral(0.383)	HMMPfam_HEAT,superfamily_ARM repeat
TNPO1	3842	genome.wustl.edu	37	5	72171523	72171523	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002270.3	+1	reviewed	p.R254*	1.000	161	0%	195	28.2%	11	9%	-	-	-	HMMPfam_HEAT,superfamily_ARM repeat
RGNEF	64283	genome.wustl.edu	37	5	73205357	73205357	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080479.2	+1	reviewed	p.R1428C	0.912	15	0%	17	47.1%	3	100%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
FAM169A	26049	genome.wustl.edu	37	5	74096822	74096822	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015566.1	-1	validated	p.R329Q	0.960	120	0%	163	27%	1	0%	probably_damaging(0.987)	tolerated(0.16)	deleterious(0.496)	NULL
GCNT4	51301	genome.wustl.edu	37	5	74324875	74324875	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016591.2	-1	validated	p.D330Y	1.000	81	0%	72	38.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Branch
ANKRD31	256006	genome.wustl.edu	37	5	74400131	74400131	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000274361	-1	known	p.K1694N	0.997	101	0%	74	28.4%	0	-	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	NULL
ANKRD31	256006	genome.wustl.edu	37	5	74400862	74400862	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000274361	-1	known	p.E1451*	0.064	81	0%	92	32.6%	1	100%	-	-	-	NULL
ANKRD31	256006	genome.wustl.edu	37	5	74441965	74441965	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000274361	-1	known	p.E1091*	0.358	193	0%	135	33.3%	0	-	-	-	-	superfamily_ANK
ANKRD31	256006	genome.wustl.edu	37	5	74442011	74442011	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000274361	-1	known	p.I1075M	0.002	159	0%	95	45.3%	0	-	benign(0.09)	deleterious(0)	neutral(0.451)	superfamily_ANK
ANKRD31	256006	genome.wustl.edu	37	5	74489337	74489337	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000274361	-1	known	p.K366T	0.002	163	0%	137	35.8%	0	-	benign(0.277)	deleterious(0)	deleterious(0.474)	NULL
ANKRD31	256006	genome.wustl.edu	37	5	74491918	74491918	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000274361	-1	known	p.E185D	0.354	126	0%	108	24.1%	0	-	benign(0.146)	deleterious(0)	neutral(0.457)	NULL
HMGCR	3156	genome.wustl.edu	37	5	74655086	74655086	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000859.2	+1	reviewed	p.N750S	1.000	132	0%	103	35.9%	44	54.5%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_HMG-CoA_red,superfamily_Substrate-binding domain of HMG-CoA reductase
POC5	134359	genome.wustl.edu	37	5	74981129	74981129	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099271.1	-1	validated	p.S437L	0.074	198	0%	280	35%	12	25%	benign(0.01)	tolerated(0.27)	neutral(0.034)	NULL
POC5	134359	genome.wustl.edu	37	5	74998536	74998536	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099271.1	-1	validated	p.S136Y	0.261	241	0%	432	31.5%	3	33.3%	probably_damaging(0.995)	tolerated(0.08)	deleterious(0.758)	NULL
SV2C	22987	genome.wustl.edu	37	5	75427717	75427717	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014979.1	+1	provisional	p.R48W	1.000	239	0%	297	34.7%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_MFS_gen_substrate_transporter
IQGAP2	10788	genome.wustl.edu	37	5	75885476	75885476	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006633.2	+1	validated	p.K188T	1.000	145	0%	216	25.9%	0	-	possibly_damaging(0.46)	deleterious(0.01)	deleterious(0.556)	superfamily_Calponin-homology domain CH-domain
IQGAP2	10788	genome.wustl.edu	37	5	75954443	75954443	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006633.2	+1	validated	p.L827R	1.000	109	0%	225	31.6%	3	0%	probably_damaging(0.991)	deleterious(0.02)	deleterious(0.827)	NULL
IQGAP2	10788	genome.wustl.edu	37	5	75970488	75970488	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006633.2	+1	validated	p.L1161F	1.000	109	0%	123	32.5%	2	0%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	HMMSmart_SM00323,superfamily_GTPase activation domain GAP
IQGAP2	10788	genome.wustl.edu	37	5	75991325	75991325	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006633.2	+1	validated	p.S1347Y	1.000	76	0%	107	33.6%	2	0%	possibly_damaging(0.816)	tolerated(0.15)	deleterious(0.549)	NULL
F2R	2149	genome.wustl.edu	37	5	76029028	76029028	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001992.3	+1	reviewed	p.F326L	0.998	169	0%	259	32.4%	18	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
S100Z	170591	genome.wustl.edu	37	5	76173562	76173562	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130772.3	+1	validated	p.E69K	1.000	264	0%	458	37.6%	0	-	benign(0.02)	tolerated(0.43)	neutral(0.014)	PatternScan_S100_CABP,HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand
AGGF1	55109	genome.wustl.edu	37	5	76331366	76331366	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018046.3	+1	validated	p.D105A	1.000	99	0%	97	33%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
AGGF1	55109	genome.wustl.edu	37	5	76344787	76344787	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018046.3	+1	validated	p.R447Q	0.997	150	0%	167	33.5%	16	50%	possibly_damaging(0.657)	tolerated(0.31)	neutral(0.259)	HMMPfam_FHA,HMMSmart_SM00240,superfamily_SMAD/FHA domain
AGGF1	55109	genome.wustl.edu	37	5	76358896	76358896	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018046.3	+1	validated	p.R655Q	0.057	143	0%	155	36.8%	38	50%	benign(0.027)	tolerated(0.57)	neutral(0.007)	HMMPfam_G-patch,HMMSmart_SM00443
PDE8B	8622	genome.wustl.edu	37	5	76709015	76709015	+	Missense_Mutation	SNP	C	C	T	rs185733307	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003719.2	+1	validated	p.R598W	1.000	340	0.3%	467	34.3%	0	-	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	superfamily_HD-domain/PDEase-like
WDR41	55255	genome.wustl.edu	37	5	76729009	76729009	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018268.2	-1	validated	p.R444I	0.808	182	0%	158	22.8%	17	47%	benign(0.027)	deleterious(0.05)	neutral(0.347)	NULL
AP3B1	8546	genome.wustl.edu	37	5	77423982	77423982	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003664.3	-1	reviewed	p.R614G	1.000	95	0%	62	27.4%	13	46.1%	probably_damaging(0.996)	tolerated(0.35)	deleterious(0.482)	superfamily_ARM repeat
DMGDH	29958	genome.wustl.edu	37	5	78338288	78338288	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013391.2	-1	reviewed	p.L337	1.000	100	0%	150	36.7%	0	-	-	-	-	HMMPfam_DAO,superfamily_FAD/NAD(P)-binding domain,superfamily_FAD-linked reductases C-terminal domain
BHMT2	23743	genome.wustl.edu	37	5	78379147	78379147	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017614.4	+1	reviewed	p.A244V	0.998	92	0%	131	37.4%	0	-	benign(0)	tolerated(0.25)	neutral(0.037)	HMMPfam_S-methyl_trans,superfamily_S_methyl_trans
JMY	133746	genome.wustl.edu	37	5	78610533	78610533	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152405.4	+1	validated	p.D840Y	0.062	17	0%	29	72.4%	3	66.6%	benign(0.198)	tolerated(0.08)	neutral(0.319)	NULL
HOMER1	9456	genome.wustl.edu	37	5	78692720	78692720	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004272.3	-1	validated	p.E268*	1.000	208	0%	250	34.4%	7	28.5%	-	-	-	NULL
PAPD4	167153	genome.wustl.edu	37	5	78936750	78936750	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114393.1	+1	validated	p.R181Q	1.000	106	0%	114	28.1%	6	33.3%	probably_damaging(0.961)	tolerated(0.25)	neutral(0.441)	superfamily_Nucleotidyltransferase
CMYA5	202333	genome.wustl.edu	37	5	79027449	79027449	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153610.3	+1	validated	p.E954A	1.000	141	0%	198	36.9%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
CMYA5	202333	genome.wustl.edu	37	5	79029626	79029626	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153610.3	+1	validated	p.E1680*	0.987	121	0%	95	26.3%	0	-	-	-	-	NULL
CMYA5	202333	genome.wustl.edu	37	5	79030524	79030524	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153610.3	+1	validated	p.S1979N	0.000	155	0%	114	38.6%	0	-	benign(0.139)	deleterious(0)	neutral(0.457)	NULL
CMYA5	202333	genome.wustl.edu	37	5	79031408	79031408	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153610.3	+1	validated	p.D2274Y	0.931	47	0%	32	43.8%	0	-	benign(0.328)	tolerated(0.24)	neutral(0.140)	NULL
CMYA5	202333	genome.wustl.edu	37	5	79031763	79031763	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153610.3	+1	validated	p.S2392Y	0.001	42	0%	31	41.9%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
CMYA5	202333	genome.wustl.edu	37	5	79034826	79034826	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153610.3	+1	validated	p.R3413L	0.001	69	0%	65	30.8%	0	-	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
MTX3	345778	genome.wustl.edu	37	5	79284998	79284998	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010891.4	-1	validated	p.E100K	1.000	138	0%	144	66.7%	0	-	benign(0.164)	tolerated(0.31)	neutral(0.042)	HMMPfam_Tom37
SERINC5	256987	genome.wustl.edu	37	5	79473808	79473808	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178276.5	-1	validated	p.Y92H	1.000	179	0%	401	30.7%	30	53.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Serinc
SPZ1	84654	genome.wustl.edu	37	5	79616472	79616472	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032567.3	+1	validated	p.L146	0.006	73	0%	126	30.2%	0	-	-	-	-	NULL
ANKRD34B	340120	genome.wustl.edu	37	5	79854355	79854355	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004441.2	-1	validated	p.K495T	1.000	109	0%	168	38.1%	1	100%	benign(0.049)	deleterious(0.01)	neutral(0.409)	NULL
DHFR	1719	genome.wustl.edu	37	5	79924930	79924930	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000791.3	-1	reviewed	p.F180	1.000	96	0%	135	35.6%	30	53.3%	-	-	-	HMMPfam_DHFR_1,superfamily_Dihydrofolate reductases
MSH3	4437	genome.wustl.edu	37	5	80071530	80071530	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002439.3	+1	reviewed	p.K757N	1.000	245	0%	190	30%	3	33.3%	probably_damaging(0.989)	tolerated(0.11)	deleterious(0.711)	HMMSmart_SM00533,superfamily_DNA repair protein MutS domain III
MSH3	4437	genome.wustl.edu	37	5	80088572	80088572	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002439.3	+1	reviewed	p.R855I	0.988	159	0%	170	20.6%	4	0%	benign(0.018)	tolerated(0.21)	neutral(0.044)	HMMPfam_MutS_V,HMMSmart_SM00533,superfamily_P-loop containing nucleoside triphosphate hydrolases
RASGRF2	5924	genome.wustl.edu	37	5	80376533	80376533	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006909.1	+1	validated	p.L362	1.000	147	0%	144	33.3%	0	-	-	-	-	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
RASGRF2	5924	genome.wustl.edu	37	5	80497249	80497249	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006909.1	+1	validated	p.A965V	0.978	86	0%	106	32.1%	0	-	benign(0.012)	tolerated(0.07)	neutral(0.320)	HMMSmart_SM00229,superfamily_Ras GEF
XRCC4	7518	genome.wustl.edu	37	5	82400758	82400758	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022406.2	+1	reviewed	p.R7I	1.000	137	0%	101	28.7%	7	28.5%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_XRCC4 N-terminal domain,HMMPfam_XRCC4
XRCC4	7518	genome.wustl.edu	37	5	82406885	82406885	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022406.2	+1	reviewed	p.A60T	1.000	191	0%	200	25.5%	6	0%	possibly_damaging(0.659)	tolerated(0.09)	deleterious(0.529)	superfamily_XRCC4 N-terminal domain,HMMPfam_XRCC4
VCAN	1462	genome.wustl.edu	37	5	82816085	82816085	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004385.4	+1	reviewed	p.E654*	0.073	178	0.6%	172	33.1%	0	-	-	-	-	NULL
VCAN	1462	genome.wustl.edu	37	5	82817918	82817918	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004385.4	+1	reviewed	p.D1265Y	0.900	129	0%	157	25.5%	4	25%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
VCAN	1462	genome.wustl.edu	37	5	82834562	82834562	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004385.4	+1	reviewed	p.E1914*	0.000	77	0%	40	35%	4	0%	-	-	-	NULL
VCAN	1462	genome.wustl.edu	37	5	82834946	82834946	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004385.4	+1	reviewed	p.D2042N	0.027	139	0%	116	37.1%	4	25%	probably_damaging(0.998)	-	-	NULL
VCAN	1462	genome.wustl.edu	37	5	82836059	82836059	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004385.4	+1	reviewed	p.E2413*	0.000	124	0%	120	27.5%	15	0%	-	-	-	NULL
VCAN	1462	genome.wustl.edu	37	5	82837019	82837019	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004385.4	+1	reviewed	p.D2733N	1.000	62	0%	57	22.8%	18	0%	probably_damaging(0.998)	-	-	NULL
RASA1	5921	genome.wustl.edu	37	5	86633855	86633855	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002890.1	+1	reviewed	p.N322H	1.000	262	0%	324	31.8%	2	50%	probably_damaging(0.967)	tolerated(0.17)	neutral(0.468)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH2 domain
RASA1	5921	genome.wustl.edu	37	5	86672209	86672209	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002890.1	+1	reviewed	e16-1	1.000	155	0%	190	32.1%	2	0%	-	-	-	-
RASA1	5921	genome.wustl.edu	37	5	86674274	86674274	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002890.1	+1	reviewed	p.M802I	1.000	188	0%	200	29%	11	81.8%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_RasGAP,HMMSmart_SM00323,superfamily_GTPase activation domain GAP
CCNH	902	genome.wustl.edu	37	5	86707124	86707124	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001239.2	-1	reviewed	p.E53*	1.000	255	0.4%	295	35.9%	21	14.2%	-	-	-	superfamily_Cyclin_like
MEF2C	4208	genome.wustl.edu	37	5	88018554	88018554	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002397.3	-1	validated	p.S430L	1.000	158	0%	181	35.4%	2	0%	probably_damaging(0.984)	deleterious(0)	deleterious(0.875)	NULL
MEF2C	4208	genome.wustl.edu	37	5	88018705	88018705	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002397.3	-1	validated	p.L380I	1.000	163	0%	267	31.8%	1	0%	probably_damaging(0.988)	deleterious(0.02)	deleterious(0.821)	NULL
MBLAC2	153364	genome.wustl.edu	37	5	89757175	89757175	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203406.1	-1	validated	p.E217*	1.000	111	0%	121	33.1%	3	33.3%	-	-	-	HMMPfam_Lactamase_B,superfamily_Metallo-hydrolase/oxidoreductase
MBLAC2	153364	genome.wustl.edu	37	5	89757208	89757208	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203406.1	-1	validated	p.S206R	1.000	107	0%	144	24.3%	2	0%	benign(0.147)	tolerated(0.43)	neutral(0.026)	HMMPfam_Lactamase_B,superfamily_Metallo-hydrolase/oxidoreductase
POLR3G	10622	genome.wustl.edu	37	5	89791515	89791515	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006467.2	+1	validated	p.R90I	1.000	387	0%	418	28.7%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
LYSMD3	116068	genome.wustl.edu	37	5	89815070	89815070	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198273.1	-1	validated	p.E163*	1.000	330	0%	427	27.9%	3	100%	-	-	-	NULL
GPR98	84059	genome.wustl.edu	37	5	89923132	89923132	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032119.3	+1	reviewed	p.N259	1.000	73	0%	106	43.4%	0	-	-	-	-	NULL
GPR98	84059	genome.wustl.edu	37	5	89941882	89941882	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032119.3	+1	reviewed	p.R999I	0.978	298	0%	377	32.6%	0	-	possibly_damaging(0.929)	tolerated(0.05)	deleterious(0.722)	HMMPfam_Calx-beta,HMMSmart_SM00237
GPR98	84059	genome.wustl.edu	37	5	89992912	89992912	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000509621	+1	known	p.W267*	1.000	231	0%	221	31.7%	0	-	probably_damaging(1)	tolerated(0.17)	deleterious(0.559)	NULL
GPR98	84059	genome.wustl.edu	37	5	90136797	90136797	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032119.3	+1	reviewed	p.E5672*	0.292	85	0%	112	32.1%	7	28.5%	-	-	-	NULL
GPR98	84059	genome.wustl.edu	37	5	90144497	90144497	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032119.3	+1	reviewed	p.R5688Q	1.000	178	0%	146	32.9%	1	0%	probably_damaging(0.994)	deleterious(0.03)	deleterious(0.817)	NULL
NR2F1	7025	genome.wustl.edu	37	5	92921100	92921100	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005654.4	+1	provisional	p.A124V	1.000	65	0%	83	43.4%	30	46.6%	possibly_damaging(0.575)	tolerated(0.13)	neutral(0.450)	HMMPfam_zf-C4,HMMSmart_ZnF_C4,superfamily_SSF57716
NR2F1	7025	genome.wustl.edu	37	5	92929432	92929432	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005654.4	+1	provisional	p.E386K	1.000	104	0%	122	38.5%	66	30.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Hormone_recep,superfamily_Str_ncl_receptor
KIAA0825	285600	genome.wustl.edu	37	5	93859651	93859651	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145678.1	-1	validated	p.K95T	0.985	220	0%	170	33.5%	1	100%	possibly_damaging(0.527)	tolerated(0.05)	deleterious(0.523)	NULL
ANKRD32	84250	genome.wustl.edu	37	5	93964594	93964594	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032290.3	+1	validated	p.L27I	1.000	157	0%	167	25.1%	1	0%	benign(0.073)	tolerated(1)	neutral(0.005)	HMMPfam_BRCT,HMMSmart_BRCT,superfamily_BRCT
ANKRD32	84250	genome.wustl.edu	37	5	94014651	94014651	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032290.3	+1	validated	p.S656A	0.992	356	0%	512	31.8%	9	11.1%	possibly_damaging(0.865)	tolerated(0.12)	deleterious(0.596)	NULL
MCTP1	79772	genome.wustl.edu	37	5	94134757	94134757	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024717.4	-1	validated	p.F839L	1.000	206	0%	228	32.9%	2	0%	benign(0.021)	tolerated(0.63)	neutral(0.005)	NULL
MCTP1	79772	genome.wustl.edu	37	5	94245012	94245012	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024717.4	-1	validated	p.V532	0.978	137	0%	118	28%	0	-	-	-	-	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
TTC37	9652	genome.wustl.edu	37	5	94818227	94818227	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014639.2	-1	provisional	p.E1388*	1.000	259	0%	316	27.5%	15	20%	-	-	-	superfamily_Prenyl_trans
TTC37	9652	genome.wustl.edu	37	5	94863758	94863758	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014639.2	-1	provisional	p.D365Y	0.916	142	0%	107	38.3%	1	100%	probably_damaging(0.968)	tolerated(0.07)	deleterious(0.729)	NULL
TTC37	9652	genome.wustl.edu	37	5	94872585	94872585	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014639.2	-1	provisional	p.M229I	1.000	162	0%	221	29%	2	0%	possibly_damaging(0.643)	deleterious(0.04)	deleterious(0.575)	superfamily_SSF48452
ARSK	153642	genome.wustl.edu	37	5	94918696	94918696	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198150.2	+1	validated	p.R165C	0.204	130	0%	199	29.1%	2	0%	benign(0.054)	tolerated(0.19)	neutral(0.053)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
ELL2	22936	genome.wustl.edu	37	5	95242391	95242391	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012081.5	-1	validated	p.R193*	1.000	271	0%	368	35.9%	1	0%	-	-	-	HMMPfam_ELL
PCSK1	5122	genome.wustl.edu	37	5	95728734	95728734	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000439.4	-1	reviewed	p.L745M	0.994	154	0%	213	35.2%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
PCSK1	5122	genome.wustl.edu	37	5	95730723	95730723	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000439.4	-1	reviewed	p.R577	1.000	227	0%	306	30.7%	0	-	-	-	-	HMMPfam_P_proprotein,superfamily_Gal_bind_like
ERAP1	51752	genome.wustl.edu	37	5	96112228	96112228	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016442.3	-1	validated	p.E900*	1.000	238	0%	231	33.8%	12	25%	-	-	-	NULL
ERAP1	51752	genome.wustl.edu	37	5	96117545	96117545	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016442.3	-1	validated	p.V767M	1.000	162	0%	158	34.8%	11	27.2%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
ERAP1	51752	genome.wustl.edu	37	5	96139390	96139390	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016442.3	-1	validated	p.T80	0.000	302	0.3%	448	33%	6	0%	-	-	-	HMMPfam_Peptidase_M1,superfamily_SSF63737
LIX1	167410	genome.wustl.edu	37	5	96430658	96430658	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153234.4	-1	validated	p.R215W	0.989	152	0%	161	39.8%	0	-	possibly_damaging(0.438)	deleterious(0.01)	deleterious(0.548)	NULL
RGMB	285704	genome.wustl.edu	37	5	98115311	98115311	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012761.2	+1	validated	p.R96Q	1.000	101	0%	84	22.6%	5	20%	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	HMMPfam_RGM_N
CHD1	1105	genome.wustl.edu	37	5	98199149	98199149	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001270.2	-1	reviewed	p.E1464*	1.000	294	0%	288	30.9%	4	0%	-	-	-	NULL
CHD1	1105	genome.wustl.edu	37	5	98204301	98204301	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001270.2	-1	reviewed	p.K1382N	1.000	168	0%	307	29.6%	2	0%	benign(0.016)	tolerated(0.27)	neutral(0.034)	NULL
CHD1	1105	genome.wustl.edu	37	5	98262088	98262088	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001270.2	-1	reviewed	p.M1I	1.000	232	0.4%	265	34.7%	2	0%	benign(0.012)	deleterious(0)	neutral(0.445)	NULL
ST8SIA4	7903	genome.wustl.edu	37	5	100238590	100238590	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005668.4	-1	reviewed	p.E24*	1.000	261	0%	412	12.6%	2	0%	-	-	-	NULL
SLCO4C1	353189	genome.wustl.edu	37	5	101572570	101572570	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_180991.4	-1	validated	p.E723*	0.205	330	0%	308	33.1%	1	0%	-	-	-	NULL
SLCO4C1	353189	genome.wustl.edu	37	5	101631961	101631961	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_180991.4	-1	validated	p.K2	0.743	131	0%	178	36%	0	-	-	-	-	NULL
SLCO6A1	133482	genome.wustl.edu	37	5	101709078	101709078	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173488.3	-1	validated	p.K713T	0.000	257	0%	258	31.4%	0	-	benign(0.044)	deleterious(0)	neutral(0.447)	NULL
SLCO6A1	133482	genome.wustl.edu	37	5	101724491	101724491	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173488.3	-1	validated	p.E640*	0.001	188	0%	165	35.2%	0	-	-	-	-	HMMPfam_OATP,superfamily_MFS general substrate transporter
SLCO6A1	133482	genome.wustl.edu	37	5	101794133	101794133	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173488.3	-1	validated	p.D362Y	0.000	315	0%	210	26.7%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_OATP,superfamily_MFS general substrate transporter
SLCO6A1	133482	genome.wustl.edu	37	5	101834423	101834423	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173488.3	-1	validated	p.S42	0.001	91	0%	132	43.9%	0	-	-	-	-	NULL
PAM	5066	genome.wustl.edu	37	5	102260717	102260717	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000345721	+1	known	p.E119*	1.000	219	0%	202	40.1%	63	31.7%	-	-	-	NULL
PAM	5066	genome.wustl.edu	37	5	102361011	102361011	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000919.3	+1	reviewed	p.R888W	1.000	144	0%	79	21.5%	58	31%	benign(0.014)	deleterious(0.01)	neutral(0.406)	NULL
GIN1	54826	genome.wustl.edu	37	5	102423643	102423643	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017676.2	-1	validated	p.L510M	0.879	85	0%	97	40.2%	6	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
LOC100287833	100287833	genome.wustl.edu	37	5	106530946	106530946	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342546.1	+1	model	p.L19	0.993	42	0%	41	31.7%	144	0%	-	-	-	HMMPfam_AAA
FER	2241	genome.wustl.edu	37	5	108133970	108133970	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005246.2	+1	reviewed	p.K29N	1.000	109	0%	166	33.7%	1	100%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_FCH,HMMSmart_SM00055
FER	2241	genome.wustl.edu	37	5	108281868	108281868	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005246.2	+1	reviewed	p.R425H	1.000	203	0%	124	26.6%	2	50%	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	NULL
PJA2	9867	genome.wustl.edu	37	5	108679903	108679903	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014819.4	-1	validated	p.I663M	1.000	99	0%	170	24.7%	25	36%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMSmart_RING,HMMPfam_zf-C3HC4,superfamily_SSF57850
TMEM232	642987	genome.wustl.edu	37	5	109760540	109760540	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000455884	-1	known	p.K594R	0.941	195	0%	179	31.3%	0	-	benign(0.003)	tolerated(0.2)	neutral(0.049)	NULL
TMEM232	642987	genome.wustl.edu	37	5	109978037	109978037	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039763.3	-1	validated	p.R54K	0.191	332	0%	244	30.7%	0	-	benign(0.002)	tolerated(0.99)	-	NULL
CAMK4	814	genome.wustl.edu	37	5	110818492	110818492	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001744.3	+1	reviewed	p.L280V	0.999	98	0%	133	38.3%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
STARD4	134429	genome.wustl.edu	37	5	110837723	110837723	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139164.1	-1	provisional	p.G73	0.933	219	0%	214	35.5%	10	80%	-	-	-	HMMPfam_START,superfamily_SSF55961
EPB41L4A	64097	genome.wustl.edu	37	5	111575402	111575402	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022140.3	-1	validated	p.R307I	1.000	386	0%	305	28.9%	3	66.6%	possibly_damaging(0.853)	deleterious(0.02)	deleterious(0.712)	superfamily_PH domain-like
APC	324	genome.wustl.edu	37	5	112102086	112102086	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000038.4	+1	reviewed	p.D67Y	1.000	93	0%	96	29.2%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
APC	324	genome.wustl.edu	37	5	112173465	112173465	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000038.4	+1	reviewed	p.A725V	1.000	119	0%	176	34.7%	4	50%	possibly_damaging(0.729)	deleterious(0.02)	deleterious(0.649)	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
APC	324	genome.wustl.edu	37	5	112175046	112175046	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000038.4	+1	reviewed	p.S1252Y	0.998	61	0%	82	41.5%	2	50%	benign(0.011)	tolerated(0.07)	neutral(0.320)	NULL
APC	324	genome.wustl.edu	37	5	112175490	112175490	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000038.4	+1	reviewed	p.S1400L	1.000	136	0%	204	36.8%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
APC	324	genome.wustl.edu	37	5	112177901	112177901	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000038.4	+1	reviewed	p.R2204*	0.999	57	0%	64	42.2%	5	0%	-	-	-	NULL
APC	324	genome.wustl.edu	37	5	112178000	112178000	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000038.4	+1	reviewed	p.R2237*	1.000	88	0%	109	26.6%	7	42.8%	-	-	-	HMMPfam_APC_basic
APC	324	genome.wustl.edu	37	5	112179161	112179161	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000038.4	+1	reviewed	p.N2624D	0.727	85	0%	105	42.9%	5	60%	benign(0.004)	tolerated(0.33)	neutral(0.024)	NULL
APC	324	genome.wustl.edu	37	5	112179274	112179274	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000038.4	+1	reviewed	p.I2661	0.997	96	0%	124	34.7%	9	44.4%	-	-	-	NULL
DCP2	167227	genome.wustl.edu	37	5	112336802	112336802	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152624.4	+1	validated	p.D152Y	1.000	117	0%	119	16.8%	9	55.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_NUDIX,superfamily_Nudix
MCC	4163	genome.wustl.edu	37	5	112363114	112363114	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001085377.1	-1	reviewed	p.S982L	0.996	373	0%	528	34.7%	4	0%	benign(0.011)	deleterious(0.04)	neutral(0.349)	HMMPfam_MCC-bdg_PDZ
YTHDC2	64848	genome.wustl.edu	37	5	112851060	112851060	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022828.3	+1	validated	e2+1	1.000	264	0%	275	32%	0	-	-	-	-	-
YTHDC2	64848	genome.wustl.edu	37	5	112860692	112860692	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022828.3	+1	validated	p.R98K	1.000	86	0%	78	35.9%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_R3H,superfamily_SSF82708
ENSG00000245358	0	genome.wustl.edu	37	5	114513619	114513619	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000502182	+1	known	NULL	0.001	77	0%	140	40%	0	-	-	-	-	-
PGGT1B	5229	genome.wustl.edu	37	5	114572094	114572094	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005023.3	-1	validated	p.R202K	1.000	174	0%	169	32%	4	50%	benign(0)	tolerated(0.8)	neutral(0.001)	HMMPfam_Prenyltrans,superfamily_Terpenoid cyclases/Protein prenyltransferases
AQPEP	206338	genome.wustl.edu	37	5	115320352	115320352	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173800.4	+1	validated	p.V308	0.001	167	0%	150	24%	1	100%	-	-	-	HMMPfam_Peptidase_M1,superfamily_Leukotriene A4 hydrolase N-terminal domain
AQPEP	206338	genome.wustl.edu	37	5	115338968	115338968	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173800.4	+1	validated	p.S643F	1.000	133	0%	112	27.7%	0	-	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	NULL
AQPEP	206338	genome.wustl.edu	37	5	115351063	115351063	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173800.4	+1	validated	p.K855N	0.000	302	0%	199	27.6%	0	-	possibly_damaging(0.873)	tolerated(0.24)	neutral(0.377)	NULL
DMXL1	1657	genome.wustl.edu	37	5	118465081	118465081	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005509.4	+1	validated	p.V426	0.624	85	0%	86	31.4%	1	0%	-	-	-	superfamily_WD40 repeat-like
DMXL1	1657	genome.wustl.edu	37	5	118506506	118506506	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005509.4	+1	validated	p.S2007Y	0.997	68	0%	81	37%	1	0%	benign(0.257)	deleterious(0.05)	neutral(0.372)	NULL
FAM170A	340069	genome.wustl.edu	37	5	118970730	118970730	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000439366	+1	known	p.R171K	0.663	353	0%	445	31%	0	-	unknown(0)	-	-	NULL
LOX	4015	genome.wustl.edu	37	5	121412638	121412638	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002317.5	-1	reviewed	p.K230N	1.000	150	0.7%	132	31.8%	2	0%	benign(0.039)	tolerated(0.1)	neutral(0.288)	HMMPfam_Lysyl_oxidase
SNCAIP	9627	genome.wustl.edu	37	5	121786334	121786334	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005460.2	+1	reviewed	p.L598I	0.992	127	0%	140	40.7%	11	27.2%	probably_damaging(0.953)	deleterious(0.02)	deleterious(0.780)	NULL
CEP120	153241	genome.wustl.edu	37	5	122713081	122713081	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153223.3	-1	reviewed	p.R782H	0.720	295	0%	227	32.6%	3	66.6%	probably_damaging(0.997)	tolerated(0.13)	deleterious(0.719)	NULL
CEP120	153241	genome.wustl.edu	37	5	122734892	122734892	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153223.3	-1	reviewed	p.E184*	0.879	122	0%	160	39.4%	2	0%	-	-	-	NULL
CSNK1G3	1456	genome.wustl.edu	37	5	122881529	122881529	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001044723.1	+1	validated	p.R58*	1.000	119	0%	94	40.4%	2	0%	-	-	-	superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
CSNK1G3	1456	genome.wustl.edu	37	5	122909201	122909201	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001044723.1	+1	validated	p.S135Y	1.000	325	0%	459	25.9%	5	20%	probably_damaging(0.956)	deleterious(0)	deleterious(0.844)	superfamily_Kinase_like,HMMPfam_Pkinase
SLC12A2	6558	genome.wustl.edu	37	5	127497359	127497359	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001046.2	+1	validated	p.R828Q	1.000	44	0%	48	27.1%	7	28.5%	probably_damaging(0.973)	tolerated(0.37)	neutral(0.434)	NULL
SLC12A2	6558	genome.wustl.edu	37	5	127518625	127518625	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001046.2	+1	validated	p.K1097	1.000	158	0%	140	20%	8	37.5%	-	-	-	NULL
FBN2	2201	genome.wustl.edu	37	5	127595366	127595366	+	Silent	SNP	G	G	A	rs139098335	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001999.3	-1	reviewed	p.N2840	0.001	340	0.9%	475	39.4%	63	52.3%	-	-	-	NULL
CHSY3	337876	genome.wustl.edu	37	5	129520634	129520634	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175856.4	+1	validated	p.S600Y	1.000	90	0%	85	36.5%	1	0%	probably_damaging(0.997)	tolerated(0.1)	deleterious(0.752)	HMMPfam_CHGN,superfamily_SSF53448
HINT1	3094	genome.wustl.edu	37	5	130495033	130495033	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_024610.1	-1	validated	NULL	0.003	33	0%	63	38.1%	557	36.8%	-	-	-	-
HINT1	3094	genome.wustl.edu	37	5	130498310	130498310	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005340.5	-1	validated	p.K57N	1.000	244	0%	525	28.8%	777	40.1%	possibly_damaging(0.736)	tolerated(0.12)	deleterious(0.530)	HMMPfam_HIT,superfamily_His_triad-like_motif
LYRM7	90624	genome.wustl.edu	37	5	130506723	130506723	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181705.2	+1	validated	p.A4T	0.996	60	0%	90	31.1%	1	0%	benign(0.014)	tolerated(0.19)	neutral(0.050)	NULL
RAPGEF6	51735	genome.wustl.edu	37	5	130766704	130766704	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016340.5	-1	validated	p.S1438Y	1.000	166	0%	348	32.5%	1	0%	probably_damaging(1)	tolerated(0.11)	deleterious(0.772)	NULL
RAPGEF6	51735	genome.wustl.edu	37	5	130785736	130785736	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000296859	-1	known	p.K1068N	1.000	164	0%	215	36.3%	0	-	possibly_damaging(0.932)	tolerated(0.08)	deleterious(0.678)	HMMSmart_RasGEF,superfamily_Ras_GEF
RAPGEF6	51735	genome.wustl.edu	37	5	130940362	130940362	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016340.5	-1	validated	p.L32I	1.000	54	0%	106	20.8%	2	0%	probably_damaging(0.985)	deleterious(0.01)	deleterious(0.838)	superfamily_cAMP-binding domain-like
FNIP1	96459	genome.wustl.edu	37	5	131054688	131054688	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133372.2	-1	validated	p.S174N	1.000	122	0%	160	35.6%	7	28.5%	benign(0.355)	deleterious(0.04)	neutral(0.461)	NULL
IL3	3562	genome.wustl.edu	37	5	131396478	131396478	+	Missense_Mutation	SNP	C	C	A	rs40401	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000588.3	+1	reviewed	p.P27T	0.000	134	0%	200	30%	0	-	benign(0)	deleterious(0.05)	neutral(0.345)	HMMPfam_IL3
SLC22A5	6584	genome.wustl.edu	37	5	131724668	131724668	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003060.3	+1	reviewed	p.R336Q	0.244	81	0%	171	29.8%	4	50%	benign(0.077)	deleterious(0.03)	neutral(0.370)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
KIF3A	11127	genome.wustl.edu	37	5	132051455	132051455	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007054.5	-1	validated	p.E375*	1.000	167	0%	207	28.5%	1	0%	-	-	-	NULL
KIF3A	11127	genome.wustl.edu	37	5	132069979	132069979	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007054.5	-1	validated	p.V66	1.000	192	0%	343	32.7%	4	0%	-	-	-	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
GDF9	2661	genome.wustl.edu	37	5	132197960	132197960	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005260.3	-1	reviewed	p.R229I	0.413	181	0%	270	33.3%	0	-	possibly_damaging(0.928)	deleterious(0.03)	deleterious(0.740)	NULL
HSPA4	3308	genome.wustl.edu	37	5	132409810	132409810	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002154.3	+1	validated	p.K219*	1.000	86	0%	144	28.5%	16	0%	-	-	-	HMMPfam_HSP70,superfamily_SSF53067
FSTL4	23105	genome.wustl.edu	37	5	132535150	132535150	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015082.1	-1	validated	p.I722	0.995	125	0%	152	27.6%	1	0%	-	-	-	superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase
C5orf15	56951	genome.wustl.edu	37	5	133292566	133292566	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020199.2	-1	validated	p.N261T	1.000	118	0%	149	34.9%	18	50%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
C5orf15	56951	genome.wustl.edu	37	5	133295578	133295578	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000451255	-1	known	p.R19Q	0.000	95	0%	243	37%	39	43.5%	benign(0)	tolerated(0.1)	neutral(0.286)	NULL
TCF7	6932	genome.wustl.edu	37	5	133473798	133473798	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003202.3	+1	validated	p.E164K	1.000	304	0%	564	34.2%	3	33.3%	benign(0.277)	deleterious(0.02)	neutral(0.412)	HMMPfam_CTNNB1_binding
PPP2CA	5515	genome.wustl.edu	37	5	133536744	133536744	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002715.2	-1	reviewed	p.L170I	1.000	131	0%	179	21.2%	129	38.7%	benign(0.288)	deleterious(0.02)	deleterious(0.472)	HMMPfam_Metallophos,HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases
CDKL3	51265	genome.wustl.edu	37	5	133634364	133634364	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113575.1	-1	reviewed	p.R586I	1.000	133	0%	198	24.7%	1	100%	benign(0.015)	deleterious(0)	neutral(0.445)	NULL
CAMLG	819	genome.wustl.edu	37	5	134086512	134086512	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001745.2	+1	reviewed	p.E255K	1.000	222	0.5%	374	41.2%	66	42.4%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	NULL
DDX46	9879	genome.wustl.edu	37	5	134154670	134154670	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014829.2	+1	reviewed	p.R984W	1.000	116	0%	217	33.6%	53	28.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TXNDC15	79770	genome.wustl.edu	37	5	134223403	134223403	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024715.3	+1	validated	p.R41H	0.000	46	0%	78	30.8%	24	41.6%	benign(0)	tolerated(1)	-	NULL
PITX1	5307	genome.wustl.edu	37	5	134364650	134364650	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002653.4	-1	reviewed	p.S255L	1.000	58	0%	74	31.1%	77	58.4%	possibly_damaging(0.856)	deleterious(0.01)	deleterious(0.736)	NULL
H2AFY	9555	genome.wustl.edu	37	5	134670771	134670771	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138610.2	-1	reviewed	p.F338	0.973	140	0%	216	38.4%	337	41.2%	-	-	-	superfamily_Macro domain-like
C5orf20	140947	genome.wustl.edu	37	5	134782260	134782260	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130848.2	-1	reviewed	p.S180*	0.000	173	0%	253	35.6%	0	-	-	-	-	NULL
IL9	3578	genome.wustl.edu	37	5	135228123	135228123	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000590.1	-1	reviewed	p.I131T	0.000	274	0%	255	38%	0	-	benign(0.041)	tolerated(1)	neutral(0.003)	HMMPfam_IL7
FBXL21	26223	genome.wustl.edu	37	5	135272315	135272315	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012159.4	+1	validated	p.K11T	0.201	170	0%	156	39.1%	0	-	benign(0.022)	tolerated(0.08)	neutral(0.301)	NULL
FBXL21	26223	genome.wustl.edu	37	5	135276313	135276313	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012159.4	+1	validated	p.P209T	1.000	251	0%	197	26.9%	0	-	benign(0)	deleterious(0.05)	neutral(0.345)	superfamily_RNI-like
FBXL21	26223	genome.wustl.edu	37	5	135276812	135276812	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012159.4	+1	validated	p.E253K	0.995	160	0%	150	34%	0	-	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	superfamily_RNI-like
LECT2	3950	genome.wustl.edu	37	5	135286967	135286967	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002302.2	-1	reviewed	p.E78D	1.000	274	0%	294	27.6%	0	-	possibly_damaging(0.664)	tolerated(0.6)	neutral(0.239)	HMMPfam_Peptidase_M23
TGFBI	7045	genome.wustl.edu	37	5	135389736	135389736	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000358.2	+1	reviewed	p.T411A	1.000	120	0%	139	30.9%	141	9.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Fasciclin,HMMSmart_SM00554,superfamily_FAS1 domain
SMAD5	4090	genome.wustl.edu	37	5	135508374	135508374	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000507637	+1	known	p.R165Q	0.159	123	1.6%	117	27.4%	2	100%	possibly_damaging(0.662)	deleterious(0)	deleterious(0.678)	HMMPfam_MH2,HMMSmart_SM00524
TRPC7	57113	genome.wustl.edu	37	5	135561823	135561823	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000513104	-1	known	p.L721I	1.000	250	0%	266	27.1%	0	-	benign(0.009)	tolerated(0.26)	neutral(0.035)	NULL
TRPC7	57113	genome.wustl.edu	37	5	135610523	135610523	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000378459	-1	known	p.R261C	1.000	95	0%	119	30.3%	0	-	-	-	-	NULL
KLHL3	26249	genome.wustl.edu	37	5	136964046	136964046	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017415.2	-1	validated	p.D511N	1.000	200	0%	239	31.4%	1	0%	benign(0.015)	tolerated(0.84)	neutral(0.001)	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
KLHL3	26249	genome.wustl.edu	37	5	136993957	136993957	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017415.2	-1	validated	p.E256*	1.000	260	0%	315	26.7%	0	-	-	-	-	NULL
PKD2L2	27039	genome.wustl.edu	37	5	137226190	137226190	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014386.2	+1	validated	p.H18N	0.100	179	0%	243	23%	0	-	benign(0.006)	tolerated(0.13)	neutral(0.253)	NULL
PKD2L2	27039	genome.wustl.edu	37	5	137228173	137228173	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014386.2	+1	validated	p.T46	1.000	125	0.8%	180	37.8%	0	-	-	-	-	NULL
PKD2L2	27039	genome.wustl.edu	37	5	137241966	137241966	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014386.2	+1	validated	p.R273K	1.000	186	0%	269	33.5%	0	-	probably_damaging(0.994)	tolerated(0.24)	deleterious(0.489)	HMMPfam_PKD_channel
PKD2L2	27039	genome.wustl.edu	37	5	137259121	137259121	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014386.2	+1	validated	p.A488T	1.000	52	0%	50	22%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PKD_channel
BRD8	10902	genome.wustl.edu	37	5	137499034	137499034	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139199.1	-1	reviewed	e15-1	1.000	117	0%	181	26%	1	0%	-	-	-	-
KDM3B	51780	genome.wustl.edu	37	5	137734038	137734038	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016604.3	+1	validated	p.L1001	0.973	128	0%	204	36.8%	18	11.1%	-	-	-	NULL
KDM3B	51780	genome.wustl.edu	37	5	137761238	137761238	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016604.3	+1	validated	p.R1460W	1.000	228	0%	357	27.5%	22	50%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	superfamily_Clavaminate synthase-like
HSPA9	3313	genome.wustl.edu	37	5	137903145	137903145	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004134.6	-1	reviewed	p.V239F	0.954	130	0%	188	25.5%	114	46.4%	probably_damaging(0.963)	deleterious(0)	deleterious(0.850)	HMMPfam_HSP70,superfamily_SSF53067
HSPA9	3313	genome.wustl.edu	37	5	137906670	137906670	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004134.6	-1	reviewed	p.D130G	1.000	93	0%	178	27.5%	97	45.3%	possibly_damaging(0.568)	deleterious(0)	deleterious(0.639)	HMMPfam_HSP70,superfamily_SSF53067
LRRTM2	26045	genome.wustl.edu	37	5	138208952	138208952	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015564.2	-1	validated	p.S433Y	1.000	230	0%	322	31.4%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
LRRTM2	26045	genome.wustl.edu	37	5	138209226	138209226	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015564.2	-1	validated	p.P342S	1.000	170	0%	261	32.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LRRTM2	26045	genome.wustl.edu	37	5	138210084	138210084	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015564.2	-1	validated	p.P56S	1.000	110	0%	147	44.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_L domain-like
MATR3	9782	genome.wustl.edu	37	5	138643784	138643784	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000515833	+1	known	p.E1*	1.000	157	0%	266	34.2%	44	34%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PSD2	84249	genome.wustl.edu	37	5	139192948	139192948	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032289.2	+1	provisional	p.E142D	1.000	27	0%	31	32.3%	0	-	possibly_damaging(0.882)	deleterious(0)	deleterious(0.789)	NULL
SLC4A9	83697	genome.wustl.edu	37	5	139740931	139740931	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031467.2	+1	validated	p.T162A	0.957	31	0%	60	51.7%	0	-	benign(0.002)	tolerated(0.36)	neutral(0.020)	HMMPfam_Band_3_cyto,superfamily_PTrfase/Anion_transptr
ANKHD1-EIF4EBP3	404734	genome.wustl.edu	37	5	139838772	139838772	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020690.4	+1	reviewed	p.E502K	1.000	139	0%	158	24.7%	24	45.8%	probably_damaging(0.994)	tolerated(0.17)	deleterious(0.511)	HMMPfam_Ank,superfamily_ANK
ANKHD1-EIF4EBP3	404734	genome.wustl.edu	37	5	139903781	139903781	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020690.4	+1	reviewed	p.S1483L	0.998	193	0%	457	30%	19	31.5%	benign(0.002)	tolerated(0.26)	neutral(0.034)	NULL
WDR55	54853	genome.wustl.edu	37	5	140049165	140049165	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017706.4	+1	validated	p.A360T	1.000	79	0%	188	31.9%	38	34.2%	possibly_damaging(0.903)	deleterious(0.01)	deleterious(0.764)	NULL
HARS	3035	genome.wustl.edu	37	5	140057275	140057275	+	Missense_Mutation	SNP	G	G	A	rs186526524	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002109.3	-1	reviewed	p.R232C	1.000	215	0.5%	541	34.2%	89	42.6%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_tRNA-synt_2b,superfamily_SSF55681
ZMAT2	153527	genome.wustl.edu	37	5	140083572	140083572	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144723.1	+1	provisional	p.K102N	1.000	264	0%	518	30.9%	116	37%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00451,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers
PCDHA1	56147	genome.wustl.edu	37	5	140166686	140166686	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018900.2	+1	reviewed	p.E271K	1.000	162	0%	250	33.6%	1	100%	benign(0.041)	deleterious(0)	neutral(0.447)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA1	56147	genome.wustl.edu	37	5	140166776	140166776	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018900.2	+1	reviewed	p.E301*	1.000	117	0%	190	42.1%	1	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA2	56146	genome.wustl.edu	37	5	140176448	140176448	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018905.2	+1	reviewed	p.T633	0.019	64	0%	72	38.9%	1	100%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA3	56145	genome.wustl.edu	37	5	140181022	140181022	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018906.2	+1	reviewed	p.Q80	1.000	114	0%	159	30.2%	0	-	-	-	-	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like
PCDHA3	56145	genome.wustl.edu	37	5	140181797	140181797	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018906.2	+1	reviewed	p.E339K	0.029	189	0%	309	28.8%	1	0%	benign(0.003)	tolerated(0.44)	neutral(0.013)	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
PCDHA5	56143	genome.wustl.edu	37	5	140203204	140203204	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018908.2	+1	reviewed	p.G615D	0.015	76	0%	62	33.9%	1	100%	benign(0.019)	tolerated(0.23)	neutral(0.043)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA6	56142	genome.wustl.edu	37	5	140207700	140207700	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018909.2	+1	reviewed	p.R8S	0.001	132	0%	160	30.6%	1	100%	benign(0)	tolerated(0.67)	neutral(0.003)	NULL
PCDHA6	56142	genome.wustl.edu	37	5	140209867	140209867	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018909.2	+1	reviewed	p.A731T	0.060	56	0%	66	28.8%	2	50%	benign(0)	tolerated(0.4)	neutral(0.016)	NULL
PCDHA8	56140	genome.wustl.edu	37	5	140222421	140222421	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018911.2	+1	reviewed	p.S505	0.996	53	0%	44	31.8%	1	100%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA9	9752	genome.wustl.edu	37	5	140228891	140228891	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031857.1	+1	reviewed	p.E271K	1.000	150	0%	204	22.5%	1	0%	benign(0.086)	deleterious(0)	neutral(0.451)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA11	56138	genome.wustl.edu	37	5	140248752	140248752	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018902.3	+1	reviewed	p.E22K	0.000	151	0%	171	30.4%	3	66.6%	benign(0)	tolerated(0.3)	neutral(0.029)	superfamily_Cadherin-like
PCDHA12	56137	genome.wustl.edu	37	5	140255868	140255868	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018903.2	+1	reviewed	p.E271K	1.000	88	0%	162	32.1%	0	-	benign(0.085)	deleterious(0)	neutral(0.451)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA12	56137	genome.wustl.edu	37	5	140256572	140256572	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018903.2	+1	reviewed	p.S505	1.000	56	1.8%	45	33.3%	2	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA12	56137	genome.wustl.edu	37	5	140257013	140257013	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018903.2	+1	reviewed	p.K652N	0.802	83	0%	90	31.1%	5	80%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHA12	56137	genome.wustl.edu	37	5	140257130	140257130	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018903.2	+1	reviewed	p.A691	0.000	46	0%	37	43.2%	2	0%	-	-	-	NULL
PCDHAC1	56135	genome.wustl.edu	37	5	140306727	140306727	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018898.3	+1	reviewed	p.E84K	1.000	72	0%	96	43.8%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like
PCDHAC2	56134	genome.wustl.edu	37	5	140348329	140348329	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018899.5	+1	reviewed	p.V660L	0.996	68	0%	100	31%	0	-	possibly_damaging(0.897)	deleterious(0.01)	deleterious(0.760)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHAC2	56134	genome.wustl.edu	37	5	140389360	140389360	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018899.5	+1	reviewed	p.I954	1.000	76	0%	96	33.3%	17	35.2%	-	-	-	NULL
PCDHB1	29930	genome.wustl.edu	37	5	140431556	140431556	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013340.2	+1	reviewed	p.L167	0.576	40	0%	43	16.3%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB2	56133	genome.wustl.edu	37	5	140474745	140474745	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018936.2	+1	reviewed	p.R124Q	0.000	96	0%	129	34.9%	29	41.3%	benign(0.021)	tolerated(0.67)	neutral(0.004)	HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin
PCDHB3	56132	genome.wustl.edu	37	5	140482357	140482357	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018937.2	+1	reviewed	p.F708	0.000	91	0%	96	26%	6	16.6%	-	-	-	NULL
PCDHB5	26167	genome.wustl.edu	37	5	140516147	140516147	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015669.2	+1	reviewed	p.N377	0.427	123	0%	255	32.2%	1	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB6	56130	genome.wustl.edu	37	5	140530309	140530309	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018939.2	+1	reviewed	p.H157	0.022	68	0%	85	32.9%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB6	56130	genome.wustl.edu	37	5	140530708	140530708	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018939.2	+1	reviewed	p.F290	0.429	113	0%	236	33.9%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB17	54661	genome.wustl.edu	37	5	140537160	140537160	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_001280.1	+1	provisional	NULL	0.999	113	0%	94	34%	0	-	-	-	-	-
PCDHB7	56129	genome.wustl.edu	37	5	140554630	140554630	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018940.2	+1	reviewed	p.S738	0.011	111	0.9%	126	32.5%	3	33.3%	-	-	-	NULL
PCDHB8	56128	genome.wustl.edu	37	5	140559200	140559200	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019120.2	+1	reviewed	p.E529K	0.949	145	0%	86	32.6%	17	35.2%	benign(0.003)	tolerated(0.19)	neutral(0.050)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB16	57717	genome.wustl.edu	37	5	140562555	140562555	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020957.1	+1	reviewed	p.K141Q	0.144	63	0%	74	39.2%	4	75%	benign(0.085)	tolerated(0.07)	neutral(0.325)	superfamily_Cadherin
PCDHB16	57717	genome.wustl.edu	37	5	140564464	140564464	+	Nonstop_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020957.1	+1	reviewed	p.*777S	0.007	152	0%	186	38.2%	29	48.2%	-	-	-	NULL
PCDHB10	56126	genome.wustl.edu	37	5	140572991	140572991	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018930.3	+1	reviewed	p.R289Q	0.000	132	0%	175	34.9%	7	57.1%	benign(0.011)	tolerated(0.61)	neutral(0.005)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB10	56126	genome.wustl.edu	37	5	140573562	140573562	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018930.3	+1	reviewed	p.D479E	0.978	120	0%	87	21.8%	22	31.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB10	56126	genome.wustl.edu	37	5	140573649	140573649	+	Silent	SNP	G	G	A	rs61745573	byFrequency	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018930.3	+1	reviewed	p.A508	0.743	157	0.6%	121	20.7%	11	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB10	56126	genome.wustl.edu	37	5	140573707	140573707	+	Missense_Mutation	SNP	G	G	A	rs17844576		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018930.3	+1	reviewed	p.E528K	0.958	120	0%	117	22.2%	8	25%	possibly_damaging(0.515)	tolerated(0.2)	neutral(0.222)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB11	56125	genome.wustl.edu	37	5	140579459	140579459	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018931.2	+1	reviewed	p.E38*	1.000	193	0%	302	35.8%	1	0%	-	-	-	HMMPfam_Cadherin_2,superfamily_Cadherin
PCDHB11	56125	genome.wustl.edu	37	5	140580245	140580245	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018931.2	+1	reviewed	p.E300*	1.000	138	0%	183	26.8%	3	33.3%	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB12	56124	genome.wustl.edu	37	5	140588701	140588701	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018932.3	+1	reviewed	p.C74	0.214	160	0%	199	31.2%	1	0%	-	-	-	HMMSmart_CA,HMMPfam_Cadherin_2,superfamily_Cadherin
PCDHB12	56124	genome.wustl.edu	37	5	140589344	140589344	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018932.3	+1	reviewed	p.R289C	0.019	161	0%	242	28.1%	2	0%	benign(0.006)	deleterious(0.04)	neutral(0.349)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB12	56124	genome.wustl.edu	37	5	140590167	140590167	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018932.3	+1	reviewed	p.Y563C	1.000	41	0%	27	33.3%	4	0%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	superfamily_Cadherin
PCDHB13	56123	genome.wustl.edu	37	5	140593790	140593790	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018933.2	+1	reviewed	p.R32I	0.000	403	0%	581	23.9%	7	14.2%	benign(0.001)	tolerated(0.41)	neutral(0.015)	HMMPfam_Cadherin_2
PCDHB13	56123	genome.wustl.edu	37	5	140594526	140594526	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018933.2	+1	reviewed	p.E277D	0.000	148	0%	249	36.5%	4	75%	benign(0.002)	tolerated(0.12)	neutral(0.261)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
ENSG00000250800	0	genome.wustl.edu	37	5	140596118	140596118	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000507840	-1	novel	NULL	0.000	106	0%	153	35.9%	11	90.9%	-	-	-	-
PCDHB14	56122	genome.wustl.edu	37	5	140603604	140603604	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018934.2	+1	reviewed	p.S176Y	0.986	98	0%	217	30%	8	12.5%	benign(0.003)	deleterious(0.03)	neutral(0.364)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDHB14	56122	genome.wustl.edu	37	5	140605233	140605233	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018934.2	+1	reviewed	p.A719V	0.000	72	0%	52	19.2%	22	40.9%	benign(0.043)	tolerated(0.09)	neutral(0.299)	NULL
ENSG00000251462	0	genome.wustl.edu	37	5	140620557	140620557	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000503443	-1	known	NULL	0.033	7	0.000	8	0.500	0	-	-	-	-	-
ENSG00000251462	0	genome.wustl.edu	37	5	140621065	140621065	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000503443	-1	known	NULL	0.004	93	0%	70	40%	0	-	-	-	-	-
PCDHB15	56121	genome.wustl.edu	37	5	140626087	140626087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018935.2	+1	reviewed	p.S314L	0.000	129	0%	204	34.8%	1	0%	benign(0.258)	tolerated(0.39)	neutral(0.043)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
SLC25A2	83884	genome.wustl.edu	37	5	140683420	140683420	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031947.2	-1	reviewed	p.P5T	0.003	43	0%	56	28.6%	0	-	possibly_damaging(0.776)	deleterious(0.03)	deleterious(0.654)	superfamily_Mitoch_carrier
TAF7	6879	genome.wustl.edu	37	5	140698954	140698954	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005642.2	-1	reviewed	p.R220W	1.000	276	0%	380	35%	102	38.2%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
PCDHGA1	56114	genome.wustl.edu	37	5	140710257	140710257	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018912.2	+1	reviewed	p.K2N	0.023	118	0%	165	35.2%	0	-	benign(0.025)	tolerated(0.39)	neutral(0.017)	NULL
PCDHGA1	56114	genome.wustl.edu	37	5	140710861	140710861	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018912.2	+1	reviewed	p.E204*	0.741	34	0%	78	30.8%	2	50%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA1	56114	genome.wustl.edu	37	5	140712358	140712358	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018912.2	+1	reviewed	p.V703I	0.615	135	0%	112	36.6%	5	80%	benign(0.003)	tolerated(0.27)	neutral(0.034)	NULL
PCDHGA1	56114	genome.wustl.edu	37	5	140712490	140712490	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018912.2	+1	reviewed	p.R747W	0.065	151	0%	228	35.1%	1	100%	possibly_damaging(0.905)	deleterious(0.02)	deleterious(0.742)	NULL
PCDHGA2	56113	genome.wustl.edu	37	5	140720593	140720593	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018915.2	+1	reviewed	p.N685	0.000	163	0%	143	32.9%	2	0%	-	-	-	NULL
PCDHGA3	56112	genome.wustl.edu	37	5	140724612	140724612	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018916.3	+1	reviewed	p.L338M	0.647	120	0%	190	38.9%	0	-	benign(0.142)	tolerated(0.06)	neutral(0.335)	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
PCDHGA3	56112	genome.wustl.edu	37	5	140725254	140725254	+	Missense_Mutation	SNP	G	G	A	rs2879227		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018916.3	+1	reviewed	p.V552M	0.480	105	0%	138	29%	7	57.1%	benign(0.43)	deleterious(0.01)	deleterious(0.546)	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
PCDHGB1	56104	genome.wustl.edu	37	5	140730136	140730136	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018922.2	+1	reviewed	p.F103	0.658	103	0%	257	33.1%	2	0%	-	-	-	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like
PCDHGA4	56111	genome.wustl.edu	37	5	140735977	140735977	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018917.2	+1	reviewed	p.L404	0.002	72	0%	153	37.3%	2	100%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGB2	56103	genome.wustl.edu	37	5	140740714	140740714	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018923.2	+1	reviewed	p.L338I	0.039	108	0%	166	26.5%	3	0%	benign(0.089)	tolerated(0.24)	neutral(0.044)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGB2	56103	genome.wustl.edu	37	5	140740951	140740951	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018923.2	+1	reviewed	p.E417*	0.909	47	0%	53	18.9%	3	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGB2	56103	genome.wustl.edu	37	5	140741287	140741287	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018923.2	+1	reviewed	p.E529K	0.868	24	0%	27	33.3%	2	50%	benign(0.033)	tolerated(0.18)	neutral(0.058)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGB3	56102	genome.wustl.edu	37	5	140750021	140750021	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018924.2	+1	reviewed	p.F20L	0.000	73	0%	74	32.4%	0	-	-	-	-	HMMSmart_SM00112
PCDHGB3	56102	genome.wustl.edu	37	5	140750174	140750174	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018924.2	+1	reviewed	p.E71D	0.000	53	0%	84	29.8%	0	-	-	-	-	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like
PCDHGB3	56102	genome.wustl.edu	37	5	140751391	140751391	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018924.2	+1	reviewed	p.S477L	0.000	26	0%	47	38.3%	2	100%	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA6	56109	genome.wustl.edu	37	5	140754661	140754661	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018919.2	+1	reviewed	p.I337	0.012	110	1.8%	137	27.7%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
PCDHGA6	56109	genome.wustl.edu	37	5	140755333	140755333	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018919.2	+1	reviewed	p.E561D	0.636	97	0%	114	23.7%	4	50%	possibly_damaging(0.893)	deleterious(0.03)	deleterious(0.716)	superfamily_Cadherin-like
PCDHGA6	56109	genome.wustl.edu	37	5	140755889	140755889	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018919.2	+1	reviewed	p.R747W	0.986	173	0%	237	33.8%	3	66.6%	possibly_damaging(0.502)	deleterious(0.02)	deleterious(0.550)	NULL
PCDHGA7	56108	genome.wustl.edu	37	5	140762610	140762610	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018920.2	+1	reviewed	p.I48	0.998	42	0%	54	38.9%	3	33.3%	-	-	-	HMMSmart_SM00112,HMMPfam_Cadherin_2,superfamily_Cadherin-like
PCDHGB4	8641	genome.wustl.edu	37	5	140768385	140768385	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003736.2	+1	reviewed	p.E312*	0.000	89	0%	150	35.3%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGB4	8641	genome.wustl.edu	37	5	140769030	140769030	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003736.2	+1	reviewed	p.E527K	0.035	30	0%	30	33.3%	1	100%	benign(0.077)	tolerated(0.28)	neutral(0.037)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDHGA8	9708	genome.wustl.edu	37	5	140774440	140774440	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032088.1	+1	reviewed	p.S687L	0.013	54	0%	75	42.7%	2	100%	benign(0.111)	deleterious(0.02)	neutral(0.392)	NULL
PCDHGA9	56107	genome.wustl.edu	37	5	140782954	140782954	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018921.2	+1	reviewed	p.I145	0.002	55	0%	72	38.9%	0	-	-	-	-	superfamily_Cadherin-like
PCDHGB6	56100	genome.wustl.edu	37	5	140789894	140789894	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018926.2	+1	reviewed	p.L709M	0.100	307	0%	387	28.4%	13	46.1%	possibly_damaging(0.769)	tolerated(0.06)	deleterious(0.608)	NULL
PCDHGA10	56106	genome.wustl.edu	37	5	140792886	140792886	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018913.2	+1	reviewed	p.F48	0.101	75	0%	92	42.4%	1	100%	-	-	-	HMMPfam_Cadherin_2,superfamily_Cadherin-like
PCDHGA10	56106	genome.wustl.edu	37	5	140794422	140794422	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018913.2	+1	reviewed	p.N560	0.985	125	0%	184	31.5%	1	100%	-	-	-	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
PCDHGB7	56099	genome.wustl.edu	37	5	140797856	140797856	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018927.2	+1	reviewed	p.E144*	1.000	207	0%	418	38%	0	-	-	-	-	HMMPfam_Cadherin,superfamily_Cadherin-like
PCDHGB7	56099	genome.wustl.edu	37	5	140799833	140799833	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018927.2	+1	reviewed	p.L803I	0.000	52	0%	88	38.6%	2	0%	benign(0.002)	tolerated(0.47)	neutral(0.011)	NULL
PCDHGC4	56098	genome.wustl.edu	37	5	140866101	140866101	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018928.2	+1	reviewed	p.S454Y	0.201	64	0%	80	36.2%	0	-	benign(0.021)	tolerated(0.4)	neutral(0.017)	superfamily_Cadherin-like
DIAPH1	1729	genome.wustl.edu	37	5	140962817	140962817	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005219.4	-1	reviewed	p.L192F	0.999	158	0%	265	26.4%	16	31.2%	possibly_damaging(0.905)	tolerated(0.08)	deleterious(0.659)	HMMPfam_Drf_GBD
RELL2	285613	genome.wustl.edu	37	5	141019837	141019837	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130029.1	+1	validated	p.S285I	1.000	104	0%	187	32.6%	9	77.7%	benign(0.255)	deleterious(0.01)	neutral(0.432)	NULL
ARAP3	64411	genome.wustl.edu	37	5	141052192	141052192	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022481.5	-1	reviewed	p.E438K	1.000	60	0%	67	43.3%	2	0%	probably_damaging(0.991)	deleterious(0.05)	deleterious(0.789)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
ARAP3	64411	genome.wustl.edu	37	5	141052670	141052670	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022481.5	-1	reviewed	p.T335P	1.000	115	0%	172	30.8%	1	0%	benign(0.01)	tolerated(0.28)	neutral(0.032)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
KIAA0141	9812	genome.wustl.edu	37	5	141305053	141305053	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142603.1	+1	validated	p.S75	0.001	85	0%	149	46.3%	22	36.3%	-	-	-	NULL
PCDH12	51294	genome.wustl.edu	37	5	141336190	141336190	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016580.2	-1	reviewed	p.T409	0.530	152	0%	340	35%	1	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
RNF14	9604	genome.wustl.edu	37	5	141362946	141362946	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004290.3	+1	reviewed	p.E355D	0.998	60	0%	183	31.1%	18	50%	benign(0.023)	tolerated(0.52)	neutral(0.010)	superfamily_RING/U-box
ARHGAP26	23092	genome.wustl.edu	37	5	142283111	142283111	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015071.4	+1	reviewed	p.N237H	1.000	56	0%	98	38.8%	4	25%	probably_damaging(0.961)	deleterious(0.02)	deleterious(0.787)	NULL
ARHGAP26	23092	genome.wustl.edu	37	5	142437266	142437266	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015071.4	+1	reviewed	p.E498*	1.000	110	0%	97	30.9%	2	0%	-	-	-	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
ARHGAP26	23092	genome.wustl.edu	37	5	142587005	142587005	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015071.4	+1	reviewed	p.D744G	1.000	250	0%	388	35.1%	0	-	-	-	-	superfamily_SH3-domain
NR3C1	2908	genome.wustl.edu	37	5	142779770	142779770	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024094.1	-1	reviewed	p.P212H	1.000	109	0%	127	31.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GCR
KCTD16	57528	genome.wustl.edu	37	5	143586509	143586509	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020768.3	+1	validated	p.D78Y	1.000	142	0.7%	176	30.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_BTB,HMMPfam_K_tetra,superfamily_BTB/POZ_fold
PRELID2	153768	genome.wustl.edu	37	5	145197494	145197494	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182960.2	-1	validated	p.E123*	1.000	153	0.7%	150	39.3%	4	75%	-	-	-	HMMPfam_PRELI
GRXCR2	643226	genome.wustl.edu	37	5	145246147	145246147	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080516.1	-1	provisional	p.E161*	0.493	327	0%	332	31.6%	0	-	-	-	-	NULL
PLAC8L1	153770	genome.wustl.edu	37	5	145483858	145483858	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029869.1	-1	provisional	p.S6N	0.980	151	0%	178	32.6%	0	-	benign(0)	tolerated(1)	-	NULL
RBM27	54439	genome.wustl.edu	37	5	145603076	145603076	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018989.1	+1	validated	p.E97*	1.000	68	0%	111	28.8%	0	-	-	-	-	superfamily_SSF101233
RBM27	54439	genome.wustl.edu	37	5	145634590	145634590	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018989.1	+1	validated	p.R510I	1.000	94	0%	141	36.2%	1	100%	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
RBM27	54439	genome.wustl.edu	37	5	145638139	145638139	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018989.1	+1	validated	p.K574N	1.000	127	0%	263	32.7%	3	33.3%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	NULL
GPR151	134391	genome.wustl.edu	37	5	145895077	145895077	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194251.2	-1	provisional	p.S200	0.000	129	0%	165	34.5%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
PPP2R2B	5521	genome.wustl.edu	37	5	146077608	146077608	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181676.2	-1	reviewed	p.E93*	1.000	236	0%	184	29.3%	0	-	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_PR55_1,HMMPfam_PP2A_B_N
JAKMIP2	9832	genome.wustl.edu	37	5	147040649	147040649	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014790.3	-1	provisional	p.K163N	1.000	181	0%	217	29.5%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
JAKMIP2	9832	genome.wustl.edu	37	5	147040924	147040924	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014790.3	-1	provisional	p.E72*	1.000	84	0%	99	28.3%	0	-	-	-	-	NULL
SPINK5	11005	genome.wustl.edu	37	5	147473985	147473985	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127698.1	+1	reviewed	p.P245	0.378	198	0%	176	36.9%	1	100%	-	-	-	HMMSmart_SM00280,HMMPfam_Kazal_2,superfamily_Kazal-type serine protease inhibitors
FBXO38	81545	genome.wustl.edu	37	5	147820041	147820041	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_205836.1	+1	validated	p.L1075F	1.000	53	0%	57	36.8%	25	56%	probably_damaging(0.959)	deleterious(0.04)	deleterious(0.752)	NULL
HTR4	3360	genome.wustl.edu	37	5	147900490	147900490	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040172.2	-1	reviewed	p.H182N	0.000	110	0%	83	26.5%	0	-	benign(0.301)	tolerated(0.32)	neutral(0.117)	HMMPfam_7tm_1,superfamily_SSF81321
HTR4	3360	genome.wustl.edu	37	5	147928402	147928402	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040173.2	-1	reviewed	p.S61Y	1.000	187	0%	268	34.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
SH3TC2	79628	genome.wustl.edu	37	5	148407738	148407738	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024577.3	-1	reviewed	p.K519N	0.993	48	0%	56	33.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SH3TC2	79628	genome.wustl.edu	37	5	148407828	148407828	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024577.3	-1	reviewed	p.F489L	0.894	40	0%	55	30.9%	0	-	benign(0)	tolerated(1)	-	NULL
SH3TC2	79628	genome.wustl.edu	37	5	148417924	148417924	+	Missense_Mutation	SNP	G	G	A	rs151205080	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024577.3	-1	reviewed	p.S312L	0.883	176	0%	148	30.4%	0	-	benign(0.018)	deleterious(0.04)	neutral(0.349)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
ABLIM3	22885	genome.wustl.edu	37	5	148610266	148610266	+	Nonsense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014945.2	+1	validated	p.L271*	1.000	197	0%	249	41.8%	1	0%	-	-	-	NULL
ABLIM3	22885	genome.wustl.edu	37	5	148622066	148622066	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014945.2	+1	validated	p.N439S	1.000	130	0%	220	30.5%	1	0%	benign(0.002)	tolerated(0.1)	neutral(0.286)	NULL
AFAP1L1	134265	genome.wustl.edu	37	5	148699221	148699221	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152406.2	+1	validated	p.A519V	1.000	120	0%	101	36.6%	3	0%	probably_damaging(0.998)	tolerated(0.12)	deleterious(0.735)	NULL
CSNK1A1	1452	genome.wustl.edu	37	5	148891431	148891431	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025105.1	-1	validated	p.R229*	1.000	85	0%	114	28.9%	64	6.2%	-	-	-	superfamily_Kinase_like,HMMPfam_Pkinase
ARHGEF37	389337	genome.wustl.edu	37	5	148996278	148996278	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001669.2	+1	validated	p.L203F	1.000	109	0.9%	210	41.4%	1	0%	possibly_damaging(0.922)	deleterious(0.03)	deleterious(0.736)	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain
PPARGC1B	133522	genome.wustl.edu	37	5	149216482	149216482	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133263.3	+1	reviewed	p.E822*	0.627	44	0%	41	19.5%	0	-	-	-	-	NULL
SLC26A2	1836	genome.wustl.edu	37	5	149360495	149360495	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000112.3	+1	reviewed	p.E447*	1.000	178	0%	217	31.3%	2	0%	-	-	-	HMMPfam_Sulfate_transp
TIGD6	81789	genome.wustl.edu	37	5	149375166	149375166	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030953.2	-1	validated	p.R249Q	0.000	68	0%	104	38.5%	8	25%	possibly_damaging(0.901)	tolerated(0.49)	neutral(0.367)	HMMPfam_DDE
TIGD6	81789	genome.wustl.edu	37	5	149375188	149375188	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030953.2	-1	validated	p.H242N	0.955	70	0%	105	36.2%	9	44.4%	benign(0.016)	tolerated(0.78)	neutral(0.002)	HMMPfam_DDE
SLC6A7	6534	genome.wustl.edu	37	5	149584133	149584133	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014228.3	+1	validated	p.S457	0.929	114	0%	145	37.2%	0	-	-	-	-	HMMPfam_SNF
SLC6A7	6534	genome.wustl.edu	37	5	149589093	149589093	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014228.3	+1	validated	p.R609H	1.000	41	0%	87	27.6%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
ARSI	340075	genome.wustl.edu	37	5	149677374	149677374	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012301.2	-1	validated	p.Y371	0.599	17	0%	12	41.7%	1	0%	-	-	-	HMMPfam_Sulfatase,superfamily_Alkaline phosphatase-like
NDST1	3340	genome.wustl.edu	37	5	149918790	149918790	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001543.4	+1	validated	p.V480I	1.000	221	0%	425	28%	9	33.3%	benign(0.012)	deleterious(0.02)	neutral(0.384)	NULL
NDST1	3340	genome.wustl.edu	37	5	149927803	149927803	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001543.4	+1	validated	p.P723	0.161	56	0%	71	28.2%	17	29.4%	-	-	-	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
SYNPO	11346	genome.wustl.edu	37	5	150028219	150028219	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007286.5	+1	validated	p.T128A	0.000	117	0%	211	40.8%	6	0%	benign(0.014)	deleterious(0.02)	neutral(0.384)	NULL
SYNPO	11346	genome.wustl.edu	37	5	150029313	150029313	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007286.5	+1	validated	p.E492D	1.000	48	0%	44	38.6%	9	0%	probably_damaging(0.973)	tolerated(0.34)	neutral(0.438)	NULL
C5orf62	85027	genome.wustl.edu	37	5	150158180	150158180	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032947.4	+1	validated	p.E17K	0.000	30	0%	30	30%	1	100%	-	-	-	NULL
IRGM	345611	genome.wustl.edu	37	5	150227846	150227846	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145805.1	+1	validated	p.R54Q	0.000	123	0%	170	34.7%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_IIGP,superfamily_P-loop containing nucleoside triphosphate hydrolases
ZNF300	91975	genome.wustl.edu	37	5	150276442	150276442	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052860.2	-1	reviewed	p.S120*	1.000	115	0%	75	28%	0	-	-	-	-	NULL
TNIP1	10318	genome.wustl.edu	37	5	150444543	150444543	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006058.3	-1	validated	p.K38N	1.000	191	0%	289	21.5%	24	37.5%	possibly_damaging(0.619)	tolerated(0.15)	neutral(0.457)	NULL
ANXA6	309	genome.wustl.edu	37	5	150497329	150497329	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001155.3	-1	reviewed	p.S503Y	1.000	117	0%	150	38.7%	75	5.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_Annexin,PatternScan_ANNEXIN,HMMPfam_Annexin,HMMSmart_ANX
ANXA6	309	genome.wustl.edu	37	5	150507777	150507777	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001155.3	-1	reviewed	p.K314N	1.000	117	0%	233	30.5%	60	11.6%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_Annexin,PatternScan_ANNEXIN,HMMPfam_Annexin,HMMSmart_ANX
SLC36A3	285641	genome.wustl.edu	37	5	150663720	150663720	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145017.1	-1	validated	p.L328M	1.000	80	0%	160	21.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Aa_trans
SLC36A3	285641	genome.wustl.edu	37	5	150663725	150663725	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145017.1	-1	validated	p.F326C	0.114	79	0%	161	32.9%	0	-	possibly_damaging(0.492)	tolerated(0.18)	neutral(0.220)	HMMPfam_Aa_trans
FAT2	2196	genome.wustl.edu	37	5	150911472	150911472	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001447.2	-1	reviewed	p.D3163N	1.000	32	0%	33	42.4%	0	-	possibly_damaging(0.796)	tolerated(0.54)	neutral(0.306)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT2	2196	genome.wustl.edu	37	5	150914064	150914064	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001447.2	-1	reviewed	p.P3111	0.001	56	0%	55	29.1%	0	-	-	-	-	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT2	2196	genome.wustl.edu	37	5	150924259	150924259	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001447.2	-1	reviewed	p.V2143	0.919	74	0%	92	37%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT2	2196	genome.wustl.edu	37	5	150925098	150925098	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001447.2	-1	reviewed	p.D1864Y	0.996	109	0%	120	30.8%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMSmart_SM00112,superfamily_Cadherin-like
FAT2	2196	genome.wustl.edu	37	5	150934120	150934120	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001447.2	-1	reviewed	p.R1250C	1.000	101	0%	138	38.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Cadherin,superfamily_Cadherin-like
FAT2	2196	genome.wustl.edu	37	5	150946096	150946096	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001447.2	-1	reviewed	p.Q799H	1.000	197	0.5%	170	32.9%	0	-	possibly_damaging(0.837)	tolerated(0.1)	deleterious(0.606)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
FAT2	2196	genome.wustl.edu	37	5	150946818	150946818	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001447.2	-1	reviewed	p.D559Y	1.000	69	0%	88	37.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00112,superfamily_Cadherin-like
FAT2	2196	genome.wustl.edu	37	5	150947287	150947287	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001447.2	-1	reviewed	p.E402D	0.998	166	0%	219	34.2%	0	-	benign(0)	tolerated(0.85)	neutral(0.001)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
SPARC	6678	genome.wustl.edu	37	5	151052711	151052711	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003118.2	-1	provisional	p.E63*	0.995	218	0%	358	30.4%	573	0%	-	-	-	NULL
ATOX1	475	genome.wustl.edu	37	5	151125895	151125895	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004045.3	-1	reviewed	p.G66	0.037	111	0.9%	179	35.8%	281	33%	-	-	-	superfamily_HMA heavy metal-associated domain
GRIA1	2890	genome.wustl.edu	37	5	153056593	153056593	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000827.3	+1	reviewed	p.A301T	1.000	109	0%	136	26.5%	0	-	benign(0)	tolerated(0.32)	neutral(0.024)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
FAM114A2	10827	genome.wustl.edu	37	5	153382524	153382524	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018691.2	-1	validated	p.R333S	1.000	311	0%	372	30.4%	4	50%	possibly_damaging(0.595)	tolerated(0.51)	neutral(0.215)	NULL
FAM114A2	10827	genome.wustl.edu	37	5	153406826	153406826	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018691.2	-1	validated	p.K233N	1.000	289	0%	197	34%	2	0%	benign(0.179)	tolerated(0.08)	neutral(0.317)	HMMPfam_DUF719
HAND1	9421	genome.wustl.edu	37	5	153857045	153857045	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004821.2	-1	reviewed	p.S175N	1.000	90	0%	158	29.1%	0	-	benign(0.002)	tolerated(0.32)	neutral(0.024)	NULL
HAND1	9421	genome.wustl.edu	37	5	153857232	153857232	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004821.2	-1	reviewed	p.A113T	1.000	124	0%	186	32.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic
LARP1	23367	genome.wustl.edu	37	5	154174769	154174769	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015315.3	+1	validated	p.D346Y	1.000	206	0%	376	30.6%	28	35.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_La,HMMSmart_LA,superfamily_SSF46785
LARP1	23367	genome.wustl.edu	37	5	154188092	154188092	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015315.3	+1	validated	p.R847	0.353	69	0%	147	32.7%	44	43.1%	-	-	-	HMMSmart_DM15
CNOT8	9337	genome.wustl.edu	37	5	154252115	154252115	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004779.4	+1	provisional	p.E211D	1.000	298	0%	619	21.8%	40	35%	benign(0.183)	tolerated(0.7)	neutral(0.019)	HMMPfam_CAF1,superfamily_Ribonuclease H-like
GEMIN5	25929	genome.wustl.edu	37	5	154287276	154287276	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015465.3	-1	validated	p.S757L	0.000	337	0%	603	35.2%	5	60%	benign(0)	tolerated(0.23)	neutral(0.042)	NULL
HAVCR2	84868	genome.wustl.edu	37	5	156533766	156533766	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032782.3	-1	validated	p.R89H	0.000	127	0%	213	31.5%	3	0%	benign(0.003)	tolerated(0.62)	neutral(0.004)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
MED7	9443	genome.wustl.edu	37	5	156566386	156566386	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100816.1	-1	reviewed	p.K19N	1.000	90	0%	176	30.7%	13	30.7%	benign(0.003)	tolerated(0.6)	neutral(0.004)	HMMPfam_MED7
FAM71B	153745	genome.wustl.edu	37	5	156590549	156590549	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130899.2	-1	validated	p.G243R	0.000	80	0%	103	35.9%	0	-	benign(0)	tolerated(0.51)	neutral(0.009)	NULL
ITK	3702	genome.wustl.edu	37	5	156608039	156608039	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005546.3	+1	reviewed	p.Q17H	0.986	111	0%	135	37.8%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
ITK	3702	genome.wustl.edu	37	5	156608060	156608060	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005546.3	+1	reviewed	p.S24	0.020	120	0%	144	30.6%	0	-	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
ITK	3702	genome.wustl.edu	37	5	156638376	156638376	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005546.3	+1	reviewed	p.E108*	1.000	69	0%	100	28%	2	0%	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
ITK	3702	genome.wustl.edu	37	5	156649963	156649963	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005546.3	+1	reviewed	p.E196K	0.997	152	0%	228	31.6%	0	-	possibly_damaging(0.648)	deleterious(0.02)	deleterious(0.611)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
CYFIP2	26999	genome.wustl.edu	37	5	156734839	156734839	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037332.2	+1	validated	p.R289I	1.000	140	0%	215	27.4%	0	-	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	HMMPfam_FragX_IP
CYFIP2	26999	genome.wustl.edu	37	5	156747679	156747679	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037332.2	+1	validated	p.R514*	1.000	77	0%	159	30.8%	2	0%	-	-	-	HMMPfam_FragX_IP
CYFIP2	26999	genome.wustl.edu	37	5	156757773	156757773	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037332.2	+1	validated	p.R727Q	1.000	230	0%	396	35.1%	4	0%	probably_damaging(0.988)	tolerated(0.07)	deleterious(0.756)	HMMPfam_FragX_IP
CYFIP2	26999	genome.wustl.edu	37	5	156766139	156766139	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037332.2	+1	validated	p.F820	0.981	133	0.8%	201	33.8%	3	33.3%	-	-	-	HMMPfam_FragX_IP
ADAM19	8728	genome.wustl.edu	37	5	156918885	156918885	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033274.2	-1	reviewed	p.F648L	0.994	126	0.8%	211	32.7%	5	0%	possibly_damaging(0.766)	tolerated(0.67)	neutral(0.286)	NULL
ADAM19	8728	genome.wustl.edu	37	5	156929875	156929875	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033274.2	-1	reviewed	p.G415V	1.000	337	0%	720	30%	4	0%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	NULL
SOX30	11063	genome.wustl.edu	37	5	157073794	157073794	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178424.1	-1	reviewed	p.R413Q	1.000	127	0%	218	28%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	superfamily_HMG-box
LSM11	134353	genome.wustl.edu	37	5	157182234	157182234	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173491.2	+1	provisional	p.R349*	1.000	61	1.6%	113	35.4%	4	0%	-	-	-	HMMPfam_LSM,superfamily_Sm_like_riboprot
EBF1	1879	genome.wustl.edu	37	5	158126149	158126149	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024007.3	-1	validated	p.A582	1.000	221	0%	223	30%	3	0%	-	-	-	NULL
RNF145	153830	genome.wustl.edu	37	5	158603671	158603671	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144726.1	-1	provisional	p.L225R	1.000	222	0%	217	32.7%	45	35.5%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
PWWP2A	114825	genome.wustl.edu	37	5	159505169	159505169	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052927.2	-1	validated	p.R559I	1.000	139	0%	224	32.6%	2	0%	unknown(0)	-	-	NULL
C1QTNF2	114898	genome.wustl.edu	37	5	159776265	159776265	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031908.4	-1	validated	p.Q301H	1.000	83	0%	113	35.4%	2	0%	probably_damaging(0.999)	tolerated(0.5)	deleterious(0.500)	HMMPfam_C1q,HMMSmart_SM00110,superfamily_TNF-like
C5orf54	63920	genome.wustl.edu	37	5	159821052	159821052	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022090.3	-1	validated	p.I482	0.987	89	0%	115	37.4%	6	50%	-	-	-	NULL
C5orf54	63920	genome.wustl.edu	37	5	159821208	159821208	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022090.3	-1	validated	p.L430	1.000	77	0%	76	39.5%	6	16.6%	-	-	-	NULL
ATP10B	23120	genome.wustl.edu	37	5	160025834	160025834	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025153.2	-1	validated	p.I1169	0.972	137	0%	196	27.6%	0	-	-	-	-	NULL
ATP10B	23120	genome.wustl.edu	37	5	160025858	160025858	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025153.2	-1	validated	p.V1161	1.000	139	0%	208	33.7%	0	-	-	-	-	NULL
ATP10B	23120	genome.wustl.edu	37	5	160061419	160061419	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025153.2	-1	validated	p.N441	1.000	111	0%	113	26.5%	0	-	-	-	-	superfamily_HAD-like
GABRB2	2561	genome.wustl.edu	37	5	160753385	160753385	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021911.2	-1	reviewed	p.S394Y	1.000	183	0%	208	27.9%	0	-	unknown(0)	deleterious(0.01)	-	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
GABRB2	2561	genome.wustl.edu	37	5	160886834	160886834	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021911.2	-1	reviewed	p.M85R	1.000	95	0%	87	34.5%	0	-	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD
GABRB2	2561	genome.wustl.edu	37	5	160972297	160972297	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021911.2	-1	reviewed	p.P58H	1.000	107	0%	100	36%	0	-	benign(0.096)	deleterious(0.02)	neutral(0.390)	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD
GABRA6	2559	genome.wustl.edu	37	5	161116260	161116260	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000811.2	+1	reviewed	p.R149	1.000	313	0%	362	30.4%	0	-	-	-	-	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
GABRA6	2559	genome.wustl.edu	37	5	161117343	161117343	+	Silent	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000811.2	+1	reviewed	p.P270	0.084	163	0%	182	26.4%	0	-	-	-	-	HMMPfam_Neur_chan_memb,superfamily_Neurotransmitter-gated ion-channel transmembrane pore
GABRA1	2554	genome.wustl.edu	37	5	161317999	161317999	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000806.5	+1	reviewed	p.L267I	1.000	242	0%	212	28.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
GABRA1	2554	genome.wustl.edu	37	5	161318045	161318045	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000806.5	+1	reviewed	p.R282I	1.000	208	0%	200	31%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
GABRG2	2566	genome.wustl.edu	37	5	161530954	161530954	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198903.2	+1	reviewed	p.D271N	1.000	290	0%	346	32.4%	0	-	probably_damaging(0.986)	tolerated(0.21)	deleterious(0.478)	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
GABRG2	2566	genome.wustl.edu	37	5	161569172	161569172	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198903.2	+1	reviewed	p.D298Y	1.000	321	0.3%	428	34.8%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
CCNG1	900	genome.wustl.edu	37	5	162868236	162868236	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004060.3	+1	reviewed	p.K139N	1.000	180	0%	317	30.6%	36	44.4%	possibly_damaging(0.653)	deleterious(0.01)	deleterious(0.635)	HMMSmart_SM00385,HMMPfam_Cyclin_N,superfamily_Cyclin-like
HMMR	3161	genome.wustl.edu	37	5	162894731	162894731	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142556.1	+1	reviewed	p.D84Y	1.000	119	0%	155	27.7%	1	0%	probably_damaging(0.97)	deleterious(0.01)	deleterious(0.818)	NULL
MAT2B	27430	genome.wustl.edu	37	5	162943748	162943748	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000421814	+1	known	p.E251K	0.000	78	1.3%	120	29.2%	1	0%	unknown(0)	-	-	HMMPfam_RmlD_sub_bind
MAT2B	27430	genome.wustl.edu	37	5	162945229	162945229	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013283.3	+1	reviewed	p.R289C	0.996	131	0%	179	34.6%	87	35.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RmlD_sub_bind,superfamily_NAD(P)-binding Rossmann-fold domains
ENSG00000229119	0	genome.wustl.edu	37	5	165809371	165809371	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000449646	+1	known	p.H21R	1.000	67	0%	77	31.2%	5093	0%	-	-	-	HMMPfam_Ribosomal_60s
ODZ2	57451	genome.wustl.edu	37	5	166802359	166802359	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122679.1	+1	inferred	p.A128D	1.000	70	0%	59	33.9%	0	-	possibly_damaging(0.813)	deleterious(0)	deleterious(0.752)	HMMPfam_Ten_N
ODZ2	57451	genome.wustl.edu	37	5	167525034	167525034	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122679.1	+1	inferred	p.S572*	1.000	261	0%	401	33.2%	0	-	-	-	-	superfamily_EGF/Laminin
ODZ2	57451	genome.wustl.edu	37	5	167671470	167671470	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122679.1	+1	inferred	p.R1847W	0.999	94	0%	144	38.9%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	superfamily_Concanavalin A-like lectins/glucanases
ODZ2	57451	genome.wustl.edu	37	5	167674406	167674406	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122679.1	+1	inferred	p.F2145	0.980	145	0%	314	39.2%	0	-	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
ODZ2	57451	genome.wustl.edu	37	5	167689108	167689108	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122679.1	+1	inferred	p.L2531	1.000	68	0%	112	32.1%	0	-	-	-	-	NULL
ODZ2	57451	genome.wustl.edu	37	5	167689475	167689475	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122679.1	+1	inferred	p.T2653N	1.000	31	0%	49	38.8%	0	-	probably_damaging(0.978)	tolerated(0.08)	deleterious(0.720)	NULL
WWC1	23286	genome.wustl.edu	37	5	167882370	167882370	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015238.2	+1	reviewed	p.E890*	1.000	98	0%	147	34%	18	27.7%	-	-	-	NULL
RARS	5917	genome.wustl.edu	37	5	167915736	167915736	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002887.3	+1	reviewed	p.R59*	0.183	107	0%	120	32.5%	14	7.1%	-	-	-	superfamily_Arginyl-tRNA synthetase (ArgRS) N-terminal 'additional' domain
RARS	5917	genome.wustl.edu	37	5	167919725	167919725	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002887.3	+1	reviewed	p.Q81R	1.000	132	0%	196	34.7%	16	12.5%	benign(0.418)	tolerated(0.3)	neutral(0.164)	HMMPfam_Arg_tRNA_synt_N,superfamily_Arginyl-tRNA synthetase (ArgRS) N-terminal 'additional' domain
SLIT3	6586	genome.wustl.edu	37	5	168271610	168271610	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003062.2	-1	validated	p.A179V	1.000	198	0%	219	31.1%	2	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like
CCDC99	54908	genome.wustl.edu	37	5	169028352	169028352	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017785.4	+1	validated	p.D465N	0.000	155	0%	157	31.8%	14	57.1%	benign(0.009)	tolerated(0.53)	neutral(0.008)	NULL
DOCK2	1794	genome.wustl.edu	37	5	169081456	169081456	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004946.2	+1	validated	p.I31	0.919	69	0%	94	29.8%	0	-	-	-	-	HMMSmart_SM00326,superfamily_SH3-domain,HMMPfam_SH3_2
DOCK2	1794	genome.wustl.edu	37	5	169127065	169127065	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004946.2	+1	validated	p.R394C	1.000	87	0%	88	31.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DOCK2	1794	genome.wustl.edu	37	5	169174500	169174500	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004946.2	+1	validated	p.L790I	1.000	156	0%	139	32.4%	1	0%	benign(0.01)	tolerated(0.45)	neutral(0.013)	NULL
FAM196B	100131897	genome.wustl.edu	37	5	169291446	169291446	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001129891.1	-1	predicted	p.R480Q	1.000	140	0%	149	24.2%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
FAM196B	100131897	genome.wustl.edu	37	5	169310038	169310038	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001129891.1	-1	predicted	p.D289Y	0.937	165	0%	232	31%	0	-	probably_damaging(0.962)	deleterious(0)	deleterious(0.850)	NULL
DOCK2	1794	genome.wustl.edu	37	5	169494544	169494544	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004946.2	+1	validated	p.E1500*	1.000	231	0%	332	31.9%	2	0%	-	-	-	NULL
DOCK2	1794	genome.wustl.edu	37	5	169506113	169506113	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004946.2	+1	validated	p.A1710V	0.962	90	0%	202	33.7%	2	0%	benign(0)	tolerated(0.36)	neutral(0.020)	NULL
KCNIP1	30820	genome.wustl.edu	37	5	170148863	170148863	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034837.1	+1	reviewed	p.F106V	1.000	371	0%	481	33.7%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00054,superfamily_EF-hand
KCNIP1	30820	genome.wustl.edu	37	5	170160858	170160858	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034837.1	+1	reviewed	p.D198Y	1.000	256	0.4%	294	19.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand
GABRP	2568	genome.wustl.edu	37	5	170239056	170239056	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014211.2	+1	reviewed	p.I373F	1.000	178	0%	244	26.2%	0	-	benign(0.025)	tolerated(0.78)	neutral(0.002)	superfamily_Neurotransmitter-gated ion-channel transmembrane pore
RANBP17	64901	genome.wustl.edu	37	5	170395287	170395287	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022897.2	+1	provisional	p.R539Q	0.026	220	0%	143	36.4%	1	0%	benign(0.003)	tolerated(0.56)	neutral(0.006)	NULL
STK10	6793	genome.wustl.edu	37	5	171520793	171520793	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005990.3	-1	reviewed	p.P393S	0.001	68	0%	111	38.7%	6	16.6%	benign(0)	tolerated(0.66)	neutral(0.003)	NULL
EFCAB9	285588	genome.wustl.edu	37	5	171626397	171626397	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000398186	+1	known	p.F49L	0.995	81	0%	211	28.4%	0	-	possibly_damaging(0.942)	tolerated(0.15)	deleterious(0.628)	superfamily_SSF47473
STC2	8614	genome.wustl.edu	37	5	172752930	172752930	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003714.2	-1	reviewed	p.R79W	1.000	205	0%	288	31.9%	37	54%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_Stanniocalcin
STC2	8614	genome.wustl.edu	37	5	172752952	172752952	+	Silent	SNP	G	G	A	rs147198518		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003714.2	-1	reviewed	p.F71	1.000	177	0%	275	38.2%	26	50%	-	-	-	HMMPfam_Stanniocalcin
C5orf47	133491	genome.wustl.edu	37	5	173416305	173416305	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144954.1	+1	validated	p.A13	0.351	24	0%	16	43.8%	0	-	-	-	-	NULL
C5orf47	133491	genome.wustl.edu	37	5	173425231	173425231	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144954.1	+1	validated	p.K134T	0.949	87	0%	82	34.1%	0	-	probably_damaging(0.997)	tolerated(0.34)	deleterious(0.489)	NULL
LOC100127922	100127922	genome.wustl.edu	37	5	173988785	173988785	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342573.1	+1	model	p.D47N	0.632	9	0.000	27	0.444	2	0%	-	-	-	superfamily_Ubiquitin-like
ENSG00000248596	0	genome.wustl.edu	37	5	175602216	175602216	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000508056	-1	known	NULL	0.003	5	0.000	5	0.800	0	-	-	-	-	-
C5orf25	375484	genome.wustl.edu	37	5	175763757	175763757	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198567.4	+1	validated	p.L302M	0.967	157	0%	236	40.3%	4	50%	possibly_damaging(0.926)	deleterious(0)	deleterious(0.819)	NULL
ARL10	285598	genome.wustl.edu	37	5	175793400	175793400	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173664.4	+1	validated	p.D67	0.004	31	0%	56	35.7%	1	0%	-	-	-	HMMPfam_Arf,superfamily_SSF52540
SNCB	6620	genome.wustl.edu	37	5	176048218	176048218	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001502.1	-1	reviewed	p.P123	0.941	103	0%	149	32.9%	0	-	-	-	-	HMMPfam_Synuclein
UNC5A	90249	genome.wustl.edu	37	5	176305322	176305322	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133369.2	+1	validated	p.Y649*	1.000	80	0%	84	38.1%	1	0%	-	-	-	NULL
HK3	3101	genome.wustl.edu	37	5	176318107	176318107	+	Silent	SNP	C	C	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002115.2	-1	reviewed	p.G115	0.966	52	0%	64	40.6%	2	0%	-	-	-	HMMPfam_Hexokinase_1,superfamily_SSF53067
UIMC1	51720	genome.wustl.edu	37	5	176335689	176335689	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016290.3	-1	provisional	p.E561D	1.000	91	0%	116	31%	32	28.1%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	NULL
UIMC1	51720	genome.wustl.edu	37	5	176395581	176395581	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016290.3	-1	provisional	p.E392G	1.000	91	0%	157	36.3%	10	20%	probably_damaging(0.98)	deleterious(0.03)	deleterious(0.788)	NULL
UIMC1	51720	genome.wustl.edu	37	5	176395609	176395609	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016290.3	-1	provisional	p.S383R	0.998	101	0%	209	30.6%	9	88.8%	benign(0.157)	tolerated(0.12)	neutral(0.275)	NULL
NSD1	64324	genome.wustl.edu	37	5	176638500	176638500	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022455.4	+1	reviewed	p.F1034V	0.989	69	0%	175	41.7%	7	14.2%	benign(0.005)	deleterious(0.01)	neutral(0.406)	NULL
NSD1	64324	genome.wustl.edu	37	5	176709555	176709555	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022455.4	+1	reviewed	p.T1994	0.982	186	0%	315	35.2%	8	12.5%	-	-	-	HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain
RAB24	53917	genome.wustl.edu	37	5	176729476	176729476	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031677.2	-1	validated	p.G119S	1.000	110	0%	176	37.5%	81	41.9%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540
GRK6	2870	genome.wustl.edu	37	5	176860608	176860608	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002082.3	+1	reviewed	p.K223N	1.000	80	0%	204	39.2%	35	34.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
PROP1	5626	genome.wustl.edu	37	5	177422907	177422907	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006261.4	-1	reviewed	p.E10K	0.001	89	0%	94	38.3%	0	-	benign(0.014)	tolerated(0.18)	neutral(0.057)	NULL
AGXT2L2	85007	genome.wustl.edu	37	5	177642392	177642392	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153373.2	-1	validated	p.V323I	0.982	39	0%	44	29.5%	5	20%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Aminotran_3,superfamily_PLP-dependent transferases
CLK4	57396	genome.wustl.edu	37	5	178045558	178045558	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020666.2	-1	reviewed	p.S128L	1.000	131	0%	213	30.5%	9	11.1%	possibly_damaging(0.679)	tolerated(0.11)	deleterious(0.514)	NULL
ZNF354A	6940	genome.wustl.edu	37	5	178139258	178139258	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005649.2	-1	validated	p.R541*	0.174	241	0%	364	31.6%	12	41.6%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF354B	117608	genome.wustl.edu	37	5	178311278	178311278	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_058230.2	+1	validated	p.D609N	0.000	49	0%	53	28.3%	12	33.3%	benign(0)	tolerated(0.75)	neutral(0.002)	NULL
ZFP2	80108	genome.wustl.edu	37	5	178358901	178358901	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030613.2	+1	provisional	p.H196R	0.036	78	0%	108	33.3%	0	-	benign(0)	tolerated(0.35)	neutral(0.021)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZFP2	80108	genome.wustl.edu	37	5	178359302	178359302	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030613.2	+1	provisional	p.E330K	0.950	107	0.9%	147	20.4%	1	0%	benign(0.003)	tolerated(0.09)	neutral(0.296)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF454	285676	genome.wustl.edu	37	5	178392194	178392194	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182594.2	+1	validated	p.Q263H	1.000	65	0%	108	44.4%	0	-	possibly_damaging(0.936)	deleterious(0.03)	deleterious(0.746)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
GRM6	2916	genome.wustl.edu	37	5	178417669	178417669	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000843.3	-1	reviewed	p.K312N	1.000	39	2.6%	23	34.8%	0	-	probably_damaging(0.995)	tolerated(0.16)	deleterious(0.517)	HMMPfam_ANF_receptor,superfamily_SSF53822
ZNF879	345462	genome.wustl.edu	37	5	178460042	178460042	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136116.1	+1	provisional	p.I365L	0.911	70	0%	110	33.6%	0	-	benign(0.138)	deleterious(0.03)	neutral(0.376)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF354C	30832	genome.wustl.edu	37	5	178506419	178506419	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014594.1	+1	provisional	p.K329T	0.739	116	0%	159	30.8%	0	-	probably_damaging(0.994)	tolerated(0.34)	deleterious(0.475)	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667
RUFY1	80230	genome.wustl.edu	37	5	179020623	179020623	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025158.3	+1	validated	p.L464V	0.890	113	0%	235	25.5%	33	33.3%	benign(0.037)	tolerated(0.18)	neutral(0.058)	NULL
ENSG00000228259	0	genome.wustl.edu	37	5	179079080	179079080	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000425471	+1	known	p.C188Y	0.001	25	0%	39	23.1%	0	-	unknown(0)	tolerated(0.32)	-	NULL
LOC729595	729595	genome.wustl.edu	37	5	179121497	179121497	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001130734.2	+1	model	p.S100	0.985	6	0.000	16	0.250	1	0%	-	-	-	HMMPfam_HMG_box,HMMSmart_SM00398,superfamily_HMG-box
MAML1	9794	genome.wustl.edu	37	5	179193437	179193437	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014757.4	+1	reviewed	p.R476W	0.949	59	0%	116	38.8%	7	57.1%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
TBC1D9B	23061	genome.wustl.edu	37	5	179302027	179302027	+	Silent	SNP	G	G	A	rs140015158	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198868.2	-1	validated	p.I687	0.202	49	0%	78	42.3%	37	51.3%	-	-	-	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p
MAPK9	5601	genome.wustl.edu	37	5	179663507	179663507	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002752.4	-1	reviewed	p.N384	1.000	98	0%	198	35.9%	33	48.4%	-	-	-	NULL
ENSG00000245787	0	genome.wustl.edu	37	5	180275750	180275750	+	RNA	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000499434	+1	novel	NULL	0.058	78	0%	97	33%	18	66.6%	-	-	-	-
ZFP62	643836	genome.wustl.edu	37	5	180276362	180276362	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152283.4	-1	validated	p.F651L	0.999	179	0%	196	30.1%	12	41.6%	probably_damaging(0.988)	tolerated(0.63)	neutral(0.441)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
BTNL8	79908	genome.wustl.edu	37	5	180338455	180338455	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040462.2	+1	validated	p.G172*	0.000	157	0%	189	36%	0	-	-	-	-	HMMSmart_SM00409,superfamily_Immunoglobulin
BTNL3	10917	genome.wustl.edu	37	5	180431744	180431744	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_197975.1	+1	validated	p.D282Y	0.028	205	0%	306	34.6%	0	-	benign(0)	tolerated(0.08)	neutral(0.300)	NULL
BTNL9	153579	genome.wustl.edu	37	5	180475212	180475212	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152547.4	+1	validated	p.G132V	0.070	52	0%	45	37.8%	1	0%	probably_damaging(1)	tolerated(0.5)	deleterious(0.510)	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
OR2V1	26693	genome.wustl.edu	37	5	180552190	180552190	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000329365	-1	known	p.A39T	0.212	201	0.5%	282	32.3%	0	-	benign(0.201)	deleterious(0.03)	neutral(0.384)	superfamily_SSF81321
OR2V2	285659	genome.wustl.edu	37	5	180582241	180582241	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206880.1	+1	provisional	p.I100T	0.002	223	0.4%	348	32.5%	0	-	benign(0.001)	tolerated(0.67)	neutral(0.003)	HMMPfam_7tm_1,superfamily_SSF81321
GNB2L1	10399	genome.wustl.edu	37	5	180666574	180666574	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006098.4	-1	validated	p.S146R	1.000	56	0%	81	34.6%	3602	42.2%	benign(0.059)	deleterious(0.02)	neutral(0.387)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
EXOC2	55770	genome.wustl.edu	37	6	637805	637805	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018303.4	-1	reviewed	p.R5Q	0.999	87	0%	113	41.6%	6	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Ig_E-set
FOXC1	2296	genome.wustl.edu	37	6	1611149	1611149	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001453.2	+1	reviewed	p.D157Y	1.000	78	0%	99	33.3%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Fork_head,HMMSmart_FH,superfamily_SSF46785
WRNIP1	56897	genome.wustl.edu	37	6	2770372	2770372	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020135.2	+1	reviewed	p.V345M	1.000	108	0%	114	32.5%	34	29.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
SERPINB6	5269	genome.wustl.edu	37	6	2955838	2955838	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004568.4	-1	validated	p.E78K	0.399	60	0%	65	36.9%	21	4.7%	benign(0.007)	tolerated(0.5)	neutral(0.010)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
PXDC1	221749	genome.wustl.edu	37	6	3737397	3737397	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183373.3	-1	validated	p.E128K	1.000	229	0%	381	34.1%	10	0%	probably_damaging(0.987)	tolerated(0.25)	deleterious(0.473)	superfamily_PX
PRPF4B	8899	genome.wustl.edu	37	6	4037746	4037746	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003913.4	+1	reviewed	p.R452C	1.000	109	0%	181	32%	11	63.6%	unknown(0)	tolerated(0.05)	-	NULL
FAM217A	222826	genome.wustl.edu	37	6	4068981	4068981	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173563.1	-1	predicted	p.S492	0.048	168	0%	207	32.4%	0	-	-	-	-	NULL
CDYL	9425	genome.wustl.edu	37	6	4716006	4716006	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026590.1	+1	reviewed	NULL	0.003	75	0%	132	25%	0	-	-	-	-	-
CDYL	9425	genome.wustl.edu	37	6	4954458	4954458	+	RNA	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026590.1	+1	reviewed	NULL	1.000	21	0%	22	36.4%	10	30%	-	-	-	-
F13A1	2162	genome.wustl.edu	37	6	6174837	6174837	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000129.3	-1	reviewed	p.D575N	0.000	305	0%	556	29.1%	1	0%	benign(0)	tolerated(0.32)	neutral(0.024)	HMMPfam_Transglut_C,superfamily_Transglut_C
F13A1	2162	genome.wustl.edu	37	6	6175063	6175063	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000129.3	-1	reviewed	p.L499	1.000	201	0%	339	38.6%	0	-	-	-	-	superfamily_SSF54001
CAGE1	285782	genome.wustl.edu	37	6	7356338	7356338	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000502583	-1	known	p.E740*	0.984	510	0.2%	724	31.1%	0	-	-	-	-	NULL
CAGE1	285782	genome.wustl.edu	37	6	7373751	7373751	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_205864.2	-1	validated	p.S298F	0.001	264	0%	452	33.4%	0	-	possibly_damaging(0.722)	deleterious(0.01)	deleterious(0.667)	NULL
RIOK1	83732	genome.wustl.edu	37	6	7395353	7395353	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031480.2	+1	reviewed	p.K115T	1.000	105	0%	169	33.7%	3	33.3%	possibly_damaging(0.95)	deleterious(0.01)	deleterious(0.799)	NULL
DSP	1832	genome.wustl.edu	37	6	7559485	7559485	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004415.2	+1	reviewed	p.R150Q	1.000	126	0%	131	32.8%	3	0%	probably_damaging(0.997)	tolerated(0.34)	deleterious(0.489)	superfamily_Spectrin repeat
DSP	1832	genome.wustl.edu	37	6	7574469	7574469	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004415.2	+1	reviewed	p.D761Y	1.000	147	0%	199	29.1%	7	0%	possibly_damaging(0.66)	deleterious(0.02)	deleterious(0.616)	superfamily_Prefoldin
DSP	1832	genome.wustl.edu	37	6	7579739	7579739	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004415.2	+1	reviewed	p.E1106*	0.992	128	0%	162	31.5%	7	0%	-	-	-	NULL
DSP	1832	genome.wustl.edu	37	6	7583974	7583974	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004415.2	+1	reviewed	p.R2160Q	0.988	91	0%	97	19.6%	7	42.8%	possibly_damaging(0.883)	tolerated(0.55)	neutral(0.352)	HMMPfam_Plectin,superfamily_Plakin repeat
DSP	1832	genome.wustl.edu	37	6	7584331	7584331	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004415.2	+1	reviewed	p.K2279T	1.000	158	0%	227	35.7%	28	7.1%	benign(0.36)	deleterious(0)	deleterious(0.559)	HMMPfam_Plectin,HMMSmart_SM00250,superfamily_Plakin repeat
SNRNP48	154007	genome.wustl.edu	37	6	7594382	7594382	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152551.3	+1	validated	p.S107	0.292	92	0%	66	30.3%	3	33.3%	-	-	-	NULL
TXNDC5	81567	genome.wustl.edu	37	6	7884593	7884593	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030810.2	-1	reviewed	p.S392L	1.000	146	0%	193	26.4%	359	46.2%	benign(0.385)	tolerated(0.07)	neutral(0.442)	superfamily_Thiordxn-like_fd,HMMPfam_Thioredoxin
MUTED	63915	genome.wustl.edu	37	6	8062847	8062847	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201280.1	-1	reviewed	p.L39I	1.000	87	0%	93	23.7%	1	0%	benign(0.196)	tolerated(0.86)	neutral(0.019)	NULL
SLC35B3	51000	genome.wustl.edu	37	6	8428132	8428132	+	Nonstop_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000426876	-1	known	p.*219E	0.000	66	0%	56	35.7%	1	0%	-	-	-	NULL
GCNT2	2651	genome.wustl.edu	37	6	10556851	10556851	+	Missense_Mutation	SNP	G	G	T	rs55798487		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001491.2	+1	reviewed	p.M65I	0.000	117	0%	170	30.6%	1	100%	benign(0)	tolerated(0.32)	neutral(0.024)	NULL
PAK1IP1	55003	genome.wustl.edu	37	6	10709596	10709596	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017906.2	+1	validated	p.E364*	0.000	90	0%	207	32.4%	35	37.1%	-	-	-	superfamily_WD40_like
MAK	4117	genome.wustl.edu	37	6	10770352	10770352	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005906.3	-1	reviewed	p.T570M	0.002	147	0%	313	37.1%	3	0%	possibly_damaging(0.714)	deleterious(0.01)	deleterious(0.663)	NULL
SYCP2L	221711	genome.wustl.edu	37	6	10935314	10935314	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040274.2	+1	validated	p.E569D	0.090	152	0.7%	208	36.1%	7	57.1%	benign(0.033)	tolerated(0.46)	neutral(0.013)	NULL
ELOVL2	54898	genome.wustl.edu	37	6	10989947	10989947	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017770.3	-1	validated	p.F252V	1.000	101	0%	161	42.9%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ELO
ELOVL2	54898	genome.wustl.edu	37	6	10990005	10990005	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017770.3	-1	validated	p.F232	0.306	98	0%	139	30.9%	0	-	-	-	-	HMMPfam_ELO
ELOVL2	54898	genome.wustl.edu	37	6	11005684	11005684	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017770.3	-1	validated	p.R59I	1.000	114	0%	175	37.7%	0	-	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	HMMPfam_ELO
HIVEP1	3096	genome.wustl.edu	37	6	12120300	12120300	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002114.2	+1	validated	p.S91L	0.001	175	0%	238	31.1%	0	-	benign(0.184)	deleterious(0.03)	neutral(0.382)	NULL
HIVEP1	3096	genome.wustl.edu	37	6	12121985	12121985	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002114.2	+1	validated	p.D653N	0.998	71	0%	88	33%	0	-	probably_damaging(0.992)	deleterious(0.02)	deleterious(0.831)	NULL
HIVEP1	3096	genome.wustl.edu	37	6	12124263	12124263	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002114.2	+1	validated	p.R1412Q	0.000	108	0%	181	33.1%	1	0%	benign(0.008)	tolerated(0.47)	neutral(0.011)	NULL
EDN1	1906	genome.wustl.edu	37	6	12294225	12294225	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001955.4	+1	reviewed	p.E95D	1.000	66	0%	108	33.3%	1	0%	benign(0.275)	tolerated(0.13)	neutral(0.282)	NULL
SIRT5	23408	genome.wustl.edu	37	6	13588577	13588577	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012241.3	+1	reviewed	p.R44*	1.000	167	0%	287	33.4%	2	0%	-	-	-	superfamily_DHS-like NAD/FAD-binding domain
RNF182	221687	genome.wustl.edu	37	6	13977801	13977801	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152737.3	+1	validated	p.E151*	0.203	258	0%	168	28.6%	1	0%	-	-	-	NULL
DTNBP1	84062	genome.wustl.edu	37	6	15652354	15652354	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032122.3	-1	reviewed	p.D25A	1.000	159	0%	207	34.8%	14	35.7%	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	NULL
MYLIP	29116	genome.wustl.edu	37	6	16145248	16145248	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013262.3	+1	reviewed	p.K316	0.910	127	0%	147	27.2%	30	40%	-	-	-	NULL
GMPR	2766	genome.wustl.edu	37	6	16254802	16254802	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006877.3	+1	reviewed	p.V101M	1.000	215	0.5%	510	27.3%	4	0%	probably_damaging(0.956)	deleterious(0)	deleterious(0.844)	HMMPfam_IMPDH,superfamily_SSF51412
ATXN1	6310	genome.wustl.edu	37	6	16307035	16307035	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000332.3	-1	reviewed	p.S658*	1.000	95	0%	200	41.5%	2	0%	-	-	-	HMMSmart_SM00536,HMMPfam_AXH,superfamily_AXH domain
CAP2	10486	genome.wustl.edu	37	6	17426877	17426877	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006366.2	+1	reviewed	p.F60L	1.000	153	0%	194	31.4%	0	-	possibly_damaging(0.649)	tolerated(0.1)	deleterious(0.514)	HMMPfam_CAP_N,superfamily_N-terminal domain of adenylylcyclase associated protein CAP
FAM8A1	51439	genome.wustl.edu	37	6	17608450	17608450	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016255.2	+1	validated	p.K374N	1.000	269	0%	385	29.9%	8	12.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RDD
NUP153	9972	genome.wustl.edu	37	6	17629745	17629745	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005124.2	-1	reviewed	p.S895	0.000	78	0%	130	33.8%	15	46.6%	-	-	-	NULL
NUP153	9972	genome.wustl.edu	37	6	17688743	17688743	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005124.2	-1	reviewed	p.S73N	0.008	174	0%	288	32.3%	3	66.6%	benign(0.002)	tolerated(1)	-	NULL
NHLRC1	378884	genome.wustl.edu	37	6	18121746	18121746	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198586.2	-1	reviewed	p.S364	0.889	56	0%	102	38.2%	7	57.1%	-	-	-	HMMPfam_NHL,superfamily_SSF101898
NHLRC1	378884	genome.wustl.edu	37	6	18122160	18122160	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198586.2	-1	reviewed	p.Q226H	0.007	38	0%	80	30%	3	66.6%	benign(0)	tolerated(0.24)	neutral(0.037)	HMMPfam_NHL,superfamily_SSF101898
DEK	7913	genome.wustl.edu	37	6	18226431	18226431	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003472.3	-1	reviewed	p.D364Y	1.000	74	0%	75	32%	51	52.9%	probably_damaging(0.992)	deleterious(0.04)	deleterious(0.796)	HMMPfam_DEK_C,superfamily_DEK C-terminal domain
MBOAT1	154141	genome.wustl.edu	37	6	20118754	20118754	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080480.1	-1	provisional	p.A309T	1.000	221	0%	318	34.3%	5	20%	possibly_damaging(0.924)	tolerated(0.15)	deleterious(0.614)	HMMPfam_MBOAT
MBOAT1	154141	genome.wustl.edu	37	6	20124769	20124769	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080480.1	-1	provisional	p.T259	0.961	81	0%	187	29.4%	13	30.7%	-	-	-	HMMPfam_MBOAT
E2F3	1871	genome.wustl.edu	37	6	20480168	20480168	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001949.3	+1	reviewed	p.R162Q	0.993	69	0%	141	19.9%	0	-	benign(0.196)	tolerated(0.07)	neutral(0.338)	NULL
CDKAL1	54901	genome.wustl.edu	37	6	21198326	21198326	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017774.3	+1	reviewed	p.F458L	1.000	177	0%	245	30.6%	7	14.2%	benign(0.124)	tolerated(0.65)	neutral(0.013)	HMMPfam_TRAM,superfamily_Radical SAM enzymes
PRL	5617	genome.wustl.edu	37	6	22294638	22294638	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000948.4	-1	validated	p.F68	0.997	99	0%	178	33.1%	1	0%	-	-	-	HMMPfam_Hormone_1,superfamily_4-helical cytokines
PRL	5617	genome.wustl.edu	37	6	22294729	22294729	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000948.4	-1	validated	p.R38Q	0.940	96	0%	89	42.7%	1	0%	benign(0.049)	tolerated(0.13)	neutral(0.256)	HMMPfam_Hormone_1,superfamily_4-helical cytokines
NRSN1	140767	genome.wustl.edu	37	6	24146098	24146098	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080723.4	+1	validated	p.A171V	1.000	121	0%	119	32.8%	1	0%	benign(0.045)	tolerated(0.09)	neutral(0.299)	NULL
GPLD1	2822	genome.wustl.edu	37	6	24429315	24429315	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001503.2	-1	reviewed	p.S823Y	0.995	112	0%	166	30.1%	3	66.6%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
GPLD1	2822	genome.wustl.edu	37	6	24437388	24437388	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001503.2	-1	reviewed	p.R717Q	0.079	106	0%	240	39.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00191,superfamily_Integrin alpha N-terminal domain
KIAA0319	9856	genome.wustl.edu	37	6	24551738	24551738	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014809.3	-1	reviewed	p.K988N	1.000	531	0%	845	34.1%	0	-	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
KIAA0319	9856	genome.wustl.edu	37	6	24589010	24589010	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014809.3	-1	reviewed	p.L269I	1.000	99	0%	117	33.3%	0	-	benign(0.261)	tolerated(0.54)	neutral(0.035)	NULL
TDP2	51567	genome.wustl.edu	37	6	24651192	24651192	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016614.2	-1	reviewed	p.L305I	0.174	200	0%	284	34.9%	23	30.4%	possibly_damaging(0.696)	tolerated(0.59)	neutral(0.254)	HMMPfam_Exo_endo_phos,superfamily_Exo_endo_phos
FAM65B	9750	genome.wustl.edu	37	6	24843296	24843296	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014722.2	-1	validated	p.T572A	1.000	156	0%	209	37.8%	2	0%	probably_damaging(0.967)	tolerated(0.53)	neutral(0.416)	NULL
FAM65B	9750	genome.wustl.edu	37	6	24873896	24873896	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014722.2	-1	validated	p.Y78F	1.000	289	0%	458	35.8%	0	-	benign(0.003)	tolerated(0.7)	neutral(0.002)	NULL
SCGN	10590	genome.wustl.edu	37	6	25661855	25661855	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006998.3	+1	reviewed	p.R77C	0.116	232	0%	247	32.8%	0	-	benign(0.019)	deleterious(0.02)	neutral(0.384)	superfamily_EF-hand
SCGN	10590	genome.wustl.edu	37	6	25701492	25701492	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006998.3	+1	reviewed	p.D254N	1.000	172	0.6%	223	36.8%	0	-	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	HMMSmart_SM00054,PatternScan_EF_HAND_1,superfamily_EF-hand
SLC17A1	6568	genome.wustl.edu	37	6	25813344	25813344	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005074.3	-1	validated	p.I238	0.630	328	0%	485	29.9%	0	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
HFE	3077	genome.wustl.edu	37	6	26091298	26091298	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000410.3	+1	reviewed	p.F102	0.999	86	0%	171	35.1%	2	50%	-	-	-	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain
HFE	3077	genome.wustl.edu	37	6	26091327	26091327	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000410.3	+1	reviewed	p.S112I	0.997	64	0%	140	33.6%	3	0%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain
HIST1H1T	3010	genome.wustl.edu	37	6	26107819	26107819	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005323.3	-1	reviewed	p.R168I	0.570	199	0%	415	29.4%	0	-	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
BTN2A2	10385	genome.wustl.edu	37	6	26392790	26392790	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006995.3	+1	reviewed	p.E389D	0.001	273	0%	486	31.1%	8	37.5%	benign(0.124)	tolerated(0.13)	neutral(0.263)	HMMPfam_SPRY,HMMSmart_SM00449
ENSG00000250311	0	genome.wustl.edu	37	6	26478341	26478341	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000511597	-1	known	NULL	0.000	10	0%	15	26.7%	0	-	-	-	-	-
BTN1A1	696	genome.wustl.edu	37	6	26509162	26509162	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001732.2	+1	validated	p.F447L	0.864	77	0%	100	35%	0	-	probably_damaging(0.986)	deleterious(0.01)	deleterious(0.840)	HMMPfam_SPRY,HMMSmart_SM00449
ABT1	29777	genome.wustl.edu	37	6	26598743	26598743	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013375.2	+1	reviewed	p.G230E	0.026	30	0%	41	26.8%	68	42.6%	benign(0.044)	tolerated(0.62)	neutral(0.007)	NULL
HIST1H2AG	8969	genome.wustl.edu	37	6	27101097	27101097	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021064.4	+1	reviewed	p.H83N	1.000	156	0%	235	34%	9	77.7%	possibly_damaging(0.63)	deleterious(0)	deleterious(0.664)	HMMSmart_SM00414,HMMPfam_Histone,superfamily_Histone-fold
POM121L2	94026	genome.wustl.edu	37	6	27277410	27277410	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000444565	-1	known	p.G847D	0.000	84	0%	98	30.6%	0	-	benign(0.001)	tolerated(0.79)	neutral(0.001)	NULL
POM121L2	94026	genome.wustl.edu	37	6	27279643	27279643	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000444565	-1	known	p.R103W	0.001	73	0%	83	33.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZNF391	346157	genome.wustl.edu	37	6	27368872	27368872	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001076781.1	+1	validated	p.R241	0.000	127	0%	242	31%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF184	7738	genome.wustl.edu	37	6	27419787	27419787	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007149.2	-1	validated	p.L517	0.000	177	0%	206	39.8%	20	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF184	7738	genome.wustl.edu	37	6	27420529	27420529	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007149.2	-1	validated	p.R270I	1.000	291	0%	251	31.5%	7	85.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
HIST1H3J	8356	genome.wustl.edu	37	6	27858252	27858252	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003535.2	-1	reviewed	p.D107Y	1.000	46	0%	45	24.4%	2	100%	probably_damaging(1)	-	-	HMMSmart_SM00428,HMMPfam_Histone,superfamily_Histone-fold
OR2B2	81697	genome.wustl.edu	37	6	27879037	27879037	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033057.2	-1	validated	p.R354I	0.000	68	0%	67	29.9%	0	-	unknown(0)	deleterious(0)	-	NULL
OR2B2	81697	genome.wustl.edu	37	6	27879515	27879515	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033057.2	-1	validated	p.N195H	0.988	103	0%	158	30.4%	0	-	possibly_damaging(0.952)	deleterious(0.02)	deleterious(0.778)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR2B6	26212	genome.wustl.edu	37	6	27925655	27925655	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012367.1	+1	provisional	p.L213F	0.001	308	0%	244	27.9%	5	60%	benign(0.025)	tolerated(0.16)	neutral(0.060)	HMMPfam_7tm_1,superfamily_SSF81321
ZNF192	7745	genome.wustl.edu	37	6	28117263	28117263	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000457389	+1	known	p.S145Y	0.998	178	0%	242	35.5%	4	50%	possibly_damaging(0.819)	tolerated(0.07)	deleterious(0.629)	HMMSmart_SCAN
ZNF192	7745	genome.wustl.edu	37	6	28121755	28121755	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006298.2	+1	validated	p.R566I	1.000	104	0%	145	33.1%	1	0%	probably_damaging(0.977)	deleterious(0)	deleterious(0.863)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF193	7746	genome.wustl.edu	37	6	28195028	28195028	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006299.3	+1	provisional	p.R56*	0.006	63	1.6%	124	30.6%	10	50%	-	-	-	HMMPfam_SCAN,HMMSmart_SM00431
ZKSCAN4	387032	genome.wustl.edu	37	6	28212968	28212968	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019110.3	-1	provisional	p.K522Q	1.000	214	0.5%	235	28.9%	6	33.3%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
NKAPL	222698	genome.wustl.edu	37	6	28228143	28228143	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007531.1	+1	provisional	p.G332S	1.000	216	0%	406	33%	1	0%	benign(0.032)	tolerated(0.08)	neutral(0.301)	HMMPfam_DUF926
NKAPL	222698	genome.wustl.edu	37	6	28228338	28228338	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007531.1	+1	provisional	p.K397Q	1.000	149	0%	249	29.7%	0	-	probably_damaging(0.998)	tolerated(0.1)	deleterious(0.761)	NULL
ZNF187	7741	genome.wustl.edu	37	6	28244500	28244500	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152736.4	+1	validated	p.R221Q	0.002	141	0%	225	28%	1	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
PGBD1	84547	genome.wustl.edu	37	6	28251950	28251950	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032507.3	+1	reviewed	p.E120D	0.893	104	0%	215	36.3%	3	33.3%	possibly_damaging(0.945)	deleterious(0.03)	deleterious(0.754)	HMMPfam_SCAN,HMMSmart_SCAN
ZNF323	64288	genome.wustl.edu	37	6	28297345	28297345	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135215.1	-1	validated	p.R39Q	0.075	104	0%	117	28.2%	13	30.7%	possibly_damaging(0.867)	deleterious(0.01)	deleterious(0.742)	HMMPfam_SCAN,HMMSmart_SCAN
ZKSCAN3	80317	genome.wustl.edu	37	6	28333565	28333565	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024493.2	+1	validated	p.E374*	0.859	239	0%	285	32.3%	11	45.4%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZSCAN12	9753	genome.wustl.edu	37	6	28350368	28350368	+	Missense_Mutation	SNP	C	C	A	rs35577079		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000361028	-1	known	p.K571N	1.000	311	0%	428	36.2%	1	0%	benign(0.202)	tolerated(0.07)	neutral(0.339)	NULL
GPX5	2880	genome.wustl.edu	37	6	28499659	28499659	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001509.2	+1	reviewed	p.L116I	1.000	107	0%	114	23.7%	0	-	probably_damaging(0.985)	deleterious(0.03)	deleterious(0.796)	HMMPfam_GSHPx,superfamily_Thiordxn-like_fd
OR2B3	442184	genome.wustl.edu	37	6	29054412	29054412	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005226.2	-1	validated	p.L205R	0.004	56	0%	92	38%	0	-	possibly_damaging(0.928)	deleterious(0)	deleterious(0.820)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR2J1	442185	genome.wustl.edu	37	6	29069539	29069539	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000377171	+1	known	p.F274L	0.921	111	0%	106	26.4%	0	-	possibly_damaging(0.913)	tolerated(0.26)	neutral(0.398)	HMMPfam_7tm_1,superfamily_SSF81321
OR5V1	81696	genome.wustl.edu	37	6	29323931	29323931	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030876.5	-1	validated	p.I14	0.285	100	0%	98	37.8%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
MAS1L	116511	genome.wustl.edu	37	6	29454822	29454822	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052967.1	-1	provisional	p.I286M	0.000	75	0%	66	22.7%	0	-	benign(0.345)	deleterious(0.01)	deleterious(0.515)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
MAS1L	116511	genome.wustl.edu	37	6	29455512	29455512	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052967.1	-1	provisional	p.T56	0.000	106	0.9%	115	24.3%	0	-	-	-	-	NULL
TRIM15	89870	genome.wustl.edu	37	6	30138316	30138316	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033229.2	+1	reviewed	p.S257Y	1.000	136	0%	222	33.8%	0	-	probably_damaging(0.998)	tolerated(1)	deleterious(0.474)	NULL
DPCR1	135656	genome.wustl.edu	37	6	30919440	30919440	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000462446	+1	known	p.E1067K	0.001	266	0%	664	30.9%	0	-	probably_damaging(0.987)	tolerated(0.22)	deleterious(0.478)	NULL
DPCR1	135656	genome.wustl.edu	37	6	30919931	30919931	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080870.3	+1	validated	p.E72D	0.006	178	0%	381	32%	0	-	benign(0.007)	tolerated(0.28)	neutral(0.032)	NULL
LOC100287207	100287207	genome.wustl.edu	37	6	30954995	30954995	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342619.1	-1	model	p.E136*	0.001	102	0%	167	28.1%	0	-	unknown(0)	deleterious(0)	-	NULL
CDSN	1041	genome.wustl.edu	37	6	31084937	31084937	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001264.3	-1	reviewed	p.S152N	0.002	25	0%	35	48.6%	1	100%	unknown(0)	tolerated(0.08)	-	NULL
HLA-B	3106	genome.wustl.edu	37	6	31323232	31323232	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005514.6	-1	reviewed	p.E253K	0.958	131	0%	234	32.9%	1128	0.1%	benign(0.336)	deleterious(0)	deleterious(0.550)	HMMPfam_C1-set,HMMSmart_SM00407,superfamily_Immunoglobulin
HCP5	10866	genome.wustl.edu	37	6	31431644	31431644	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006674.3	+1	validated	p.E67K	0.037	99	0%	83	33.7%	2	0%	-	-	-	NULL
MICB	4277	genome.wustl.edu	37	6	31477639	31477639	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005931.3	+1	reviewed	p.P369S	0.004	129	0%	205	28.8%	2	50%	benign(0.252)	deleterious(0)	deleterious(0.471)	NULL
PRRC2A	7916	genome.wustl.edu	37	6	31593365	31593365	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080686.2	+1	reviewed	p.Y246H	0.998	140	0%	234	33.8%	49	53%	unknown(0)	deleterious(0)	-	NULL
MSH5	4439	genome.wustl.edu	37	6	31711942	31711942	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025259.5	+1	reviewed	p.P188	0.001	122	0%	190	27.9%	0	-	-	-	-	NULL
HSPA1L	3305	genome.wustl.edu	37	6	31778127	31778127	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005527.3	-1	reviewed	p.K541N	0.998	76	1.3%	151	37.1%	1	0%	probably_damaging(0.968)	deleterious(0)	deleterious(0.855)	HMMPfam_HSP70,superfamily_SSF100920,superfamily_SSF100934
SLC44A4	80736	genome.wustl.edu	37	6	31833104	31833104	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025257.2	-1	reviewed	p.R583Q	1.000	57	0%	146	32.9%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_DUF580
C2	717	genome.wustl.edu	37	6	31901471	31901471	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000063.4	+1	reviewed	p.R176H	1.000	6	0.000	12	0.500	8	0%	benign(0.045)	tolerated(0.95)	neutral(0.003)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
C2	717	genome.wustl.edu	37	6	31902133	31902133	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000418949	+1	known	p.L302	0.000	31	0%	62	21%	0	-	-	-	-	NULL
STK19	8859	genome.wustl.edu	37	6	31938988	31938988	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026717.1	+1	validated	NULL	0.000	5	0.000	10	0.400	3	33.3%	-	-	-	-
CYP21A2	1589	genome.wustl.edu	37	6	32007809	32007809	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000500.5	+1	reviewed	p.D256N	1.000	25	0%	44	29.5%	1	0%	probably_damaging(0.985)	tolerated(0.26)	neutral(0.466)	HMMPfam_p450,superfamily_Cytochrome_P450
TNXB	7148	genome.wustl.edu	37	6	32029351	32029351	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019105.6	-1	reviewed	p.D2439N	0.506	24	0%	39	38.5%	0	-	probably_damaging(0.991)	tolerated(0.15)	deleterious(0.685)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
TNXB	7148	genome.wustl.edu	37	6	32035471	32035471	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019105.6	-1	reviewed	p.R2171C	0.184	64	0%	83	34.9%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
TNXB	7148	genome.wustl.edu	37	6	32063395	32063395	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019105.6	-1	reviewed	p.C745	0.870	28	0%	47	29.8%	0	-	-	-	-	HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_EGF/Laminin
NOTCH4	4855	genome.wustl.edu	37	6	32188204	32188204	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004557.3	-1	reviewed	p.C379	1.000	10	0%	18	38.9%	1	0%	-	-	-	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_CA,superfamily_EGF/Laminin
HLA-DQB2	3120	genome.wustl.edu	37	6	32729453	32729453	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000427449	-1	known	p.R115Q	0.000	8	0.000	15	0.400	0	-	-	-	-	superfamily_MHC antigen-recognition domain
TAP1	6890	genome.wustl.edu	37	6	32816567	32816567	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000593.5	-1	reviewed	p.E536D	1.000	263	0%	393	32.6%	37	16.2%	probably_damaging(0.973)	tolerated(0.1)	deleterious(0.702)	superfamily_ABC_TM_1
COL11A2	1302	genome.wustl.edu	37	6	33154441	33154441	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080680.2	-1	reviewed	p.R254I	0.736	477	0%	775	24.4%	0	-	possibly_damaging(0.628)	tolerated(0.06)	deleterious(0.541)	NULL
WDR46	9277	genome.wustl.edu	37	6	33255751	33255751	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005452.5	-1	validated	p.R205Q	0.975	155	0%	336	32.1%	60	35%	possibly_damaging(0.62)	deleterious(0.03)	deleterious(0.581)	superfamily_WD40 repeat-like
RGL2	5863	genome.wustl.edu	37	6	33263183	33263183	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004761.3	-1	validated	p.R346Q	0.963	64	0%	101	29.7%	27	59.2%	possibly_damaging(0.666)	deleterious(0)	deleterious(0.680)	HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF
DAXX	1616	genome.wustl.edu	37	6	33287938	33287938	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001141970.1	-1	reviewed	p.D451Y	0.506	143	0%	321	30.8%	48	37.5%	unknown(0)	deleterious(0.01)	-	HMMPfam_Daxx
PHF1	5252	genome.wustl.edu	37	6	33383412	33383412	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002636.4	+1	reviewed	p.P425L	0.888	84	0%	122	31.1%	56	28.5%	unknown(0)	deleterious(0)	-	NULL
ZBTB9	221504	genome.wustl.edu	37	6	33423747	33423747	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152735.3	+1	validated	p.F290	0.558	35	0%	116	32.8%	5	40%	-	-	-	NULL
IP6K3	117283	genome.wustl.edu	37	6	33703141	33703141	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142883.1	-1	reviewed	p.T38M	1.000	46	0%	36	33.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SAICAR synthase-like
MLN	4295	genome.wustl.edu	37	6	33763289	33763289	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002418.2	-1	reviewed	p.P110S	0.010	116	0%	146	34.9%	0	-	possibly_damaging(0.482)	tolerated(0.11)	neutral(0.431)	HMMPfam_Motilin_assoc
SNRPC	6631	genome.wustl.edu	37	6	34735774	34735774	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003093.2	+1	reviewed	p.P84S	0.998	123	0%	202	33.7%	278	43.5%	unknown(0)	tolerated(0.56)	-	NULL
UHRF1BP1	54887	genome.wustl.edu	37	6	34802060	34802060	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017754.3	+1	validated	p.K135N	1.000	174	0%	341	32%	2	100%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
UHRF1BP1	54887	genome.wustl.edu	37	6	34802176	34802176	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017754.3	+1	validated	p.R174Q	1.000	112	0%	209	29.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
UHRF1BP1	54887	genome.wustl.edu	37	6	34826461	34826461	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017754.3	+1	validated	p.K776N	0.997	36	0%	80	32.5%	1	0%	benign(0.358)	tolerated(0.51)	neutral(0.122)	NULL
UHRF1BP1	54887	genome.wustl.edu	37	6	34840165	34840165	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017754.3	+1	validated	p.E1425*	0.994	112	0%	181	27.1%	2	100%	-	-	-	NULL
ANKS1A	23294	genome.wustl.edu	37	6	34985818	34985818	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015245.2	+1	validated	p.F664	0.981	14	0%	22	27.3%	9	55.5%	-	-	-	NULL
SCUBE3	222663	genome.wustl.edu	37	6	35216380	35216380	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152753.2	+1	provisional	p.Q960H	1.000	123	1.6%	209	27.8%	0	-	benign(0.003)	tolerated(0.09)	neutral(0.296)	NULL
RPL10A	4736	genome.wustl.edu	37	6	35437209	35437209	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007104.4	+1	reviewed	p.Q71	1.000	104	0%	207	34.3%	2936	43.6%	-	-	-	HMMPfam_Ribosomal_L1,superfamily_Ribosomal protein L1
SLC26A8	116369	genome.wustl.edu	37	6	35980073	35980073	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052961.2	-1	reviewed	p.K89Q	1.000	149	0%	383	33.4%	0	-	unknown(0)	-	-	NULL
SLC26A8	116369	genome.wustl.edu	37	6	35980127	35980127	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052961.2	-1	reviewed	p.R71*	0.026	133	0%	303	30.7%	0	-	-	-	-	NULL
MAPK14	1432	genome.wustl.edu	37	6	36075361	36075361	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001315.2	+1	reviewed	p.D324A	1.000	143	0%	241	34%	23	43.4%	probably_damaging(0.993)	deleterious(0.01)	deleterious(0.856)	superfamily_Protein kinase-like (PK-like)
BRPF3	27154	genome.wustl.edu	37	6	36168215	36168215	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015695.2	+1	validated	p.R39Q	0.998	74	0%	165	31.5%	5	20%	possibly_damaging(0.855)	tolerated(0.09)	deleterious(0.627)	NULL
PNPLA1	285848	genome.wustl.edu	37	6	36270162	36270162	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145716.1	+1	validated	p.A348T	0.000	121	0%	184	29.3%	0	-	benign(0.001)	deleterious(0)	neutral(0.445)	NULL
C6orf222	389384	genome.wustl.edu	37	6	36298147	36298147	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010903.4	-1	validated	p.F107	0.016	65	0%	139	33.1%	0	-	-	-	-	NULL
ETV7	51513	genome.wustl.edu	37	6	36353391	36353391	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016135.2	-1	provisional	p.G21D	0.023	78	0%	86	38.4%	0	-	possibly_damaging(0.948)	tolerated(0.17)	neutral(0.450)	superfamily_SAM/Pointed domain
STK38	11329	genome.wustl.edu	37	6	36463592	36463592	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007271.2	-1	provisional	p.A456E	1.000	223	0%	368	35.1%	31	41.9%	benign(0.001)	tolerated(0.11)	neutral(0.272)	NULL
STK38	11329	genome.wustl.edu	37	6	36483183	36483183	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007271.2	-1	provisional	p.D201Y	1.000	279	0%	466	30.5%	15	46.6%	possibly_damaging(0.612)	deleterious(0)	deleterious(0.656)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SRSF3	6428	genome.wustl.edu	37	6	36564648	36564648	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003017.4	+1	validated	p.R37	1.000	95	0%	202	29.2%	236	45.7%	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
SRSF3	6428	genome.wustl.edu	37	6	36566682	36566682	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003017.4	+1	validated	p.R88I	1.000	144	0%	359	31.5%	294	44.5%	unknown(0)	deleterious(0)	-	superfamily_RNA-binding domain RBD
CPNE5	57699	genome.wustl.edu	37	6	36724058	36724058	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020939.1	-1	reviewed	p.K291N	1.000	214	0%	265	29.1%	2	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_C2_CaLB
FGD2	221472	genome.wustl.edu	37	6	36982772	36982772	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173558.3	+1	validated	p.I329	1.000	63	0%	93	30.1%	3	0%	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
TMEM217	221468	genome.wustl.edu	37	6	37186272	37186272	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145316.3	-1	validated	p.N179D	0.002	65	0%	95	41.1%	1	100%	benign(0.139)	tolerated(0.37)	neutral(0.031)	NULL
TMEM217	221468	genome.wustl.edu	37	6	37186304	37186304	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145316.3	-1	validated	p.R168Q	0.123	91	0%	134	35.1%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
FTSJD2	23070	genome.wustl.edu	37	6	37440242	37440242	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015050.2	+1	validated	p.S556	1.000	163	0%	237	62.9%	10	80%	-	-	-	NULL
MDGA1	266727	genome.wustl.edu	37	6	37622620	37622620	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153487.3	-1	validated	p.G223D	1.000	179	0%	311	35%	3	0%	possibly_damaging(0.608)	deleterious(0.03)	deleterious(0.575)	HMMSmart_SM00409,superfamily_Immunoglobulin
BTBD9	114781	genome.wustl.edu	37	6	38560565	38560565	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099272.1	-1	reviewed	p.D201Y	1.000	205	0.5%	272	27.6%	2	0%	possibly_damaging(0.867)	deleterious(0.05)	deleterious(0.682)	HMMPfam_BACK
DNAH8	1769	genome.wustl.edu	37	6	38781873	38781873	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001371.2	+1	validated	p.K884Q	1.000	180	0%	183	26.8%	0	-	benign(0.001)	tolerated(0.62)	neutral(0.004)	NULL
DNAH8	1769	genome.wustl.edu	37	6	38805788	38805788	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001371.2	+1	validated	p.V1262A	1.000	408	0%	557	31.2%	0	-	benign(0.212)	tolerated(0.33)	neutral(0.044)	NULL
DNAH8	1769	genome.wustl.edu	37	6	38813376	38813376	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001371.2	+1	validated	p.E1407D	0.998	132	0%	141	35.5%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_DHC_N2
DNAH8	1769	genome.wustl.edu	37	6	38818123	38818123	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001371.2	+1	validated	p.E1549*	1.000	274	0%	211	27.5%	0	-	-	-	-	HMMPfam_DHC_N2
DNAH8	1769	genome.wustl.edu	37	6	38835916	38835916	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001371.2	+1	validated	p.D2041Y	1.000	278	0%	418	32.8%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
DNAH8	1769	genome.wustl.edu	37	6	38840728	38840728	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001371.2	+1	validated	p.W2211*	1.000	137	0%	141	22.7%	0	-	-	-	-	HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH8	1769	genome.wustl.edu	37	6	38905928	38905928	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001371.2	+1	validated	p.E3697D	1.000	147	0%	199	29.1%	0	-	benign(0.31)	tolerated(0.06)	neutral(0.419)	NULL
DNAH8	1769	genome.wustl.edu	37	6	38950164	38950164	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001371.2	+1	validated	p.E4076K	1.000	387	0%	417	66.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Dynein_heavy
GLP1R	2740	genome.wustl.edu	37	6	39033594	39033594	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002062.3	+1	validated	p.R131*	0.850	127	0%	286	25.2%	0	-	-	-	-	HMMPfam_HRM,HMMSmart_SM00008,superfamily_Hormone receptor domain (HRM Pfam 02793),superfamily_Family A G protein-coupled receptor-like
GLP1R	2740	genome.wustl.edu	37	6	39047367	39047367	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002062.3	+1	validated	p.I357	1.000	170	0%	143	34.3%	0	-	-	-	-	HMMPfam_7tm_2,superfamily_Family A G protein-coupled receptor-like
KCNK5	8645	genome.wustl.edu	37	6	39162102	39162102	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003740.3	-1	reviewed	p.Q159H	1.000	78	0%	120	42.5%	0	-	probably_damaging(0.996)	deleterious(0.03)	deleterious(0.826)	superfamily_SSF81324
KCNK16	83795	genome.wustl.edu	37	6	39282860	39282860	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032115.3	-1	reviewed	p.P283L	0.000	146	0%	196	36.7%	0	-	unknown(0)	deleterious(0)	-	NULL
KCNK16	83795	genome.wustl.edu	37	6	39285666	39285666	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135105.1	-1	reviewed	p.L131	1.000	57	0%	50	32%	0	-	-	-	-	HMMPfam_Ion_trans_2,superfamily_SSF81324
KIF6	221458	genome.wustl.edu	37	6	39512325	39512325	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000373213	-1	known	p.L478I	1.000	391	0%	371	28.6%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
KIF6	221458	genome.wustl.edu	37	6	39554143	39554143	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145027.4	-1	validated	p.I295S	1.000	261	0%	403	35.2%	0	-	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
DAAM2	23500	genome.wustl.edu	37	6	39835492	39835492	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015345.2	+1	validated	p.N212S	1.000	43	0%	68	27.9%	5	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Drf_GBD
TREM2	54209	genome.wustl.edu	37	6	41126765	41126765	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018965.2	-1	reviewed	p.S174	0.011	141	0%	241	29.9%	28	0%	-	-	-	NULL
TFEB	7942	genome.wustl.edu	37	6	41652515	41652515	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007162.2	-1	validated	p.A418V	1.000	34	0%	33	21.2%	15	20%	benign(0.007)	tolerated(0.28)	neutral(0.032)	NULL
PRICKLE4	29964	genome.wustl.edu	37	6	41754815	41754815	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013397.5	+1	validated	p.S368N	0.001	88	0%	128	32.8%	9	44.4%	benign(0)	tolerated(0.65)	neutral(0.003)	NULL
CCND3	896	genome.wustl.edu	37	6	41908309	41908309	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000512426	-1	known	p.S6N	1.000	28	0%	74	41.9%	29	51.7%	-	-	-	HMMSmart_SM00385,HMMPfam_Cyclin_N,superfamily_Cyclin-like
C6orf132	647024	genome.wustl.edu	37	6	42071547	42071547	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000341865	-1	known	p.H1173	0.940	169	0%	386	28.5%	10	60%	-	-	-	NULL
GUCA1A	2978	genome.wustl.edu	37	6	42147046	42147046	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000409.3	+1	reviewed	p.T171A	0.997	47	0%	63	31.7%	0	-	possibly_damaging(0.93)	tolerated(0.05)	deleterious(0.722)	superfamily_EF-hand
TRERF1	55809	genome.wustl.edu	37	6	42236076	42236076	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033502.2	-1	reviewed	p.A418D	0.997	50	0%	74	29.7%	4	25%	probably_damaging(0.983)	deleterious(0.01)	deleterious(0.835)	NULL
UBR2	23304	genome.wustl.edu	37	6	42652536	42652536	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015255.2	+1	reviewed	p.P1594S	1.000	109	0%	187	29.9%	13	46.1%	possibly_damaging(0.827)	deleterious(0.01)	deleterious(0.720)	NULL
UBR2	23304	genome.wustl.edu	37	6	42652555	42652555	+	Nonsense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015255.2	+1	reviewed	p.L1600*	0.994	123	0%	226	35%	11	27.2%	-	-	-	NULL
PRPH2	5961	genome.wustl.edu	37	6	42689995	42689995	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000322.4	-1	reviewed	p.F26L	0.924	48	0%	112	34.8%	0	-	benign(0)	tolerated(1)	-	HMMPfam_Tetraspannin
KIAA0240	23506	genome.wustl.edu	37	6	42790682	42790682	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015349.1	+1	validated	p.D34Y	1.000	173	0%	286	26.6%	0	-	probably_damaging(0.996)	tolerated(0.09)	deleterious(0.758)	NULL
KIAA0240	23506	genome.wustl.edu	37	6	42832659	42832659	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015349.1	+1	validated	p.K905N	0.937	53	0%	102	41.2%	3	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
KIAA0240	23506	genome.wustl.edu	37	6	42832883	42832883	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015349.1	+1	validated	p.S980Y	1.000	60	0%	114	44.7%	3	0%	probably_damaging(0.958)	deleterious(0)	deleterious(0.846)	NULL
RPL7L1	285855	genome.wustl.edu	37	6	42854064	42854064	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198486.2	+1	provisional	p.E201D	0.198	184	0%	364	36.3%	51	39.2%	benign(0.103)	deleterious(0.03)	neutral(0.372)	superfamily_Ribosomal_L30
CUL7	9820	genome.wustl.edu	37	6	43018738	43018738	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014780.4	-1	reviewed	p.R401W	1.000	113	0%	175	34.9%	14	42.8%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
CUL7	9820	genome.wustl.edu	37	6	43020138	43020138	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014780.4	-1	reviewed	p.G130D	1.000	60	0%	84	40.5%	12	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MRPL2	51069	genome.wustl.edu	37	6	43023737	43023737	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015950.3	-1	reviewed	p.R177W	0.312	125	0%	247	31.6%	49	53%	probably_damaging(0.964)	deleterious(0)	deleterious(0.851)	HMMPfam_Ribosomal_L2_C
CRIP3	401262	genome.wustl.edu	37	6	43276122	43276122	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206922.2	-1	validated	p.K23N	1.000	51	0%	78	42.3%	0	-	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	HMMPfam_LIM,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,superfamily_SSF57716
POLR1C	9533	genome.wustl.edu	37	6	43487902	43487902	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203290.1	+1	validated	p.E161K	1.000	125	0%	233	33.9%	53	56.6%	benign(0.009)	tolerated(0.79)	neutral(0.002)	superfamily_RBP11-like subunits of RNA polymerase,HMMPfam_RNA_pol_L,HMMPfam_RNA_pol_A_bac,superfamily_Insert subdomain of RNA polymerase alpha subunit,HMMSmart_SM00662
XPO5	57510	genome.wustl.edu	37	6	43496593	43496593	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000455285	-1	known	p.S20L	0.997	142	0%	252	29%	23	56.5%	-	-	-	NULL
POLH	5429	genome.wustl.edu	37	6	43573049	43573049	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006502.2	+1	reviewed	p.R356Q	0.997	158	0%	273	31.9%	7	42.8%	benign(0.006)	deleterious(0.04)	neutral(0.349)	HMMPfam_IMS
POLH	5429	genome.wustl.edu	37	6	43581898	43581898	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006502.2	+1	reviewed	p.S582	0.000	62	0%	194	35.6%	9	11.1%	-	-	-	NULL
SLC29A1	2030	genome.wustl.edu	37	6	44197477	44197477	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001078174.1	+1	reviewed	p.A88V	1.000	152	0.7%	208	31.7%	9	11.1%	probably_damaging(0.975)	deleterious(0.01)	deleterious(0.823)	NULL
TCTE1	202500	genome.wustl.edu	37	6	44250242	44250242	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182539.3	-1	validated	p.R301*	0.089	137	0%	227	36.1%	0	-	-	-	-	superfamily_SSF52047
AARS2	57505	genome.wustl.edu	37	6	44268381	44268381	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020745.2	-1	validated	p.A954V	1.000	53	0%	69	30.4%	21	33.3%	possibly_damaging(0.952)	deleterious(0)	deleterious(0.840)	NULL
SPATS1	221409	genome.wustl.edu	37	6	44336178	44336178	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145026.3	+1	validated	p.E213*	1.000	198	0%	292	33.6%	0	-	-	-	-	NULL
CDC5L	988	genome.wustl.edu	37	6	44376268	44376268	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001253.2	+1	reviewed	p.N331D	1.000	107	0%	204	36.3%	16	50%	benign(0.234)	tolerated(0.23)	neutral(0.065)	NULL
SUPT3H	8464	genome.wustl.edu	37	6	44982541	44982541	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181356.1	-1	provisional	p.E132K	1.000	224	0%	253	23.3%	5	80%	benign(0.21)	tolerated(0.29)	neutral(0.050)	NULL
RUNX2	860	genome.wustl.edu	37	6	45399665	45399665	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024630.3	+1	reviewed	p.N231K	1.000	176	0%	219	31.5%	6	33.3%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	superfamily_P53_like_DNA_bnd,HMMPfam_Runt
ENPP4	22875	genome.wustl.edu	37	6	46107842	46107842	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014936.4	+1	validated	p.S174	0.000	121	0%	71	32.4%	5	60%	-	-	-	HMMPfam_Phosphodiest,superfamily_Alkaline_phosphatase_core
ENPP4	22875	genome.wustl.edu	37	6	46108891	46108891	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014936.4	+1	validated	p.R310Q	0.958	222	0%	95	27.4%	4	75%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Phosphodiest,superfamily_Alkaline_phosphatase_core
ENPP5	59084	genome.wustl.edu	37	6	46129392	46129392	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021572.4	-1	validated	p.N369Y	1.000	289	0%	379	33.5%	9	88.8%	benign(0.045)	tolerated(0.09)	neutral(0.299)	superfamily_Alkaline phosphatase-like
CYP39A1	51302	genome.wustl.edu	37	6	46607234	46607234	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016593.3	-1	reviewed	p.V162A	0.978	275	0%	296	32.4%	11	63.6%	possibly_damaging(0.46)	deleterious(0)	deleterious(0.596)	superfamily_Cytochrome P450
CYP39A1	51302	genome.wustl.edu	37	6	46609957	46609957	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016593.3	-1	reviewed	p.L86	0.996	183	0%	173	29.5%	11	9%	-	-	-	superfamily_Cytochrome P450
LOC100131283	100131283	genome.wustl.edu	37	6	46656591	46656591	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001718599.1	-1	model	p.E104*	1.000	22	0%	30	30%	0	-	probably_damaging(0.998)	tolerated(0.34)	deleterious(0.497)	NULL
TDRD6	221400	genome.wustl.edu	37	6	46657747	46657747	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010870.2	+1	validated	p.E628*	0.994	99	0%	181	29.8%	0	-	-	-	-	NULL
TDRD6	221400	genome.wustl.edu	37	6	46658116	46658116	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010870.2	+1	validated	p.L751F	0.014	44	0%	40	30%	0	-	possibly_damaging(0.862)	tolerated(0.7)	neutral(0.335)	NULL
TDRD6	221400	genome.wustl.edu	37	6	46658299	46658299	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010870.2	+1	validated	p.T812A	0.000	225	0%	238	34.5%	0	-	benign(0.001)	tolerated(0.67)	neutral(0.003)	HMMPfam_TUDOR
PLA2G7	7941	genome.wustl.edu	37	6	46672309	46672309	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005084.3	-1	reviewed	p.E438	0.002	189	0%	183	21.9%	9	33.3%	-	-	-	NULL
GPR116	221395	genome.wustl.edu	37	6	46847637	46847637	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098518.1	-1	validated	p.R318S	0.015	280	0%	294	28.9%	1	0%	benign(0.267)	tolerated(0.08)	neutral(0.328)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
GPR116	221395	genome.wustl.edu	37	6	46847742	46847742	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098518.1	-1	validated	p.I283	0.969	184	0%	235	36.6%	5	0%	-	-	-	HMMSmart_SM00409,superfamily_Immunoglobulin
TNFRSF21	27242	genome.wustl.edu	37	6	47202551	47202551	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014452.3	-1	reviewed	p.E531D	1.000	82	0%	100	38%	53	49%	benign(0.005)	tolerated(0.1)	neutral(0.286)	NULL
GPR115	221393	genome.wustl.edu	37	6	47680160	47680160	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153838.3	+1	validated	p.R123Q	0.016	154	0%	202	36.6%	0	-	benign(0.002)	tolerated(0.69)	neutral(0.002)	NULL
PTCHD4	442213	genome.wustl.edu	37	6	47976470	47976470	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000398738	-1	known	p.A269T	1.000	133	0%	184	33.2%	0	-	-	-	-	NULL
CRISP3	10321	genome.wustl.edu	37	6	49700911	49700911	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006061.1	-1	provisional	p.P173H	1.000	231	0%	194	21.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SCP,superfamily_SCP-like_extracellular,PatternScan_CRISP_2
TFAP2B	7021	genome.wustl.edu	37	6	50791358	50791358	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003221.3	+1	reviewed	p.G107E	0.996	142	0%	224	27.2%	0	-	probably_damaging(0.998)	tolerated(0.28)	deleterious(0.506)	NULL
TFAP2B	7021	genome.wustl.edu	37	6	50803903	50803903	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003221.3	+1	reviewed	p.S244L	1.000	107	0%	135	34.1%	1	100%	possibly_damaging(0.915)	deleterious(0.01)	deleterious(0.772)	HMMPfam_TF_AP-2
PKHD1	5314	genome.wustl.edu	37	6	51483974	51483974	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138694.3	-1	reviewed	p.L4044V	0.000	65	0%	50	28%	0	-	benign(0)	tolerated(1)	-	NULL
EFHC1	114327	genome.wustl.edu	37	6	52344582	52344582	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018100.3	+1	reviewed	p.E546A	0.043	97	0%	144	33.3%	28	39.2%	benign(0.002)	tolerated(0.58)	neutral(0.005)	superfamily_EF-hand
GSTA2	2939	genome.wustl.edu	37	6	52617688	52617688	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000846.4	-1	reviewed	p.E126D	0.318	466	0%	543	32.6%	1	0%	benign(0)	tolerated(1)	-	HMMPfam_GST_C,superfamily_GST_C_like
GSTA4	2941	genome.wustl.edu	37	6	52847411	52847411	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001512.3	-1	reviewed	p.E169D	1.000	149	0%	181	33.1%	13	7.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_GST_C,superfamily_Glutathione S-transferase (GST) C-terminal domain
GCLC	2729	genome.wustl.edu	37	6	53365257	53365257	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001498.2	-1	reviewed	p.F484V	1.000	220	0%	291	32%	20	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GCS,superfamily_Glutamine synthetase/guanido kinase
LRRC1	55227	genome.wustl.edu	37	6	53767437	53767437	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018214.4	+1	validated	p.K266N	1.000	155	0.6%	186	31.2%	13	53.8%	possibly_damaging(0.536)	deleterious(0.01)	deleterious(0.587)	HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like
TINAG	27283	genome.wustl.edu	37	6	54216195	54216195	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014464.3	+1	validated	p.A376S	1.000	239	0%	140	27.1%	0	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_Peptidase_C1,HMMSmart_SM00645,superfamily_Cysteine proteinases
TINAG	27283	genome.wustl.edu	37	6	54219385	54219385	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014464.3	+1	validated	p.E401*	0.032	201	0%	83	36.1%	0	-	-	-	-	HMMPfam_Peptidase_C1,HMMSmart_SM00645,superfamily_Cysteine proteinases
FAM83B	222584	genome.wustl.edu	37	6	54792313	54792313	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010872.1	+1	validated	p.R206Q	1.000	111	0%	117	40.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF1669,superfamily_SSF56024
FAM83B	222584	genome.wustl.edu	37	6	54805350	54805350	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010872.1	+1	validated	p.E527D	0.678	217	0%	191	27.7%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
FAM83B	222584	genome.wustl.edu	37	6	54805353	54805353	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010872.1	+1	validated	p.N528K	0.004	216	0%	188	35.6%	1	0%	benign(0.071)	tolerated(0.06)	neutral(0.328)	NULL
FAM83B	222584	genome.wustl.edu	37	6	54806084	54806084	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010872.1	+1	validated	p.S772Y	0.973	87	0%	75	28%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FAM83B	222584	genome.wustl.edu	37	6	54806432	54806432	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010872.1	+1	validated	p.R888I	1.000	109	0%	116	31%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FAM83B	222584	genome.wustl.edu	37	6	54806543	54806543	+	Missense_Mutation	SNP	G	G	A	rs181400966	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010872.1	+1	validated	p.R925Q	0.005	111	0.9%	109	41.3%	1	100%	possibly_damaging(0.704)	deleterious(0.01)	deleterious(0.659)	NULL
FAM83B	222584	genome.wustl.edu	37	6	54806759	54806759	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010872.1	+1	validated	p.R997Q	1.000	102	0%	79	34.2%	3	66.6%	probably_damaging(0.995)	tolerated(0.07)	deleterious(0.776)	NULL
HCRTR2	3062	genome.wustl.edu	37	6	55128616	55128616	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001526.3	+1	reviewed	p.R253Q	1.000	205	0%	212	33%	0	-	benign(0.004)	tolerated(0.4)	neutral(0.016)	HMMPfam_7tm_1,superfamily_SSF81321
GFRAL	389400	genome.wustl.edu	37	6	55196532	55196532	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207410.2	+1	validated	p.E14	0.046	161	0%	211	34.6%	0	-	-	-	-	NULL
HMGCLL1	54511	genome.wustl.edu	37	6	55360296	55360296	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019036.2	-1	validated	p.E269G	1.000	203	0%	208	37%	0	-	possibly_damaging(0.804)	tolerated(0.28)	neutral(0.334)	HMMPfam_HMGL-like,superfamily_Aldolase
DST	667	genome.wustl.edu	37	6	56341025	56341025	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015548.4	-1	reviewed	p.E4639D	0.998	183	0%	186	31.2%	10	30%	possibly_damaging(0.849)	-	-	HMMPfam_Spectrin,HMMSmart_SM00150
DST	667	genome.wustl.edu	37	6	56366442	56366442	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015548.4	-1	reviewed	p.N3916I	1.000	307	0%	217	34.6%	8	37.5%	possibly_damaging(0.809)	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DST	667	genome.wustl.edu	37	6	56394455	56394455	+	Missense_Mutation	SNP	C	C	T	rs186699708	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015548.4	-1	reviewed	p.D3173N	1.000	293	0%	313	34.8%	4	25%	probably_damaging(0.998)	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DST	667	genome.wustl.edu	37	6	56438629	56438629	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015548.4	-1	reviewed	p.K1739Q	1.000	257	0%	210	37.1%	1	100%	benign(0.307)	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DST	667	genome.wustl.edu	37	6	56443634	56443634	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015548.4	-1	reviewed	p.K1712N	0.994	158	0%	148	29.7%	0	-	possibly_damaging(0.559)	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DST	667	genome.wustl.edu	37	6	56469116	56469116	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000370769	-1	known	p.I3226S	0.000	112	0%	36	22.2%	0	-	possibly_damaging(0.819)	deleterious(0)	deleterious(0.754)	NULL
DST	667	genome.wustl.edu	37	6	56471701	56471701	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000370769	-1	known	p.T2364	0.000	184	0%	131	37.4%	1	0%	-	-	-	NULL
DST	667	genome.wustl.edu	37	6	56472647	56472647	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000370769	-1	known	p.F2049C	0.000	97	0%	84	34.5%	0	-	possibly_damaging(0.92)	deleterious(0)	deleterious(0.816)	NULL
DST	667	genome.wustl.edu	37	6	56472907	56472907	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000370769	-1	known	p.V1962	0.061	154	0%	89	27%	0	-	-	-	-	NULL
DST	667	genome.wustl.edu	37	6	56483018	56483018	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001723.5	-1	reviewed	p.Q1938	0.001	315	0.3%	309	32.7%	0	-	-	-	-	NULL
DST	667	genome.wustl.edu	37	6	56483750	56483750	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001723.5	-1	reviewed	p.E1694D	0.054	283	0%	217	30%	0	-	possibly_damaging(0.945)	deleterious(0.05)	deleterious(0.735)	NULL
DST	667	genome.wustl.edu	37	6	56492857	56492857	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015548.4	-1	reviewed	p.K989N	0.998	299	0%	344	30.5%	0	-	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	HMMSmart_SM00150,superfamily_Spectrin repeat
DST	667	genome.wustl.edu	37	6	56564503	56564503	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000370769	-1	known	p.G121E	1.000	233	0%	203	33.5%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	PatternScan_ACTININ_2,HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
DST	667	genome.wustl.edu	37	6	56716281	56716281	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000370754	-1	known	p.N180T	1.000	143	0%	171	42.1%	0	-	benign(0.002)	deleterious(0)	neutral(0.445)	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,superfamily_Calponin-homology domain CH-domain
ZNF451	26036	genome.wustl.edu	37	6	57006792	57006792	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031623.2	+1	validated	p.K301N	1.000	173	0%	168	29.8%	3	33.3%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
ZNF451	26036	genome.wustl.edu	37	6	57012307	57012307	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031623.2	+1	validated	p.E475A	1.000	66	0%	93	33.3%	1	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
BAG2	9532	genome.wustl.edu	37	6	57048856	57048856	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004282.3	+1	reviewed	p.K168N	1.000	96	0%	138	40.6%	11	27.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_BAG,HMMSmart_BAG
PRIM2	5558	genome.wustl.edu	37	6	57244724	57244724	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000425433	+1	known	p.R162Q	0.176	211	0%	225	17.8%	14	28.5%	-	-	-	NULL
PHF3	23469	genome.wustl.edu	37	6	64394052	64394052	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015153.2	+1	provisional	p.Q143	1.000	73	0%	89	39.3%	0	-	-	-	-	NULL
PHF3	23469	genome.wustl.edu	37	6	64395141	64395141	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015153.2	+1	provisional	p.P506	0.000	47	0%	64	31.2%	5	20%	-	-	-	NULL
PHF3	23469	genome.wustl.edu	37	6	64401724	64401724	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015153.2	+1	provisional	p.E763*	1.000	181	0%	320	34.7%	1	0%	-	-	-	HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,PatternScan_ZF_PHD_1,HMMPfam_PHD
PHF3	23469	genome.wustl.edu	37	6	64404571	64404571	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015153.2	+1	provisional	p.R866Q	1.000	63	0%	84	23.8%	2	50%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
PHF3	23469	genome.wustl.edu	37	6	64422066	64422066	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015153.2	+1	provisional	p.D1528Y	0.028	74	1.4%	54	22.2%	3	33.3%	possibly_damaging(0.805)	deleterious(0)	deleterious(0.748)	NULL
PHF3	23469	genome.wustl.edu	37	6	64422318	64422318	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015153.2	+1	provisional	p.N1612H	0.976	91	0%	81	30.9%	7	14.2%	benign(0.293)	deleterious(0)	deleterious(0.535)	NULL
EYS	346007	genome.wustl.edu	37	6	64791755	64791755	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142800.1	-1	reviewed	p.L2189F	0.972	160	0%	132	29.5%	0	-	probably_damaging(0.989)	-	-	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
EYS	346007	genome.wustl.edu	37	6	65300118	65300118	+	Missense_Mutation	SNP	G	G	T	rs150640306	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142800.1	-1	reviewed	p.S1881Y	0.984	161	0%	65	24.6%	0	-	possibly_damaging(0.819)	-	-	superfamily_Concanavalin A-like lectins/glucanases
EYS	346007	genome.wustl.edu	37	6	65301117	65301117	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142800.1	-1	reviewed	p.S1548Y	1.000	67	0%	40	32.5%	0	-	possibly_damaging(0.819)	-	-	superfamily_Concanavalin A-like lectins/glucanases
EYS	346007	genome.wustl.edu	37	6	65301784	65301784	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142800.1	-1	reviewed	p.E1326*	0.000	128	0%	101	32.7%	0	-	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
EYS	346007	genome.wustl.edu	37	6	65532544	65532544	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142800.1	-1	reviewed	p.R1055M	1.000	87	0%	47	29.8%	0	-	possibly_damaging(0.911)	-	-	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_EGF/Laminin
EYS	346007	genome.wustl.edu	37	6	66094302	66094302	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142800.1	-1	reviewed	p.F426L	1.000	222	0%	99	25.3%	0	-	benign(0.014)	tolerated(0.58)	neutral(0.005)	superfamily_EGF/Laminin
EYS	346007	genome.wustl.edu	37	6	66115178	66115178	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142800.1	-1	reviewed	p.A315	0.001	227	0%	155	32.9%	0	-	-	-	-	NULL
BAI3	577	genome.wustl.edu	37	6	69349237	69349237	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001704.2	+1	reviewed	p.E224*	1.000	18	0%	21	38.1%	0	-	-	-	-	NULL
BAI3	577	genome.wustl.edu	37	6	69703835	69703835	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001704.2	+1	reviewed	p.P637H	1.000	163	0%	140	30.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
BAI3	577	genome.wustl.edu	37	6	69759194	69759194	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001704.2	+1	reviewed	p.G763	1.000	219	0.5%	178	25.8%	0	-	-	-	-	NULL
BAI3	577	genome.wustl.edu	37	6	70071397	70071397	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001704.2	+1	reviewed	p.S1411Y	1.000	128	0%	82	30.5%	0	-	possibly_damaging(0.911)	deleterious(0)	deleterious(0.807)	NULL
BAI3	577	genome.wustl.edu	37	6	70092781	70092781	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001704.2	+1	reviewed	p.F1445C	1.000	214	0%	138	36.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
LMBRD1	55788	genome.wustl.edu	37	6	70423563	70423563	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018368.3	-1	reviewed	p.F297I	1.000	376	0%	276	37%	12	0%	benign(0.013)	tolerated(0.92)	neutral(0.001)	HMMPfam_LMBR1
COL19A1	1310	genome.wustl.edu	37	6	70608900	70608900	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001858.4	+1	reviewed	p.K51T	0.002	173	0%	204	36.3%	0	-	unknown(0)	tolerated(0.09)	-	HMMSmart_TSPN
COL19A1	1310	genome.wustl.edu	37	6	70646711	70646711	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001858.4	+1	reviewed	p.S261*	0.005	218	0%	154	35.1%	0	-	-	-	-	NULL
COL19A1	1310	genome.wustl.edu	37	6	70866024	70866024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001858.4	+1	reviewed	p.F695L	1.000	169	0%	99	31.3%	0	-	benign(0.056)	tolerated(0.64)	neutral(0.007)	NULL
COL9A1	1297	genome.wustl.edu	37	6	71004188	71004188	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001851.4	-1	reviewed	p.K126N	1.000	118	0%	127	35.4%	0	-	probably_damaging(0.96)	tolerated(0.24)	neutral(0.441)	HMMSmart_TSPN,superfamily_ConA_like_lec_gl
FAM135A	57579	genome.wustl.edu	37	6	71234495	71234495	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000418814	+1	known	p.Q570K	1.000	70	0%	76	17.1%	1	0%	benign(0.054)	deleterious(0.01)	neutral(0.409)	NULL
FAM135A	57579	genome.wustl.edu	37	6	71235323	71235323	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105531.2	+1	validated	p.D650N	1.000	108	0%	102	32.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FAM135A	57579	genome.wustl.edu	37	6	71245997	71245997	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105531.2	+1	validated	p.R1138C	1.000	320	0%	324	31.8%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF676,superfamily_SSF53474
RIMS1	22999	genome.wustl.edu	37	6	72892167	72892167	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014989.4	+1	reviewed	p.P331	0.012	40	0%	76	38.2%	0	-	-	-	-	NULL
RIMS1	22999	genome.wustl.edu	37	6	72960769	72960769	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014989.4	+1	reviewed	p.E840*	1.000	236	0%	235	30.2%	0	-	-	-	-	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
RIMS1	22999	genome.wustl.edu	37	6	73108671	73108671	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014989.4	+1	reviewed	p.V1579L	1.000	201	0%	189	29.1%	0	-	possibly_damaging(0.839)	tolerated(0.12)	deleterious(0.581)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),PatternScan_GLYCOSYL_HYDROL_F1_1
KCNQ5	56479	genome.wustl.edu	37	6	73879567	73879567	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019842.3	+1	reviewed	p.R523*	0.987	164	0%	218	28%	0	-	-	-	-	HMMPfam_KCNQ_channel
KHDC1L	100129128	genome.wustl.edu	37	6	73933492	73933492	+	Silent	SNP	C	C	T	rs146490159	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001126063.2	-1	validated	p.L122	0.002	126	0%	247	33.6%	0	-	-	-	-	NULL
DPPA5	340168	genome.wustl.edu	37	6	74063897	74063897	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025290.1	-1	provisional	p.E18K	0.005	81	0%	105	34.3%	0	-	benign(0)	deleterious(0.02)	neutral(0.383)	superfamily_SSF54791
OOEP	441161	genome.wustl.edu	37	6	74079353	74079353	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080507.2	-1	validated	p.E55*	0.089	40	0%	97	33%	0	-	-	-	-	NULL
DDX43	55510	genome.wustl.edu	37	6	74117772	74117772	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018665.2	+1	reviewed	p.L376S	0.984	145	0%	289	31.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540
MB21D1	115004	genome.wustl.edu	37	6	74150030	74150030	+	Missense_Mutation	SNP	C	C	T	rs190867294	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138441.2	-1	validated	p.R339H	0.006	204	0%	332	33.1%	1	0%	possibly_damaging(0.598)	deleterious(0.05)	deleterious(0.552)	NULL
MB21D1	115004	genome.wustl.edu	37	6	74155353	74155353	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138441.2	-1	validated	p.E259*	0.975	121	0%	130	33.1%	0	-	-	-	-	NULL
SLC17A5	26503	genome.wustl.edu	37	6	74346406	74346406	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012434.4	-1	reviewed	p.S213Y	1.000	62	0%	112	28.6%	9	88.8%	probably_damaging(0.961)	deleterious(0)	deleterious(0.849)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
CD109	135228	genome.wustl.edu	37	6	74440163	74440163	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133493.3	+1	reviewed	p.E125*	1.000	165	0%	255	31%	0	-	-	-	-	HMMPfam_A2M_N
CD109	135228	genome.wustl.edu	37	6	74481193	74481193	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133493.3	+1	reviewed	p.E572D	0.997	162	0%	221	33.5%	0	-	benign(0.024)	tolerated(1)	neutral(0.001)	HMMPfam_A2M_N_2
CD109	135228	genome.wustl.edu	37	6	74481299	74481299	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133493.3	+1	reviewed	p.E608*	1.000	88	1.1%	120	28.3%	0	-	-	-	-	NULL
CD109	135228	genome.wustl.edu	37	6	74516669	74516669	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133493.3	+1	reviewed	p.Q1021H	0.999	200	0%	247	32%	3	33.3%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_comp
FILIP1	27145	genome.wustl.edu	37	6	76023721	76023721	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015687.2	-1	validated	p.E609D	0.784	432	0%	563	13.7%	1	0%	benign(0.035)	tolerated(0.4)	neutral(0.018)	NULL
FILIP1	27145	genome.wustl.edu	37	6	76124490	76124490	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015687.2	-1	validated	p.R67*	0.005	252	0%	242	31.8%	0	-	-	-	-	HMMPfam_CortBP2
SENP6	26054	genome.wustl.edu	37	6	76343307	76343307	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015571.2	+1	validated	p.R73Q	0.993	111	0%	119	29.4%	3	0%	benign(0.003)	tolerated(0.13)	neutral(0.253)	NULL
MYO6	4646	genome.wustl.edu	37	6	76591412	76591412	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004999.3	+1	reviewed	p.E765*	1.000	122	0%	163	28.8%	19	0%	-	-	-	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
IMPG1	3617	genome.wustl.edu	37	6	76660415	76660415	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001563.2	-1	provisional	p.S563Y	0.993	63	0%	95	44.2%	0	-	probably_damaging(0.968)	tolerated(0.14)	deleterious(0.659)	superfamily_SSF82671
IMPG1	3617	genome.wustl.edu	37	6	76660805	76660805	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001563.2	-1	provisional	p.S433Y	0.119	150	0.7%	169	32%	0	-	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
HTR1B	3351	genome.wustl.edu	37	6	78172193	78172193	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000863.1	-1	provisional	p.R310C	1.000	105	0%	134	33.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
IRAK1BP1	134728	genome.wustl.edu	37	6	79608035	79608035	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010844.1	+1	provisional	p.R256I	0.993	25	0%	45	48.9%	3	0%	benign(0.021)	tolerated(0.07)	neutral(0.320)	NULL
PHIP	55023	genome.wustl.edu	37	6	79655966	79655966	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017934.5	-1	validated	p.K1461T	1.000	303	0%	385	36.4%	4	50%	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	NULL
PHIP	55023	genome.wustl.edu	37	6	79668221	79668221	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017934.5	-1	validated	p.F1251	1.000	104	0%	81	24.7%	0	-	-	-	-	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain
PHIP	55023	genome.wustl.edu	37	6	79707306	79707306	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017934.5	-1	validated	p.S676R	0.999	235	0%	239	33.5%	6	33.3%	possibly_damaging(0.923)	tolerated(0.64)	neutral(0.376)	NULL
PHIP	55023	genome.wustl.edu	37	6	79708099	79708099	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017934.5	-1	validated	p.Q630P	1.000	186	0%	175	36.6%	8	62.5%	possibly_damaging(0.85)	tolerated(0.09)	deleterious(0.623)	NULL
PHIP	55023	genome.wustl.edu	37	6	79727227	79727227	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017934.5	-1	validated	p.E356D	1.000	54	0%	50	34%	2	50%	possibly_damaging(0.892)	tolerated(0.08)	deleterious(0.651)	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,HMMPfam_WD40
LCA5	167691	genome.wustl.edu	37	6	80222939	80222939	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122769.2	-1	reviewed	p.R237I	1.000	214	0%	175	30.9%	1	0%	probably_damaging(0.996)	tolerated(0.11)	deleterious(0.733)	NULL
LCA5	167691	genome.wustl.edu	37	6	80223051	80223051	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122769.2	-1	reviewed	p.K200Q	1.000	434	0%	341	34%	1	100%	probably_damaging(0.995)	tolerated(0.08)	deleterious(0.758)	NULL
ELOVL4	6785	genome.wustl.edu	37	6	80626527	80626527	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022726.3	-1	reviewed	p.H248R	1.000	193	0%	220	29.5%	2	0%	possibly_damaging(0.757)	tolerated(0.37)	neutral(0.299)	HMMPfam_ELO
UBE3D	90025	genome.wustl.edu	37	6	83754345	83754345	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198920.1	-1	provisional	p.E133D	0.986	166	0%	164	33.5%	3	0%	benign(0.091)	tolerated(0.38)	neutral(0.024)	HMMPfam_DUF2351
DOPEY1	23033	genome.wustl.edu	37	6	83829562	83829562	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015018.2	+1	validated	p.E326*	1.000	180	0%	186	35.5%	0	-	-	-	-	NULL
DOPEY1	23033	genome.wustl.edu	37	6	83832636	83832636	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015018.2	+1	validated	p.L425	0.253	340	0%	229	23.6%	0	-	-	-	-	NULL
DOPEY1	23033	genome.wustl.edu	37	6	83839089	83839089	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015018.2	+1	validated	p.S735R	0.014	122	0%	116	39.7%	0	-	benign(0.009)	tolerated(0.68)	neutral(0.003)	NULL
PGM3	5238	genome.wustl.edu	37	6	83900642	83900642	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015599.1	-1	provisional	p.T30	0.004	292	0%	379	31.9%	14	21.4%	-	-	-	NULL
ME1	4199	genome.wustl.edu	37	6	84055897	84055897	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002395.4	-1	reviewed	p.N199H	1.000	98	0%	164	40.2%	0	-	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_malic,superfamily_SSF53223
SNAP91	9892	genome.wustl.edu	37	6	84371287	84371287	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014841.2	-1	validated	p.R129I	1.000	133	0%	104	27.9%	0	-	benign(0.276)	deleterious(0.04)	neutral(0.378)	superfamily_ENTH/VHS domain,HMMPfam_ANTH,HMMSmart_SM00273
KIAA1009	22832	genome.wustl.edu	37	6	84896325	84896325	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014895.2	-1	validated	p.E376K	0.005	152	0%	177	32.8%	1	0%	benign(0.086)	tolerated(0.21)	neutral(0.050)	NULL
NT5E	4907	genome.wustl.edu	37	6	86181001	86181001	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002526.2	+1	validated	p.E203D	1.000	127	0%	150	38%	2	0%	possibly_damaging(0.944)	tolerated(0.14)	deleterious(0.638)	HMMPfam_Metallophos,superfamily_SSF56300
SNX14	57231	genome.wustl.edu	37	6	86253463	86253463	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153816.3	-1	reviewed	p.R375I	1.000	55	0%	78	37.2%	9	22.2%	possibly_damaging(0.691)	deleterious(0.01)	deleterious(0.653)	HMMPfam_RGS,HMMSmart_SM00315,superfamily_Regulator of G-protein signaling RGS
SYNCRIP	10492	genome.wustl.edu	37	6	86328993	86328993	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006372.4	-1	validated	p.A384D	1.000	180	0%	280	30%	80	15%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
SYNCRIP	10492	genome.wustl.edu	37	6	86350232	86350232	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006372.4	-1	validated	p.E67*	1.000	132	0%	156	34.6%	36	30.5%	-	-	-	NULL
LOC100289653	100289653	genome.wustl.edu	37	6	87607384	87607384	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342648.1	+1	model	p.Y183	1.000	135	0%	220	35.9%	0	-	-	-	-	superfamily_PH domain-like
ZNF292	23036	genome.wustl.edu	37	6	87943081	87943081	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015021.1	+1	validated	p.D193N	1.000	116	0%	173	34.1%	1	0%	benign(0.188)	tolerated(0.16)	neutral(0.077)	NULL
ZNF292	23036	genome.wustl.edu	37	6	87967461	87967461	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015021.1	+1	validated	p.D1372Y	1.000	105	0%	92	20.7%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_C2H2 and C2HC zinc fingers
GJB7	375519	genome.wustl.edu	37	6	87994149	87994149	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198568.2	-1	validated	p.P161H	1.000	135	0%	172	33.7%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_CONNEXINS_2,HMMPfam_Connexin_CCC
C6orf163	206412	genome.wustl.edu	37	6	88074836	88074836	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001720635.1	+1	model	p.E112K	0.816	125	0%	163	32.5%	1	0%	probably_damaging(1)	tolerated(0.11)	deleterious(0.772)	NULL
C6orf163	206412	genome.wustl.edu	37	6	88075017	88075017	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001720635.1	+1	model	p.P172H	0.993	68	0%	80	30%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SLC35A1	10559	genome.wustl.edu	37	6	88218163	88218163	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000369557	+1	known	p.E158*	1.000	142	0.7%	131	35.9%	8	25%	-	-	-	NULL
RARS2	57038	genome.wustl.edu	37	6	88273851	88273851	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020320.3	-1	reviewed	p.E70D	1.000	214	0%	374	34.5%	20	30%	possibly_damaging(0.907)	tolerated(0.13)	deleterious(0.613)	superfamily_Arginyl-tRNA synthetase (ArgRS) N-terminal 'additional' domain
ORC3	23595	genome.wustl.edu	37	6	88311549	88311549	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181837.1	+1	reviewed	p.R43*	1.000	127	0%	206	38.3%	4	25%	-	-	-	HMMPfam_ORC3_N
SPACA1	81833	genome.wustl.edu	37	6	88767344	88767344	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030960.2	+1	reviewed	p.E94*	1.000	259	0%	300	30.7%	0	-	-	-	-	NULL
CNR1	1268	genome.wustl.edu	37	6	88854630	88854630	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016083.4	-1	reviewed	p.L122M	0.880	59	0%	104	26.9%	0	-	possibly_damaging(0.924)	deleterious(0.01)	deleterious(0.778)	superfamily_Family A G protein-coupled receptor-like
RNGTT	8732	genome.wustl.edu	37	6	89600276	89600276	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003800.3	-1	validated	p.K278	1.000	205	0%	279	29%	0	-	-	-	-	HMMPfam_mRNA_cap_enzyme,superfamily_DNA ligase/mRNA capping enzyme catalytic domain
UBE2J1	51465	genome.wustl.edu	37	6	90039597	90039597	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016021.2	-1	reviewed	p.R253Q	0.999	222	0%	295	28.8%	104	27.8%	possibly_damaging(0.79)	tolerated(0.27)	neutral(0.330)	NULL
ANKRD6	22881	genome.wustl.edu	37	6	90276737	90276737	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014942.3	+1	validated	p.L14	1.000	118	0%	175	21.7%	4	75%	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
MDN1	23195	genome.wustl.edu	37	6	90448158	90448158	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014611.1	-1	provisional	p.R1537I	1.000	131	0%	175	38.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases
MDN1	23195	genome.wustl.edu	37	6	90452878	90452878	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014611.1	-1	provisional	p.R1480I	1.000	111	0%	207	28.5%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases
GJA10	84694	genome.wustl.edu	37	6	90605433	90605433	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032602.1	+1	validated	p.S416G	0.936	93	0%	166	30.7%	0	-	possibly_damaging(0.907)	deleterious(0.01)	deleterious(0.766)	NULL
BACH2	60468	genome.wustl.edu	37	6	90661285	90661285	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021813.2	-1	validated	p.C180	1.000	230	0%	227	33%	0	-	-	-	-	NULL
EPHA7	2045	genome.wustl.edu	37	6	93956553	93956553	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004440.3	-1	reviewed	p.R895*	1.000	331	0%	349	30.9%	10	30%	-	-	-	superfamily_Protein kinase-like (PK-like)
MANEA	79694	genome.wustl.edu	37	6	96034467	96034467	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024641.2	+1	validated	p.R51Q	0.000	221	0%	210	30.5%	1	0%	benign(0.122)	tolerated(0.44)	neutral(0.022)	NULL
FUT9	10690	genome.wustl.edu	37	6	96651056	96651056	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006581.3	+1	validated	p.L9I	1.000	78	0%	108	37%	0	-	benign(0)	tolerated(0.23)	neutral(0.042)	HMMPfam_Glyco_transf_10
FUT9	10690	genome.wustl.edu	37	6	96651230	96651230	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006581.3	+1	validated	p.L67M	0.997	220	0%	259	32.4%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Glyco_transf_10
UFL1	23376	genome.wustl.edu	37	6	96996080	96996080	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015323.4	+1	validated	p.E481D	0.994	210	0%	81	35.8%	7	42.8%	benign(0.377)	tolerated(0.43)	neutral(0.134)	NULL
UFL1	23376	genome.wustl.edu	37	6	97000528	97000528	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015323.4	+1	validated	p.K719T	1.000	141	0%	90	28.9%	10	40%	possibly_damaging(0.701)	tolerated(0.28)	neutral(0.283)	NULL
FHL5	9457	genome.wustl.edu	37	6	97051624	97051624	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020482.4	+1	reviewed	p.K45N	0.859	152	0%	172	29.1%	0	-	possibly_damaging(0.592)	tolerated(0.34)	neutral(0.227)	HMMPfam_LIM,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,superfamily_SSF57716
FBXL4	26235	genome.wustl.edu	37	6	99374572	99374572	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012160.3	-1	reviewed	p.R98Q	1.000	118	0%	198	31.8%	3	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
FAXC	84553	genome.wustl.edu	37	6	99729199	99729199	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032511.2	-1	validated	p.P357	0.019	278	0%	242	39.3%	14	57.1%	-	-	-	NULL
PNISR	25957	genome.wustl.edu	37	6	99848627	99848627	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015491.1	-1	validated	p.S736Y	1.000	351	0%	361	21.6%	40	22.5%	possibly_damaging(0.449)	deleterious(0)	deleterious(0.592)	NULL
USP45	85015	genome.wustl.edu	37	6	99891451	99891451	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080481.1	-1	provisional	p.R688I	1.000	65	0%	96	27.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_UCH,superfamily_Cysteine proteinases
USP45	85015	genome.wustl.edu	37	6	99893833	99893833	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080481.1	-1	provisional	p.Q605	1.000	56	0%	68	30.9%	2	100%	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
USP45	85015	genome.wustl.edu	37	6	99912964	99912964	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080481.1	-1	provisional	p.E386*	1.000	117	0%	130	44.6%	0	-	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
USP45	85015	genome.wustl.edu	37	6	99936646	99936646	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080481.1	-1	provisional	p.E177*	0.949	150	0%	214	32.2%	1	100%	-	-	-	NULL
PRDM13	59336	genome.wustl.edu	37	6	100056621	100056621	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021620.3	+1	validated	p.R50H	1.000	41	0%	33	42.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SET
PRDM13	59336	genome.wustl.edu	37	6	100062044	100062044	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021620.3	+1	validated	p.E511D	1.000	6	0.000	10	0.400	0	-	possibly_damaging(0.945)	tolerated(0.3)	neutral(0.418)	NULL
SIM1	6492	genome.wustl.edu	37	6	100841487	100841487	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005068.2	-1	reviewed	p.P482	0.948	88	0%	96	41.7%	0	-	-	-	-	HMMPfam_SIM_C
ASCC3	10973	genome.wustl.edu	37	6	100960782	100960782	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006828.2	-1	validated	p.L2030V	1.000	116	0%	153	30.1%	22	54.5%	benign(0.007)	tolerated(0.55)	neutral(0.007)	HMMSmart_SEC63
ASCC3	10973	genome.wustl.edu	37	6	101054908	101054908	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006828.2	-1	validated	p.F1614	0.997	208	0%	195	32.3%	8	50%	-	-	-	HMMPfam_Helicase_C,HMMSmart_HELICc,superfamily_SSF52540
ASCC3	10973	genome.wustl.edu	37	6	101296418	101296418	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006828.2	-1	validated	p.R136Q	0.997	102	0%	96	38.5%	1	100%	benign(0.07)	tolerated(0.65)	neutral(0.008)	NULL
GRIK2	2898	genome.wustl.edu	37	6	101847239	101847239	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021956.4	+1	reviewed	p.S29Y	1.000	244	0%	321	40.8%	0	-	benign(0.198)	deleterious(0.03)	neutral(0.384)	superfamily_Periplasmic binding protein-like I
GRIK2	2898	genome.wustl.edu	37	6	102124662	102124662	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021956.4	+1	reviewed	p.A236T	1.000	140	0%	204	29.9%	1	0%	possibly_damaging(0.922)	tolerated(0.5)	neutral(0.382)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRIK2	2898	genome.wustl.edu	37	6	102247617	102247617	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021956.4	+1	reviewed	p.R349Q	1.000	323	0%	288	29.2%	1	0%	probably_damaging(0.984)	tolerated(0.57)	neutral(0.436)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRIK2	2898	genome.wustl.edu	37	6	102307217	102307217	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021956.4	+1	reviewed	p.R458Q	1.000	330	0%	361	31.3%	0	-	probably_damaging(0.992)	tolerated(0.14)	deleterious(0.697)	HMMSmart_SM00079,HMMPfam_Lig_chan-Glu_bd,superfamily_Periplasmic binding protein-like II
BVES	11149	genome.wustl.edu	37	6	105564575	105564575	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007073.3	-1	reviewed	e5+1	1.000	155	0%	196	24.5%	0	-	-	-	-	-
POPDC3	64208	genome.wustl.edu	37	6	105606457	105606457	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022361.4	-1	reviewed	p.R255I	0.694	207	0%	265	29.1%	0	-	benign(0.347)	deleterious(0.01)	deleterious(0.516)	HMMPfam_Popeye
PREP	5550	genome.wustl.edu	37	6	105781363	105781363	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002726.3	-1	reviewed	p.K281Q	1.000	156	0%	261	33.3%	14	57.1%	probably_damaging(0.995)	tolerated(0.08)	deleterious(0.758)	HMMPfam_Peptidase_S9_N,superfamily_Peptidase_S9A_N
AIM1	202	genome.wustl.edu	37	6	106999787	106999787	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001624.2	+1	validated	p.F1383L	0.300	50	0%	102	40.2%	3	33.3%	benign(0)	tolerated(0.75)	neutral(0.002)	HMMPfam_Crystall,HMMSmart_XTALbg,superfamily_G_crystallin_SF
BEND3	57673	genome.wustl.edu	37	6	107390787	107390787	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080450.2	-1	validated	p.F536	0.988	19	0%	16	31.2%	1	0%	-	-	-	NULL
PDSS2	57107	genome.wustl.edu	37	6	107531678	107531678	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020381.3	-1	reviewed	p.L325I	1.000	129	0%	179	33%	3	33.3%	benign(0.01)	tolerated(0.41)	neutral(0.015)	superfamily_Terpenoid synthases
PDSS2	57107	genome.wustl.edu	37	6	107655469	107655469	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020381.3	-1	reviewed	p.A122S	1.000	90	0%	86	30.2%	5	60%	unknown(0)	deleterious(0)	-	superfamily_Terpenoid synthases
SCML4	256380	genome.wustl.edu	37	6	108066344	108066344	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198081.3	-1	validated	p.S164L	0.995	44	0%	34	23.5%	0	-	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
SCML4	256380	genome.wustl.edu	37	6	108093501	108093501	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198081.3	-1	validated	p.R11*	1.000	195	0%	222	31.1%	0	-	-	-	-	NULL
SEC63	11231	genome.wustl.edu	37	6	108197787	108197787	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007214.4	-1	reviewed	p.T672M	1.000	313	0%	374	32.1%	113	43.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Sec63,HMMSmart_SEC63
SEC63	11231	genome.wustl.edu	37	6	108214797	108214797	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007214.4	-1	reviewed	p.K521N	1.000	310	0%	345	35.1%	40	45%	possibly_damaging(0.95)	tolerated(0.22)	neutral(0.435)	HMMPfam_Sec63,HMMSmart_SEC63
NR2E1	7101	genome.wustl.edu	37	6	108501566	108501566	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003269.3	+1	validated	p.L228I	1.000	162	0%	256	37.5%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain
ARMC2	84071	genome.wustl.edu	37	6	109232170	109232170	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032131.4	+1	validated	p.K364N	1.000	129	0%	172	23.8%	0	-	benign(0.09)	tolerated(0.65)	neutral(0.009)	superfamily_ARM-type_fold
PPIL6	285755	genome.wustl.edu	37	6	109748083	109748083	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173672.4	-1	validated	p.R200*	1.000	220	0%	324	30.6%	14	21.4%	-	-	-	HMMPfam_Pro_isomerase,superfamily_Cyclophilin-like
MICAL1	64780	genome.wustl.edu	37	6	109770560	109770560	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000368957	-1	known	p.L5	0.000	136	0%	190	36.3%	0	-	-	-	-	NULL
ZBTB24	9841	genome.wustl.edu	37	6	109787507	109787507	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014797.2	-1	validated	p.S547	0.001	164	0.6%	247	31.2%	5	20%	-	-	-	NULL
ZBTB24	9841	genome.wustl.edu	37	6	109802885	109802885	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014797.2	-1	validated	p.F115L	0.980	246	0%	397	38%	2	50%	benign(0.001)	tolerated(0.17)	neutral(0.059)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
AKD1	221264	genome.wustl.edu	37	6	109814704	109814704	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000424296	-1	known	p.S947R	0.998	230	0%	330	34.2%	2	50%	benign(0)	tolerated(0.57)	neutral(0.006)	NULL
FIG4	9896	genome.wustl.edu	37	6	110037744	110037744	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014845.5	+1	reviewed	p.R88*	1.000	216	0%	392	34.7%	8	50%	-	-	-	NULL
CDC40	51362	genome.wustl.edu	37	6	110522830	110522830	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015891.2	+1	reviewed	p.E116K	1.000	265	0%	317	32.8%	3	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
METTL24	728464	genome.wustl.edu	37	6	110567212	110567212	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001123364.1	-1	inferred	p.K346N	1.000	258	0%	320	28.7%	0	-	benign(0.159)	deleterious(0.03)	neutral(0.379)	NULL
LOC441166	441166	genome.wustl.edu	37	6	111179897	111179897	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_016728.3	+1	model	NULL	0.951	16	0%	21	52.4%	0	-	-	-	-	-
AMD1	262	genome.wustl.edu	37	6	111211528	111211528	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001634.4	+1	reviewed	p.E132D	1.000	72	0%	78	37.2%	36	41.6%	benign(0.009)	tolerated(0.77)	neutral(0.002)	HMMPfam_SAM_decarbox,superfamily_S-AdenosylMet_decarbase_core
RPF2	84154	genome.wustl.edu	37	6	111318400	111318400	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032194.1	+1	validated	p.K83N	1.000	212	0%	359	30.1%	18	27.7%	possibly_damaging(0.92)	tolerated(0.28)	neutral(0.402)	HMMPfam_Brix
REV3L	5980	genome.wustl.edu	37	6	111621310	111621310	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002912.3	-1	validated	p.S3101Y	1.000	239	0%	318	28.6%	53	33.9%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
REV3L	5980	genome.wustl.edu	37	6	111636554	111636554	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002912.3	-1	validated	p.K2794N	1.000	139	0%	240	30%	29	51.7%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_DNA_pol_B,superfamily_DNA/RNA polymerases
REV3L	5980	genome.wustl.edu	37	6	111696343	111696343	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002912.3	-1	validated	p.R1072I	1.000	305	0%	315	33.7%	2	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_Ribonuclease H-like
REV3L	5980	genome.wustl.edu	37	6	111699009	111699009	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002912.3	-1	validated	p.D498Y	1.000	226	0%	247	35.2%	2	0%	benign(0.027)	deleterious(0)	neutral(0.446)	superfamily_Ribonuclease H-like
REV3L	5980	genome.wustl.edu	37	6	111726690	111726690	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002912.3	-1	validated	p.R183Q	1.000	173	0%	180	28.9%	3	33.3%	probably_damaging(0.999)	-	-	superfamily_Ribonuclease H-like
FYN	2534	genome.wustl.edu	37	6	112015662	112015662	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002037.3	-1	reviewed	p.L397I	0.931	231	0.4%	273	27.8%	69	39.1%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR,superfamily_Protein kinase-like (PK-like)
WISP3	8838	genome.wustl.edu	37	6	112382254	112382254	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198239.1	+1	reviewed	p.E55*	0.007	130	0%	184	31%	0	-	-	-	-	NULL
LAMA4	3910	genome.wustl.edu	37	6	112443227	112443227	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105206.1	-1	reviewed	p.F1489V	1.000	484	0.2%	456	36.2%	13	0%	probably_damaging(0.998)	tolerated(0.17)	deleterious(0.533)	superfamily_Concanavalin A-like lectins/glucanases
LAMA4	3910	genome.wustl.edu	37	6	112453970	112453970	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105206.1	-1	reviewed	p.F1273L	1.000	210	0%	174	30.5%	10	0%	benign(0.003)	tolerated(0.53)	neutral(0.007)	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
LAMA4	3910	genome.wustl.edu	37	6	112460448	112460448	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105206.1	-1	reviewed	p.F1052	0.999	203	0%	188	33%	5	0%	-	-	-	superfamily_Concanavalin A-like lectins/glucanases
LAMA4	3910	genome.wustl.edu	37	6	112537653	112537653	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105206.1	-1	reviewed	p.F71L	1.000	83	0%	151	39.1%	6	0%	possibly_damaging(0.574)	deleterious(0.03)	deleterious(0.561)	NULL
LOC100128588	100128588	genome.wustl.edu	37	6	112647615	112647615	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001723020.1	-1	model	p.L113I	0.173	17	0%	15	33.3%	0	-	-	-	-	NULL
HS3ST5	222537	genome.wustl.edu	37	6	114378586	114378586	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153612.3	-1	validated	p.F292L	1.000	151	0%	206	34%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
FRK	2444	genome.wustl.edu	37	6	116264232	116264232	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002031.2	-1	reviewed	p.F419	1.000	163	0.6%	122	27%	1	0%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
FRK	2444	genome.wustl.edu	37	6	116325138	116325138	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002031.2	-1	reviewed	p.R123I	1.000	179	0%	150	37.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_SH2,HMMSmart_SH2,superfamily_SH3,superfamily_SSF55550
COL10A1	1300	genome.wustl.edu	37	6	116446591	116446591	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000493.3	-1	reviewed	p.A22D	1.000	422	0%	456	37.5%	4	0%	unknown(0)	tolerated(0.05)	-	NULL
TSPYL4	23270	genome.wustl.edu	37	6	116573928	116573928	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021648.4	-1	validated	p.*415	0.940	101	0%	109	33%	14	57.1%	-	-	-	NULL
TSPYL4	23270	genome.wustl.edu	37	6	116575057	116575057	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021648.4	-1	validated	p.E39*	0.019	80	0%	98	38.8%	6	33.3%	-	-	-	NULL
RWDD1	51389	genome.wustl.edu	37	6	116914255	116914255	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015952.2	+1	validated	p.S241	0.118	110	0%	142	34.5%	211	47.8%	-	-	-	NULL
RSPH4A	345895	genome.wustl.edu	37	6	116949323	116949323	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010892.2	+1	reviewed	p.R485*	1.000	98	0%	129	34.9%	1	0%	-	-	-	HMMPfam_Radial_spoke
ZUFSP	221302	genome.wustl.edu	37	6	116977966	116977966	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145062.2	-1	validated	p.R281Q	0.937	349	0%	484	21.3%	12	16.6%	possibly_damaging(0.885)	tolerated(0.32)	neutral(0.370)	NULL
KPNA5	3841	genome.wustl.edu	37	6	117013233	117013233	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002269.2	+1	reviewed	p.N52D	1.000	164	0%	214	37.4%	1	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_IBB,superfamily_ARM repeat
GPRC6A	222545	genome.wustl.edu	37	6	117127604	117127604	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148963.2	-1	validated	p.L422I	0.679	97	0%	55	25.5%	0	-	benign(0.049)	tolerated(0.95)	neutral(0.003)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GPRC6A	222545	genome.wustl.edu	37	6	117127980	117127980	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148963.2	-1	validated	p.N296K	0.007	197	0%	118	32.2%	0	-	benign(0.002)	tolerated(0.15)	neutral(0.241)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
ROS1	6098	genome.wustl.edu	37	6	117647553	117647553	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002944.2	-1	reviewed	p.Q1797H	0.017	239	0%	185	38.4%	0	-	benign(0.422)	tolerated(0.09)	neutral(0.433)	HMMSmart_FN3,superfamily_FN_III-like
ROS1	6098	genome.wustl.edu	37	6	117681082	117681082	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002944.2	-1	reviewed	p.A1180T	0.000	200	0%	144	28.5%	0	-	benign(0.001)	tolerated(0.65)	neutral(0.003)	superfamily_SSF63825
ROS1	6098	genome.wustl.edu	37	6	117725515	117725515	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002944.2	-1	reviewed	p.A122	0.998	219	0%	326	32.8%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
NUS1	116150	genome.wustl.edu	37	6	118014217	118014217	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138459.3	+1	validated	p.R143I	1.000	88	0%	121	62%	7	71.4%	probably_damaging(0.992)	tolerated(0.05)	deleterious(0.793)	superfamily_Undecaprenyl diphosphate synthase
SLC35F1	222553	genome.wustl.edu	37	6	118588241	118588241	+	Silent	SNP	C	C	T	rs188928224	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029858.3	+1	validated	p.I187	0.121	558	0%	668	35%	1	0%	-	-	-	HMMPfam_DUF914
C6orf170	221322	genome.wustl.edu	37	6	121613210	121613210	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152730.4	-1	validated	p.K454R	1.000	150	0%	121	33.9%	1	100%	possibly_damaging(0.942)	tolerated(0.75)	neutral(0.389)	NULL
C6orf170	221322	genome.wustl.edu	37	6	121624823	121624823	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152730.4	-1	validated	p.L340F	1.000	229	0%	211	27%	3	100%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
GJA1	2697	genome.wustl.edu	37	6	121768708	121768708	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000165.3	+1	reviewed	p.R239W	1.000	208	0%	357	36.1%	174	33.9%	probably_damaging(0.994)	deleterious(0.02)	deleterious(0.835)	NULL
SMPDL3A	10924	genome.wustl.edu	37	6	123126204	123126204	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006714.3	+1	validated	p.D297Y	1.000	81	0%	90	43.3%	15	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Metallophos,superfamily_SSF56300
SMPDL3A	10924	genome.wustl.edu	37	6	123127393	123127393	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006714.3	+1	validated	p.S312F	1.000	385	0%	470	30.9%	10	0%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	superfamily_SSF56300
TRDN	10345	genome.wustl.edu	37	6	123818395	123818395	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006073.2	-1	validated	p.Q266K	1.000	113	0%	119	28.6%	0	-	possibly_damaging(0.666)	tolerated(0.44)	neutral(0.248)	HMMPfam_Triadin
TRDN	10345	genome.wustl.edu	37	6	123833494	123833494	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006073.2	-1	validated	p.E188D	0.997	49	0%	36	47.2%	0	-	unknown(0)	deleterious(0)	-	HMMPfam_Triadin
NKAIN2	154215	genome.wustl.edu	37	6	124604217	124604217	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040214.1	+1	reviewed	p.F41V	1.000	417	0%	451	36.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_NKAIN
RNF217	154214	genome.wustl.edu	37	6	125402605	125402605	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152553.2	+1	provisional	p.L211I	1.000	333	0%	162	24.1%	0	-	benign(0.001)	tolerated(0.5)	neutral(0.010)	NULL
NCOA7	135112	genome.wustl.edu	37	6	126210830	126210830	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181782.3	+1	validated	p.E544*	1.000	39	0%	39	38.5%	1	0%	-	-	-	NULL
TRMT11	60487	genome.wustl.edu	37	6	126333966	126333966	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031712.2	+1	validated	p.E325D	0.161	353	0%	371	22.1%	11	36.3%	benign(0)	tolerated(0.62)	neutral(0.004)	HMMPfam_UPF0020,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
RNF146	81847	genome.wustl.edu	37	6	127608617	127608617	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030963.2	+1	provisional	p.E286K	1.000	197	0%	109	33%	51	37.2%	possibly_damaging(0.892)	deleterious(0.02)	deleterious(0.734)	NULL
ECHDC1	55862	genome.wustl.edu	37	6	127648254	127648254	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001139510.1	-1	validated	p.E92*	0.784	206	0%	254	29.1%	17	11.7%	-	-	-	HMMPfam_ECH,superfamily_ClpP/crotonase
KIAA0408	9729	genome.wustl.edu	37	6	127767691	127767691	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014702.4	-1	validated	p.C591	0.001	278	0%	302	32.1%	0	-	-	-	-	NULL
KIAA0408	9729	genome.wustl.edu	37	6	127768652	127768652	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014702.4	-1	validated	p.R271I	1.000	185	0%	135	33.3%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
KIAA0408	9729	genome.wustl.edu	37	6	127768765	127768765	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014702.4	-1	validated	p.K233	0.059	73	0%	74	36.5%	0	-	-	-	-	NULL
SOGA3	387104	genome.wustl.edu	37	6	127794456	127794456	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012279.2	-1	validated	p.V938	1.000	149	0%	279	23.7%	0	-	-	-	-	NULL
SOGA3	387104	genome.wustl.edu	37	6	127834111	127834111	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012279.2	-1	validated	p.E470D	1.000	508	0%	699	35.8%	0	-	benign(0.072)	tolerated(0.06)	neutral(0.328)	NULL
SOGA3	387104	genome.wustl.edu	37	6	127837061	127837061	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012279.2	-1	validated	p.N233K	1.000	13	0.000	7	0.571	0	-	possibly_damaging(0.763)	tolerated(0.25)	neutral(0.320)	NULL
THEMIS	387357	genome.wustl.edu	37	6	128134152	128134152	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010923.2	-1	reviewed	p.R545I	1.000	168	0%	138	20.3%	1	100%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
THEMIS	387357	genome.wustl.edu	37	6	128134506	128134506	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010923.2	-1	reviewed	p.P427H	1.000	153	0%	132	35.6%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PTPRK	5796	genome.wustl.edu	37	6	128298134	128298134	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135648.1	-1	validated	p.F1265L	1.000	304	0.3%	333	33.9%	21	33.3%	probably_damaging(0.973)	deleterious(0.04)	deleterious(0.764)	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
PTPRK	5796	genome.wustl.edu	37	6	128304112	128304112	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135648.1	-1	validated	p.F1140C	1.000	146	0%	157	36.3%	12	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
LAMA2	3908	genome.wustl.edu	37	6	129204500	129204500	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000426.3	+1	reviewed	p.R37I	1.000	20	0%	20	25%	0	-	unknown(0)	deleterious(0.01)	-	HMMSmart_LamNT
LAMA2	3908	genome.wustl.edu	37	6	129475707	129475707	+	Missense_Mutation	SNP	G	G	A	rs182958473	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000426.3	+1	reviewed	p.R362K	1.000	206	0%	254	31.1%	1	0%	benign(0.002)	tolerated(0.57)	neutral(0.006)	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_ConA_like_lec_gl,superfamily_SSF57196
LAMA2	3908	genome.wustl.edu	37	6	129486815	129486815	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000426.3	+1	reviewed	p.R434Q	0.000	217	0%	198	28.8%	2	0%	benign(0.002)	tolerated(0.58)	neutral(0.005)	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_ConA_like_lec_gl,superfamily_SSF57196
LAMA2	3908	genome.wustl.edu	37	6	129513873	129513873	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000426.3	+1	reviewed	p.R553*	0.007	170	0%	109	27.5%	2	50%	-	-	-	superfamily_ConA_like_lec_gl
LAMA2	3908	genome.wustl.edu	37	6	129573286	129573286	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000426.3	+1	reviewed	p.E648*	1.000	133	0%	175	32.6%	0	-	-	-	-	HMMPfam_Laminin_B,superfamily_ConA_like_lec_gl,HMMSmart_LamB
LAMA2	3908	genome.wustl.edu	37	6	129581881	129581881	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000426.3	+1	reviewed	p.A708T	0.936	273	0%	176	31.2%	4	0%	benign(0.169)	tolerated(0.13)	neutral(0.268)	HMMPfam_Laminin_B,superfamily_ConA_like_lec_gl,HMMSmart_LamB
LAMA2	3908	genome.wustl.edu	37	6	129591822	129591822	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000426.3	+1	reviewed	p.F792L	1.000	273	0%	167	31.7%	0	-	possibly_damaging(0.866)	tolerated(0.07)	deleterious(0.655)	HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,superfamily_ConA_like_lec_gl,superfamily_SSF57196
LAMA2	3908	genome.wustl.edu	37	6	129663487	129663487	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000426.3	+1	reviewed	e30-1	1.000	198	0%	185	36.2%	0	-	-	-	-	-
LAMA2	3908	genome.wustl.edu	37	6	129766889	129766889	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000426.3	+1	reviewed	p.E2118K	1.000	110	0%	122	27.9%	2	0%	benign(0.052)	tolerated(0.89)	neutral(0.003)	superfamily_ConA_like_lec_gl,HMMPfam_Laminin_II
LAMA2	3908	genome.wustl.edu	37	6	129802562	129802562	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000426.3	+1	reviewed	p.R2576I	1.000	200	0%	178	36%	7	14.2%	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_1
LAMA2	3908	genome.wustl.edu	37	6	129802567	129802567	+	Nonsense_Mutation	SNP	C	C	T	rs121913572		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000426.3	+1	reviewed	p.R2578*	1.000	194	0%	177	33.3%	7	14.2%	-	-	-	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_1
LAMA2	3908	genome.wustl.edu	37	6	129826378	129826378	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000426.3	+1	reviewed	p.L2861I	0.212	141	0%	162	27.8%	8	0%	benign(0.001)	tolerated(0.35)	neutral(0.021)	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_1
TMEM244	253582	genome.wustl.edu	37	6	130154728	130154728	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010876.1	-1	provisional	p.L66I	0.992	174	0%	233	33.5%	0	-	possibly_damaging(0.875)	tolerated(0.25)	neutral(0.377)	NULL
L3MBTL3	84456	genome.wustl.edu	37	6	130425615	130425615	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032438.1	+1	validated	p.R594H	0.969	131	0%	132	31.8%	6	50%	possibly_damaging(0.951)	tolerated(0.12)	deleterious(0.655)	superfamily_CCHHC domain
SAMD3	154075	genome.wustl.edu	37	6	130475988	130475988	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017373.2	-1	validated	p.F335L	0.929	113	0.9%	130	30.8%	1	0%	probably_damaging(0.998)	tolerated(0.43)	deleterious(0.488)	NULL
TMEM200A	114801	genome.wustl.edu	37	6	130762228	130762228	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052913.2	+1	provisional	p.R221*	0.876	116	0%	161	36%	3	0%	-	-	-	NULL
EPB41L2	2037	genome.wustl.edu	37	6	131276416	131276416	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001431.3	-1	validated	p.K178	0.014	508	0%	649	33%	3	66.6%	-	-	-	NULL
MED23	9439	genome.wustl.edu	37	6	131925428	131925428	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004830.2	-1	reviewed	p.K549T	1.000	139	0%	109	35.8%	2	50%	possibly_damaging(0.643)	deleterious(0)	deleterious(0.670)	NULL
MED23	9439	genome.wustl.edu	37	6	131929076	131929076	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004830.2	-1	reviewed	p.E405*	1.000	185	0%	159	32.1%	2	50%	-	-	-	NULL
ENPP3	5169	genome.wustl.edu	37	6	131995305	131995305	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005021.3	+1	reviewed	p.L216V	0.939	84	0%	81	38.3%	7	57.1%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Phosphodiest,superfamily_Alkaline_phosphatase_core
CTAGE9	643854	genome.wustl.edu	37	6	132031210	132031210	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145659.1	-1	provisional	p.K316N	0.000	215	0%	421	31.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ENPP3	5169	genome.wustl.edu	37	6	132043369	132043369	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005021.3	+1	reviewed	p.L524I	1.000	255	0%	276	27.9%	0	-	possibly_damaging(0.927)	tolerated(0.1)	deleterious(0.661)	superfamily_Alkaline_phosphatase_core
ENPP3	5169	genome.wustl.edu	37	6	132043403	132043403	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005021.3	+1	reviewed	p.T535I	1.000	320	0%	342	34.5%	3	100%	probably_damaging(0.968)	deleterious(0)	deleterious(0.855)	NULL
ENPP1	5167	genome.wustl.edu	37	6	132204843	132204843	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006208.2	+1	reviewed	p.K747T	0.241	146	0%	153	32.7%	0	-	benign(0.005)	tolerated(0.58)	neutral(0.005)	HMMSmart_NUC,superfamily_SSF54060
ENPP1	5167	genome.wustl.edu	37	6	132206104	132206104	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006208.2	+1	reviewed	p.R782Q	0.001	375	0.3%	588	25%	0	-	benign(0.002)	tolerated(0.64)	neutral(0.003)	HMMSmart_NUC,superfamily_SSF54060
CTGF	1490	genome.wustl.edu	37	6	132270668	132270668	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001901.2	-1	reviewed	p.I262	1.000	140	0%	222	35.1%	169	10.6%	-	-	-	HMMSmart_SM00041,HMMPfam_Cys_knot
STX7	8417	genome.wustl.edu	37	6	132793454	132793454	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000434788	-1	known	e3+1	0.990	396	0%	430	35.1%	23	39.1%	benign(0)	tolerated(0.58)	neutral(0.005)	-
TAAR6	319100	genome.wustl.edu	37	6	132891982	132891982	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175067.1	+1	reviewed	p.D174	0.000	201	0%	224	36.6%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
TAAR2	9287	genome.wustl.edu	37	6	132938860	132938860	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033080.1	-1	validated	p.R162I	0.000	67	0%	110	42.7%	0	-	benign(0.016)	tolerated(0.38)	neutral(0.018)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
TAAR1	134864	genome.wustl.edu	37	6	132966342	132966342	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138327.1	-1	provisional	p.F267L	1.000	73	1.4%	41	26.8%	0	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_7tm_1,superfamily_SSF81321
VNN1	8876	genome.wustl.edu	37	6	133005614	133005614	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004666.2	-1	reviewed	p.N407H	0.000	111	0%	151	36.4%	0	-	benign(0.002)	tolerated(0.14)	neutral(0.249)	NULL
VNN2	8875	genome.wustl.edu	37	6	133070965	133070965	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004665.2	-1	reviewed	p.T414A	0.007	109	0%	140	37.9%	0	-	probably_damaging(0.972)	deleterious(0.01)	deleterious(0.820)	NULL
LOC285735	285735	genome.wustl.edu	37	6	133421209	133421209	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026969.1	+1	predicted	NULL	0.068	255	0%	323	33.1%	0	-	-	-	-	-
EYA4	2070	genome.wustl.edu	37	6	133783489	133783489	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004100.4	+1	reviewed	p.L152I	1.000	300	0%	317	29.7%	0	-	probably_damaging(0.994)	tolerated(0.14)	deleterious(0.702)	NULL
EYA4	2070	genome.wustl.edu	37	6	133802626	133802626	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004100.4	+1	reviewed	p.P332	0.989	122	0%	90	47.8%	0	-	-	-	-	NULL
EYA4	2070	genome.wustl.edu	37	6	133844203	133844203	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004100.4	+1	reviewed	p.C542*	0.413	121	0%	107	29.9%	0	-	-	-	-	HMMPfam_Hydrolase
SGK1	6446	genome.wustl.edu	37	6	134491431	134491431	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143676.1	-1	reviewed	p.A519V	1.000	79	0%	127	33.9%	64	34.3%	benign(0.001)	tolerated(0.27)	neutral(0.034)	HMMSmart_S_TK_X,HMMPfam_Pkinase_C
HBS1L	10767	genome.wustl.edu	37	6	135299849	135299849	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006620.3	-1	reviewed	p.N589H	1.000	182	0%	124	32.3%	31	35.4%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_GTP_EFTU_D3,superfamily_EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
HBS1L	10767	genome.wustl.edu	37	6	135306526	135306526	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006620.3	-1	reviewed	p.R482Q	1.000	154	0%	177	30.5%	21	33.3%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	superfamily_Translation proteins,superfamily_P-loop containing nucleoside triphosphate hydrolases
AHI1	54806	genome.wustl.edu	37	6	135639675	135639675	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134830.1	-1	reviewed	p.K1136N	0.005	191	0%	215	33%	3	100%	possibly_damaging(0.925)	deleterious(0.02)	deleterious(0.756)	NULL
BCLAF1	9774	genome.wustl.edu	37	6	136599630	136599630	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014739.2	-1	reviewed	p.R130H	1.000	222	0%	194	13.9%	31	0%	unknown(0)	deleterious(0.05)	-	NULL
MAP3K5	4217	genome.wustl.edu	37	6	136960756	136960756	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005923.3	-1	reviewed	p.R620I	1.000	99	0%	124	34.7%	2	0%	probably_damaging(0.994)	deleterious(0.03)	deleterious(0.817)	NULL
MAP3K5	4217	genome.wustl.edu	37	6	137015347	137015347	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005923.3	-1	reviewed	p.R395Q	1.000	195	0%	212	30.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
IL20RA	53832	genome.wustl.edu	37	6	137330412	137330412	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000367746	-1	known	p.L207	0.000	171	0%	265	29.8%	0	-	-	-	-	NULL
IFNGR1	3459	genome.wustl.edu	37	6	137522142	137522142	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000416.2	-1	reviewed	p.S246Y	0.001	92	0%	132	30.3%	25	32%	probably_damaging(0.991)	deleterious(0.02)	deleterious(0.827)	HMMPfam_IFNGR1
IFNGR1	3459	genome.wustl.edu	37	6	137540444	137540444	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000416.2	-1	reviewed	p.L7	0.000	37	0%	31	29%	10	50%	-	-	-	HMMPfam_IFNGR1
OLIG3	167826	genome.wustl.edu	37	6	137815294	137815294	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175747.2	-1	provisional	p.S5L	1.000	29	0%	28	25%	0	-	unknown(0)	deleterious(0)	-	NULL
KIAA1244	57221	genome.wustl.edu	37	6	138582667	138582667	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020340.4	+1	validated	p.L370I	1.000	125	0%	174	35.1%	3	100%	benign(0.393)	tolerated(0.28)	neutral(0.158)	NULL
KIAA1244	57221	genome.wustl.edu	37	6	138584676	138584676	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020340.4	+1	validated	p.R686W	0.997	19	0%	31	35.5%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_Sec7
KIAA1244	57221	genome.wustl.edu	37	6	138608297	138608297	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020340.4	+1	validated	p.E958*	1.000	82	0%	133	20.3%	0	-	-	-	-	NULL
HEBP2	23593	genome.wustl.edu	37	6	138734105	138734105	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014320.2	+1	validated	p.D170N	0.812	319	0.3%	441	34.2%	316	44.3%	benign(0.003)	tolerated(1)	-	HMMPfam_SOUL
NHSL1	57224	genome.wustl.edu	37	6	138752362	138752362	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144060.1	-1	validated	p.N1040K	0.000	69	0%	131	32.8%	8	50%	benign(0.001)	tolerated(1)	-	NULL
CCDC28A	25901	genome.wustl.edu	37	6	139097218	139097218	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015439.2	+1	validated	p.V77	0.014	107	0%	251	34.3%	6	50%	-	-	-	NULL
REPS1	85021	genome.wustl.edu	37	6	139226213	139226213	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031922.3	-1	validated	p.F792L	1.000	131	0%	256	35.2%	85	47%	probably_damaging(0.987)	tolerated(0.12)	deleterious(0.697)	NULL
TXLNB	167838	genome.wustl.edu	37	6	139564168	139564168	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153235.3	-1	validated	p.P517L	0.000	77	0%	121	40.5%	0	-	benign(0)	tolerated(0.26)	neutral(0.034)	NULL
NMBR	4829	genome.wustl.edu	37	6	142409481	142409481	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002511.2	-1	validated	p.F105L	1.000	49	0%	79	31.6%	0	-	benign(0.005)	tolerated(1)	-	HMMPfam_7tm_1,superfamily_SSF81321
GPR126	57211	genome.wustl.edu	37	6	142630754	142630754	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198569.2	+1	reviewed	p.L26V	0.000	246	0.4%	209	34%	3	33.3%	benign(0.051)	deleterious(0)	neutral(0.448)	NULL
GPR126	57211	genome.wustl.edu	37	6	142725013	142725013	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198569.2	+1	reviewed	p.R677Q	0.011	163	0%	175	33.1%	0	-	benign(0.046)	tolerated(0.38)	neutral(0.020)	NULL
HIVEP2	3097	genome.wustl.edu	37	6	143074653	143074653	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006734.3	-1	provisional	p.S2311L	0.980	132	0%	207	31.4%	9	44.4%	probably_damaging(0.98)	deleterious(0.04)	deleterious(0.773)	NULL
HIVEP2	3097	genome.wustl.edu	37	6	143082656	143082656	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006734.3	-1	provisional	p.C1855	1.000	122	0%	86	33.7%	8	87.5%	-	-	-	NULL
HIVEP2	3097	genome.wustl.edu	37	6	143094288	143094288	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006734.3	-1	provisional	p.L530I	1.000	224	0%	297	28.3%	2	0%	probably_damaging(0.991)	tolerated(0.22)	deleterious(0.486)	NULL
STX11	8676	genome.wustl.edu	37	6	144508337	144508337	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003764.3	+1	reviewed	p.E191D	1.000	25	0%	32	28.1%	2	0%	benign(0.154)	tolerated(0.66)	neutral(0.016)	superfamily_t-snare
UTRN	7402	genome.wustl.edu	37	6	144779923	144779923	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007124.2	+1	reviewed	p.E768*	0.993	71	0%	92	28.3%	2	0%	-	-	-	HMMSmart_SPEC,superfamily_Spectrin
UTRN	7402	genome.wustl.edu	37	6	144869958	144869958	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007124.2	+1	reviewed	p.E2260*	0.788	123	0%	172	32.6%	2	50%	-	-	-	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
FBXO30	84085	genome.wustl.edu	37	6	146126018	146126018	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032145.4	-1	reviewed	p.V508	0.996	67	0%	58	46.6%	5	40%	-	-	-	NULL
FBXO30	84085	genome.wustl.edu	37	6	146127048	146127048	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032145.4	-1	reviewed	p.I165R	0.915	343	0.3%	285	32.6%	3	66.6%	benign(0.039)	tolerated(0.55)	neutral(0.009)	NULL
SHPRH	257218	genome.wustl.edu	37	6	146267452	146267452	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042683.2	-1	validated	p.P413Q	1.000	325	0.6%	196	34.7%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
SHPRH	257218	genome.wustl.edu	37	6	146273496	146273496	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042683.2	-1	validated	p.S251Y	1.000	142	0%	74	33.8%	1	100%	benign(0)	tolerated(0.07)	neutral(0.319)	NULL
GRM1	2911	genome.wustl.edu	37	6	146720216	146720216	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000838.3	+1	reviewed	p.R681C	1.000	277	0%	307	22.8%	0	-	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	HMMPfam_7tm_3
GRM1	2911	genome.wustl.edu	37	6	146755479	146755479	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000838.3	+1	reviewed	p.A1044	0.516	33	0%	23	30.4%	0	-	-	-	-	NULL
ADGB	79747	genome.wustl.edu	37	6	147067146	147067146	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024694.3	+1	provisional	p.A1089V	0.005	140	0%	87	26.4%	0	-	benign(0.009)	tolerated(0.28)	neutral(0.032)	NULL
ADGB	79747	genome.wustl.edu	37	6	147073671	147073671	+	Missense_Mutation	SNP	C	C	T	rs186199600	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024694.3	+1	provisional	p.S1124L	0.910	147	0%	94	26.6%	0	-	benign(0.205)	tolerated(0.35)	neutral(0.041)	NULL
ADGB	79747	genome.wustl.edu	37	6	147122375	147122375	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024694.3	+1	provisional	p.R1532*	0.365	163	0%	191	31.4%	0	-	-	-	-	NULL
SASH1	23328	genome.wustl.edu	37	6	148664346	148664346	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015278.3	+1	validated	p.V48A	0.999	39	0%	34	35.3%	2	0%	benign(0.227)	deleterious(0.01)	neutral(0.428)	NULL
SASH1	23328	genome.wustl.edu	37	6	148840733	148840733	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015278.3	+1	validated	p.A305T	0.998	115	0%	159	34%	1	100%	probably_damaging(0.977)	deleterious(0)	deleterious(0.863)	NULL
TAB2	23118	genome.wustl.edu	37	6	149719195	149719195	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015093.4	+1	reviewed	p.R619*	1.000	216	0%	261	33.7%	13	7.6%	-	-	-	NULL
ZC3H12D	340152	genome.wustl.edu	37	6	149795403	149795403	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207360.2	-1	validated	p.V93M	1.000	60	0%	97	39.2%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
ZC3H12D	340152	genome.wustl.edu	37	6	149795674	149795674	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207360.2	-1	validated	p.E2	1.000	19	0%	11	45.5%	0	-	-	-	-	NULL
LATS1	9113	genome.wustl.edu	37	6	150022965	150022965	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004690.2	-1	reviewed	p.E100*	1.000	147	0%	265	22.3%	1	100%	-	-	-	superfamily_UBA-like
LATS1	9113	genome.wustl.edu	37	6	150023019	150023019	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004690.2	-1	reviewed	p.R82*	1.000	179	0%	366	35.2%	1	0%	-	-	-	NULL
ULBP2	80328	genome.wustl.edu	37	6	150266444	150266444	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025217.2	+1	provisional	e2-1	0.031	342	0%	672	23.8%	0	-	-	-	-	-
ULBP3	79465	genome.wustl.edu	37	6	150385730	150385730	+	Missense_Mutation	SNP	T	T	A	rs912558	byCluster;byFrequency;bySubmitter;by2Hit2Allele;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000438272	-1	known	p.L129F	0.000	200	0%	629	40.1%	6	50%	possibly_damaging(0.509)	deleterious(0.02)	deleterious(0.553)	superfamily_MHC_I/II-like_Ag-recog
ULBP3	79465	genome.wustl.edu	37	6	150387292	150387292	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024518.1	-1	provisional	p.H32R	0.000	117	0%	167	27.5%	1	100%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	superfamily_MHC antigen-recognition domain
MTHFD1L	25902	genome.wustl.edu	37	6	151277152	151277152	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015440.3	+1	validated	p.F583C	1.000	120	0%	216	31.9%	26	34.6%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_FTHFS,superfamily_P-loop containing nucleoside triphosphate hydrolases
AKAP12	9590	genome.wustl.edu	37	6	151671528	151671528	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005100.3	+1	reviewed	p.E668*	1.000	70	0%	199	34.2%	3	33.3%	-	-	-	NULL
AKAP12	9590	genome.wustl.edu	37	6	151671974	151671974	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005100.3	+1	reviewed	p.K816N	1.000	15	0%	39	35.9%	4	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_WSK
AKAP12	9590	genome.wustl.edu	37	6	151674853	151674853	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005100.3	+1	reviewed	p.K1776T	0.008	124	0%	314	35.4%	11	9%	probably_damaging(0.991)	deleterious(0.04)	deleterious(0.793)	NULL
C6orf211	79624	genome.wustl.edu	37	6	151789675	151789675	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024573.1	+1	predicted	p.L252	0.999	166	0%	226	27%	18	72.2%	-	-	-	HMMPfam_DUF89,superfamily_DUF89
C6orf97	80129	genome.wustl.edu	37	6	151894345	151894345	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025059.3	+1	validated	p.E271K	0.973	31	0%	83	36.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SYNE1	23345	genome.wustl.edu	37	6	152443792	152443792	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182961.2	-1	reviewed	p.D8725N	1.000	59	0%	105	30.5%	10	0%	benign(0.025)	tolerated(0.23)	neutral(0.043)	NULL
SYNE1	23345	genome.wustl.edu	37	6	152485332	152485332	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182961.2	-1	reviewed	p.S7919L	0.977	167	0%	203	25.6%	1	0%	benign(0.124)	tolerated(0.27)	neutral(0.044)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SYNE1	23345	genome.wustl.edu	37	6	152523035	152523035	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182961.2	-1	reviewed	p.R7690Q	0.994	181	0%	247	33.2%	1	0%	possibly_damaging(0.439)	tolerated(0.37)	neutral(0.162)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SYNE1	23345	genome.wustl.edu	37	6	152539492	152539492	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182961.2	-1	reviewed	p.L7364W	0.999	204	0%	266	31.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SYNE1	23345	genome.wustl.edu	37	6	152583190	152583190	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182961.2	-1	reviewed	p.L6317M	1.000	302	0%	366	29%	0	-	benign(0.087)	tolerated(0.12)	neutral(0.267)	superfamily_Spectrin repeat
SYNE1	23345	genome.wustl.edu	37	6	152637963	152637963	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000413186	-1	known	p.I5579	0.677	179	0%	217	24.4%	0	-	-	-	-	NULL
SYNE1	23345	genome.wustl.edu	37	6	152639391	152639391	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182961.2	-1	reviewed	p.G5466V	1.000	169	0.6%	257	34.6%	0	-	possibly_damaging(0.754)	-	-	HMMSmart_SM00150
SYNE1	23345	genome.wustl.edu	37	6	152642974	152642974	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182961.2	-1	reviewed	p.L5322P	1.000	291	0%	428	23.1%	0	-	probably_damaging(0.995)	-	-	NULL
SYNE1	23345	genome.wustl.edu	37	6	152652445	152652445	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182961.2	-1	reviewed	p.L4459F	1.000	146	0%	225	31.1%	0	-	probably_damaging(0.999)	-	-	HMMPfam_Spectrin,HMMSmart_SM00150
SYNE1	23345	genome.wustl.edu	37	6	152737754	152737754	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182961.2	-1	reviewed	p.G1940R	0.272	249	0.4%	308	34.4%	0	-	benign(0.005)	-	-	superfamily_Spectrin repeat
SYNE1	23345	genome.wustl.edu	37	6	152777024	152777024	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182961.2	-1	reviewed	p.F908L	1.000	192	0%	191	25.7%	0	-	possibly_damaging(0.706)	tolerated(0.14)	deleterious(0.504)	superfamily_Spectrin repeat
SYNE1	23345	genome.wustl.edu	37	6	152779939	152779939	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182961.2	-1	reviewed	p.L841I	1.000	190	0%	153	27.5%	0	-	possibly_damaging(0.878)	tolerated(0.47)	neutral(0.353)	NULL
VIP	7432	genome.wustl.edu	37	6	153077320	153077320	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000431366	+1	known	p.L79I	0.999	120	0%	52	25%	0	-	-	-	-	HMMPfam_Hormone_2,HMMSmart_SM00070,PatternScan_GLUCAGON
FBXO5	26271	genome.wustl.edu	37	6	153292504	153292504	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012177.3	-1	reviewed	p.R380C	0.970	131	0%	168	28.6%	15	40%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
RGS17	26575	genome.wustl.edu	37	6	153345589	153345589	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012419.4	-1	reviewed	p.N84K	1.000	260	0%	261	34.9%	0	-	benign(0.375)	deleterious(0)	deleterious(0.564)	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam
OPRM1	4988	genome.wustl.edu	37	6	154412195	154412195	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145279.1	+1	reviewed	p.T344N	1.000	299	0%	399	32.1%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OPRM1	4988	genome.wustl.edu	37	6	154412548	154412548	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145279.1	+1	reviewed	p.R462C	0.995	27	0%	39	28.2%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	superfamily_SSF81321
OPRM1	4988	genome.wustl.edu	37	6	154439827	154439827	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145279.1	+1	reviewed	p.L485M	1.000	229	0%	267	38.6%	0	-	benign(0.083)	tolerated(0.26)	neutral(0.040)	NULL
CNKSR3	154043	genome.wustl.edu	37	6	154727613	154727613	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173515.2	-1	validated	p.A515T	1.000	108	0%	151	31.1%	10	50%	possibly_damaging(0.822)	deleterious(0.01)	deleterious(0.717)	HMMPfam_DUF1170
SCAF8	22828	genome.wustl.edu	37	6	155129920	155129920	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014892.3	+1	validated	p.R405Q	1.000	223	0%	272	32.7%	6	0%	unknown(0)	deleterious(0.02)	-	NULL
SCAF8	22828	genome.wustl.edu	37	6	155145367	155145367	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014892.3	+1	validated	e17-1	1.000	219	0.5%	204	32.8%	0	-	-	-	-	-
SCAF8	22828	genome.wustl.edu	37	6	155154099	155154099	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014892.3	+1	validated	p.R1129Q	0.998	116	0%	141	31.9%	7	71.4%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	NULL
TIAM2	26230	genome.wustl.edu	37	6	155485641	155485641	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012454.3	+1	reviewed	p.P707	0.042	57	0%	47	36.2%	0	-	-	-	-	NULL
TIAM2	26230	genome.wustl.edu	37	6	155504465	155504465	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012454.3	+1	reviewed	p.S965	0.994	93	0%	173	31.8%	0	-	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
TIAM2	26230	genome.wustl.edu	37	6	155565822	155565822	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012454.3	+1	reviewed	p.M1150V	1.000	319	0%	384	34.6%	0	-	probably_damaging(0.991)	deleterious(0.04)	deleterious(0.793)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
TIAM2	26230	genome.wustl.edu	37	6	155574087	155574087	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012454.3	+1	reviewed	p.S1375	0.001	206	0%	297	31.6%	1	0%	-	-	-	HMMSmart_SM00233,superfamily_PH domain-like
TFB1M	51106	genome.wustl.edu	37	6	155581427	155581427	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016020.2	-1	validated	p.K258N	0.891	196	0%	319	33.2%	22	22.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RrnaAD,superfamily_SSF53335
TFB1M	51106	genome.wustl.edu	37	6	155632338	155632338	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016020.2	-1	validated	p.F90C	1.000	140	0%	202	37.1%	12	41.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RrnaAD,HMMSmart_rADc,superfamily_SSF53335
ARID1B	57492	genome.wustl.edu	37	6	157527507	157527507	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017519.2	+1	validated	p.D1726	0.815	136	0%	206	35.4%	23	65.2%	-	-	-	NULL
ZDHHC14	79683	genome.wustl.edu	37	6	158049496	158049496	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000341375	+1	known	p.S111L	1.000	211	0%	267	30.7%	5	0%	-	-	-	NULL
SYNJ2	8871	genome.wustl.edu	37	6	158490642	158490642	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003898.3	+1	reviewed	p.S626L	0.994	236	0%	371	33.7%	5	20%	probably_damaging(0.998)	tolerated(0.1)	deleterious(0.761)	HMMSmart_SM00128,HMMPfam_Exo_endo_phos,superfamily_DNase I-like
GTF2H5	404672	genome.wustl.edu	37	6	158613125	158613125	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207118.2	+1	reviewed	p.N51S	0.910	96	0%	222	31.5%	65	16.9%	benign(0)	tolerated(0.59)	neutral(0.004)	HMMPfam_Tbf5
EZR	7430	genome.wustl.edu	37	6	159197491	159197491	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001111077.1	-1	reviewed	p.I248	1.000	228	0%	363	28.4%	250	48%	-	-	-	HMMPfam_FERM_C,superfamily_SSF50729
RSPH3	83861	genome.wustl.edu	37	6	159407451	159407451	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031924.4	-1	validated	p.L211	0.000	189	0%	358	35.5%	4	50%	-	-	-	HMMPfam_Radial_spoke_3
TAGAP	117289	genome.wustl.edu	37	6	159464681	159464681	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_054114.3	-1	reviewed	p.I30V	0.669	167	0%	176	35.2%	1	0%	benign(0.001)	tolerated(0.85)	neutral(0.001)	NULL
TAGAP	117289	genome.wustl.edu	37	6	159465015	159465015	+	Missense_Mutation	SNP	A	A	G	rs181275709	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_054114.3	-1	reviewed	p.S26P	0.857	457	0%	586	32.3%	1	0%	benign(0.005)	tolerated(0.07)	neutral(0.319)	NULL
FNDC1	84624	genome.wustl.edu	37	6	159653159	159653159	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032532.2	+1	validated	p.E539*	0.007	38	0%	58	27.6%	1	0%	-	-	-	NULL
FNDC1	84624	genome.wustl.edu	37	6	159653499	159653499	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032532.2	+1	validated	p.R652H	0.000	28	0%	17	35.3%	2	0%	unknown(0)	tolerated(0.07)	-	NULL
FNDC1	84624	genome.wustl.edu	37	6	159654782	159654782	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032532.2	+1	validated	p.D1080N	0.000	14	0%	22	36.4%	4	0%	unknown(0)	deleterious(0.03)	-	NULL
SOD2	6648	genome.wustl.edu	37	6	160113601	160113601	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000452684	-1	known	p.E127D	0.000	41	0%	77	40.3%	0	-	unknown(0)	deleterious(0.01)	-	NULL
WTAP	9589	genome.wustl.edu	37	6	160176573	160176573	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004906.3	+1	reviewed	p.R374Q	1.000	44	0%	140	40.7%	72	50%	possibly_damaging(0.783)	deleterious(0.02)	deleterious(0.676)	NULL
TCP1	6950	genome.wustl.edu	37	6	160201987	160201987	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030752.2	-1	reviewed	p.R318H	1.000	201	0%	254	36.6%	270	48.8%	possibly_damaging(0.869)	tolerated(0.12)	deleterious(0.598)	HMMPfam_Cpn60_TCP1,superfamily_GroEL-ATPase,superfamily_SSF52029,superfamily_SSF54849
IGF2R	3482	genome.wustl.edu	37	6	160496917	160496917	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000876.2	+1	reviewed	p.P1735	0.001	158	0%	310	30.6%	46	54.3%	-	-	-	HMMPfam_CIMR,superfamily_Mannose 6-phosphate receptor domain
SLC22A2	6582	genome.wustl.edu	37	6	160677706	160677706	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003058.2	-1	reviewed	p.Q153R	1.000	144	0%	209	34%	0	-	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter
SLC22A2	6582	genome.wustl.edu	37	6	160679619	160679619	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003058.2	-1	reviewed	p.A57	0.221	43	0%	40	37.5%	0	-	-	-	-	NULL
LPA	4018	genome.wustl.edu	37	6	160952882	160952882	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005577.2	-1	reviewed	p.K2001I	1.000	334	0%	444	21.4%	0	-	benign(0.304)	tolerated(0.11)	neutral(0.366)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
LPA	4018	genome.wustl.edu	37	6	160966540	160966540	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005577.2	-1	reviewed	p.I1777T	0.037	222	0%	292	41.1%	0	-	benign(0.138)	tolerated(0.23)	neutral(0.053)	HMMPfam_Kringle,HMMSmart_SM00130,superfamily_Kringle-like,PatternScan_KRINGLE_1
MAP3K4	4216	genome.wustl.edu	37	6	161470457	161470457	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005922.2	+1	reviewed	p.D385Y	1.000	157	0%	183	24.6%	11	27.2%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MAP3K4	4216	genome.wustl.edu	37	6	161470555	161470555	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005922.2	+1	reviewed	p.K417N	1.000	167	0%	155	30.3%	7	28.5%	possibly_damaging(0.935)	tolerated(0.14)	deleterious(0.630)	NULL
PARK2	5071	genome.wustl.edu	37	6	162394380	162394380	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004562.2	-1	reviewed	p.A230T	1.000	212	0%	429	31.9%	0	-	benign(0)	tolerated(0.18)	neutral(0.056)	NULL
SFT2D1	113402	genome.wustl.edu	37	6	166743676	166743676	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145169.1	-1	provisional	p.F41	0.992	107	0%	157	21%	56	35.7%	-	-	-	HMMPfam_SFT2
RPS6KA2	6196	genome.wustl.edu	37	6	166836822	166836822	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006932.1	-1	reviewed	p.F563	1.000	58	0%	76	31.6%	4	0%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
RNASET2	8635	genome.wustl.edu	37	6	167360176	167360176	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003730.4	-1	reviewed	p.E85D	1.000	86	0%	116	32.8%	47	31.9%	probably_damaging(0.991)	tolerated(0.32)	neutral(0.468)	HMMPfam_Ribonuclease_T2,superfamily_Ribonuclease Rh-like
FGFR1OP	11116	genome.wustl.edu	37	6	167436091	167436091	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007045.2	+1	reviewed	p.D258	1.000	57	0%	91	29.7%	19	26.3%	-	-	-	NULL
CCR6	1235	genome.wustl.edu	37	6	167550090	167550090	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004367.5	+1	reviewed	p.I124	1.000	109	0%	194	30.4%	1	0%	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
CCR6	1235	genome.wustl.edu	37	6	167550188	167550188	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004367.5	+1	reviewed	p.R157Q	0.009	93	0%	132	34.1%	1	0%	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	HMMPfam_7tm_1,superfamily_SSF81321
GPR31	2853	genome.wustl.edu	37	6	167570858	167570858	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005299.2	-1	validated	p.E154D	0.000	32	0%	42	33.3%	0	-	benign(0.01)	tolerated(0.62)	neutral(0.005)	HMMPfam_7tm_1,superfamily_SSF81321
UNC93A	54346	genome.wustl.edu	37	6	167719501	167719501	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018974.3	+1	validated	p.V313	0.530	207	0%	226	38.9%	0	-	-	-	-	superfamily_MFS_gen_substrate_transporter
UNC93A	54346	genome.wustl.edu	37	6	167721356	167721356	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018974.3	+1	validated	p.L356M	1.000	120	0%	116	42.2%	0	-	benign(0.422)	tolerated(0.09)	neutral(0.433)	superfamily_MFS_gen_substrate_transporter
TTLL2	83887	genome.wustl.edu	37	6	167754223	167754223	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031949.4	+1	validated	p.R279W	0.030	175	0%	243	34.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like
TTLL2	83887	genome.wustl.edu	37	6	167754699	167754699	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031949.4	+1	validated	p.I437	0.000	120	0%	244	28.3%	0	-	-	-	-	NULL
TTLL2	83887	genome.wustl.edu	37	6	167754758	167754758	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031949.4	+1	validated	p.S457Y	0.021	104	0%	192	40.6%	0	-	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
TCP10	6953	genome.wustl.edu	37	6	167787912	167787912	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004610.3	-1	validated	p.S239Y	0.000	459	0%	581	18.4%	0	-	possibly_damaging(0.911)	deleterious(0)	deleterious(0.807)	HMMPfam_Tcp10_C
MLLT4	4301	genome.wustl.edu	37	6	168276043	168276043	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040001.1	+1	validated	p.Y202D	1.000	127	0%	81	29.6%	5	0%	possibly_damaging(0.826)	deleterious(0)	deleterious(0.758)	NULL
MLLT4	4301	genome.wustl.edu	37	6	168303009	168303009	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040001.1	+1	validated	p.E530D	1.000	342	0.3%	458	28.8%	15	73.3%	benign(0.235)	tolerated(0.09)	neutral(0.320)	NULL
KIF25	3834	genome.wustl.edu	37	6	168443279	168443279	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030615.2	+1	reviewed	p.A290T	0.119	99	0%	85	20%	0	-	benign(0.02)	tolerated(0.08)	neutral(0.301)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIF25	3834	genome.wustl.edu	37	6	168445512	168445512	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030615.2	+1	reviewed	p.D331N	0.958	200	0%	245	29.8%	0	-	probably_damaging(0.994)	tolerated(0.76)	neutral(0.453)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIF25	3834	genome.wustl.edu	37	6	168445517	168445517	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030615.2	+1	reviewed	p.A332	0.024	209	0.5%	236	33.1%	0	-	-	-	-	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
DACT2	168002	genome.wustl.edu	37	6	168709108	168709108	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_214462.3	-1	validated	p.S443R	0.002	166	0%	170	27.6%	1	0%	probably_damaging(0.99)	deleterious(0.05)	deleterious(0.787)	NULL
THBS2	7058	genome.wustl.edu	37	6	169632885	169632885	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003247.2	-1	reviewed	p.F602L	0.991	76	0%	83	37.3%	17	0%	possibly_damaging(0.569)	tolerated(0.05)	deleterious(0.540)	HMMSmart_EGF,HMMPfam_EGF_CA,superfamily_SSF57196
THBS2	7058	genome.wustl.edu	37	6	169639737	169639737	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003247.2	-1	reviewed	p.S362	0.465	177	0%	239	35.6%	13	0%	-	-	-	HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1
THBS2	7058	genome.wustl.edu	37	6	169640686	169640686	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003247.2	-1	reviewed	p.S298L	1.000	102	0%	126	23%	10	0%	benign(0.269)	deleterious(0.02)	neutral(0.412)	NULL
WDR27	253769	genome.wustl.edu	37	6	170002355	170002355	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182552.3	-1	validated	p.P795H	0.983	95	0%	110	31.8%	6	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00320,superfamily_WD40 repeat-like
PHF10	55274	genome.wustl.edu	37	6	170112516	170112516	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018288.3	-1	reviewed	p.R308Q	0.935	281	0%	320	30.3%	29	13.7%	benign(0.17)	tolerated(0.37)	neutral(0.035)	NULL
PHF10	55274	genome.wustl.edu	37	6	170118935	170118935	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018288.3	-1	reviewed	p.E92*	1.000	140	0%	164	39.6%	24	16.6%	-	-	-	NULL
LINC00574	80069	genome.wustl.edu	37	6	170190293	170190293	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026780.1	+1	validated	NULL	0.001	285	0%	367	32.7%	0	-	-	-	-	-
LINC00574	80069	genome.wustl.edu	37	6	170190318	170190318	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026780.1	+1	validated	NULL	0.000	254	0%	335	34.9%	0	-	-	-	-	-
DLL1	28514	genome.wustl.edu	37	6	170594343	170594343	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005618.3	-1	reviewed	p.T344M	1.000	150	0%	244	34.4%	6	33.3%	possibly_damaging(0.742)	deleterious(0.03)	deleterious(0.637)	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_EGF/Laminin
PSMB1	5689	genome.wustl.edu	37	6	170852802	170852802	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002793.3	-1	reviewed	p.N107T	0.993	170	0%	256	37.5%	389	42.1%	benign(0.042)	deleterious(0)	neutral(0.447)	HMMPfam_Proteasome,superfamily_SSF56235
TBP	6908	genome.wustl.edu	37	6	170873691	170873691	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003194.4	+1	reviewed	p.R186C	1.000	126	0%	210	26.7%	12	58.3%	unknown(0)	deleterious(0.02)	-	HMMPfam_TBP,superfamily_TFIID_C/glycos_N
FAM20C	56975	genome.wustl.edu	37	7	296993	296993	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000510839	+1	known	p.R175*	0.985	76	0%	159	35.2%	47	0%	-	-	-	HMMPfam_DUF1193
HEATR2	54919	genome.wustl.edu	37	7	814701	814701	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017802.3	+1	validated	p.S714L	0.382	159	0%	296	31.8%	37	29.7%	possibly_damaging(0.856)	tolerated(0.06)	deleterious(0.653)	superfamily_ARM repeat
SUN1	23353	genome.wustl.edu	37	7	905627	905627	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130965.2	+1	reviewed	p.E635K	1.000	155	0%	200	31.5%	50	42%	benign(0.147)	tolerated(0.27)	neutral(0.046)	NULL
COX19	90639	genome.wustl.edu	37	7	1009065	1009065	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031617.2	-1	validated	p.E74D	0.980	272	0%	411	33.8%	16	25%	possibly_damaging(0.69)	tolerated(0.28)	neutral(0.278)	NULL
COX19	90639	genome.wustl.edu	37	7	1012843	1012843	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031617.2	-1	validated	p.K56N	1.000	236	0%	466	33%	18	22.2%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_CHCH
ELFN1	392617	genome.wustl.edu	37	7	1785513	1785513	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128636.2	+1	validated	p.F427	0.992	31	0%	38	26.3%	1	0%	-	-	-	NULL
EIF3B	8662	genome.wustl.edu	37	7	2414170	2414170	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037283.1	+1	validated	p.F606	0.993	107	0%	158	32.9%	224	39.7%	-	-	-	HMMPfam_eIF2A,superfamily_Dipeptidyl peptidase IV/CD26 N-terminal domain
CHST12	55501	genome.wustl.edu	37	7	2472713	2472713	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018641.3	+1	validated	p.D147N	1.000	10	0%	16	37.5%	10	30%	benign(0.188)	deleterious(0.03)	neutral(0.382)	HMMPfam_Sulfotransfer_2
CARD11	84433	genome.wustl.edu	37	7	2959050	2959050	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032415.3	-1	validated	p.F822L	1.000	63	0%	68	35.3%	1	0%	benign(0.001)	tolerated(0.51)	neutral(0.009)	NULL
CARD11	84433	genome.wustl.edu	37	7	2966406	2966406	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032415.3	-1	validated	p.D592Y	0.986	84	0%	140	29.3%	2	0%	possibly_damaging(0.455)	deleterious(0)	deleterious(0.594)	NULL
CARD11	84433	genome.wustl.edu	37	7	2974137	2974137	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032415.3	-1	validated	p.F490V	1.000	92	0%	193	32.1%	3	0%	probably_damaging(0.981)	tolerated(0.29)	neutral(0.455)	NULL
SDK1	221935	genome.wustl.edu	37	7	3658798	3658798	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152744.3	+1	validated	p.E129K	1.000	114	0%	124	28.2%	0	-	possibly_damaging(0.749)	tolerated(0.28)	neutral(0.306)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
SDK1	221935	genome.wustl.edu	37	7	4152925	4152925	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152744.3	+1	validated	p.R1147*	0.998	155	0%	220	29.5%	1	0%	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
FOXK1	221937	genome.wustl.edu	37	7	4799036	4799036	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037165.1	+1	validated	p.I502	0.095	16	0%	13	38.5%	6	50%	-	-	-	NULL
KIAA0415	9907	genome.wustl.edu	37	7	4823929	4823929	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014855.1	+1	validated	p.N239	1.000	15	0%	17	29.4%	38	36.8%	-	-	-	NULL
RBAK	57786	genome.wustl.edu	37	7	5103513	5103513	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021163.3	+1	reviewed	p.K142N	0.039	123	0%	177	27.1%	1	100%	possibly_damaging(0.604)	tolerated(0.32)	neutral(0.233)	NULL
WIPI2	26100	genome.wustl.edu	37	7	5256785	5256785	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015610.3	+1	validated	p.I181	0.970	121	0%	246	31.3%	67	44.7%	-	-	-	superfamily_WD40 repeat-like
SLC29A4	222962	genome.wustl.edu	37	7	5334518	5334518	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040661.1	+1	reviewed	p.T191M	1.000	37	0%	48	41.7%	3	33.3%	benign(0.13)	tolerated(0.2)	neutral(0.060)	HMMPfam_Nucleoside_tran,superfamily_MFS general substrate transporter
RNF216	54476	genome.wustl.edu	37	7	5754774	5754774	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207111.2	-1	reviewed	p.F581	0.821	81	0%	124	41.1%	34	44.1%	-	-	-	NULL
OCM	654231	genome.wustl.edu	37	7	5925716	5925716	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001097622.1	+1	validated	p.S109Y	1.000	235	0%	497	29.2%	0	-	probably_damaging(0.953)	deleterious(0)	deleterious(0.841)	HMMSmart_EFh,HMMPfam_efhand
CCZ1	51622	genome.wustl.edu	37	7	5951508	5951508	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015622.5	+1	validated	p.S266Y	1.000	339	0%	710	20.8%	25	44%	possibly_damaging(0.917)	tolerated(0.15)	deleterious(0.609)	HMMPfam_DUF2049
RSPH10B	222967	genome.wustl.edu	37	7	6006733	6006733	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173565.3	-1	validated	p.K5N	1.000	104	0%	273	17.2%	0	-	probably_damaging(0.976)	deleterious(0)	deleterious(0.863)	NULL
PMS2	5395	genome.wustl.edu	37	7	6026643	6026643	+	Missense_Mutation	SNP	G	G	T	rs63750947		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000535.5	-1	reviewed	p.L585I	0.000	87	0%	134	32.8%	3	33.3%	benign(0.125)	tolerated(0.53)	neutral(0.018)	NULL
PMS2	5395	genome.wustl.edu	37	7	6043660	6043660	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000535.5	-1	reviewed	p.L65I	0.990	155	0%	288	32.6%	4	0%	probably_damaging(0.995)	tolerated(0.44)	deleterious(0.470)	HMMPfam_HATPase_c,superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
USP42	84132	genome.wustl.edu	37	7	6180592	6180592	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032172.2	+1	validated	p.L258I	1.000	120	0%	161	26.1%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_UCH,superfamily_SSF54001
GRID2IP	392862	genome.wustl.edu	37	7	6579372	6579372	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145118.1	-1	validated	p.C187	0.006	36	0%	50	40%	0	-	-	-	-	NULL
ENSG00000198580	0	genome.wustl.edu	37	7	6715650	6715650	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000401847	+1	known	p.G277*	0.909	25	0%	35	22.9%	0	-	-	-	-	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF12	7559	genome.wustl.edu	37	7	6730531	6730531	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016265.3	-1	reviewed	p.R681I	1.000	179	0%	206	29.1%	0	-	probably_damaging(0.996)	tolerated(0.09)	deleterious(0.758)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF12	7559	genome.wustl.edu	37	7	6730647	6730647	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016265.3	-1	reviewed	p.F642	0.989	220	0%	245	36.3%	6	33.3%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
RSPH10B2	728194	genome.wustl.edu	37	7	6798760	6798760	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099697.1	+1	provisional	p.F100	0.991	284	0%	771	15.8%	0	-	-	-	-	HMMPfam_MORN,superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
RSPH10B2	728194	genome.wustl.edu	37	7	6826645	6826645	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099697.1	+1	provisional	p.L668R	0.000	236	0%	495	20.2%	0	-	benign(0.139)	tolerated(0.15)	neutral(0.253)	NULL
CCZ1B	221960	genome.wustl.edu	37	7	6861921	6861921	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198097.2	-1	predicted	p.F171L	1.000	76	0%	117	26.5%	23	26%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF2049
COL28A1	340267	genome.wustl.edu	37	7	7476037	7476037	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037763.2	-1	validated	p.R617*	1.000	250	0%	264	25.8%	0	-	-	-	-	NULL
COL28A1	340267	genome.wustl.edu	37	7	7571429	7571429	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037763.2	-1	validated	p.K77N	0.984	88	0%	82	39%	0	-	benign(0.009)	tolerated(0.18)	neutral(0.057)	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
MIOS	54468	genome.wustl.edu	37	7	7613271	7613271	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019005.3	+1	validated	p.D389Y	1.000	80	0%	74	21.6%	11	54.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NXPH1	30010	genome.wustl.edu	37	7	8790784	8790784	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152745.2	+1	reviewed	p.E67D	0.995	112	0%	108	27.8%	0	-	benign(0.002)	tolerated(0.1)	neutral(0.286)	HMMPfam_Neurexophilin
LOC340268	340268	genome.wustl.edu	37	7	9767390	9767390	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_041608.1	+1	model	NULL	0.953	120	0%	151	32.5%	0	-	-	-	-	-
THSD7A	221981	genome.wustl.edu	37	7	11676391	11676391	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015204.2	-1	validated	p.N130H	1.000	197	0%	257	41.6%	1	100%	probably_damaging(0.963)	tolerated(0.39)	neutral(0.422)	superfamily_TSP-1 type 1 repeat
VWDE	221806	genome.wustl.edu	37	7	12410289	12410289	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135924.1	-1	provisional	p.E597*	1.000	91	0%	43	34.9%	0	-	-	-	-	NULL
VWDE	221806	genome.wustl.edu	37	7	12419133	12419133	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135924.1	-1	provisional	p.I283	0.000	142	0%	164	36.6%	0	-	-	-	-	NULL
VWDE	221806	genome.wustl.edu	37	7	12428878	12428878	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135924.1	-1	provisional	p.Q117P	1.000	132	0%	143	38.5%	0	-	benign(0.139)	tolerated(0.29)	neutral(0.041)	NULL
SCIN	85477	genome.wustl.edu	37	7	12617779	12617779	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001112706.2	+1	validated	p.R97I	1.000	168	0%	187	39%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00262,HMMPfam_Gelsolin,superfamily_Actin depolymerizing proteins
SCIN	85477	genome.wustl.edu	37	7	12668785	12668785	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001112706.2	+1	validated	p.F419L	1.000	269	0%	318	29.6%	3	0%	probably_damaging(0.997)	tolerated(0.12)	deleterious(0.727)	HMMSmart_SM00262,HMMPfam_Gelsolin,superfamily_Actin depolymerizing proteins,superfamily_C-terminal gelsolin-like domain of Sec23/24
ETV1	2115	genome.wustl.edu	37	7	13946090	13946090	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004956.4	-1	validated	p.R359*	0.992	171	0%	159	35.2%	4	25%	-	-	-	"HMMPfam_Ets,HMMSmart_SM00413,superfamily_""Winged helix"" DNA-binding domain"
DGKB	1607	genome.wustl.edu	37	7	14378211	14378211	+	Missense_Mutation	SNP	C	C	T	rs61753126	byCluster;byFrequency;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004080.2	-1	reviewed	p.R685Q	0.119	282	0%	209	36.4%	0	-	benign(0.129)	tolerated(0.21)	neutral(0.055)	HMMPfam_DAGK_acc,HMMSmart_SM00045
DGKB	1607	genome.wustl.edu	37	7	14378231	14378231	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004080.2	-1	reviewed	p.K678N	1.000	266	0%	194	34.5%	0	-	benign(0.006)	deleterious(0.05)	neutral(0.345)	HMMPfam_DAGK_acc,HMMSmart_SM00045
AGMO	392636	genome.wustl.edu	37	7	15427133	15427133	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004320.1	-1	provisional	p.F285L	1.000	121	0%	130	26.2%	2	0%	benign(0.361)	tolerated(0.49)	neutral(0.125)	NULL
ISPD	729920	genome.wustl.edu	37	7	16445746	16445746	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001101426.3	-1	validated	p.V158	1.000	307	0%	276	32.2%	2	50%	-	-	-	HMMPfam_IspD,PatternScan_ISPD,superfamily_SSF53448
BZW2	28969	genome.wustl.edu	37	7	16729529	16729529	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014038.2	+1	validated	p.L217F	1.000	197	0%	211	34.6%	69	56.5%	possibly_damaging(0.925)	deleterious(0.03)	deleterious(0.738)	NULL
AHR	196	genome.wustl.edu	37	7	17362185	17362185	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001621.4	+1	validated	p.N105T	0.156	200	0%	221	29%	7	57.1%	benign(0)	tolerated(0.38)	neutral(0.018)	NULL
SNX13	23161	genome.wustl.edu	37	7	17855901	17855901	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015132.4	-1	reviewed	p.L619	0.425	80	0%	53	32.1%	4	25%	-	-	-	HMMPfam_PX,HMMSmart_SM00312,superfamily_PX domain
HDAC9	9734	genome.wustl.edu	37	7	18687588	18687588	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178425.2	+1	reviewed	p.E406*	1.000	110	0%	89	32.6%	1	0%	-	-	-	NULL
TWISTNB	221830	genome.wustl.edu	37	7	19737968	19737968	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002926.1	-1	validated	p.K330Q	1.000	277	0%	181	32.6%	7	85.7%	possibly_damaging(0.515)	deleterious(0)	deleterious(0.618)	NULL
MACC1	346389	genome.wustl.edu	37	7	20198862	20198862	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182762.3	-1	validated	p.I374M	0.992	82	0%	81	33.3%	0	-	possibly_damaging(0.911)	deleterious(0.02)	deleterious(0.746)	NULL
ABCB5	340273	genome.wustl.edu	37	7	20725412	20725412	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178559.5	+1	validated	p.K210E	0.347	118	0%	131	34.4%	0	-	benign(0.001)	tolerated(0.51)	neutral(0.009)	NULL
ABCB5	340273	genome.wustl.edu	37	7	20762822	20762822	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178559.5	+1	validated	p.E424*	1.000	182	0%	285	32.3%	0	-	-	-	-	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
SP4	6671	genome.wustl.edu	37	7	21469068	21469068	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000446800	+1	known	p.R72H	0.979	96	0%	172	34.3%	2	50%	unknown(0)	-	-	NULL
SP4	6671	genome.wustl.edu	37	7	21469411	21469411	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003112.3	+1	validated	p.A210T	1.000	61	0%	135	31.1%	1	100%	benign(0)	tolerated(0.24)	neutral(0.037)	NULL
DNAH11	8701	genome.wustl.edu	37	7	21628825	21628825	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003777.3	+1	reviewed	e12-1	1.000	207	0%	186	21.5%	0	-	-	-	-	-
DNAH11	8701	genome.wustl.edu	37	7	21630554	21630554	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003777.3	+1	reviewed	p.E730*	1.000	159	0%	114	31.6%	0	-	-	-	-	HMMPfam_DHC_N1
DNAH11	8701	genome.wustl.edu	37	7	21675558	21675558	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003777.3	+1	reviewed	p.N1529H	0.997	180	0%	301	32.6%	0	-	possibly_damaging(0.835)	deleterious(0.03)	deleterious(0.683)	HMMPfam_DHC_N2
DNAH11	8701	genome.wustl.edu	37	7	21827137	21827137	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003777.3	+1	reviewed	p.R3294Q	1.000	188	0%	167	33.5%	0	-	probably_damaging(1)	tolerated(0.4)	deleterious(0.516)	NULL
DNAH11	8701	genome.wustl.edu	37	7	21906202	21906202	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003777.3	+1	reviewed	p.E3878*	1.000	155	0%	275	33.8%	1	0%	-	-	-	HMMPfam_Dynein_heavy
DNAH11	8701	genome.wustl.edu	37	7	21912930	21912930	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003777.3	+1	reviewed	p.E4009	1.000	116	0%	100	39%	1	0%	-	-	-	HMMPfam_Dynein_heavy
DNAH11	8701	genome.wustl.edu	37	7	21934337	21934337	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003777.3	+1	reviewed	p.L4290I	0.979	261	0%	344	29.9%	1	100%	probably_damaging(1)	tolerated(0.75)	deleterious(0.501)	HMMPfam_Dynein_heavy
ENSG00000105889	0	genome.wustl.edu	37	7	22478172	22478172	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000404369	-1	known	p.F322C	0.003	199	0%	230	29.1%	0	-	unknown(0)	-	-	NULL
FAM126A	84668	genome.wustl.edu	37	7	23030716	23030716	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032581.3	-1	reviewed	p.E5D	0.997	314	0%	283	24.4%	3	66.6%	benign(0)	tolerated(0.48)	neutral(0.011)	HMMPfam_Hyccin
NUPL2	11097	genome.wustl.edu	37	7	23240207	23240207	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007342.2	+1	validated	p.S372Y	0.087	166	0%	245	35.1%	51	29.4%	possibly_damaging(0.924)	deleterious(0.02)	deleterious(0.756)	NULL
IGF2BP3	10643	genome.wustl.edu	37	7	23383437	23383437	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006547.2	-1	reviewed	p.T326N	1.000	231	0%	327	34.9%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
IGF2BP3	10643	genome.wustl.edu	37	7	23387298	23387298	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006547.2	-1	reviewed	p.L247F	1.000	158	0%	295	33.2%	1	0%	benign(0)	tolerated(0.1)	neutral(0.286)	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
C7orf46	340277	genome.wustl.edu	37	7	23724210	23724210	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199136.3	+1	validated	p.R53I	1.000	195	0%	262	31.3%	2	50%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
STK31	56164	genome.wustl.edu	37	7	23768848	23768848	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031414.3	+1	reviewed	p.E155*	1.000	173	0%	203	36.9%	0	-	-	-	-	NULL
STK31	56164	genome.wustl.edu	37	7	23775303	23775303	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031414.3	+1	reviewed	p.E210D	1.000	152	0%	238	34.9%	0	-	probably_damaging(0.991)	tolerated(0.13)	deleterious(0.697)	NULL
STK31	56164	genome.wustl.edu	37	7	23802448	23802448	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031414.3	+1	reviewed	p.R441I	1.000	173	0.6%	255	32.2%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
STK31	56164	genome.wustl.edu	37	7	23826172	23826172	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031414.3	+1	reviewed	p.A774T	1.000	155	0%	121	32.2%	4	75%	probably_damaging(0.994)	deleterious(0.03)	deleterious(0.817)	HMMSmart_SM00220
OSBPL3	26031	genome.wustl.edu	37	7	24859814	24859814	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015550.2	-1	reviewed	p.R643I	0.124	166	0%	255	32.9%	11	63.6%	benign(0.001)	deleterious(0.05)	neutral(0.345)	HMMPfam_Oxysterol_BP
OSBPL3	26031	genome.wustl.edu	37	7	24901308	24901308	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015550.2	-1	reviewed	p.K317N	0.999	199	0%	295	29.8%	11	9%	possibly_damaging(0.515)	tolerated(0.28)	neutral(0.205)	NULL
OSBPL3	26031	genome.wustl.edu	37	7	24903219	24903219	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015550.2	-1	reviewed	e7-1	1.000	100	0%	146	30.1%	2	100%	-	-	-	-
HOXA3	3200	genome.wustl.edu	37	7	27147924	27147924	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030661.4	-1	reviewed	p.A314	0.869	17	0%	16	43.8%	1	0%	-	-	-	NULL
HOXA6	3203	genome.wustl.edu	37	7	27187135	27187135	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024014.2	-1	reviewed	p.C78	0.998	83	0%	89	40.4%	2	0%	-	-	-	NULL
HOXA11	3207	genome.wustl.edu	37	7	27224386	27224386	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005523.5	-1	reviewed	p.F126L	1.000	41	0%	40	30%	16	0%	possibly_damaging(0.662)	tolerated(0.13)	deleterious(0.487)	NULL
HIBADH	11112	genome.wustl.edu	37	7	27570855	27570855	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152740.2	-1	validated	p.A270T	0.997	149	0%	137	32.1%	17	17.6%	benign(0.047)	deleterious(0.04)	neutral(0.352)	superfamily_6-phosphogluconate dehydrogenase C-terminal domain-like
TAX1BP1	8887	genome.wustl.edu	37	7	27827194	27827194	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006024.5	+1	validated	p.R337I	1.000	98	0%	154	33.1%	68	41.1%	possibly_damaging(0.946)	deleterious(0)	deleterious(0.835)	HMMPfam_CALCOCO1
CREB5	9586	genome.wustl.edu	37	7	28858791	28858791	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182898.2	+1	reviewed	p.I474	1.000	170	0%	145	27.6%	2	50%	-	-	-	NULL
CHN2	1124	genome.wustl.edu	37	7	29394237	29394237	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000409964	+1	known	e1-2	0.996	112	0%	134	34.3%	0	-	-	-	-	-
CHN2	1124	genome.wustl.edu	37	7	29433323	29433323	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000409350	+1	known	p.E42*	1.000	83	0%	47	25.5%	0	-	-	-	-	NULL
SCRN1	9805	genome.wustl.edu	37	7	29980430	29980430	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145514.1	-1	reviewed	p.E223*	1.000	108	0%	157	34.4%	14	0%	-	-	-	NULL
PLEKHA8	84725	genome.wustl.edu	37	7	30090074	30090074	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032639.2	+1	provisional	p.H208N	1.000	145	0%	118	37.3%	7	28.5%	possibly_damaging(0.7)	tolerated(0.34)	neutral(0.275)	NULL
PLEKHA8	84725	genome.wustl.edu	37	7	30101579	30101579	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032639.2	+1	provisional	p.E389K	0.997	130	0%	145	31.7%	12	16.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_GLTP,superfamily_Glycolipid_transfer_prot
FAM188B	84182	genome.wustl.edu	37	7	30818144	30818144	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032222.2	+1	validated	p.E54*	0.183	155	0%	167	26.9%	3	100%	-	-	-	NULL
AQP1	358	genome.wustl.edu	37	7	30951578	30951578	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198098.2	+1	reviewed	p.F18L	1.000	43	0%	44	20.5%	14	0%	probably_damaging(0.993)	tolerated(0.29)	deleterious(0.479)	HMMPfam_MIP,superfamily_Aquaporin-like
CCDC129	223075	genome.wustl.edu	37	7	31682892	31682892	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194300.2	+1	validated	p.P636	0.000	105	0%	190	38.9%	0	-	-	-	-	NULL
CCDC129	223075	genome.wustl.edu	37	7	31692199	31692199	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194300.2	+1	validated	p.E964G	0.997	78	0%	125	32.8%	0	-	benign(0.002)	deleterious(0)	neutral(0.445)	NULL
PPP1R17	10842	genome.wustl.edu	37	7	31735209	31735209	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006658.3	+1	validated	p.A70V	0.814	139	0%	127	18.9%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PDE1C	5137	genome.wustl.edu	37	7	31887647	31887647	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005020.1	-1	provisional	p.A305	0.938	163	0%	102	32.4%	0	-	-	-	-	HMMPfam_PDEase_I,HMMSmart_HDc,superfamily_SSF109604
AVL9	23080	genome.wustl.edu	37	7	32582761	32582761	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015060.1	+1	provisional	p.F34L	1.000	157	0%	233	27.9%	7	57.1%	probably_damaging(0.972)	deleterious(0.01)	deleterious(0.820)	HMMPfam_Avl9
KBTBD2	25948	genome.wustl.edu	37	7	32910450	32910450	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015483.2	-1	validated	p.K127Q	1.000	52	0%	85	32.9%	5	80%	possibly_damaging(0.917)	deleterious(0.04)	deleterious(0.717)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
FKBP9	11328	genome.wustl.edu	37	7	33020089	33020089	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007270.3	+1	validated	p.R273W	1.000	139	0%	318	35.8%	103	35.9%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_FKBP_C,superfamily_SSF54534
BBS9	27241	genome.wustl.edu	37	7	33545174	33545174	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198428.2	+1	reviewed	p.A739T	0.090	123	0%	107	29%	14	35.7%	benign(0.004)	tolerated(0.11)	neutral(0.272)	NULL
BMPER	168667	genome.wustl.edu	37	7	34094877	34094877	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133468.3	+1	validated	p.D297Y	1.000	130	0%	121	40.5%	0	-	benign(0.049)	tolerated(0.51)	neutral(0.012)	NULL
DPY19L1	23333	genome.wustl.edu	37	7	34977697	34977697	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015283.1	-1	validated	p.R594W	1.000	287	0%	259	31.7%	12	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF2211
HERPUD2	64224	genome.wustl.edu	37	7	35674825	35674825	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000426180	-1	known	p.D187N	0.951	203	0%	241	34.9%	7	14.2%	-	-	-	NULL
AOAH	313	genome.wustl.edu	37	7	36661331	36661331	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001637.3	-1	reviewed	p.V213A	0.000	146	0%	125	34.4%	1	0%	benign(0.003)	tolerated(0.15)	neutral(0.241)	NULL
ELMO1	9844	genome.wustl.edu	37	7	37251016	37251016	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014800.9	-1	reviewed	p.R354Q	1.000	189	0%	228	27.2%	7	14.2%	benign(0.269)	tolerated(0.46)	neutral(0.041)	HMMPfam_ELMO_CED12
TXNDC3	51314	genome.wustl.edu	37	7	37901701	37901701	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016616.4	+1	reviewed	p.I114	0.000	161	0%	148	36.5%	0	-	-	-	-	superfamily_Thiordxn-like_fd
TXNDC3	51314	genome.wustl.edu	37	7	37916566	37916566	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016616.4	+1	reviewed	p.K317N	0.004	102	0%	82	42.7%	0	-	possibly_damaging(0.509)	deleterious(0.02)	deleterious(0.553)	HMMSmart_NDK,superfamily_NDK
TXNDC3	51314	genome.wustl.edu	37	7	37936563	37936563	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016616.4	+1	reviewed	p.L546V	0.000	145	0%	120	35%	2	100%	benign(0.001)	tolerated(0.74)	neutral(0.002)	HMMPfam_NDK,HMMSmart_NDK,superfamily_NDK
EPDR1	54749	genome.wustl.edu	37	7	37988465	37988465	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017549.3	+1	reviewed	p.Y218S	1.000	174	0%	243	32.5%	3	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Ependymin
TARP	445347	genome.wustl.edu	37	7	38299730	38299730	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003806.1	-1	reviewed	p.L99F	0.000	355	0%	639	18.3%	0	-	benign(0.08)	tolerated(1)	neutral(0.005)	NULL
TARP	445347	genome.wustl.edu	37	7	38305208	38305208	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003799.1	-1	reviewed	p.S20	0.001	213	0%	407	30.5%	0	-	benign(0.003)	tolerated(0.45)	neutral(0.012)	NULL
TRGV3	6976	genome.wustl.edu	37	7	38398389	38398389	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390346	-1	known	p.T26	0.000	174	0%	309	32%	1	0%	-	-	-	HMMPfam_V-set,superfamily_Immunoglobulin
TRGV2	6974	genome.wustl.edu	37	7	38402489	38402489	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000426402	-1	known	p.V110	0.469	169	0%	219	32.9%	0	-	-	-	-	HMMPfam_V-set,superfamily_SSF48726
AMPH	273	genome.wustl.edu	37	7	38502699	38502699	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001635.2	-1	reviewed	p.L255P	1.000	258	0%	305	34.8%	0	-	probably_damaging(0.985)	deleterious(0.02)	deleterious(0.815)	NULL
AMPH	273	genome.wustl.edu	37	7	38514956	38514956	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001635.2	-1	reviewed	p.E189*	1.000	319	0%	315	25.7%	0	-	-	-	-	HMMPfam_BAR,HMMSmart_SM00721
VPS41	27072	genome.wustl.edu	37	7	38937711	38937711	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014396.3	-1	reviewed	p.E14*	1.000	134	0%	149	28.9%	8	25%	-	-	-	NULL
POU6F2	11281	genome.wustl.edu	37	7	39247123	39247123	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007252.3	+1	reviewed	p.L139I	1.000	50	0%	59	20.3%	1	0%	unknown(0)	deleterious(0)	-	NULL
POU6F2	11281	genome.wustl.edu	37	7	39500252	39500252	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007252.3	+1	reviewed	p.T503	1.000	73	0%	75	37.3%	0	-	-	-	-	HMMPfam_Pou,HMMSmart_SM00352,PatternScan_POU_1,superfamily_lambda repressor-like DNA-binding domains
POU6F2	11281	genome.wustl.edu	37	7	39503941	39503941	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007252.3	+1	reviewed	p.L578F	1.000	154	0%	205	35.1%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pou,HMMSmart_SM00352,superfamily_lambda repressor-like DNA-binding domains
RALA	5898	genome.wustl.edu	37	7	39745743	39745743	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005402.2	+1	reviewed	p.E174*	1.000	164	0%	228	33.8%	81	51.8%	-	-	-	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
RALA	5898	genome.wustl.edu	37	7	39745749	39745749	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005402.2	+1	reviewed	p.R176*	1.000	171	0%	244	33.2%	82	37.8%	-	-	-	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
ENSG00000249078	0	genome.wustl.edu	37	7	39894033	39894033	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000507268	+1	known	NULL	0.780	162	0%	222	30.6%	5	0%	-	-	-	-
CDK13	8621	genome.wustl.edu	37	7	40027692	40027692	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003718.4	+1	reviewed	p.K569T	1.000	74	0%	162	32.1%	8	25%	possibly_damaging(0.666)	tolerated(0.14)	deleterious(0.485)	NULL
C7orf10	79783	genome.wustl.edu	37	7	40220597	40220597	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024728.1	+1	provisional	p.R58K	1.000	423	0%	571	26.4%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_CoA-Trfase_fam_III
GLI3	2737	genome.wustl.edu	37	7	42012080	42012080	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000168.5	-1	reviewed	p.P653	0.000	181	0%	170	32.4%	3	33.3%	-	-	-	NULL
GLI3	2737	genome.wustl.edu	37	7	42018306	42018306	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000168.5	-1	reviewed	p.F513	0.985	143	0%	155	25.2%	1	0%	-	-	-	HMMPfam_zf-C2H2,HMMSmart_SM00355
C7orf25	79020	genome.wustl.edu	37	7	42950227	42950227	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099858.1	-1	validated	p.V149	1.000	258	0%	383	28.5%	5	20%	-	-	-	HMMPfam_DUF1308
HECW1	23072	genome.wustl.edu	37	7	43360288	43360288	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015052.3	+1	validated	p.S136F	1.000	200	0%	380	11.1%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
C7orf44	55744	genome.wustl.edu	37	7	43684885	43684885	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018224.2	-1	validated	p.D77Y	0.014	91	0%	140	36.4%	38	47.3%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
URGCP	55665	genome.wustl.edu	37	7	43917456	43917456	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077663.1	-1	validated	p.R536*	0.027	58	0%	68	25%	10	50%	-	-	-	NULL
URGCP	55665	genome.wustl.edu	37	7	43917729	43917729	+	Missense_Mutation	SNP	G	G	A	rs146588529	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077663.1	-1	validated	p.R445W	0.041	104	0%	135	30.4%	17	70.5%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
POLM	27434	genome.wustl.edu	37	7	44116211	44116211	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000430942	-1	known	p.S239L	0.359	98	0%	105	41%	4	0%	unknown(0)	-	-	NULL
NUDCD3	23386	genome.wustl.edu	37	7	44444152	44444152	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015332.3	-1	reviewed	p.R225C	1.000	79	0%	130	20.8%	28	17.8%	benign(0.054)	tolerated(0.14)	neutral(0.253)	superfamily_HSP20_chap,HMMPfam_CS
NPC1L1	29881	genome.wustl.edu	37	7	44578618	44578618	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013389.2	-1	reviewed	p.E460K	0.056	155	0%	174	34.5%	0	-	benign(0)	tolerated(0.31)	neutral(0.027)	HMMPfam_Patched
OGDH	4967	genome.wustl.edu	37	7	44741208	44741208	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002541.3	+1	reviewed	p.L876F	1.000	157	0%	356	35.4%	44	34%	benign(0.394)	tolerated(0.09)	neutral(0.423)	NULL
NACAD	23148	genome.wustl.edu	37	7	45124587	45124587	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000258775	-1	known	p.E398*	0.999	37	0%	65	50.8%	0	-	-	-	-	NULL
TBRG4	9238	genome.wustl.edu	37	7	45141949	45141949	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004749.2	-1	validated	p.L440I	0.954	77	0%	111	27%	43	44.1%	probably_damaging(0.969)	deleterious(0.05)	deleterious(0.757)	NULL
TBRG4	9238	genome.wustl.edu	37	7	45148446	45148446	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004749.2	-1	validated	p.L131F	0.200	65	0%	126	39.7%	37	37.8%	benign(0.038)	tolerated(0.06)	neutral(0.325)	NULL
ADCY1	107	genome.wustl.edu	37	7	45748045	45748045	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021116.2	+1	reviewed	p.D972N	1.000	331	0%	441	35.6%	3	33.3%	benign(0.004)	tolerated(1)	-	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase
IGFBP3	3486	genome.wustl.edu	37	7	45956180	45956180	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000428530	-1	known	p.T91I	1.000	276	0%	273	34.8%	90	3.3%	-	-	-	HMMPfam_Thyroglobulin_1,HMMSmart_SM00211,PatternScan_THYROGLOBULIN_1_1,superfamily_Thyroglobulin type-1 domain
TNS3	64759	genome.wustl.edu	37	7	47336726	47336726	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022748.10	-1	validated	p.M1210I	1.000	58	0%	76	40.8%	15	6.6%	benign(0.008)	deleterious(0.03)	neutral(0.364)	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain
C7orf65	401335	genome.wustl.edu	37	7	47698695	47698695	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001123065.1	+1	validated	p.L109F	0.000	135	0%	174	31%	0	-	unknown(0)	-	-	NULL
PKD1L1	168507	genome.wustl.edu	37	7	47968883	47968883	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138295.2	-1	reviewed	p.F326	0.042	168	0%	347	33.4%	1	0%	-	-	-	NULL
HUS1	3364	genome.wustl.edu	37	7	48018179	48018179	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004507.2	-1	reviewed	p.F64L	1.000	169	0%	315	26.7%	7	71.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Hus1
SUN3	256979	genome.wustl.edu	37	7	48056936	48056936	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001030019.1	-1	validated	p.E71*	0.012	160	0%	174	28.7%	0	-	-	-	-	NULL
ABCA13	154664	genome.wustl.edu	37	7	48258983	48258983	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152701.3	+1	reviewed	p.K107R	0.000	63	0%	77	28.6%	0	-	benign(0)	-	-	NULL
ABCA13	154664	genome.wustl.edu	37	7	48269540	48269540	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152701.3	+1	reviewed	p.V251L	0.000	141	0%	157	39.5%	0	-	benign(0.401)	-	-	NULL
ABCA13	154664	genome.wustl.edu	37	7	48285141	48285141	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152701.3	+1	reviewed	p.D475Y	0.000	174	0%	228	29.8%	0	-	possibly_damaging(0.949)	-	-	NULL
ABCA13	154664	genome.wustl.edu	37	7	48315032	48315032	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152701.3	+1	reviewed	p.K1923N	0.000	63	0%	47	12.8%	0	-	probably_damaging(0.978)	-	-	NULL
ABCA13	154664	genome.wustl.edu	37	7	48428710	48428710	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000453246	+1	known	p.G115*	0.888	61	0%	90	37.8%	0	-	probably_damaging(1)	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCA13	154664	genome.wustl.edu	37	7	48528847	48528847	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000453246	+1	known	p.E665K	1.000	269	0%	243	34.6%	0	-	-	-	-	NULL
ABCA13	154664	genome.wustl.edu	37	7	48550753	48550753	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152701.3	+1	reviewed	p.R4533H	0.993	240	0%	261	22.6%	0	-	probably_damaging(0.999)	-	-	NULL
ABCA13	154664	genome.wustl.edu	37	7	48619944	48619944	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152701.3	+1	reviewed	p.G4827R	0.888	177	0%	145	25.5%	0	-	probably_damaging(1)	-	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCA13	154664	genome.wustl.edu	37	7	48684218	48684218	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152701.3	+1	reviewed	p.Q4983	0.996	55	0%	62	32.3%	0	-	-	-	-	NULL
ABCA13	154664	genome.wustl.edu	37	7	48685023	48685023	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152701.3	+1	reviewed	p.N5031T	0.996	203	0%	245	30.2%	0	-	benign(0.039)	-	-	NULL
ZPBP	11055	genome.wustl.edu	37	7	50057846	50057846	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007009.2	-1	validated	p.R258I	0.085	246	0%	179	31.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sp38
ZPBP	11055	genome.wustl.edu	37	7	50129253	50129253	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007009.2	-1	validated	p.V60	0.997	82	0%	58	34.5%	0	-	-	-	-	NULL
IKZF1	10320	genome.wustl.edu	37	7	50367274	50367274	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000331340	+1	known	p.G27	0.020	66	0%	96	33.3%	0	-	-	-	-	NULL
FIGNL1	63979	genome.wustl.edu	37	7	50513484	50513484	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042762.1	-1	validated	p.E501G	1.000	91	0%	121	40.5%	4	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00382,HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
FIGNL1	63979	genome.wustl.edu	37	7	50514088	50514088	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042762.1	-1	validated	p.E300*	1.000	260	0%	322	36%	0	-	-	-	-	NULL
GRB10	2887	genome.wustl.edu	37	7	50686909	50686909	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005311.4	-1	reviewed	p.F245	1.000	218	0.5%	255	34.1%	5	40%	-	-	-	HMMPfam_RA,HMMSmart_SM00314
COBL	23242	genome.wustl.edu	37	7	51096885	51096885	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000452534	-1	known	p.E612K	0.000	252	0.4%	348	66.4%	5	100%	-	-	-	NULL
POM121L12	285877	genome.wustl.edu	37	7	53103700	53103700	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182595.3	+1	validated	p.L112	0.001	29	0%	22	31.8%	0	-	-	-	-	NULL
VOPP1	81552	genome.wustl.edu	37	7	55540571	55540571	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030796.3	-1	validated	p.E166K	0.995	86	0%	129	15.5%	50	28%	benign(0.313)	deleterious(0.02)	deleterious(0.481)	NULL
SEPT14	346288	genome.wustl.edu	37	7	55872965	55872965	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207366.2	-1	validated	p.E369*	1.000	324	0%	538	38.1%	4	0%	-	-	-	NULL
SEPT14	346288	genome.wustl.edu	37	7	55872994	55872994	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207366.2	-1	validated	p.R359Q	0.675	318	0%	587	33.2%	7	100%	possibly_damaging(0.512)	deleterious(0.01)	deleterious(0.578)	NULL
LOC441228	441228	genome.wustl.edu	37	7	56358251	56358251	+	RNA	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_016387.3	+1	model	NULL	1.000	140	0%	224	36.6%	0	-	-	-	-	-
LOC100289196	100289196	genome.wustl.edu	37	7	56671199	56671199	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342722.1	+1	model	p.E33*	0.966	79	0%	77	27.3%	1	0%	-	-	-	NULL
ZNF479	90827	genome.wustl.edu	37	7	57187560	57187560	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033273.1	-1	provisional	p.Y521C	0.925	153	0%	149	30.2%	0	-	possibly_damaging(0.578)	deleterious(0)	deleterious(0.643)	superfamily_SSF57667
ZNF479	90827	genome.wustl.edu	37	7	57187652	57187652	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033273.1	-1	provisional	p.E490	1.000	133	0%	107	15.9%	0	-	-	-	-	superfamily_SSF57667
ZNF479	90827	genome.wustl.edu	37	7	57187836	57187836	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033273.1	-1	provisional	p.R429I	1.000	201	0%	249	27.3%	0	-	unknown(0)	tolerated(0.41)	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF479	90827	genome.wustl.edu	37	7	57188004	57188004	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033273.1	-1	provisional	p.R373I	0.592	118	0%	115	33%	0	-	benign(0.018)	tolerated(0.46)	neutral(0.013)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF479	90827	genome.wustl.edu	37	7	57188024	57188024	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033273.1	-1	provisional	p.S366	0.000	128	0%	104	29.8%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF479	90827	genome.wustl.edu	37	7	57188567	57188567	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033273.1	-1	provisional	p.F185	0.041	275	0%	334	32.6%	0	-	-	-	-	HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF716	441234	genome.wustl.edu	37	7	57522253	57522253	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342727.1	+1	model	p.D43Y	0.981	242	0%	255	27.8%	0	-	possibly_damaging(0.644)	deleterious(0)	deleterious(0.670)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF716	441234	genome.wustl.edu	37	7	57522857	57522857	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342727.1	+1	model	p.M82T	0.988	335	0%	330	26.7%	0	-	benign(0.004)	tolerated(0.96)	-	NULL
ZNF679	168417	genome.wustl.edu	37	7	63727100	63727100	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153363.2	+1	validated	p.F363L	0.000	105	0%	104	29.8%	0	-	benign(0)	tolerated(0.68)	neutral(0.002)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF736	728927	genome.wustl.edu	37	7	63809071	63809071	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000423484	+1	known	p.R277I	0.844	68	0%	72	27.8%	2	50%	benign(0.086)	tolerated(0.21)	neutral(0.050)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF680	340252	genome.wustl.edu	37	7	63982191	63982191	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178558.4	-1	validated	p.R314I	1.000	63	0%	85	22.4%	3	33.3%	benign(0.026)	tolerated(0.21)	neutral(0.045)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF107	51427	genome.wustl.edu	37	7	64167473	64167473	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013746.1	+1	validated	p.R264I	1.000	61	0%	61	27.9%	0	-	benign(0.079)	tolerated(0.17)	neutral(0.065)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF117	51351	genome.wustl.edu	37	7	64439756	64439756	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015852.3	-1	validated	p.D65Y	0.000	173	0%	110	30.9%	0	-	benign(0.002)	tolerated(0.28)	neutral(0.032)	NULL
ERV3-1	2086	genome.wustl.edu	37	7	64452930	64452930	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007253.3	-1	reviewed	p.D159N	0.163	111	0%	209	34.4%	4	100%	benign(0.024)	tolerated(0.4)	neutral(0.017)	NULL
ENSG00000207344	0	genome.wustl.edu	37	7	64526463	64526463	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000384614	+1	novel	NULL	0.995	17	0%	20	30%	0	-	-	-	-	-
ZNF92	168374	genome.wustl.edu	37	7	64864700	64864700	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152626.2	+1	validated	p.I558N	0.999	51	0%	34	29.4%	3	33.3%	benign(0.111)	deleterious(0.02)	neutral(0.392)	superfamily_C2H2 and C2HC zinc fingers
GUSB	2990	genome.wustl.edu	37	7	65425946	65425946	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000181.3	-1	reviewed	p.E632*	1.000	93	0%	239	31%	178	35.3%	-	-	-	superfamily_(Trans)glycosidases
POM121	9883	genome.wustl.edu	37	7	72413281	72413281	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172020.1	+1	reviewed	p.D652N	0.432	135	0%	255	20.4%	11	0%	benign(0.002)	tolerated(1)	-	NULL
POM121	9883	genome.wustl.edu	37	7	72416679	72416679	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172020.1	+1	reviewed	p.S954L	0.494	223	0.4%	358	31.8%	13	15.3%	benign(0.149)	deleterious(0)	neutral(0.458)	NULL
NSUN5	55695	genome.wustl.edu	37	7	72719090	72719090	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148956.2	-1	reviewed	p.D169N	0.077	158	0%	289	31.5%	39	56.4%	benign(0)	tolerated(0.46)	neutral(0.012)	superfamily_SSF53335
TRIM50	135892	genome.wustl.edu	37	7	72727296	72727296	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178125.2	-1	provisional	p.R362H	0.995	28	0%	14	35.7%	0	-	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	HMMPfam_SPRY,HMMSmart_SM00449
MLXIPL	51085	genome.wustl.edu	37	7	73010717	73010717	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032951.2	-1	reviewed	p.R639W	1.000	24	0%	55	23.6%	0	-	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	NULL
ELN	2006	genome.wustl.edu	37	7	73456948	73456948	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000501.2	+1	reviewed	p.L79	0.040	57	0%	72	34.7%	4	0%	-	-	-	NULL
ELN	2006	genome.wustl.edu	37	7	73470762	73470762	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000501.2	+1	reviewed	p.S438A	0.009	188	0%	330	30.6%	12	8.3%	unknown(0)	tolerated(0.38)	-	NULL
LIMK1	3984	genome.wustl.edu	37	7	73535360	73535360	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002314.2	+1	reviewed	p.D588N	1.000	65	0%	117	33.3%	60	35%	probably_damaging(0.995)	tolerated(0.2)	deleterious(0.507)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
CLIP2	7461	genome.wustl.edu	37	7	73790288	73790288	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003388.4	+1	reviewed	p.I519	0.975	10	0%	12	33.3%	10	0%	-	-	-	NULL
NCF1	653361	genome.wustl.edu	37	7	74197281	74197281	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000265.4	+1	reviewed	e6-1	1.000	123	0%	267	25.8%	0	-	-	-	-	-
GTF2IRD2	84163	genome.wustl.edu	37	7	74211844	74211844	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173537.2	-1	validated	p.H669	0.997	46	0%	136	30.9%	2	0%	-	-	-	NULL
WBSCR16	81554	genome.wustl.edu	37	7	74470146	74470146	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030798.3	-1	reviewed	p.L365F	1.000	69	0%	170	30%	21	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_RCC1/BLIP-II
WBSCR16	81554	genome.wustl.edu	37	7	74480411	74480411	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030798.3	-1	reviewed	p.E212K	0.485	110	0%	294	33%	19	36.8%	possibly_damaging(0.675)	tolerated(0.18)	neutral(0.295)	superfamily_RCC1/BLIP-II
WBSCR16	81554	genome.wustl.edu	37	7	74480440	74480440	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030798.3	-1	reviewed	p.S202Y	0.723	109	0%	285	31.6%	22	36.3%	possibly_damaging(0.873)	deleterious(0)	deleterious(0.784)	superfamily_RCC1/BLIP-II
GTF2IRD2B	389524	genome.wustl.edu	37	7	74564706	74564706	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003795.2	+1	reviewed	p.D818G	0.995	137	0%	374	23.8%	0	-	possibly_damaging(0.798)	tolerated(0.26)	neutral(0.335)	NULL
POM121C	100101267	genome.wustl.edu	37	7	75051183	75051183	+	Silent	SNP	G	G	A	rs190500891	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099415.1	-1	validated	p.F784	0.001	34	0%	41	39%	28	46.4%	-	-	-	NULL
POM121C	100101267	genome.wustl.edu	37	7	75051835	75051835	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099415.1	-1	validated	p.S567L	0.003	203	0%	322	17.7%	13	7.6%	benign(0.048)	tolerated(0.28)	neutral(0.035)	NULL
HIP1	3092	genome.wustl.edu	37	7	75185447	75185447	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005338.4	-1	reviewed	p.F570	0.000	55	0%	99	34.3%	0	-	-	-	-	NULL
ZP3	7784	genome.wustl.edu	37	7	76069798	76069798	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000394860	+1	known	p.S144F	0.210	109	0%	206	35.4%	11	0%	-	-	-	NULL
LOC100288807	100288807	genome.wustl.edu	37	7	76163229	76163229	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342739.1	-1	model	p.S544	0.004	150	0%	231	42.9%	1	0%	-	-	-	NULL
FGL2	10875	genome.wustl.edu	37	7	76825985	76825985	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006682.2	-1	reviewed	p.E311K	0.994	242	0.4%	295	28.8%	4	0%	benign(0)	tolerated(1)	-	HMMPfam_Fibrinogen_C,HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like
FGL2	10875	genome.wustl.edu	37	7	76828827	76828827	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006682.2	-1	reviewed	p.S95Y	0.647	150	0%	203	39.9%	1	0%	benign(0.264)	deleterious(0.01)	neutral(0.433)	NULL
CCDC146	57639	genome.wustl.edu	37	7	76908354	76908354	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020879.2	+1	validated	p.E544*	1.000	135	0%	158	36.7%	3	0%	-	-	-	NULL
PTPN12	5782	genome.wustl.edu	37	7	77200464	77200464	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002835.3	+1	reviewed	p.E57*	1.000	135	0%	159	29.6%	8	25%	-	-	-	HMMSmart_PTPc,superfamily_SSF52799
PTPN12	5782	genome.wustl.edu	37	7	77200478	77200478	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002835.3	+1	reviewed	p.K61N	1.000	121	0%	158	34.8%	9	33.3%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
PTPN12	5782	genome.wustl.edu	37	7	77240121	77240121	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002835.3	+1	reviewed	p.E268*	1.000	71	0%	41	22%	15	20%	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
PTPN12	5782	genome.wustl.edu	37	7	77256291	77256291	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002835.3	+1	reviewed	p.R432Q	1.000	63	0%	76	25%	13	38.4%	benign(0.249)	deleterious(0.01)	neutral(0.431)	NULL
PHTF2	57157	genome.wustl.edu	37	7	77538252	77538252	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127357.1	+1	validated	p.L162	0.314	105	0%	173	39.9%	3	33.3%	-	-	-	NULL
PHTF2	57157	genome.wustl.edu	37	7	77549611	77549611	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127357.1	+1	validated	p.K230N	0.990	69	0%	125	25.6%	3	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MAGI2	9863	genome.wustl.edu	37	7	77708379	77708379	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012301.3	-1	reviewed	p.I1197	1.000	328	0%	502	28.7%	0	-	-	-	-	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
MAGI2	9863	genome.wustl.edu	37	7	77830501	77830501	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012301.3	-1	reviewed	p.S686Y	1.000	48	0%	36	16.7%	0	-	possibly_damaging(0.931)	deleterious(0.02)	deleterious(0.760)	NULL
MAGI2	9863	genome.wustl.edu	37	7	77973155	77973155	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012301.3	-1	reviewed	p.L450M	1.000	249	0%	341	32.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
MAGI2	9863	genome.wustl.edu	37	7	78636480	78636480	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012301.3	-1	reviewed	p.R115Q	1.000	211	0%	182	31.9%	0	-	probably_damaging(1)	tolerated(0.63)	deleterious(0.503)	HMMSmart_SM00072
GNAI1	2770	genome.wustl.edu	37	7	79846806	79846806	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002069.5	+1	validated	p.F354L	1.000	153	0%	141	39%	13	46.1%	benign(0)	tolerated(0.41)	neutral(0.015)	NULL
GNAT3	346562	genome.wustl.edu	37	7	80088144	80088144	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102386.1	-1	provisional	p.I303T	1.000	171	0%	165	28.5%	0	-	probably_damaging(0.984)	deleterious(0.01)	deleterious(0.836)	HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
CD36	948	genome.wustl.edu	37	7	80302680	80302680	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000072.3	+1	reviewed	p.K403N	0.004	87	0%	66	39.4%	13	0%	benign(0.002)	tolerated(0.38)	neutral(0.018)	HMMPfam_CD36
HGF	3082	genome.wustl.edu	37	7	81346626	81346626	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000601.4	-1	reviewed	p.P443T	1.000	257	0%	234	31.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kringle,HMMSmart_SM00130,superfamily_Kringle-like,PatternScan_KRINGLE_1
HGF	3082	genome.wustl.edu	37	7	81350155	81350155	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000601.4	-1	reviewed	p.R393C	1.000	231	0%	277	32.9%	1	0%	possibly_damaging(0.841)	tolerated(0.17)	neutral(0.381)	HMMPfam_Kringle,HMMSmart_SM00130,superfamily_Kringle-like
HGF	3082	genome.wustl.edu	37	7	81392026	81392026	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000601.4	-1	reviewed	p.C84F	1.000	332	0%	335	27.5%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PAN_1,HMMSmart_SM00473,superfamily_Hairpin loop containing domain-like
CACNA2D1	781	genome.wustl.edu	37	7	81765991	81765991	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000722.2	-1	reviewed	p.S119I	1.000	127	0%	131	34.4%	1	0%	benign(0.004)	tolerated(0.19)	neutral(0.050)	HMMPfam_VWA_N
PCLO	27445	genome.wustl.edu	37	7	82390017	82390017	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033026.5	-1	validated	p.R5076*	1.000	267	0%	112	34.8%	0	-	-	-	-	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
PCLO	27445	genome.wustl.edu	37	7	82544693	82544693	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033026.5	-1	validated	p.F4203L	1.000	168	0%	180	37.2%	3	66.6%	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	NULL
PCLO	27445	genome.wustl.edu	37	7	82579135	82579135	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033026.5	-1	validated	p.K3590T	1.000	359	0%	479	33.8%	2	100%	probably_damaging(0.995)	-	-	NULL
PCLO	27445	genome.wustl.edu	37	7	82582261	82582261	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033026.5	-1	validated	p.L2670I	0.003	121	0%	116	36.2%	2	50%	benign(0.004)	-	-	NULL
PCLO	27445	genome.wustl.edu	37	7	82584401	82584401	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033026.5	-1	validated	p.I1956M	1.000	95	0%	115	34.8%	0	-	probably_damaging(0.991)	-	-	NULL
PCLO	27445	genome.wustl.edu	37	7	82584994	82584994	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033026.5	-1	validated	p.R1759W	0.966	95	0%	91	35.2%	0	-	probably_damaging(1)	-	-	NULL
KIAA1324L	222223	genome.wustl.edu	37	7	86577145	86577145	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142749.2	-1	validated	p.K135T	1.000	186	0%	227	30.4%	1	0%	possibly_damaging(0.923)	deleterious(0.03)	deleterious(0.737)	superfamily_Growth factor receptor domain
DMTF1	9988	genome.wustl.edu	37	7	86808912	86808912	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142327.1	+1	reviewed	p.E191K	1.000	152	0%	131	29%	5	60%	probably_damaging(0.993)	tolerated(0.2)	deleterious(0.499)	NULL
DMTF1	9988	genome.wustl.edu	37	7	86815237	86815237	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142327.1	+1	reviewed	p.R381Q	1.000	308	0%	327	32.4%	10	20%	probably_damaging(0.992)	tolerated(0.12)	deleterious(0.708)	HMMSmart_SM00717
CROT	54677	genome.wustl.edu	37	7	87004969	87004969	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143935.1	+1	reviewed	p.K254N	0.648	113	0%	163	29.4%	6	50%	benign(0.001)	tolerated(0.54)	neutral(0.007)	HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases
CROT	54677	genome.wustl.edu	37	7	87005203	87005203	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143935.1	+1	reviewed	p.Q298H	1.000	162	0%	140	30.7%	1	0%	possibly_damaging(0.93)	deleterious(0)	deleterious(0.821)	HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases
ABCB4	5244	genome.wustl.edu	37	7	87035619	87035619	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018849.2	-1	reviewed	p.I1164	0.767	158	0%	179	32.4%	0	-	-	-	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCB4	5244	genome.wustl.edu	37	7	87035793	87035793	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018849.2	-1	reviewed	p.E1106D	0.692	151	0%	181	31.5%	0	-	benign(0)	tolerated(1)	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
RUNDC3B	154661	genome.wustl.edu	37	7	87407141	87407141	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138290.2	+1	validated	p.R293*	1.000	97	0%	108	25%	1	0%	-	-	-	NULL
ADAM22	53616	genome.wustl.edu	37	7	87810852	87810852	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021723.2	+1	reviewed	p.R814M	1.000	202	0%	156	30.1%	1	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
STEAP4	79689	genome.wustl.edu	37	7	87913516	87913516	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024636.2	-1	validated	p.C23	0.913	76	0%	68	32.4%	0	-	-	-	-	HMMPfam_F420_oxidored,superfamily_NAD(P)-binding Rossmann-fold domains
ZNF804B	219578	genome.wustl.edu	37	7	88956756	88956756	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181646.2	+1	provisional	p.H116	1.000	166	0%	100	27%	0	-	-	-	-	NULL
ZNF804B	219578	genome.wustl.edu	37	7	88964559	88964559	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181646.2	+1	provisional	p.R755W	0.000	96	0%	61	34.4%	0	-	benign(0)	tolerated(0.08)	neutral(0.300)	NULL
ZNF804B	219578	genome.wustl.edu	37	7	88965007	88965007	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181646.2	+1	provisional	p.S904F	0.000	88	0%	50	20%	0	-	possibly_damaging(0.861)	deleterious(0)	deleterious(0.778)	NULL
ZNF804B	219578	genome.wustl.edu	37	7	88965588	88965588	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181646.2	+1	provisional	p.L1098I	0.018	92	0%	80	27.5%	0	-	probably_damaging(0.959)	tolerated(0.09)	deleterious(0.699)	NULL
C7orf63	79846	genome.wustl.edu	37	7	89909144	89909144	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039706.2	+1	validated	p.E437*	0.978	154	0%	189	30.2%	2	50%	-	-	-	superfamily_ARM-type_fold
C7orf63	79846	genome.wustl.edu	37	7	89915627	89915627	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039706.2	+1	validated	p.E524*	0.983	231	0%	96	24%	2	0%	-	-	-	superfamily_ARM-type_fold
C7orf63	79846	genome.wustl.edu	37	7	89939544	89939544	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039706.2	+1	validated	p.P894T	0.001	91	0%	96	33.3%	2	0%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
GTPBP10	85865	genome.wustl.edu	37	7	90012388	90012388	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033107.2	+1	validated	p.P299L	1.000	118	0%	124	39.5%	6	33.3%	probably_damaging(1)	tolerated(1)	deleterious(0.500)	superfamily_P-loop containing nucleoside triphosphate hydrolases
AKAP9	10142	genome.wustl.edu	37	7	91603044	91603044	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005751.4	+1	reviewed	p.R23I	1.000	37	0%	65	26.2%	0	-	possibly_damaging(0.604)	deleterious(0)	deleterious(0.654)	NULL
AKAP9	10142	genome.wustl.edu	37	7	91625058	91625058	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005751.4	+1	reviewed	p.E292*	1.000	129	0%	167	34.7%	0	-	-	-	-	NULL
AKAP9	10142	genome.wustl.edu	37	7	91632209	91632209	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005751.4	+1	reviewed	p.R993K	0.985	83	0%	111	32.4%	1	0%	benign(0)	tolerated(0.42)	neutral(0.014)	NULL
AKAP9	10142	genome.wustl.edu	37	7	91652199	91652199	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005751.4	+1	reviewed	p.E1342*	0.992	82	0%	111	36.9%	1	100%	-	-	-	NULL
AKAP9	10142	genome.wustl.edu	37	7	91691743	91691743	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005751.4	+1	reviewed	p.E1974*	1.000	109	0%	131	33.6%	0	-	-	-	-	NULL
AKAP9	10142	genome.wustl.edu	37	7	91694548	91694548	+	Nonsense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005751.4	+1	reviewed	p.L1994*	1.000	87	0%	108	33.3%	0	-	-	-	-	NULL
AKAP9	10142	genome.wustl.edu	37	7	91709328	91709328	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005751.4	+1	reviewed	p.E2627	0.967	57	0%	64	31.2%	0	-	-	-	-	NULL
AKAP9	10142	genome.wustl.edu	37	7	91726195	91726195	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005751.4	+1	reviewed	p.R3308*	0.998	92	0%	204	30.4%	3	33.3%	-	-	-	NULL
ENSG00000240720	0	genome.wustl.edu	37	7	91793375	91793375	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000430130	-1	known	p.K381T	0.997	52	0%	58	32.8%	0	-	possibly_damaging(0.818)	tolerated(0.51)	neutral(0.318)	HMMSmart_SM00369,superfamily_L domain-like
SAMD9	54809	genome.wustl.edu	37	7	92733821	92733821	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017654.2	-1	validated	p.H530	0.004	121	0%	138	30.4%	0	-	-	-	-	NULL
SAMD9L	219285	genome.wustl.edu	37	7	92760782	92760782	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152703.2	-1	validated	p.Q1501H	0.000	178	0%	168	34.5%	2	0%	benign(0)	deleterious(0.05)	neutral(0.345)	NULL
SAMD9L	219285	genome.wustl.edu	37	7	92761001	92761001	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152703.2	-1	validated	p.F1428L	0.996	123	0%	108	28.7%	5	0%	possibly_damaging(0.94)	tolerated(0.14)	deleterious(0.635)	NULL
SAMD9L	219285	genome.wustl.edu	37	7	92761345	92761345	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152703.2	-1	validated	p.L1314I	0.000	132	0%	103	31.1%	1	0%	benign(0.015)	tolerated(0.33)	neutral(0.025)	NULL
HEPACAM2	253012	genome.wustl.edu	37	7	92826705	92826705	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039372.1	-1	provisional	p.K382Q	0.998	144	0%	59	37.3%	0	-	benign(0)	deleterious(0.05)	neutral(0.345)	NULL
HEPACAM2	253012	genome.wustl.edu	37	7	92848439	92848439	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039372.1	-1	provisional	p.S135	0.997	174	0%	185	40%	0	-	-	-	-	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
CCDC132	55610	genome.wustl.edu	37	7	92881984	92881984	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017667.2	+1	validated	p.R41*	1.000	163	0%	141	40.4%	0	-	-	-	-	NULL
CCDC132	55610	genome.wustl.edu	37	7	92932792	92932792	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000458707	+1	known	p.E248*	1.000	170	0%	147	32%	4	25%	possibly_damaging(0.677)	tolerated(0.06)	deleterious(0.564)	NULL
CCDC132	55610	genome.wustl.edu	37	7	92983058	92983058	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017667.2	+1	validated	p.R857Q	1.000	205	0%	165	29.1%	5	80%	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	HMMPfam_DUF2451
CALCR	799	genome.wustl.edu	37	7	93108753	93108753	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001742.3	-1	reviewed	p.L40I	0.005	352	0%	290	31.7%	0	-	possibly_damaging(0.772)	deleterious(0.03)	deleterious(0.651)	superfamily_SSF111418
MIR653	724023	genome.wustl.edu	37	7	93112147	93112147	+	RNA	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000385279	-1	known	NULL	1.000	155	0%	89	42.7%	0	-	-	-	-	-
TFPI2	7980	genome.wustl.edu	37	7	93518399	93518399	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006528.2	-1	provisional	p.E136D	0.003	127	0%	153	35.9%	101	37.6%	possibly_damaging(0.649)	tolerated(0.42)	neutral(0.242)	HMMPfam_Kunitz_BPTI,HMMSmart_KU,superfamily_Prot_inh_Kunz-m
PEG10	23089	genome.wustl.edu	37	7	94293191	94293191	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040152.1	+1	reviewed	p.T108I	0.994	118	0%	141	30.5%	17	100%	probably_damaging(0.963)	deleterious(0.04)	deleterious(0.754)	NULL
PPP1R9A	55607	genome.wustl.edu	37	7	94539977	94539977	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017650.2	+1	validated	p.S184	0.984	117	0%	163	35%	1	100%	-	-	-	NULL
PPP1R9A	55607	genome.wustl.edu	37	7	94881345	94881345	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017650.2	+1	validated	p.I834	0.998	206	0%	155	34.2%	2	0%	-	-	-	NULL
PPP1R9A	55607	genome.wustl.edu	37	7	94919405	94919405	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017650.2	+1	validated	p.A1029	0.998	99	0%	202	35.1%	0	-	-	-	-	HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2
PON1	5444	genome.wustl.edu	37	7	94931535	94931535	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000446.5	-1	reviewed	p.E297D	0.727	140	0%	169	34.3%	0	-	benign(0)	tolerated(0.4)	neutral(0.016)	superfamily_Calcium-dependent phosphotriesterase
ASB4	51666	genome.wustl.edu	37	7	95115339	95115339	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016116.1	+1	reviewed	p.R19I	0.535	173	0%	199	28.6%	0	-	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
PDK4	5166	genome.wustl.edu	37	7	95216809	95216809	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002612.3	-1	reviewed	p.R301I	1.000	133	0%	163	39.9%	6	16.6%	possibly_damaging(0.834)	deleterious(0.01)	deleterious(0.724)	HMMPfam_HATPase_c,HMMSmart_SM00387,superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SLC25A13	10165	genome.wustl.edu	37	7	95820524	95820524	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014251.2	-1	reviewed	p.F217L	1.000	188	0%	247	32.4%	15	66.6%	possibly_damaging(0.786)	deleterious(0.01)	deleterious(0.700)	superfamily_SSF47473
SLC25A13	10165	genome.wustl.edu	37	7	95864213	95864213	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014251.2	-1	reviewed	p.E77*	1.000	171	0%	221	32.1%	5	0%	-	-	-	HMMSmart_EFh,superfamily_SSF47473
OCM2	4951	genome.wustl.edu	37	7	97617787	97617787	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006188.3	-1	reviewed	p.K45N	0.996	194	0%	408	32.4%	0	-	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	HMMSmart_EFh,HMMPfam_efhand,superfamily_SSF47473
BHLHA15	168620	genome.wustl.edu	37	7	97841794	97841794	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177455.3	+1	validated	p.R58H	0.175	5	0.000	12	0.417	0	-	probably_damaging(0.989)	deleterious(0.01)	deleterious(0.845)	NULL
TECPR1	25851	genome.wustl.edu	37	7	97857397	97857397	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015395.1	-1	provisional	p.T814	0.071	111	0%	260	30%	10	40%	-	-	-	NULL
TRRAP	8295	genome.wustl.edu	37	7	98508891	98508891	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000456197	+1	known	p.F383C	0.999	166	0%	252	25.8%	5	20%	-	-	-	NULL
TRRAP	8295	genome.wustl.edu	37	7	98546259	98546259	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003496.2	+1	validated	p.F1555C	1.000	92	0%	146	38.4%	4	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_ARM repeat
TRRAP	8295	genome.wustl.edu	37	7	98581838	98581838	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003496.2	+1	validated	p.L3024	0.921	123	0%	273	34.8%	12	33.3%	-	-	-	HMMPfam_FAT,superfamily_ARM repeat,superfamily_Protein prenylyltransferase,superfamily_TPR-like
TRRAP	8295	genome.wustl.edu	37	7	98581897	98581897	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000456197	+1	known	p.S2783L	0.746	102	0%	190	33.7%	15	46.6%	-	-	-	HMMPfam_FAT,superfamily_ARM repeat,superfamily_Protein prenylyltransferase,superfamily_TPR-like
TRRAP	8295	genome.wustl.edu	37	7	98601886	98601886	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000456197	+1	known	p.S3176Y	0.959	121	0%	126	31.7%	13	61.5%	-	-	-	superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat
SMURF1	57154	genome.wustl.edu	37	7	98645408	98645408	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020429.1	-1	reviewed	p.D377Y	1.000	93	0%	139	19.4%	11	36.3%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	NULL
ARPC1A	10552	genome.wustl.edu	37	7	98961204	98961204	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006409.2	+1	reviewed	p.R341H	1.000	197	0.5%	505	37%	209	37.7%	benign(0.014)	tolerated(0.13)	neutral(0.253)	HMMSmart_SM00320,superfamily_WD40 repeat-like
ARPC1B	10095	genome.wustl.edu	37	7	98988604	98988604	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005720.2	+1	reviewed	p.E197K	1.000	32	0%	49	30.6%	117	5.1%	possibly_damaging(0.616)	deleterious(0.03)	deleterious(0.579)	HMMSmart_SM00320,superfamily_WD40 repeat-like
ATP5J2	9551	genome.wustl.edu	37	7	99057758	99057758	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004889.2	-1	reviewed	p.I30	0.050	111	0%	202	28.7%	488	37.7%	-	-	-	HMMPfam_WRW
ZNF789	285989	genome.wustl.edu	37	7	99084663	99084663	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_213603.2	+1	validated	p.R277M	0.681	68	0%	161	30.4%	5	0%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZKSCAN5	23660	genome.wustl.edu	37	7	99103737	99103737	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014569.3	+1	reviewed	p.D24Y	0.795	65	0%	156	39.1%	1	100%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
ZKSCAN5	23660	genome.wustl.edu	37	7	99123772	99123772	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014569.3	+1	reviewed	p.G370E	1.000	40	0%	70	44.3%	7	14.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_C2H2 and C2HC zinc fingers
FAM200A	221786	genome.wustl.edu	37	7	99144588	99144588	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145111.2	-1	validated	p.S481	1.000	63	0%	114	33.3%	5	60%	-	-	-	NULL
ZNF498	221785	genome.wustl.edu	37	7	99227017	99227017	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145115.2	+1	validated	p.E337K	0.571	42	0%	63	25.4%	4	50%	benign(0.018)	tolerated(0.85)	neutral(0.001)	NULL
CYP3A5	1577	genome.wustl.edu	37	7	99250280	99250280	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000777.2	-1	reviewed	p.I383	0.904	267	0%	287	30.7%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
CYP3A5	1577	genome.wustl.edu	37	7	99264270	99264270	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000777.2	-1	reviewed	p.N159H	0.042	291	0%	352	29.5%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_p450,superfamily_Cytochrome P450
CYP3A4	1576	genome.wustl.edu	37	7	99361562	99361562	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017460.3	-1	reviewed	p.L314	0.589	189	0%	200	36%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
CYP3A4	1576	genome.wustl.edu	37	7	99364822	99364822	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017460.3	-1	reviewed	p.E244*	0.000	335	0%	337	33.8%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
CYP3A4	1576	genome.wustl.edu	37	7	99367804	99367804	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017460.3	-1	reviewed	p.E125K	0.005	349	0%	398	35.2%	0	-	benign(0.001)	tolerated(0.12)	neutral(0.261)	HMMPfam_p450,superfamily_Cytochrome P450
CYP3A43	64816	genome.wustl.edu	37	7	99436746	99436746	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022820.3	+1	reviewed	p.L57F	0.000	357	0.3%	491	31.6%	0	-	benign(0.017)	tolerated(0.48)	neutral(0.011)	HMMPfam_p450,superfamily_Cytochrome P450
OR2AE1	81392	genome.wustl.edu	37	7	99474390	99474390	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005276.1	-1	provisional	p.K89N	0.002	50	0%	156	32.1%	0	-	benign(0.167)	tolerated(0.58)	neutral(0.020)	HMMPfam_7tm_1,superfamily_SSF81321
TRIM4	89122	genome.wustl.edu	37	7	99490015	99490015	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033017.2	-1	reviewed	p.G425D	0.037	83	0%	130	30%	4	0%	possibly_damaging(0.736)	tolerated(0.65)	neutral(0.272)	HMMPfam_SPRY,HMMSmart_SM00449
AZGP1	563	genome.wustl.edu	37	7	99569409	99569409	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001185.3	-1	validated	p.E99D	0.978	170	0%	375	62.7%	0	-	benign(0.055)	tolerated(0.27)	neutral(0.037)	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain
COPS6	10980	genome.wustl.edu	37	7	99688570	99688570	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006833.4	+1	reviewed	p.E178*	1.000	236	0.4%	508	35.2%	90	2.2%	-	-	-	NULL
COPS6	10980	genome.wustl.edu	37	7	99688765	99688765	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006833.4	+1	reviewed	p.E213D	1.000	117	0%	262	39.7%	137	40.1%	benign(0.003)	tolerated(0.31)	neutral(0.027)	NULL
MCM7	4176	genome.wustl.edu	37	7	99693651	99693651	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005916.3	-1	reviewed	p.F447	1.000	44	0%	108	46.3%	255	54.9%	-	-	-	HMMPfam_MCM,HMMSmart_SM00350,HMMSmart_SM00382,PatternScan_MCM_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
C7orf43	55262	genome.wustl.edu	37	7	99753042	99753042	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018275.3	-1	predicted	p.A478T	0.975	39	0%	88	29.5%	34	38.2%	probably_damaging(0.998)	tolerated(0.19)	deleterious(0.524)	NULL
GAL3ST4	79690	genome.wustl.edu	37	7	99764312	99764312	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024637.4	-1	reviewed	p.S81Y	1.000	53	0%	127	29.1%	2	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Gal-3-0_sulfotr
STAG3	10734	genome.wustl.edu	37	7	99809080	99809080	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012447.2	+1	validated	p.E1145K	0.013	110	0%	246	37.8%	0	-	benign(0.001)	tolerated(0.1)	neutral(0.286)	superfamily_ARM repeat
SPDYE3	441272	genome.wustl.edu	37	7	99909547	99909547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000332397	+1	known	p.S240L	0.022	89	0%	195	23.6%	1	0%	unknown(0)	deleterious(0)	-	NULL
FBXO24	26261	genome.wustl.edu	37	7	100187909	100187909	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033506.2	+1	reviewed	p.R84H	1.000	44	0%	61	32.8%	1	0%	benign(0.001)	tolerated(0.23)	neutral(0.042)	HMMPfam_F-box,superfamily_F-box domain
ACTL6B	51412	genome.wustl.edu	37	7	100244667	100244667	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016188.4	-1	reviewed	p.N288S	1.000	59	0%	89	34.8%	0	-	benign(0.022)	deleterious(0.04)	neutral(0.350)	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067
GNB2	2783	genome.wustl.edu	37	7	100274167	100274167	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005273.3	+1	reviewed	p.K23Q	1.000	59	0%	120	32.5%	242	43.8%	benign(0.005)	tolerated(0.16)	neutral(0.059)	superfamily_WD40 repeat-like
ZAN	7455	genome.wustl.edu	37	7	100333378	100333378	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003386.1	+1	reviewed	p.R30H	0.000	51	0%	125	68%	0	-	benign(0.293)	-	-	NULL
ZAN	7455	genome.wustl.edu	37	7	100349493	100349493	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003386.1	+1	reviewed	p.E589K	0.000	405	0%	868	30.6%	0	-	unknown(0)	-	-	NULL
EPHB4	2050	genome.wustl.edu	37	7	100404063	100404063	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004444.4	-1	reviewed	p.Y821	1.000	100	0%	302	36.8%	152	37.5%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
EPHB4	2050	genome.wustl.edu	37	7	100410757	100410757	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004444.4	-1	reviewed	p.I610	0.973	200	0%	460	31.5%	92	42.3%	-	-	-	superfamily_Protein kinase-like (PK-like)
EPHB4	2050	genome.wustl.edu	37	7	100421318	100421318	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004444.4	-1	reviewed	p.A120V	0.952	17	0%	24	45.8%	60	50%	benign(0.004)	tolerated(0.51)	neutral(0.009)	HMMPfam_Ephrin_lbd,HMMSmart_SM00615,superfamily_Galactose-binding domain-like
ACHE	43	genome.wustl.edu	37	7	100490363	100490363	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015831.2	-1	reviewed	p.E382A	1.000	16	0%	41	39%	2	50%	possibly_damaging(0.77)	tolerated(0.08)	deleterious(0.586)	HMMPfam_COesterase,superfamily_SSF53474
MUC12	10071	genome.wustl.edu	37	7	100639230	100639230	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000379442	+1	known	p.E1939*	0.001	125	0%	253	34.8%	0	-	-	-	-	NULL
MUC12	10071	genome.wustl.edu	37	7	100644583	100644583	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000379442	+1	known	p.S3723I	0.001	1073	0%	2156	11.8%	0	-	unknown(0)	-	-	NULL
MUC12	10071	genome.wustl.edu	37	7	100646659	100646659	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000379442	+1	known	p.S4415F	0.002	923	0%	1839	17.9%	0	-	possibly_damaging(0.922)	-	-	NULL
MUC12	10071	genome.wustl.edu	37	7	100647729	100647729	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000379442	+1	known	p.E4772*	0.003	328	0%	593	34.6%	0	-	-	-	-	NULL
MUC12	10071	genome.wustl.edu	37	7	100648305	100648305	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000379442	+1	known	p.E4964*	0.005	308	0%	576	34.2%	0	-	-	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100677287	100677287	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040105.1	+1	provisional	p.R864	0.000	252	0%	484	23.6%	0	-	-	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100679005	100679005	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040105.1	+1	provisional	p.S1436	0.000	273	0%	410	27.3%	0	-	-	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100679059	100679059	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040105.1	+1	provisional	p.K1454N	0.000	213	0%	317	35%	0	-	unknown(0)	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100681359	100681359	+	Missense_Mutation	SNP	C	C	A	rs11979706	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040105.1	+1	provisional	p.P2221Q	0.042	150	0%	461	37.3%	0	-	unknown(0)	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100682949	100682949	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040105.1	+1	provisional	p.T2751I	0.161	295	0%	460	26.7%	0	-	probably_damaging(0.982)	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100684298	100684298	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040105.1	+1	provisional	p.A3201S	0.000	295	0%	541	29.6%	0	-	probably_damaging(0.965)	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100685291	100685291	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040105.1	+1	provisional	p.S3532P	0.009	162	0%	285	28.4%	0	-	probably_damaging(0.995)	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100695205	100695205	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040105.1	+1	provisional	p.L4355	0.000	138	0%	190	29.5%	0	-	-	-	-	NULL
MUC17	140453	genome.wustl.edu	37	7	100701292	100701292	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040105.1	+1	provisional	p.I4483M	0.352	180	0%	281	38.1%	0	-	unknown(0)	-	-	NULL
VGF	7425	genome.wustl.edu	37	7	100808074	100808074	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003378.3	-1	reviewed	p.I17	0.890	21	0%	26	30.8%	4	75%	-	-	-	NULL
MOGAT3	346606	genome.wustl.edu	37	7	100839478	100839478	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178176.2	-1	provisional	p.I287	0.981	30	0%	62	30.6%	0	-	-	-	-	HMMPfam_DAGAT
MOGAT3	346606	genome.wustl.edu	37	7	100843789	100843789	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178176.2	-1	provisional	p.F39L	0.086	124	0%	347	36%	0	-	benign(0.002)	tolerated(0.89)	-	NULL
PLOD3	8985	genome.wustl.edu	37	7	100849679	100849679	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000454310	-1	known	p.S226F	0.006	45	0%	63	22.2%	185	44.8%	-	-	-	HMMPfam_2OG-FeII_Oxy,HMMSmart_SM00702
PLOD3	8985	genome.wustl.edu	37	7	100853834	100853834	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000454310	-1	known	p.S68F	1.000	62	0%	98	29.6%	124	24.1%	-	-	-	NULL
PLOD3	8985	genome.wustl.edu	37	7	100856462	100856462	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001084.4	-1	reviewed	p.R235W	0.157	38	0%	70	41.4%	65	47.6%	possibly_damaging(0.943)	deleterious(0.02)	deleterious(0.770)	NULL
PLOD3	8985	genome.wustl.edu	37	7	100861240	100861240	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000414785	-1	known	p.F4Y	0.041	19	0%	43	39.5%	5	40%	unknown(0)	-	-	NULL
MYL10	93408	genome.wustl.edu	37	7	101259545	101259545	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138403.4	-1	validated	p.F163C	1.000	83	0%	203	35%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_EFh,superfamily_SSF47473
MYL10	93408	genome.wustl.edu	37	7	101266313	101266313	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138403.4	-1	validated	p.D105N	0.984	74	0%	99	22.2%	0	-	possibly_damaging(0.778)	tolerated(0.05)	deleterious(0.636)	HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_SSF47473
MYL10	93408	genome.wustl.edu	37	7	101267468	101267468	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138403.4	-1	validated	p.I52S	1.000	103	0%	183	33.3%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
CUX1	1523	genome.wustl.edu	37	7	101559470	101559470	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181552.2	+1	reviewed	p.E36K	1.000	62	0%	180	28.3%	15	40%	possibly_damaging(0.715)	deleterious(0.01)	deleterious(0.665)	NULL
PRKRIP1	79706	genome.wustl.edu	37	7	102036933	102036933	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024653.3	+1	validated	p.K25N	1.000	9	0.000	12	0.333	24	54.1%	benign(0.366)	deleterious(0)	deleterious(0.561)	NULL
FBXL13	222235	genome.wustl.edu	37	7	102669052	102669052	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145032.3	-1	validated	p.L71R	0.022	175	0%	161	32.9%	0	-	possibly_damaging(0.708)	tolerated(0.21)	neutral(0.299)	NULL
NAPEPLD	222236	genome.wustl.edu	37	7	102760132	102760132	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122838.1	-1	validated	p.R278Q	0.981	132	0%	234	36.3%	3	33.3%	probably_damaging(0.996)	deleterious(0.03)	deleterious(0.826)	superfamily_SSF56281
DNAJC2	27000	genome.wustl.edu	37	7	102953082	102953082	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014377.1	-1	reviewed	p.V600	0.212	249	0%	300	35.3%	61	54%	-	-	-	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding
SLC26A5	375611	genome.wustl.edu	37	7	103050847	103050847	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198999.2	-1	reviewed	p.I240	1.000	66	0%	82	34.1%	0	-	-	-	-	HMMPfam_Sulfate_transp
SLC26A5	375611	genome.wustl.edu	37	7	103053541	103053541	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198999.2	-1	reviewed	p.L104R	1.000	100	0%	128	22.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RELN	5649	genome.wustl.edu	37	7	103124118	103124118	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005045.3	-1	reviewed	p.V3388G	1.000	141	0%	240	34.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
RELN	5649	genome.wustl.edu	37	7	103151406	103151406	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005045.3	-1	reviewed	p.F2722L	1.000	127	0%	167	34.7%	0	-	possibly_damaging(0.943)	deleterious(0.02)	deleterious(0.770)	superfamily_Sialidase
RELN	5649	genome.wustl.edu	37	7	103159942	103159942	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005045.3	-1	reviewed	p.T2564A	1.000	145	0%	216	27.3%	0	-	possibly_damaging(0.877)	deleterious(0.01)	deleterious(0.747)	NULL
RELN	5649	genome.wustl.edu	37	7	103180853	103180853	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005045.3	-1	reviewed	p.P2241S	1.000	53	0%	86	32.6%	0	-	probably_damaging(0.999)	tolerated(0.32)	deleterious(0.514)	NULL
RELN	5649	genome.wustl.edu	37	7	103197580	103197580	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005045.3	-1	reviewed	p.L1881M	0.999	200	0%	260	30.4%	0	-	probably_damaging(0.999)	tolerated(0.1)	deleterious(0.777)	NULL
RELN	5649	genome.wustl.edu	37	7	103275998	103275998	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005045.3	-1	reviewed	p.S780Y	1.000	155	0%	139	29.5%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
MLL5	55904	genome.wustl.edu	37	7	104741944	104741944	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018682.3	+1	reviewed	p.E599*	1.000	129	0%	147	35.4%	5	20%	-	-	-	NULL
SRPK2	6733	genome.wustl.edu	37	7	104909273	104909273	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182691.1	-1	validated	p.E6	1.000	166	0%	238	31.5%	0	-	-	-	-	NULL
ATXN7L1	222255	genome.wustl.edu	37	7	105260699	105260699	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020725.1	-1	validated	p.R489*	1.000	189	0%	230	30.9%	0	-	-	-	-	NULL
CDHR3	222256	genome.wustl.edu	37	7	105655580	105655580	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152750.4	+1	validated	p.E416D	1.000	187	0.5%	191	27.2%	0	-	benign(0.033)	-	-	HMMSmart_SM00112,superfamily_Cadherin-like
PIK3CG	5294	genome.wustl.edu	37	7	106509376	106509376	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002649.2	+1	reviewed	p.K457T	1.000	95	0%	159	34%	0	-	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_PI3K_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
PIK3CG	5294	genome.wustl.edu	37	7	106515198	106515198	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002649.2	+1	reviewed	p.E781K	0.013	188	0%	187	33.2%	0	-	benign(0)	tolerated(0.57)	neutral(0.006)	superfamily_Protein kinase-like (PK-like)
PIK3CG	5294	genome.wustl.edu	37	7	106523486	106523486	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002649.2	+1	reviewed	p.E880K	1.000	75	0%	126	42.1%	0	-	benign(0.216)	deleterious(0)	neutral(0.466)	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,superfamily_Protein kinase-like (PK-like)
COG5	10466	genome.wustl.edu	37	7	106850985	106850985	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006348.3	-1	validated	p.R818	0.997	101	0%	86	20.9%	23	30.4%	-	-	-	NULL
GPR22	2845	genome.wustl.edu	37	7	107115012	107115012	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005295.2	+1	reviewed	p.F169L	1.000	44	0%	21	42.9%	0	-	possibly_damaging(0.797)	tolerated(0.44)	neutral(0.312)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
GPR22	2845	genome.wustl.edu	37	7	107115371	107115371	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005295.2	+1	reviewed	p.S289Y	1.000	208	0%	114	31.6%	0	-	probably_damaging(0.96)	deleterious(0)	deleterious(0.848)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
BCAP29	55973	genome.wustl.edu	37	7	107221278	107221278	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008405.2	+1	validated	p.I21L	0.935	164	0%	214	29.4%	11	45.4%	benign(0.002)	tolerated(1)	-	HMMPfam_Bap31
BCAP29	55973	genome.wustl.edu	37	7	107253834	107253834	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008405.2	+1	validated	p.S216L	0.993	129	0%	159	17.6%	17	17.6%	benign(0.001)	tolerated(0.12)	neutral(0.261)	HMMPfam_Bap31
SLC26A3	1811	genome.wustl.edu	37	7	107414577	107414577	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000111.2	-1	reviewed	p.D599Y	0.001	390	0%	503	34.6%	0	-	benign(0.359)	deleterious(0.01)	deleterious(0.520)	HMMPfam_STAS,superfamily_STAS
SLC26A3	1811	genome.wustl.edu	37	7	107414591	107414591	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000111.2	-1	reviewed	p.F594C	0.006	349	0%	466	36.5%	0	-	benign(0.001)	tolerated(0.14)	neutral(0.249)	HMMPfam_STAS,superfamily_STAS
LAMB1	3912	genome.wustl.edu	37	7	107600255	107600255	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002291.2	-1	reviewed	p.S780L	1.000	45	0%	72	33.3%	46	15.2%	possibly_damaging(0.728)	deleterious(0.04)	deleterious(0.614)	HMMPfam_Laminin_EGF,HMMSmart_SM00180,HMMSmart_SM00181,superfamily_EGF/Laminin
LAMB1	3912	genome.wustl.edu	37	7	107602031	107602031	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002291.2	-1	reviewed	p.D650Y	1.000	196	0%	253	33.6%	25	8%	probably_damaging(0.999)	tolerated(0.15)	deleterious(0.732)	NULL
LAMB4	22798	genome.wustl.edu	37	7	107688370	107688370	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007356.2	-1	validated	p.R1437S	0.000	182	0%	252	33.7%	0	-	benign(0.044)	tolerated(0.59)	neutral(0.007)	NULL
LAMB4	22798	genome.wustl.edu	37	7	107717449	107717449	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007356.2	-1	validated	p.V688	0.995	158	0%	177	41.8%	0	-	-	-	-	NULL
NRCAM	4897	genome.wustl.edu	37	7	107823245	107823245	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037132.1	-1	reviewed	p.V808	0.998	118	0%	159	34%	1	100%	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
IMMP2L	83943	genome.wustl.edu	37	7	110526659	110526659	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032549.2	-1	provisional	p.S133Y	1.000	254	0.8%	249	33.3%	3	0%	benign(0.055)	tolerated(0.11)	neutral(0.275)	superfamily_LexA/Signal peptidase
DOCK4	9732	genome.wustl.edu	37	7	111422927	111422927	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014705.3	-1	reviewed	p.S1184I	1.000	282	0%	264	32.6%	2	50%	possibly_damaging(0.903)	deleterious(0)	deleterious(0.802)	NULL
DOCK4	9732	genome.wustl.edu	37	7	111585841	111585841	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014705.3	-1	reviewed	p.F238L	1.000	69	0%	84	34.5%	0	-	benign(0.007)	tolerated(1)	-	NULL
ZNF277	11179	genome.wustl.edu	37	7	111980968	111980968	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021994.2	+1	validated	p.R351W	1.000	137	0%	193	33.7%	33	36.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TMEM168	64418	genome.wustl.edu	37	7	112415367	112415367	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022484.4	-1	validated	p.N379H	1.000	98	0%	131	38.2%	6	50%	possibly_damaging(0.814)	deleterious(0.01)	deleterious(0.713)	NULL
TMEM168	64418	genome.wustl.edu	37	7	112424324	112424324	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022484.4	-1	validated	p.A186D	1.000	69	0%	103	32%	1	100%	possibly_damaging(0.536)	deleterious(0)	deleterious(0.625)	NULL
PPP1R3A	5506	genome.wustl.edu	37	7	113518162	113518162	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002711.3	-1	reviewed	p.Q995H	0.000	252	0%	136	30.1%	0	-	probably_damaging(0.961)	deleterious(0.02)	deleterious(0.787)	NULL
PPP1R3A	5506	genome.wustl.edu	37	7	113519043	113519043	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002711.3	-1	reviewed	p.L702V	0.563	347	0%	200	31.5%	0	-	probably_damaging(0.979)	deleterious(0.05)	deleterious(0.767)	NULL
PPP1R3A	5506	genome.wustl.edu	37	7	113519690	113519690	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002711.3	-1	reviewed	p.R486Q	0.000	106	0%	57	33.3%	0	-	possibly_damaging(0.904)	deleterious(0.02)	deleterious(0.742)	NULL
FOXP2	93986	genome.wustl.edu	37	7	114282531	114282531	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148898.2	+1	reviewed	p.D306G	1.000	268	0%	364	34.9%	0	-	probably_damaging(0.995)	deleterious(0.03)	deleterious(0.822)	NULL
MET	4233	genome.wustl.edu	37	7	116339777	116339777	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127500.1	+1	reviewed	p.S213	0.000	172	0%	126	33.3%	1	100%	-	-	-	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
MET	4233	genome.wustl.edu	37	7	116340056	116340056	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127500.1	+1	reviewed	p.K306N	1.000	81	0%	48	39.6%	0	-	possibly_damaging(0.848)	deleterious(0)	deleterious(0.770)	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
MET	4233	genome.wustl.edu	37	7	116422057	116422057	+	Missense_Mutation	SNP	G	G	T	rs45541232		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127500.1	+1	reviewed	p.D1198Y	1.000	86	0%	98	16.3%	1	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
CFTR	1080	genome.wustl.edu	37	7	117180158	117180158	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000492.3	+1	reviewed	p.E292*	1.000	284	0.4%	235	35.7%	0	-	-	-	-	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
CFTR	1080	genome.wustl.edu	37	7	117227878	117227878	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000492.3	+1	reviewed	p.S557Y	1.000	230	0%	151	38.4%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,PatternScan_ABC_TRANSPORTER_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
CTTNBP2	83992	genome.wustl.edu	37	7	117358095	117358095	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033427.2	-1	reviewed	p.L1575M	0.547	237	0%	324	30.9%	2	50%	possibly_damaging(0.742)	tolerated(0.21)	neutral(0.316)	NULL
CTTNBP2	83992	genome.wustl.edu	37	7	117422918	117422918	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000446636	-1	known	p.R278*	0.979	93	0%	88	28.4%	0	-	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
CTTNBP2	83992	genome.wustl.edu	37	7	117431531	117431531	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000446636	-1	known	p.E102K	0.008	243	0%	380	34.2%	1	0%	-	-	-	HMMPfam_CortBP2
CTTNBP2	83992	genome.wustl.edu	37	7	117431606	117431606	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000446636	-1	known	p.K77E	1.000	209	0%	319	35.7%	1	0%	-	-	-	HMMPfam_CortBP2
ANKRD7	56311	genome.wustl.edu	37	7	117879985	117879985	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000417525	+1	known	p.R191Q	0.000	261	0%	366	29%	2	100%	benign(0.225)	tolerated(0.12)	neutral(0.283)	NULL
ING3	54556	genome.wustl.edu	37	7	120609089	120609089	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019071.2	+1	reviewed	p.S247R	1.000	140	0.7%	211	27%	5	40%	possibly_damaging(0.777)	deleterious(0)	deleterious(0.734)	NULL
C7orf58	79974	genome.wustl.edu	37	7	120765902	120765902	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024913.4	+1	validated	p.F364V	0.934	470	0%	439	31.9%	1	0%	benign(0.001)	deleterious(0)	neutral(0.445)	NULL
C7orf58	79974	genome.wustl.edu	37	7	120773893	120773893	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024913.4	+1	validated	p.D532Y	0.001	247	0%	135	32.6%	1	0%	possibly_damaging(0.837)	deleterious(0.02)	deleterious(0.703)	NULL
PTPRZ1	5803	genome.wustl.edu	37	7	121650823	121650823	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002851.2	+1	reviewed	p.T575A	0.067	103	0%	64	35.9%	0	-	benign(0.002)	tolerated(0.13)	neutral(0.253)	NULL
PTPRZ1	5803	genome.wustl.edu	37	7	121651862	121651862	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002851.2	+1	reviewed	p.S921Y	1.000	221	0%	236	36.4%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
PTPRZ1	5803	genome.wustl.edu	37	7	121682689	121682689	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002851.2	+1	reviewed	p.Y1943	0.988	158	0%	196	24.5%	1	100%	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
PTPRZ1	5803	genome.wustl.edu	37	7	121701264	121701264	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002851.2	+1	reviewed	p.S2313Y	1.000	122	0%	95	27.4%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
AASS	10157	genome.wustl.edu	37	7	121738871	121738871	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005763.3	-1	reviewed	p.L486I	1.000	58	0%	28	14.3%	3	0%	probably_damaging(0.994)	tolerated(0.05)	deleterious(0.797)	HMMPfam_Saccharop_dh,superfamily_NAD(P)-binding Rossmann-fold domains
FEZF1	389549	genome.wustl.edu	37	7	121942273	121942273	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024613.2	-1	validated	p.C398	1.000	151	0%	289	37%	6	16.6%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
FEZF1	389549	genome.wustl.edu	37	7	121942968	121942968	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024613.2	-1	validated	p.C314	1.000	118	0%	184	35.9%	4	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
FEZF1	389549	genome.wustl.edu	37	7	121943363	121943363	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024613.2	-1	validated	p.V264	0.994	111	0%	136	25.7%	3	33.3%	-	-	-	HMMSmart_ZnF_C2H2
CADPS2	93664	genome.wustl.edu	37	7	121960333	121960333	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000397721	-1	known	p.L862V	0.307	268	0%	363	32%	30	46.6%	-	-	-	NULL
CADPS2	93664	genome.wustl.edu	37	7	121985672	121985672	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017954.10	-1	reviewed	p.R1190*	1.000	478	0.2%	413	29.5%	11	0%	-	-	-	NULL
CADPS2	93664	genome.wustl.edu	37	7	122033593	122033593	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000397721	-1	known	p.L573I	0.993	130	0%	138	39.9%	6	16.6%	-	-	-	NULL
RNF133	168433	genome.wustl.edu	37	7	122338543	122338543	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139175.1	-1	reviewed	p.H144N	0.999	163	0%	145	34.5%	0	-	possibly_damaging(0.823)	tolerated(0.07)	deleterious(0.631)	HMMPfam_PA,superfamily_SSF52025
CADPS2	93664	genome.wustl.edu	37	7	122377022	122377022	+	Missense_Mutation	SNP	C	C	T	rs187155107	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017954.10	-1	reviewed	p.R147Q	0.947	206	0%	190	25.3%	3	0%	possibly_damaging(0.516)	tolerated(1)	neutral(0.173)	NULL
TAS2R16	50833	genome.wustl.edu	37	7	122635169	122635169	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016945.2	-1	reviewed	p.H174N	0.000	230	0%	214	34.1%	0	-	benign(0.22)	tolerated(0.32)	neutral(0.045)	HMMPfam_TAS2R
TAS2R16	50833	genome.wustl.edu	37	7	122635482	122635482	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016945.2	-1	reviewed	p.C69	0.000	74	0%	53	34%	0	-	-	-	-	HMMPfam_TAS2R
SLC13A1	6561	genome.wustl.edu	37	7	122839969	122839969	+	Missense_Mutation	SNP	C	C	T	rs143242073	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022444.3	-1	validated	p.R11H	0.990	118	0%	72	29.2%	0	-	unknown(0)	-	-	HMMPfam_Na_sulph_symp
ASB15	142685	genome.wustl.edu	37	7	123269343	123269343	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080928.3	+1	validated	p.L432R	1.000	220	0%	321	28.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Ankyrin repeat
HYAL4	23553	genome.wustl.edu	37	7	123508443	123508443	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012269.2	+1	reviewed	p.R39Q	0.318	256	0%	195	31.8%	0	-	benign(0.003)	tolerated(0.52)	neutral(0.009)	HMMPfam_Glyco_hydro_56
HYAL4	23553	genome.wustl.edu	37	7	123508855	123508855	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012269.2	+1	reviewed	p.K176N	0.010	59	0%	65	23.1%	0	-	benign(0.002)	tolerated(0.3)	neutral(0.029)	HMMPfam_Glyco_hydro_56,superfamily_Glyco_hydro_cat
HYAL4	23553	genome.wustl.edu	37	7	123517105	123517105	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012269.2	+1	reviewed	p.E448*	0.794	184	0%	220	39.5%	0	-	-	-	-	NULL
SPAM1	6677	genome.wustl.edu	37	7	123594119	123594119	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003117.4	+1	reviewed	p.K165N	0.006	82	0%	57	31.6%	0	-	benign(0.378)	deleterious(0)	deleterious(0.565)	HMMPfam_Glyco_hydro_56,superfamily_Glyco_hydro_cat
SPAM1	6677	genome.wustl.edu	37	7	123599765	123599765	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003117.4	+1	reviewed	p.E424D	0.000	233	0%	130	35.4%	0	-	benign(0.001)	tolerated(0.38)	neutral(0.018)	NULL
GPR37	2861	genome.wustl.edu	37	7	124386935	124386935	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005302.2	-1	provisional	p.A496T	1.000	104	0%	132	32.6%	21	42.8%	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
POT1	25913	genome.wustl.edu	37	7	124482862	124482862	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015450.2	-1	reviewed	p.L388M	0.951	160	0%	197	35%	8	50%	probably_damaging(0.979)	tolerated(0.18)	deleterious(0.478)	NULL
GRM8	2918	genome.wustl.edu	37	7	126542657	126542657	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000845.2	-1	reviewed	p.E365D	1.000	333	0%	331	35%	0	-	benign(0)	tolerated(0.76)	neutral(0.001)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRM8	2918	genome.wustl.edu	37	7	126882821	126882821	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000845.2	-1	reviewed	p.K146N	1.000	204	0%	172	32%	0	-	possibly_damaging(0.914)	tolerated(0.18)	neutral(0.422)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
ZNF800	168850	genome.wustl.edu	37	7	127014678	127014678	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000265827	-1	known	p.E238*	1.000	275	0.4%	336	29.8%	3	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2
GCC1	79571	genome.wustl.edu	37	7	127222277	127222277	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024523.5	-1	reviewed	p.E707K	0.926	278	0%	399	25.1%	21	57.1%	benign(0)	tolerated(0.81)	neutral(0.001)	NULL
PAX4	5078	genome.wustl.edu	37	7	127254590	127254590	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006193.2	-1	reviewed	p.L120M	0.996	127	0%	188	34%	0	-	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	HMMPfam_PAX,HMMSmart_PAX,superfamily_Homeodomain_like
LRRC4	64101	genome.wustl.edu	37	7	127670216	127670216	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022143.4	-1	validated	p.E160K	1.000	82	0%	104	34.6%	4	50%	benign(0.31)	tolerated(0.12)	neutral(0.357)	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like
IMPDH1	3614	genome.wustl.edu	37	7	128037057	128037057	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000883.3	-1	reviewed	p.S365L	1.000	106	0%	227	33.9%	16	43.7%	possibly_damaging(0.81)	deleterious(0)	deleterious(0.750)	HMMPfam_IMPDH,superfamily_SSF51412
FAM71F2	346653	genome.wustl.edu	37	7	128315753	128315753	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012454.3	+1	validated	p.D69N	0.169	56	0%	74	32.4%	1	100%	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	NULL
CCDC136	64753	genome.wustl.edu	37	7	128441290	128441290	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022742.3	+1	validated	p.E133*	0.998	112	0%	185	39.5%	2	0%	-	-	-	NULL
FAM40B	57464	genome.wustl.edu	37	7	129125455	129125455	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020704.2	+1	validated	p.E764*	1.000	74	0%	103	44.7%	1	0%	-	-	-	NULL
NRF1	4899	genome.wustl.edu	37	7	129317486	129317486	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040110.1	+1	reviewed	p.T118M	1.000	147	0%	278	32%	4	25%	probably_damaging(0.996)	tolerated(0.05)	deleterious(0.807)	HMMPfam_Nrf1_DNA-bind
NRF1	4899	genome.wustl.edu	37	7	129350253	129350253	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040110.1	+1	reviewed	p.C269G	1.000	131	0%	251	38.2%	14	71.4%	probably_damaging(0.963)	deleterious(0.01)	deleterious(0.811)	HMMPfam_Nrf1_DNA-bind
CPA4	51200	genome.wustl.edu	37	7	129933075	129933075	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016352.3	+1	reviewed	p.E19*	0.862	247	0%	302	30.5%	0	-	-	-	-	superfamily_Protease propeptides/inhibitors
CPA5	93979	genome.wustl.edu	37	7	130008376	130008376	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127441.1	+1	validated	p.A417T	0.998	147	0%	118	31.4%	1	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases
MKLN1	4289	genome.wustl.edu	37	7	131071967	131071967	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013255.4	+1	validated	p.K86T	1.000	220	0%	312	31.1%	3	33.3%	probably_damaging(0.98)	tolerated(0.1)	deleterious(0.710)	superfamily_Galactose-binding domain-like,HMMPfam_Muskelin_N
MKLN1	4289	genome.wustl.edu	37	7	131128290	131128290	+	Silent	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013255.4	+1	validated	p.I408	1.000	240	0%	324	33%	11	45.4%	-	-	-	superfamily_Galactose oxidase central domain
MKLN1	4289	genome.wustl.edu	37	7	131155689	131155689	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013255.4	+1	validated	p.E673*	1.000	224	0%	209	34.4%	21	14.2%	-	-	-	NULL
PLXNA4	91584	genome.wustl.edu	37	7	131831426	131831426	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020911.1	-1	validated	p.S1633I	1.000	177	0.6%	207	38.2%	1	0%	probably_damaging(0.994)	tolerated(0.43)	neutral(0.466)	superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl
PLXNA4	91584	genome.wustl.edu	37	7	131849946	131849946	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020911.1	-1	validated	p.A1434T	1.000	150	0%	216	29.6%	2	50%	possibly_damaging(0.915)	deleterious(0.01)	deleterious(0.772)	superfamily_GTPase activation domain GAP,HMMPfam_Plexin_cytopl
PLXNA4	91584	genome.wustl.edu	37	7	131872290	131872290	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020911.1	-1	validated	p.N978S	1.000	225	0%	163	25.8%	0	-	possibly_damaging(0.594)	tolerated(0.45)	neutral(0.217)	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains
PLXNA4	91584	genome.wustl.edu	37	7	131895873	131895873	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020911.1	-1	validated	p.K709N	1.000	54	0%	52	42.3%	0	-	benign(0.087)	deleterious(0.02)	neutral(0.390)	NULL
PLXNA4	91584	genome.wustl.edu	37	7	132193118	132193118	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020911.1	-1	validated	p.N112S	1.000	73	0%	92	37%	0	-	benign(0.008)	deleterious(0.05)	neutral(0.345)	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
LRGUK	136332	genome.wustl.edu	37	7	133943142	133943142	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144648.1	+1	provisional	p.E778K	0.001	108	0%	137	38%	2	0%	benign(0.026)	tolerated(0.13)	neutral(0.254)	NULL
CALD1	800	genome.wustl.edu	37	7	134552545	134552545	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033138.3	+1	reviewed	p.E21K	0.997	124	0%	301	30.6%	31	0%	benign(0.043)	-	-	HMMPfam_Caldesmon
CALD1	800	genome.wustl.edu	37	7	134618446	134618446	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033138.3	+1	reviewed	p.R309I	0.007	581	0%	1198	32.5%	1	0%	unknown(0)	tolerated(0.11)	-	HMMPfam_Caldesmon
CALD1	800	genome.wustl.edu	37	7	134625977	134625977	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033138.3	+1	reviewed	p.E507D	1.000	94	0%	139	23.7%	42	7.1%	unknown(0)	tolerated(0.07)	-	HMMPfam_Caldesmon
WDR91	29062	genome.wustl.edu	37	7	134882867	134882867	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014149.3	-1	validated	p.D310N	1.000	55	0%	46	43.5%	7	57.1%	possibly_damaging(0.825)	deleterious(0.01)	deleterious(0.718)	NULL
STRA8	346673	genome.wustl.edu	37	7	134928122	134928122	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182489.1	+1	provisional	p.V127I	1.000	185	0%	379	29.8%	0	-	possibly_damaging(0.757)	tolerated(0.46)	neutral(0.292)	NULL
CHRM2	1129	genome.wustl.edu	37	7	136700188	136700188	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000739.2	+1	reviewed	p.I192	0.785	83	0%	48	20.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
DGKI	9162	genome.wustl.edu	37	7	137151664	137151664	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000453654	-1	known	p.R541Q	1.000	167	0%	163	30.7%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
DGKI	9162	genome.wustl.edu	37	7	137170135	137170135	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004717.2	-1	reviewed	p.Q804	1.000	267	0%	146	32.2%	0	-	-	-	-	NULL
DGKI	9162	genome.wustl.edu	37	7	137172414	137172414	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004717.2	-1	reviewed	p.V775G	1.000	154	0%	129	27.1%	2	0%	probably_damaging(0.995)	tolerated(0.24)	deleterious(0.495)	NULL
SVOPL	136306	genome.wustl.edu	37	7	138281184	138281184	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001139456.1	-1	validated	p.E482G	1.000	99	0%	121	33.1%	1	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_MFS general substrate transporter
SVOPL	136306	genome.wustl.edu	37	7	138344672	138344672	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001139456.1	-1	validated	p.S136L	0.997	124	0%	326	34.4%	0	-	possibly_damaging(0.789)	tolerated(0.14)	deleterious(0.545)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
ATP6V0A4	50617	genome.wustl.edu	37	7	138447695	138447695	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020632.2	-1	reviewed	p.E123K	1.000	399	0%	543	31.1%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_V_ATPase_I
KIAA1549	57670	genome.wustl.edu	37	7	138554405	138554405	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020910.2	-1	validated	p.D1502Y	1.000	39	0%	58	31%	14	28.5%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
UBN2	254048	genome.wustl.edu	37	7	138957074	138957074	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173569.3	+1	validated	p.R452C	1.000	135	0%	183	32.2%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HIPK2	28996	genome.wustl.edu	37	7	139268663	139268663	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022740.4	-1	validated	p.A606V	0.140	236	0%	371	34.5%	4	0%	-	-	-	NULL
HIPK2	28996	genome.wustl.edu	37	7	139416729	139416729	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000263551	-1	known	p.P35	0.996	212	0%	327	43.4%	4	25%	-	-	-	NULL
PARP12	64761	genome.wustl.edu	37	7	139737552	139737552	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022750.2	-1	provisional	p.F429L	0.997	44	0%	53	26.4%	5	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
DENND2A	27147	genome.wustl.edu	37	7	140244477	140244477	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015689.3	-1	validated	p.V756	0.999	70	0%	142	43%	1	0%	-	-	-	HMMPfam_DENN,HMMSmart_SM00799
DENND2A	27147	genome.wustl.edu	37	7	140285394	140285394	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015689.3	-1	validated	p.T414A	0.658	134	0%	240	30.8%	3	0%	benign(0)	tolerated(0.19)	neutral(0.050)	NULL
BRAF	673	genome.wustl.edu	37	7	140482852	140482852	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004333.4	-1	reviewed	p.S428*	1.000	150	0%	214	37.4%	3	66.6%	-	-	-	NULL
TAS2R3	50831	genome.wustl.edu	37	7	141464166	141464166	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016943.2	+1	reviewed	p.E70*	0.000	275	0%	321	32.4%	0	-	-	-	-	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like
OR9A4	130075	genome.wustl.edu	37	7	141619273	141619273	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001656.1	+1	provisional	p.F200V	0.830	253	0%	341	33.7%	0	-	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
TAS2R38	5726	genome.wustl.edu	37	7	141673045	141673045	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176817.4	-1	reviewed	p.L149I	0.000	91	0%	123	33.3%	0	-	benign(0.032)	tolerated(0.21)	neutral(0.045)	HMMPfam_TAS2R,superfamily_SSF81321
MGAM	8972	genome.wustl.edu	37	7	141708503	141708503	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004668.2	+1	reviewed	p.K109E	0.992	146	0%	83	38.6%	0	-	possibly_damaging(0.937)	tolerated(0.34)	neutral(0.406)	HMMPfam_Trefoil
MGAM	8972	genome.wustl.edu	37	7	141724905	141724905	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004668.2	+1	reviewed	p.S313I	1.000	383	0.3%	453	33.8%	0	-	possibly_damaging(0.659)	deleterious(0.01)	deleterious(0.638)	NULL
MGAM	8972	genome.wustl.edu	37	7	141730229	141730229	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004668.2	+1	reviewed	p.F430C	0.012	257	0%	220	30.9%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Glyco_hydro_31
MGAM	8972	genome.wustl.edu	37	7	141738373	141738373	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004668.2	+1	reviewed	p.F758L	0.101	93	0%	89	27%	0	-	possibly_damaging(0.898)	tolerated(0.23)	neutral(0.396)	HMMPfam_Glyco_hydro_31
MGAM	8972	genome.wustl.edu	37	7	141752763	141752763	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004668.2	+1	reviewed	p.K1046	0.749	137	0%	151	27.2%	0	-	-	-	-	NULL
MGAM	8972	genome.wustl.edu	37	7	141754553	141754553	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004668.2	+1	reviewed	e26-1	1.000	150	0%	145	39.3%	0	-	-	-	-	-
MGAM	8972	genome.wustl.edu	37	7	141778133	141778133	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000475668	+1	known	p.D1838N	0.946	61	0%	50	26%	0	-	unknown(0)	tolerated(0.66)	-	NULL
MGAM	8972	genome.wustl.edu	37	7	141783194	141783194	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000475668	+1	known	p.V2122A	1.000	145	0%	176	28.4%	0	-	unknown(0)	tolerated(0.1)	-	HMMPfam_Glyco_hydro_31
TRBV6-9	28598	genome.wustl.edu	37	7	142104260	142104260	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390379	-1	known	p.V69F	0.000	289	0%	430	33%	0	-	benign(0)	tolerated(0.59)	neutral(0.004)	HMMPfam_V-set,superfamily_SSF48726
TRBV7-7	28591	genome.wustl.edu	37	7	142119920	142119920	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390377	-1	known	p.R83W	0.000	143	0%	224	33%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
TRBV27	28560	genome.wustl.edu	37	7	142423663	142423663	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390399	+1	known	p.L107M	0.000	45	0%	77	40.3%	0	-	benign(0.056)	tolerated(0.09)	neutral(0.300)	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin
TRBV29-1	28558	genome.wustl.edu	37	7	142448473	142448473	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000422143	+1	known	p.P23T	0.982	148	0%	130	33.8%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_V-set,superfamily_SSF48726
TRPV5	56302	genome.wustl.edu	37	7	142606730	142606730	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019841.4	-1	reviewed	p.K607N	1.000	84	0%	93	26.9%	0	-	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
KEL	3792	genome.wustl.edu	37	7	142658027	142658027	+	Missense_Mutation	SNP	G	G	A	rs184131044	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000420.2	-1	reviewed	p.R130W	0.045	246	0%	354	31.1%	0	-	benign(0.041)	tolerated(0.1)	neutral(0.289)	"HMMPfam_Peptidase_M13_N,superfamily_Metalloproteases (""zincins"") catalytic domain"
TAS2R39	259285	genome.wustl.edu	37	7	142880675	142880675	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176881.2	+1	provisional	p.I55S	0.560	220	0%	251	31.1%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_TAS2R,superfamily_SSF81321
TAS2R39	259285	genome.wustl.edu	37	7	142881330	142881330	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176881.2	+1	provisional	p.F273L	0.735	199	0%	248	33.5%	0	-	benign(0.012)	tolerated(0.42)	neutral(0.015)	HMMPfam_TAS2R,superfamily_SSF81321
CLCN1	1180	genome.wustl.edu	37	7	143018475	143018475	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000083.2	+1	reviewed	p.A151T	0.765	251	0%	350	33.1%	0	-	benign(0.001)	tolerated(0.48)	neutral(0.011)	superfamily_Clc chloride channel
TAS2R41	259287	genome.wustl.edu	37	7	143175295	143175295	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176883.2	+1	provisional	p.K110	0.999	139	0%	152	38.2%	0	-	-	-	-	HMMPfam_TAS2R,superfamily_SSF81321
TAS2R41	259287	genome.wustl.edu	37	7	143175748	143175748	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176883.2	+1	provisional	p.Q261H	0.075	307	0%	385	40.5%	0	-	probably_damaging(0.968)	tolerated(0.12)	deleterious(0.670)	HMMPfam_TAS2R,superfamily_SSF81321
FAM115A	9747	genome.wustl.edu	37	7	143573678	143573678	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014719.1	-1	predicted	p.F8	0.940	68	0%	109	33.9%	5	60%	-	-	-	NULL
OR2F2	135948	genome.wustl.edu	37	7	143633203	143633203	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004685.1	+1	provisional	p.R293M	0.914	112	0%	165	30.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Family A G protein-coupled receptor-like
OR2F2	135948	genome.wustl.edu	37	7	143633232	143633232	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004685.1	+1	provisional	p.K303E	0.799	67	0%	88	38.6%	0	-	probably_damaging(0.985)	deleterious(0.01)	deleterious(0.838)	superfamily_Family A G protein-coupled receptor-like
OR2A5	393046	genome.wustl.edu	37	7	143747770	143747770	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012365.1	+1	provisional	p.I92	0.992	152	0%	247	32%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR2A5	393046	genome.wustl.edu	37	7	143747892	143747892	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012365.1	+1	provisional	p.S133Y	0.968	158	0%	252	29.8%	0	-	possibly_damaging(0.44)	deleterious(0.01)	deleterious(0.549)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR2A25	392138	genome.wustl.edu	37	7	143771516	143771516	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004488.1	+1	provisional	p.V68	0.000	139	0.7%	175	33.7%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR2A25	392138	genome.wustl.edu	37	7	143772230	143772230	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004488.1	+1	provisional	p.K306N	0.003	120	0%	115	29.6%	0	-	benign(0.01)	deleterious(0.02)	neutral(0.384)	superfamily_SSF81321
OR2A12	346525	genome.wustl.edu	37	7	143792270	143792270	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004135.1	+1	provisional	p.L24	0.000	328	0%	407	29.7%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
ARHGEF35	445328	genome.wustl.edu	37	7	143884023	143884023	+	Nonstop_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003702.2	-1	validated	p.*485L	0.017	19	0%	19	42.1%	10	100%	-	-	-	NULL
OR2A42	402317	genome.wustl.edu	37	7	143929875	143929875	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001802.1	-1	provisional	p.R15M	0.015	181	0%	192	14.6%	0	-	benign(0.005)	tolerated(0.06)	neutral(0.323)	superfamily_Family A G protein-coupled receptor-like
OR2A7	401427	genome.wustl.edu	37	7	143956260	143956260	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005328.1	-1	provisional	p.L154	0.000	293	0%	523	9.6%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
LOC728377	728377	genome.wustl.edu	37	7	143983168	143983168	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_078379.1	-1	model	NULL	0.001	430	0%	786	28.5%	5	20%	-	-	-	-
ARHGEF5	7984	genome.wustl.edu	37	7	144059984	144059984	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005435.3	+1	reviewed	p.T74	0.000	368	0.3%	589	13.6%	4	25%	-	-	-	NULL
NOBOX	135935	genome.wustl.edu	37	7	144095567	144095567	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000467773	-1	known	p.F528V	0.001	146	0%	402	30.8%	1	0%	benign(0.195)	deleterious(0)	neutral(0.463)	NULL
TPK1	27010	genome.wustl.edu	37	7	144150652	144150652	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022445.3	-1	reviewed	p.A240T	1.000	171	0%	163	32.5%	0	-	possibly_damaging(0.711)	tolerated(0.13)	deleterious(0.510)	superfamily_TPK_B1_bd
CNTNAP2	26047	genome.wustl.edu	37	7	147092835	147092835	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014141.5	+1	reviewed	p.A545T	1.000	134	0%	83	34.9%	0	-	possibly_damaging(0.538)	deleterious(0.04)	deleterious(0.531)	superfamily_Concanavalin A-like lectins/glucanases
CNTNAP2	26047	genome.wustl.edu	37	7	147926862	147926862	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014141.5	+1	reviewed	p.I1124	0.000	160	0%	217	31.8%	0	-	-	-	-	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
LOC643438	643438	genome.wustl.edu	37	7	148334301	148334301	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_015310.2	+1	model	NULL	0.156	121	0%	229	30.1%	0	-	-	-	-	-
CUL1	8454	genome.wustl.edu	37	7	148454195	148454195	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003592.2	+1	validated	p.R146C	1.000	178	0%	316	35.4%	15	40%	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	HMMPfam_Cullin,superfamily_Cullin repeat
EZH2	2146	genome.wustl.edu	37	7	148523717	148523717	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004456.3	-1	reviewed	p.E246*	1.000	95	1.1%	117	38.5%	5	20%	-	-	-	HMMSmart_SANT
ZNF786	136051	genome.wustl.edu	37	7	148771551	148771551	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152411.3	-1	validated	p.Q75	0.004	209	0%	441	25.9%	4	50%	-	-	-	NULL
ZNF467	168544	genome.wustl.edu	37	7	149467625	149467625	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207336.1	-1	provisional	p.E19*	1.000	89	0%	135	25.2%	7	0%	-	-	-	NULL
SSPO	23145	genome.wustl.edu	37	7	149482289	149482289	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000378016	+1	known	p.T988S	1.000	86	0%	96	34.4%	0	-	-	-	-	superfamily_Serine proterase inhibitors,HMMSmart_SM00215,superfamily_PMP inhibitors
SSPO	23145	genome.wustl.edu	37	7	149494378	149494378	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000378016	+1	known	p.K2283N	0.398	114	0%	115	27%	0	-	-	-	-	NULL
SSPO	23145	genome.wustl.edu	37	7	149522371	149522371	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000378016	+1	known	p.S4667R	1.000	52	0%	53	37.7%	0	-	-	-	-	superfamily_Serine proterase inhibitors
ZNF862	643641	genome.wustl.edu	37	7	149545038	149545038	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099220.1	+1	provisional	p.M152I	0.532	94	0%	148	31.1%	9	44.4%	benign(0.002)	deleterious(0.01)	neutral(0.406)	HMMSmart_SM00597
GIMAP8	155038	genome.wustl.edu	37	7	150164222	150164222	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175571.2	+1	reviewed	p.D146Y	0.293	145	0%	184	30.4%	0	-	probably_damaging(0.984)	deleterious(0.01)	deleterious(0.836)	HMMPfam_AIG1,superfamily_SSF52540
GIMAP8	155038	genome.wustl.edu	37	7	150171653	150171653	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175571.2	+1	reviewed	p.A412	0.002	101	0%	166	30.7%	1	0%	-	-	-	HMMPfam_AIG1,superfamily_SSF52540
GIMAP8	155038	genome.wustl.edu	37	7	150174839	150174839	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175571.2	+1	reviewed	p.L657I	0.003	42	0%	45	33.3%	2	0%	benign(0.004)	tolerated(0.28)	neutral(0.032)	superfamily_SSF52540
ABP1	26	genome.wustl.edu	37	7	150557692	150557692	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001091.2	+1	reviewed	p.L654I	1.000	130	0%	141	29.8%	0	-	benign(0.023)	tolerated(1)	neutral(0.001)	HMMPfam_Cu_amine_oxid,superfamily_Amine oxidase catalytic domain
ATG9B	285973	genome.wustl.edu	37	7	150715069	150715069	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173681.5	-1	validated	p.P647	0.170	98	0%	184	34.8%	2	50%	-	-	-	HMMPfam_APG9
SLC4A2	6522	genome.wustl.edu	37	7	150761715	150761715	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003040.3	+1	validated	p.R107Q	0.997	95	0%	120	42.5%	40	32.5%	probably_damaging(0.963)	deleterious(0.03)	deleterious(0.770)	NULL
SMARCD3	6604	genome.wustl.edu	37	7	150936821	150936821	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003801.1	-1	reviewed	p.T395	1.000	182	0%	285	33.7%	22	9%	-	-	-	NULL
GALNTL5	168391	genome.wustl.edu	37	7	151711728	151711728	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145292.3	+1	validated	e7-1	1.000	107	0%	200	29%	0	-	-	-	-	-
MLL3	58508	genome.wustl.edu	37	7	151856008	151856008	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000360104	-1	known	p.G1376*	1.000	457	0.2%	646	32.8%	6	66.6%	probably_damaging(0.999)	-	-	NULL
MLL3	58508	genome.wustl.edu	37	7	151873366	151873366	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170606.2	-1	reviewed	p.L3058I	1.000	279	0%	331	33.2%	3	0%	probably_damaging(0.995)	-	-	NULL
MLL3	58508	genome.wustl.edu	37	7	151878883	151878883	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170606.2	-1	reviewed	p.R2021M	0.763	105	0%	205	25.4%	2	50%	probably_damaging(0.992)	-	-	NULL
MLL3	58508	genome.wustl.edu	37	7	151884866	151884866	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170606.2	-1	reviewed	p.S1576Y	0.934	175	0%	231	32%	2	0%	probably_damaging(0.992)	-	-	NULL
MLL3	58508	genome.wustl.edu	37	7	152009030	152009030	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170606.2	-1	reviewed	p.E198*	1.000	63	0%	72	31.9%	2	0%	-	-	-	NULL
DPP6	1804	genome.wustl.edu	37	7	154667655	154667655	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000377770	+1	known	p.F641	0.993	80	0%	98	41.8%	0	-	-	-	-	HMMPfam_Peptidase_S9,superfamily_alpha/beta-Hydrolases
LOC100132707	100132707	genome.wustl.edu	37	7	154738320	154738320	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_024476.1	+1	validated	NULL	0.000	124	0%	155	30.3%	2	0%	-	-	-	-
HTR5A	3361	genome.wustl.edu	37	7	154863198	154863198	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024012.2	+1	reviewed	p.E197K	1.000	89	1.1%	111	27%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
RBM33	155435	genome.wustl.edu	37	7	155493618	155493618	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000392761	+1	known	p.G12*	1.000	126	0%	246	31.7%	23	56.5%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
RNF32	140545	genome.wustl.edu	37	7	156447397	156447397	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030936.2	+1	reviewed	p.F134	0.443	100	0%	155	33.5%	3	33.3%	-	-	-	HMMSmart_SM00184,HMMPfam_zf-C3HC4,superfamily_RING/U-box
UBE3C	9690	genome.wustl.edu	37	7	157023978	157023978	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014671.2	+1	validated	p.S813Y	1.000	111	0%	110	27.3%	21	42.8%	benign(0.045)	tolerated(0.18)	neutral(0.059)	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
DNAJB6	10049	genome.wustl.edu	37	7	157151315	157151315	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_058246.3	+1	reviewed	p.E17K	1.000	136	0%	300	33.7%	50	36%	possibly_damaging(0.947)	tolerated(0.09)	deleterious(0.687)	HMMPfam_DnaJ,HMMSmart_SM00271,superfamily_Chaperone J-domain
PTPRN2	5799	genome.wustl.edu	37	7	157396736	157396736	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002847.3	-1	reviewed	p.E792D	0.995	47	0%	60	48.3%	0	-	benign(0.069)	tolerated(0.21)	neutral(0.048)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II
PTPRN2	5799	genome.wustl.edu	37	7	157985044	157985044	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002847.3	-1	reviewed	p.T175M	0.000	36	0%	33	24.2%	0	-	benign(0)	tolerated(0.2)	neutral(0.049)	NULL
PTPRN2	5799	genome.wustl.edu	37	7	157997904	157997904	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002847.3	-1	reviewed	p.P113	0.160	167	0%	246	32.9%	0	-	-	-	-	NULL
NCAPG2	54892	genome.wustl.edu	37	7	158486103	158486103	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017760.5	-1	validated	p.K55	0.522	324	0%	426	32.6%	2	50%	-	-	-	NULL
ZNF596	169270	genome.wustl.edu	37	8	192960	192960	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042415.1	+1	validated	p.R29I	0.506	175	0%	226	29.2%	1	0%	probably_damaging(0.96)	deleterious(0)	deleterious(0.848)	HMMSmart_SM00349
ZNF596	169270	genome.wustl.edu	37	8	195911	195911	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042415.1	+1	validated	p.R355Q	0.998	148	0%	179	31.3%	0	-	probably_damaging(0.998)	tolerated(0.11)	deleterious(0.746)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355
ZNF596	169270	genome.wustl.edu	37	8	196079	196079	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042415.1	+1	validated	p.R411I	0.608	171	0%	189	37.6%	2	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355
ZNF596	169270	genome.wustl.edu	37	8	196231	196231	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042415.1	+1	validated	p.F462V	0.000	114	0%	140	29.3%	2	0%	possibly_damaging(0.633)	deleterious(0.05)	deleterious(0.567)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355
C8orf42	157695	genome.wustl.edu	37	8	442598	442598	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175075.3	-1	validated	p.S120L	0.001	194	0%	192	31.2%	1	0%	benign(0.003)	tolerated(0.27)	neutral(0.034)	NULL
LOC100291724	100291724	genome.wustl.edu	37	8	1824810	1824810	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002346095.1	-1	model	p.S41L	0.583	330	0%	539	32.1%	0	-	-	-	-	NULL
ARHGEF10	9639	genome.wustl.edu	37	8	1824892	1824892	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014629.2	+1	reviewed	p.K279E	0.998	170	0%	304	31.2%	3	0%	possibly_damaging(0.7)	tolerated(0.28)	neutral(0.283)	NULL
ARHGEF10	9639	genome.wustl.edu	37	8	1905423	1905423	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014629.2	+1	reviewed	p.N1343K	0.001	7	0.000	6	0.667	3	0%	benign(0.005)	tolerated(0.13)	neutral(0.253)	NULL
MYOM2	9172	genome.wustl.edu	37	8	2057201	2057201	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003970.2	+1	validated	p.S1020L	0.966	213	0%	259	32.8%	0	-	possibly_damaging(0.813)	deleterious(0)	deleterious(0.752)	NULL
MYOM2	9172	genome.wustl.edu	37	8	2065711	2065711	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003970.2	+1	validated	p.T1141	0.347	292	0%	408	17.9%	2	0%	-	-	-	superfamily_SSF48726
MYOM2	9172	genome.wustl.edu	37	8	2088702	2088702	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003970.2	+1	validated	p.A1286D	1.000	139	0%	211	28.9%	1	0%	probably_damaging(0.996)	tolerated(0.09)	deleterious(0.758)	superfamily_SSF48726
CSMD1	64478	genome.wustl.edu	37	8	2910029	2910029	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033225.5	-1	validated	p.E2540*	1.000	136	0%	156	27.6%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD1	64478	genome.wustl.edu	37	8	2966166	2966166	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033225.5	-1	validated	p.S2239N	1.000	173	0%	303	30%	0	-	probably_damaging(0.955)	tolerated(0.1)	deleterious(0.685)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD1	64478	genome.wustl.edu	37	8	3047542	3047542	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033225.5	-1	validated	p.R1765*	0.778	159	0%	158	29.7%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD1	64478	genome.wustl.edu	37	8	3059241	3059241	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033225.5	-1	validated	p.F1665S	1.000	163	0%	115	33%	0	-	benign(0.055)	tolerated(0.13)	neutral(0.256)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
ANGPT2	285	genome.wustl.edu	37	8	6389979	6389979	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001147.2	-1	reviewed	p.K106N	0.997	343	0%	521	35.5%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
AGPAT5	55326	genome.wustl.edu	37	8	6582429	6582429	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018361.3	+1	reviewed	p.N86K	1.000	102	0%	85	44.7%	3	0%	possibly_damaging(0.827)	deleterious(0)	deleterious(0.758)	HMMPfam_Acyltransferase,superfamily_SSF69593
AGPAT5	55326	genome.wustl.edu	37	8	6590133	6590133	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018361.3	+1	reviewed	p.R153*	0.917	138	0%	168	30.4%	5	20%	-	-	-	HMMPfam_Acyltransferase,HMMSmart_PlsC,superfamily_SSF69593
AGPAT5	55326	genome.wustl.edu	37	8	6612681	6612681	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018361.3	+1	reviewed	p.F285	1.000	94	0%	201	32.8%	8	62.5%	-	-	-	superfamily_SSF69593
XKR5	389610	genome.wustl.edu	37	8	6668786	6668786	+	Missense_Mutation	SNP	G	G	T	rs11780406	byCluster;byHapMap	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000409172	-1	known	p.S664Y	0.238	91	0%	140	17.9%	0	-	-	-	-	NULL
XKR5	389610	genome.wustl.edu	37	8	6669420	6669420	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000409172	-1	known	p.E453*	0.018	223	0%	252	26.2%	0	-	-	-	-	NULL
XKR5	389610	genome.wustl.edu	37	8	6673426	6673426	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207411.4	-1	validated	p.E274D	1.000	82	0%	153	31.4%	0	-	-	-	-	HMMPfam_XK-related
ENSG00000216206	0	genome.wustl.edu	37	8	6973455	6973455	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000401387	-1	novel	NULL	0.045	125	0%	176	16.5%	0	-	-	-	-	-
USP17L1P	401447	genome.wustl.edu	37	8	7190976	7190976	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000382655	+1	known	p.V356	0.040	32	0%	64	18.8%	0	-	-	-	-	HMMPfam_UCH,superfamily_SSF54001
ZNF705G	100131980	genome.wustl.edu	37	8	7215658	7215658	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000400156	-1	known	p.R248I	0.967	522	0.2%	597	18.6%	0	-	possibly_damaging(0.695)	deleterious(0)	deleterious(0.694)	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667
DEFB106B	503841	genome.wustl.edu	37	8	7340190	7340190	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040704.1	-1	reviewed	p.A45D	0.003	477	0%	486	15.2%	0	-	benign(0.008)	deleterious(0.01)	neutral(0.406)	NULL
DEFB104A	140596	genome.wustl.edu	37	8	7694054	7694054	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080389.2	+1	reviewed	p.Q16	0.001	633	0%	700	15.9%	0	-	-	-	-	NULL
SGK223	157285	genome.wustl.edu	37	8	8185743	8185743	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080826.1	-1	validated	p.S850L	0.999	143	0%	262	36.3%	37	43.2%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
SGK223	157285	genome.wustl.edu	37	8	8197000	8197000	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080826.1	-1	validated	p.D770N	1.000	89	0%	115	31.3%	29	51.7%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	NULL
MFHAS1	9258	genome.wustl.edu	37	8	8748366	8748366	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004225.2	-1	reviewed	p.D735N	1.000	106	0.9%	228	30.3%	5	20%	possibly_damaging(0.475)	deleterious(0.03)	deleterious(0.521)	superfamily_Polo-box domain
PPP1R3B	79660	genome.wustl.edu	37	8	8998330	8998330	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024607.2	-1	validated	p.Y278H	0.979	128	0%	182	35.2%	5	40%	probably_damaging(0.996)	tolerated(0.3)	deleterious(0.490)	NULL
PPP1R3B	79660	genome.wustl.edu	37	8	8998766	8998766	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024607.2	-1	validated	p.H132	0.289	84	0%	188	34.6%	9	33.3%	-	-	-	HMMPfam_CBM_21
TNKS	8658	genome.wustl.edu	37	8	9437894	9437894	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003747.2	+1	validated	e2+1	1.000	149	0%	241	34%	3	100%	-	-	-	-
TNKS	8658	genome.wustl.edu	37	8	9588456	9588456	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003747.2	+1	validated	p.T686	0.009	146	0%	150	34.7%	4	75%	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
TNKS	8658	genome.wustl.edu	37	8	9610113	9610113	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003747.2	+1	validated	p.R1044W	0.998	174	0%	170	32.4%	10	50%	probably_damaging(0.953)	tolerated(0.08)	deleterious(0.697)	HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2
PRSS55	203074	genome.wustl.edu	37	8	10388978	10388978	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198464.2	+1	validated	p.P174H	1.000	45	0%	38	36.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
RP1L1	94137	genome.wustl.edu	37	8	10464467	10464467	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178857.5	-1	validated	p.L2381I	0.000	101	0%	133	30.1%	0	-	unknown(0)	deleterious(0.03)	-	NULL
RP1L1	94137	genome.wustl.edu	37	8	10465128	10465128	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178857.5	-1	validated	p.E2160D	0.000	478	0%	598	31.3%	0	-	unknown(0)	tolerated(0.23)	-	HMMPfam_S-antigen
RP1L1	94137	genome.wustl.edu	37	8	10466260	10466260	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178857.5	-1	validated	p.A1783V	0.000	258	0%	475	32.6%	0	-	unknown(0)	tolerated(0.23)	-	HMMPfam_S-antigen
RP1L1	94137	genome.wustl.edu	37	8	10467880	10467880	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178857.5	-1	validated	p.T1243I	0.000	123	0%	170	34.1%	0	-	possibly_damaging(0.557)	deleterious(0)	deleterious(0.635)	NULL
SOX7	83595	genome.wustl.edu	37	8	10583479	10583479	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031439.2	-1	reviewed	p.F312	0.843	141	0%	255	37.6%	0	-	-	-	-	NULL
PINX1	54984	genome.wustl.edu	37	8	10683732	10683732	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017884.4	-1	provisional	p.K108N	1.000	258	0%	291	29.2%	18	55.5%	probably_damaging(0.975)	tolerated(0.2)	neutral(0.466)	NULL
MTMR9	66036	genome.wustl.edu	37	8	11180245	11180245	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015458.3	+1	reviewed	p.R533Q	0.991	138	0%	170	34.1%	3	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
BLK	640	genome.wustl.edu	37	8	11406542	11406542	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001715.2	+1	validated	p.D93	0.988	157	0%	251	32.7%	0	-	-	-	-	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
BLK	640	genome.wustl.edu	37	8	11418936	11418936	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001715.2	+1	validated	p.I385	0.058	109	0%	141	30.5%	1	0%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
OR7E8P	346708	genome.wustl.edu	37	8	12542009	12542009	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000317826	-1	known	p.F226	0.000	403	0%	479	21.7%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
DLC1	10395	genome.wustl.edu	37	8	12946014	12946014	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182643.2	-1	reviewed	p.R1425Q	1.000	195	0%	283	31.4%	7	14.2%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_START,HMMSmart_SM00234,superfamily_Bet v1-like
C8orf48	157773	genome.wustl.edu	37	8	13424852	13424852	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007090.2	+1	validated	p.E118*	0.363	109	0%	179	36.3%	1	100%	-	-	-	NULL
MSR1	4481	genome.wustl.edu	37	8	16026303	16026303	+	Silent	SNP	C	C	T	rs184268751	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138715.2	-1	reviewed	p.T98	0.000	445	0%	674	32%	1	0%	-	-	-	NULL
EFHA2	286097	genome.wustl.edu	37	8	16962959	16962959	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181723.2	+1	validated	p.E375*	1.000	188	0%	128	50.8%	0	-	-	-	-	superfamily_SSF47473
ZDHHC2	51201	genome.wustl.edu	37	8	17065489	17065489	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016353.4	+1	validated	p.Q206H	1.000	308	0%	305	28.9%	22	31.8%	benign(0.003)	tolerated(0.32)	neutral(0.024)	NULL
ZDHHC2	51201	genome.wustl.edu	37	8	17067519	17067519	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016353.4	+1	validated	p.Q270P	1.000	320	0%	305	28.2%	21	28.5%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
MTMR7	9108	genome.wustl.edu	37	8	17163438	17163438	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004686.4	-1	reviewed	p.E394*	1.000	143	0%	146	26.7%	0	-	-	-	-	HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
MTMR7	9108	genome.wustl.edu	37	8	17230725	17230725	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004686.4	-1	reviewed	p.R17*	0.997	175	0%	215	30.2%	0	-	-	-	-	superfamily_PH domain-like
MTUS1	57509	genome.wustl.edu	37	8	17581259	17581259	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001924.2	-1	reviewed	p.S791R	0.714	212	0%	273	35.9%	6	16.6%	possibly_damaging(0.483)	deleterious(0.04)	deleterious(0.509)	NULL
MTUS1	57509	genome.wustl.edu	37	8	17613186	17613186	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001924.2	-1	reviewed	p.V44A	0.039	220	0%	358	28.8%	3	100%	possibly_damaging(0.585)	tolerated(1)	neutral(0.202)	NULL
FGL1	2267	genome.wustl.edu	37	8	17731930	17731930	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004467.3	-1	reviewed	p.S115	0.872	236	0%	323	26%	0	-	-	-	-	HMMPfam_Fibrinogen_C,HMMSmart_FBG,superfamily_Fibrinogen_a/b/g_C
PCM1	5108	genome.wustl.edu	37	8	17796396	17796396	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006197.3	+1	validated	p.E164*	1.000	162	0%	250	30.8%	4	25%	-	-	-	NULL
PCM1	5108	genome.wustl.edu	37	8	17815198	17815198	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006197.3	+1	validated	p.D652Y	1.000	191	0%	353	38.8%	12	25%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	NULL
PSD3	23362	genome.wustl.edu	37	8	18490315	18490315	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015310.3	-1	validated	p.D740N	1.000	268	0%	160	31.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Sec7
PSD3	23362	genome.wustl.edu	37	8	18662358	18662358	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015310.3	-1	validated	p.S562N	1.000	417	0%	421	31.6%	1	0%	possibly_damaging(0.946)	deleterious(0)	deleterious(0.835)	HMMPfam_Sec7,HMMSmart_Sec7
PSD3	23362	genome.wustl.edu	37	8	18729950	18729950	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015310.3	-1	validated	p.E142*	1.000	130	0%	166	30.7%	0	-	-	-	-	NULL
SH2D4A	63898	genome.wustl.edu	37	8	19214733	19214733	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022071.3	+1	validated	p.R178I	1.000	236	0%	302	32.8%	0	-	probably_damaging(0.982)	tolerated(0.1)	deleterious(0.713)	NULL
SH2D4A	63898	genome.wustl.edu	37	8	19231123	19231123	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022071.3	+1	validated	p.R334*	0.975	75	0%	91	31.9%	0	-	-	-	-	superfamily_SSF55550
CSGALNACT1	55790	genome.wustl.edu	37	8	19277981	19277981	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130518.1	-1	validated	p.F334L	0.843	77	0%	135	34.1%	4	25%	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	HMMPfam_CHGN,superfamily_SSF53448
LPL	4023	genome.wustl.edu	37	8	19811636	19811636	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000311322	+1	known	p.D183N	1.000	156	0%	216	33.8%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases
LZTS1	11178	genome.wustl.edu	37	8	20110674	20110674	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021020.2	-1	reviewed	p.I256	0.998	21	0%	16	31.2%	2	0%	-	-	-	NULL
LZTS1	11178	genome.wustl.edu	37	8	20110781	20110781	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021020.2	-1	reviewed	p.D221Y	1.000	35	0%	61	32.8%	0	-	possibly_damaging(0.527)	tolerated(0.18)	neutral(0.234)	NULL
EPB49	2039	genome.wustl.edu	37	8	21927730	21927730	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114135.2	+1	validated	p.I163	0.254	156	0%	253	33.6%	6	33.3%	-	-	-	NULL
FAM160B2	64760	genome.wustl.edu	37	8	21957283	21957283	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022749.5	+1	validated	p.A407V	0.313	25	0%	44	36.4%	20	20%	benign(0.002)	tolerated(0.51)	neutral(0.009)	HMMPfam_RAI16-like
LGI3	203190	genome.wustl.edu	37	8	22009164	22009164	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139278.2	-1	validated	p.F223V	1.000	43	0%	67	37.3%	0	-	possibly_damaging(0.9)	deleterious(0.01)	deleterious(0.762)	HMMPfam_EPTP,superfamily_SSF52058
LGI3	203190	genome.wustl.edu	37	8	22009379	22009379	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139278.2	-1	validated	p.D210A	0.995	21	0%	18	22.2%	0	-	benign(0.002)	tolerated(0.06)	neutral(0.323)	HMMPfam_LRRCT,HMMSmart_LRRCT,superfamily_SSF52058
PIWIL2	55124	genome.wustl.edu	37	8	22167502	22167502	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135721.1	+1	validated	p.R572I	1.000	159	0%	335	27.5%	0	-	benign(0.097)	deleterious(0.01)	neutral(0.413)	NULL
SLC39A14	23516	genome.wustl.edu	37	8	22272395	22272395	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128431.2	+1	validated	p.L244I	1.000	127	0%	205	28.8%	9	22.2%	benign(0.005)	tolerated(0.16)	neutral(0.059)	HMMPfam_Zip
PPP3CC	5533	genome.wustl.edu	37	8	22368688	22368688	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005605.3	+1	provisional	p.L192I	1.000	283	0%	527	35.7%	5	20%	benign(0.176)	tolerated(0.08)	neutral(0.316)	HMMPfam_Metallophos,HMMSmart_PP2Ac,superfamily_SSF56300
PPP3CC	5533	genome.wustl.edu	37	8	22398195	22398195	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005605.3	+1	provisional	p.I473	0.990	109	0%	198	33.3%	21	28.5%	-	-	-	superfamily_SSF56300
EGR3	1960	genome.wustl.edu	37	8	22548994	22548994	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004430.2	-1	reviewed	p.E52D	1.000	39	5.1%	41	24.4%	1	0%	unknown(0)	tolerated(1)	-	NULL
RHOBTB2	23221	genome.wustl.edu	37	8	22864390	22864390	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015178.2	+1	validated	p.R211H	1.000	63	0%	68	26.5%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF52540
TNFRSF10B	8795	genome.wustl.edu	37	8	22886048	22886048	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003842.4	-1	reviewed	p.E182*	0.000	130	0%	176	35.2%	19	26.3%	-	-	-	superfamily_TNF receptor-like
R3HCC1	203069	genome.wustl.edu	37	8	23147718	23147718	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136108.1	+1	validated	p.K9N	0.000	111	0%	257	37.7%	43	48.8%	possibly_damaging(0.605)	-	-	NULL
LOXL2	4017	genome.wustl.edu	37	8	23167216	23167216	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002318.2	-1	reviewed	p.N615	0.307	23	0%	25	20%	33	15.1%	-	-	-	HMMPfam_Lysyl_oxidase
LOXL2	4017	genome.wustl.edu	37	8	23177458	23177458	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002318.2	-1	reviewed	p.I470	0.997	159	0%	262	34.4%	22	13.6%	-	-	-	HMMPfam_SRCR,HMMSmart_SR,superfamily_Srcr_receptor
STC1	6781	genome.wustl.edu	37	8	23709024	23709024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003155.2	-1	reviewed	p.E94D	1.000	202	0%	252	32.1%	12	33.3%	probably_damaging(0.969)	tolerated(0.74)	neutral(0.413)	HMMPfam_Stanniocalcin
ADAM28	10863	genome.wustl.edu	37	8	24190190	24190190	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014265.4	+1	reviewed	p.C433	1.000	222	0%	183	31.7%	14	7.1%	-	-	-	HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin)
ADAM7	8756	genome.wustl.edu	37	8	24339742	24339742	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000380789	+1	known	p.E265*	0.558	338	0%	205	22.4%	0	-	-	-	-	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
NEFM	4741	genome.wustl.edu	37	8	24773231	24773231	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005382.2	+1	reviewed	p.I398	0.999	107	0%	168	32.1%	0	-	-	-	-	HMMPfam_Filament,PatternScan_IF
NEFM	4741	genome.wustl.edu	37	8	24774618	24774618	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005382.2	+1	reviewed	p.G417E	1.000	96	0%	160	27.5%	0	-	unknown(0)	deleterious(0.01)	-	NULL
NEFM	4741	genome.wustl.edu	37	8	24775490	24775490	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005382.2	+1	reviewed	p.E708*	0.541	205	0%	554	35%	0	-	-	-	-	NULL
NEFL	4747	genome.wustl.edu	37	8	24811235	24811235	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000221169	-1	known	p.S415I	1.000	77	0%	70	27.1%	0	-	-	-	-	NULL
DOCK5	80005	genome.wustl.edu	37	8	25101217	25101217	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024940.6	+1	validated	p.D24G	1.000	174	0%	284	26.8%	0	-	possibly_damaging(0.496)	tolerated(0.22)	neutral(0.208)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
CDCA2	157313	genome.wustl.edu	37	8	25337619	25337619	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152562.2	+1	validated	p.K337N	0.000	153	0%	209	31.6%	7	28.5%	possibly_damaging(0.901)	deleterious(0)	deleterious(0.801)	NULL
CDCA2	157313	genome.wustl.edu	37	8	25343330	25343330	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152562.2	+1	validated	p.S474*	0.852	167	0%	201	23.9%	3	0%	-	-	-	NULL
CDCA2	157313	genome.wustl.edu	37	8	25364145	25364145	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152562.2	+1	validated	p.D655Y	0.000	42	2.4%	42	28.6%	7	28.5%	benign(0.163)	tolerated(0.09)	neutral(0.311)	NULL
CDCA2	157313	genome.wustl.edu	37	8	25364296	25364296	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152562.2	+1	validated	p.K705R	0.000	67	0%	57	22.8%	1	100%	benign(0.004)	tolerated(0.25)	neutral(0.037)	NULL
EBF2	64641	genome.wustl.edu	37	8	25890654	25890654	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022659.2	-1	validated	p.K166N	1.000	268	0%	376	34.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_COE
EBF2	64641	genome.wustl.edu	37	8	25902328	25902328	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022659.2	-1	validated	p.E16	1.000	160	0%	171	31.6%	0	-	-	-	-	NULL
DPYSL2	1808	genome.wustl.edu	37	8	26484785	26484785	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001386.4	+1	validated	p.A199T	1.000	147	0%	264	33.7%	11	9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Amidohydro_1,superfamily_Composite domain of metallo-dependent hydrolases,superfamily_Metallo-dependent hydrolases
ADRA1A	148	genome.wustl.edu	37	8	26721631	26721631	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033303.3	-1	reviewed	p.L286	1.000	64	0%	83	36.1%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
PTK2B	2185	genome.wustl.edu	37	8	27277504	27277504	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004103.3	+1	reviewed	p.S99	0.281	132	0%	165	36.4%	0	-	-	-	-	HMMSmart_SM00295
PTK2B	2185	genome.wustl.edu	37	8	27293815	27293815	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004103.3	+1	reviewed	p.L431I	1.000	293	0%	496	31.9%	3	0%	possibly_damaging(0.575)	tolerated(1)	neutral(0.197)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP
PTK2B	2185	genome.wustl.edu	37	8	27296578	27296578	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004103.3	+1	reviewed	p.A558	0.891	143	0%	277	33.9%	6	0%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
CHRNA2	1135	genome.wustl.edu	37	8	27321383	27321383	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000742.3	-1	reviewed	p.D193N	1.000	163	0%	283	33.6%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like,PatternScan_NEUROTR_ION_CHANNEL
CHRNA2	1135	genome.wustl.edu	37	8	27327480	27327480	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000742.3	-1	reviewed	p.R31H	0.000	46	0%	44	25%	0	-	benign(0)	tolerated(0.33)	neutral(0.024)	NULL
EPHX2	2053	genome.wustl.edu	37	8	27401307	27401307	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001979.4	+1	reviewed	p.F497	0.000	94	0%	148	27.7%	1	0%	-	-	-	HMMPfam_Abhydrolase_1,superfamily_SSF53474
CCDC25	55246	genome.wustl.edu	37	8	27610037	27610037	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018246.2	-1	validated	p.S79N	1.000	169	0%	261	25.7%	11	36.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF814
SCARA5	286133	genome.wustl.edu	37	8	27779209	27779209	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173833.4	-1	provisional	p.A265	0.530	17	0%	20	25%	0	-	-	-	-	NULL
C8orf80	389643	genome.wustl.edu	37	8	27927822	27927822	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010906.1	-1	provisional	p.R32Q	0.070	228	0%	274	31%	0	-	benign(0.242)	deleterious(0.05)	neutral(0.370)	NULL
C8orf80	389643	genome.wustl.edu	37	8	27931916	27931916	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010906.1	-1	provisional	p.T4	0.000	212	0%	287	37.3%	0	-	-	-	-	NULL
HMBOX1	79618	genome.wustl.edu	37	8	28827636	28827636	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135726.1	+1	validated	p.R34W	1.000	62	0%	113	34.5%	2	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
KIF13B	23303	genome.wustl.edu	37	8	28974356	28974356	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015254.3	-1	validated	p.G1277C	0.987	61	0%	57	22.8%	13	23%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
MBOAT4	619373	genome.wustl.edu	37	8	29989648	29989648	+	Silent	SNP	C	C	T	rs148514134		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100916.1	-1	validated	p.P373	0.000	71	0%	148	29.1%	0	-	unknown(0)	-	-	HMMPfam_MBOAT
MBOAT4	619373	genome.wustl.edu	37	8	29989722	29989722	+	Missense_Mutation	SNP	C	C	T	rs142555089		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100916.1	-1	validated	p.V349I	0.703	114	0%	209	42.1%	1	100%	benign(0.001)	tolerated(0.13)	neutral(0.253)	HMMPfam_MBOAT
MBOAT4	619373	genome.wustl.edu	37	8	29990402	29990402	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100916.1	-1	validated	p.S122Y	0.988	16	6.2%	56	30.4%	0	-	possibly_damaging(0.915)	deleterious(0)	deleterious(0.811)	HMMPfam_MBOAT
DCTN6	10671	genome.wustl.edu	37	8	30040650	30040650	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006571.2	+1	reviewed	p.K178N	1.000	224	0%	388	32.5%	46	26%	probably_damaging(0.986)	deleterious(0.02)	deleterious(0.818)	superfamily_Trimeric LpxA-like enzymes
TEX15	56154	genome.wustl.edu	37	8	30701930	30701930	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031271.3	-1	validated	p.P1535L	0.000	265	0%	306	30.1%	0	-	benign(0.001)	tolerated(0.3)	neutral(0.029)	NULL
TEX15	56154	genome.wustl.edu	37	8	30702456	30702456	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031271.3	-1	validated	p.L1360I	0.000	178	0%	144	34%	0	-	possibly_damaging(0.936)	tolerated(0.26)	neutral(0.415)	NULL
TEX15	56154	genome.wustl.edu	37	8	30704082	30704082	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031271.3	-1	validated	p.L818I	0.000	73	0%	58	25.9%	0	-	possibly_damaging(0.666)	tolerated(0.23)	neutral(0.277)	NULL
TEX15	56154	genome.wustl.edu	37	8	30706515	30706515	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031271.3	-1	validated	p.D7Y	0.000	60	0%	125	24.8%	0	-	benign(0.01)	deleterious(0.03)	neutral(0.365)	NULL
WRN	7486	genome.wustl.edu	37	8	30938552	30938552	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000553.4	+1	reviewed	p.E337*	0.000	114	0%	198	31.8%	1	0%	-	-	-	NULL
NRG1	3084	genome.wustl.edu	37	8	32505432	32505432	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013959.3	+1	reviewed	p.R66C	1.000	113	0%	118	28.8%	0	-	possibly_damaging(0.886)	deleterious(0)	deleterious(0.791)	NULL
NRG1	3084	genome.wustl.edu	37	8	32621456	32621456	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013956.3	+1	reviewed	p.R492W	1.000	119	0.8%	137	26.3%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Neuregulin
TTI2	80185	genome.wustl.edu	37	8	33369624	33369624	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102401.1	-1	validated	p.E170K	0.000	99	0%	185	39.5%	20	40%	benign(0)	tolerated(0.8)	neutral(0.001)	HMMPfam_DUF2454
KCNU1	157855	genome.wustl.edu	37	8	36666273	36666273	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031836.2	+1	validated	p.L232I	0.926	320	0%	298	37.2%	0	-	benign(0.004)	tolerated(1)	-	HMMPfam_Ion_trans,superfamily_SSF81324
KCNU1	157855	genome.wustl.edu	37	8	36671735	36671735	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031836.2	+1	validated	p.S248F	1.000	140	0%	156	28.8%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_Ion_trans,superfamily_SSF81324
KCNU1	157855	genome.wustl.edu	37	8	36768513	36768513	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031836.2	+1	validated	p.V799	0.388	163	0%	160	31.9%	0	-	-	-	-	NULL
ERLIN2	11160	genome.wustl.edu	37	8	37599316	37599316	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007175.6	+1	validated	p.K72N	1.000	133	0%	247	26.7%	11	9%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_Band_7,HMMSmart_SM00244
RAB11FIP1	80223	genome.wustl.edu	37	8	37734659	37734659	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002814.2	-1	validated	p.D261G	0.000	117	0%	319	34.8%	4	75%	benign(0.402)	tolerated(0.38)	neutral(0.147)	NULL
GOT1L1	137362	genome.wustl.edu	37	8	37793310	37793310	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152413.2	-1	validated	p.L281V	0.000	53	0%	71	26.8%	0	-	benign(0.059)	tolerated(0.13)	neutral(0.257)	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
ASH2L	9070	genome.wustl.edu	37	8	37985892	37985892	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004674.3	+1	validated	p.R417W	0.997	109	0%	269	35.3%	22	13.6%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
STAR	6770	genome.wustl.edu	37	8	38008293	38008293	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000349.2	-1	reviewed	p.R15I	1.000	82	0%	152	28.9%	1	100%	possibly_damaging(0.903)	deleterious(0.03)	deleterious(0.722)	NULL
DDHD2	23259	genome.wustl.edu	37	8	38099773	38099773	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015214.2	+1	validated	p.D240Y	1.000	110	0%	250	24%	9	33.3%	possibly_damaging(0.903)	deleterious(0.04)	deleterious(0.707)	NULL
C8orf86	389649	genome.wustl.edu	37	8	38373948	38373948	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207412.1	-1	predicted	p.S133Y	0.000	161	0%	299	29.8%	0	-	unknown(0)	-	-	NULL
TM2D2	83877	genome.wustl.edu	37	8	38852992	38852992	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024380.1	-1	validated	p.T11A	0.000	235	0%	417	34.8%	17	52.9%	unknown(0)	-	-	NULL
ADAM32	203102	genome.wustl.edu	37	8	39089620	39089620	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145004.5	+1	validated	p.D534N	0.000	305	0%	266	33.8%	0	-	possibly_damaging(0.701)	tolerated(0.08)	deleterious(0.552)	HMMPfam_ADAM_CR,HMMSmart_SM00608
ADAM32	203102	genome.wustl.edu	37	8	39111964	39111964	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145004.5	+1	validated	p.S645L	0.000	135	0%	87	28.7%	1	0%	benign(0.044)	tolerated(0.17)	neutral(0.061)	PatternScan_EGF_2,HMMPfam_EGF_2
ADAM18	8749	genome.wustl.edu	37	8	39467034	39467034	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014237.1	+1	reviewed	p.E100K	0.017	260	0%	249	30.5%	0	-	probably_damaging(0.957)	tolerated(0.13)	deleterious(0.653)	HMMPfam_Pep_M12B_propep
ADAM18	8749	genome.wustl.edu	37	8	39495060	39495060	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014237.1	+1	reviewed	p.F222C	0.966	213	0%	147	27.9%	0	-	benign(0.226)	deleterious(0)	neutral(0.467)	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
ADAM2	2515	genome.wustl.edu	37	8	39645641	39645641	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001464.3	-1	reviewed	p.L258I	1.000	206	0%	171	32.7%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
ANK1	286	genome.wustl.edu	37	8	41553945	41553945	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142446.1	-1	reviewed	p.A1007T	1.000	32	0%	40	25%	0	-	benign(0.143)	tolerated(0.12)	neutral(0.273)	HMMPfam_ZU5,HMMSmart_ZU5
ANK1	286	genome.wustl.edu	37	8	41577373	41577373	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142446.1	-1	reviewed	p.G338S	1.000	190	0%	268	31%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
KAT6A	7994	genome.wustl.edu	37	8	41790387	41790387	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099412.1	-1	validated	p.V1784A	1.000	309	0%	581	32.7%	16	37.5%	possibly_damaging(0.806)	tolerated(0.88)	neutral(0.303)	NULL
KAT6A	7994	genome.wustl.edu	37	8	41792352	41792352	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099412.1	-1	validated	p.R1129Q	0.981	120	0%	138	35.5%	9	33.3%	unknown(0)	deleterious(0.03)	-	NULL
KAT6A	7994	genome.wustl.edu	37	8	41834706	41834706	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099412.1	-1	validated	p.D395Y	1.000	217	0%	299	34.8%	2	0%	unknown(0)	deleterious(0.01)	-	NULL
IKBKB	3551	genome.wustl.edu	37	8	42162728	42162728	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001556.1	+1	validated	p.E138*	1.000	171	0%	344	34.9%	7	28.5%	-	-	-	superfamily_Kinase_like,HMMPfam_Pkinase
IKBKB	3551	genome.wustl.edu	37	8	42178258	42178258	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000416505	+1	known	p.R508*	0.526	55	0%	93	34.4%	13	30.7%	-	-	-	NULL
IKBKB	3551	genome.wustl.edu	37	8	42179581	42179581	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001556.1	+1	validated	p.T583N	0.108	195	0%	354	37.9%	19	26.3%	unknown(0)	-	-	NULL
SLC20A2	6575	genome.wustl.edu	37	8	42295059	42295059	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006749.3	-1	provisional	p.S324L	0.998	81	0%	133	29.3%	13	23%	benign(0.001)	tolerated(0.45)	neutral(0.012)	HMMPfam_PHO4
POTEA	340441	genome.wustl.edu	37	8	43159841	43159841	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005365.2	+1	validated	e6-1	0.008	120	0%	62	24.2%	0	-	-	-	-	-
ENSG00000215179	0	genome.wustl.edu	37	8	47885252	47885252	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000399732	-1	known	p.D327Y	1.000	169	0%	269	20.8%	0	-	-	-	-	superfamily_Protein kinase-like (PK-like)
LOC100287980	100287980	genome.wustl.edu	37	8	48001266	48001266	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342844.1	-1	model	p.D218A	0.001	18	0%	18	44.4%	0	-	-	-	-	NULL
PRKDC	5591	genome.wustl.edu	37	8	48790402	48790402	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000314191	-1	known	p.A1748E	0.998	70	0%	102	36.3%	0	-	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	superfamily_ARM repeat
PRKDC	5591	genome.wustl.edu	37	8	48827897	48827897	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000314191	-1	known	p.L870I	0.982	211	0%	200	34.5%	0	-	possibly_damaging(0.573)	deleterious(0.03)	deleterious(0.561)	NULL
PRKDC	5591	genome.wustl.edu	37	8	48843348	48843348	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000314191	-1	known	e17-1	1.000	94	0%	150	32%	1	100%	-	-	-	-
PRKDC	5591	genome.wustl.edu	37	8	48869957	48869957	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000314191	-1	known	p.F63	0.146	188	0%	271	31%	1	100%	-	-	-	superfamily_ARM repeat
MCM4	4173	genome.wustl.edu	37	8	48878806	48878806	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005914.2	+1	reviewed	p.E298K	1.000	48	0%	66	31.8%	41	58.5%	possibly_damaging(0.947)	deleterious(0.01)	deleterious(0.796)	HMMSmart_MCM,superfamily_Nucleic_acid_OB
MCM4	4173	genome.wustl.edu	37	8	48883364	48883364	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005914.2	+1	reviewed	p.F576	0.987	41	0%	64	34.4%	53	41.5%	-	-	-	HMMPfam_MCM,HMMSmart_MCM,HMMSmart_AAA,PatternScan_MCM_1,superfamily_SSF52540
UBE2V2	7336	genome.wustl.edu	37	8	48973338	48973338	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003350.2	+1	reviewed	p.E130*	1.000	135	0%	221	32.6%	31	48.3%	-	-	-	HMMSmart_SM00212,superfamily_UBC-like
SNAI2	6591	genome.wustl.edu	37	8	49831491	49831491	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003068.3	-1	reviewed	p.L228M	1.000	190	0%	254	33.1%	6	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SNAI2	6591	genome.wustl.edu	37	8	49832958	49832958	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003068.3	-1	reviewed	p.V41A	1.000	103	0%	184	28.8%	5	0%	benign(0)	tolerated(1)	-	NULL
SNAI2	6591	genome.wustl.edu	37	8	49833801	49833801	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003068.3	-1	reviewed	p.K8N	1.000	285	0%	377	36.3%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
C8orf22	492307	genome.wustl.edu	37	8	49985442	49985442	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007176.3	+1	validated	p.R18Q	0.999	231	0%	307	29.6%	0	-	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	NULL
C8orf22	492307	genome.wustl.edu	37	8	49986691	49986691	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007176.3	+1	validated	p.Q43H	0.029	257	0%	260	24.2%	0	-	probably_damaging(0.956)	tolerated(0.37)	neutral(0.419)	NULL
PXDNL	137902	genome.wustl.edu	37	8	52320650	52320650	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144651.4	-1	validated	p.S1178	0.050	199	0%	153	32.7%	0	-	-	-	-	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases
RB1CC1	9821	genome.wustl.edu	37	8	53558288	53558288	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014781.4	-1	reviewed	p.R1321*	0.991	124	0%	122	28.7%	17	0%	-	-	-	NULL
RB1CC1	9821	genome.wustl.edu	37	8	53568773	53568773	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014781.4	-1	reviewed	p.E1206K	0.968	405	0%	374	33.2%	11	9%	benign(0)	tolerated(0.71)	neutral(0.002)	NULL
RB1CC1	9821	genome.wustl.edu	37	8	53569953	53569953	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014781.4	-1	reviewed	p.I812M	0.983	189	0%	202	35.6%	5	40%	benign(0.167)	deleterious(0.01)	neutral(0.421)	NULL
RB1CC1	9821	genome.wustl.edu	37	8	53570450	53570450	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014781.4	-1	reviewed	p.S647P	0.998	141	0%	148	27%	7	0%	probably_damaging(0.974)	deleterious(0.05)	deleterious(0.761)	NULL
ATP6V1H	51606	genome.wustl.edu	37	8	54656139	54656139	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015941.2	-1	reviewed	p.N463	1.000	62	0%	55	45.5%	138	44.2%	-	-	-	superfamily_ARM repeat
RP1	6101	genome.wustl.edu	37	8	55533636	55533636	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006269.1	+1	reviewed	p.R37Q	1.000	216	0%	351	35.9%	0	-	probably_damaging(0.973)	deleterious(0.01)	deleterious(0.821)	HMMSmart_DCX,superfamily_SSF89837
RP1	6101	genome.wustl.edu	37	8	55537376	55537376	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006269.1	+1	reviewed	p.I312V	0.696	118	0%	138	34.8%	0	-	benign(0.393)	tolerated(0.38)	neutral(0.144)	NULL
RP1	6101	genome.wustl.edu	37	8	55538093	55538093	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006269.1	+1	reviewed	p.E551*	1.000	143	0%	220	29.5%	0	-	-	-	-	NULL
RP1	6101	genome.wustl.edu	37	8	55538364	55538364	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006269.1	+1	reviewed	p.R641I	0.057	37	0%	58	44.8%	0	-	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	NULL
RP1	6101	genome.wustl.edu	37	8	55540655	55540655	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006269.1	+1	reviewed	p.E1405*	0.007	82	0%	93	21.5%	0	-	-	-	-	NULL
RP1	6101	genome.wustl.edu	37	8	55542453	55542453	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006269.1	+1	reviewed	p.R2004I	0.704	107	0%	115	32.2%	1	100%	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
XKR4	114786	genome.wustl.edu	37	8	56436607	56436607	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052898.1	+1	provisional	p.E592*	1.000	155	0.6%	212	32.1%	0	-	-	-	-	NULL
TMEM68	137695	genome.wustl.edu	37	8	56668946	56668946	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152417.1	-1	provisional	p.K117T	1.000	139	0%	162	34%	3	33.3%	benign(0.052)	deleterious(0.01)	neutral(0.409)	HMMPfam_Acyltransferase
LYN	4067	genome.wustl.edu	37	8	56922615	56922615	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002350.2	+1	validated	p.S495	0.504	52	0%	95	34.7%	4	0%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
RPS20	6224	genome.wustl.edu	37	8	56982386	56982386	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000427539	-1	known	p.E114K	0.001	79	0%	131	36.6%	4	75%	possibly_damaging(0.65)	tolerated(0.06)	deleterious(0.550)	superfamily_Ribosomal_S10
RPS20	6224	genome.wustl.edu	37	8	56985812	56985812	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001023.3	-1	reviewed	p.R66I	0.998	133	0%	306	32.7%	5898	42.2%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Ribosomal_S10,superfamily_Ribosomal protein S10
PLAG1	5324	genome.wustl.edu	37	8	57079778	57079778	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114634.1	-1	reviewed	p.S176L	0.999	120	0%	103	38.8%	0	-	probably_damaging(0.978)	deleterious(0.04)	deleterious(0.769)	NULL
SDR16C5	195814	genome.wustl.edu	37	8	57219352	57219352	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138969.2	-1	validated	p.F198S	0.002	162	0%	177	35%	3	66.6%	benign(0.01)	deleterious(0)	neutral(0.445)	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains
SDR16C5	195814	genome.wustl.edu	37	8	57228857	57228857	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138969.2	-1	validated	p.K17R	0.016	79	0%	139	33.1%	2	50%	benign(0.004)	tolerated(0.35)	neutral(0.021)	NULL
SDR16C6P	442388	genome.wustl.edu	37	8	57285688	57285688	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000444271	-1	known	p.S304Y	0.000	206	0%	291	34%	0	-	-	-	-	NULL
UBXN2B	137886	genome.wustl.edu	37	8	59352299	59352299	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077619.1	+1	validated	p.A214V	1.000	178	0%	267	33.7%	4	0%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_SEP,HMMSmart_SEP
CYP7A1	1581	genome.wustl.edu	37	8	59404924	59404924	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000780.3	-1	reviewed	p.Y401	1.000	159	0%	247	30.4%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome_P450
CYP7A1	1581	genome.wustl.edu	37	8	59409435	59409435	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000780.3	-1	reviewed	p.F212	0.999	218	0%	262	32.1%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome_P450
SDCBP	6386	genome.wustl.edu	37	8	59490753	59490753	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007067.1	+1	reviewed	p.M188I	1.000	126	0%	147	28.6%	104	36.5%	benign(0.011)	tolerated(0.2)	neutral(0.050)	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
NSMAF	8439	genome.wustl.edu	37	8	59522267	59522267	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144772.1	-1	reviewed	p.H226Y	1.000	157	0%	208	31.7%	3	33.3%	benign(0.01)	tolerated(1)	neutral(0.001)	HMMPfam_GRAM,HMMSmart_SM00568,superfamily_PH domain-like
TOX	9760	genome.wustl.edu	37	8	59750747	59750747	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014729.2	-1	reviewed	p.R273C	1.000	168	0%	187	34.8%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HMG_box,HMMSmart_HMG,superfamily_HMG-box
CHD7	55636	genome.wustl.edu	37	8	61654249	61654249	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017780.2	+1	reviewed	p.P86	0.665	111	0%	162	28.4%	2	0%	-	-	-	NULL
CHD7	55636	genome.wustl.edu	37	8	61720811	61720811	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017780.2	+1	reviewed	p.F826L	1.000	263	0%	215	30.7%	0	-	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	HMMPfam_Chromo,HMMSmart_SM00298,superfamily_Chromo domain-like
CHD7	55636	genome.wustl.edu	37	8	61741318	61741318	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017780.2	+1	reviewed	p.E1159*	1.000	155	0%	168	18.5%	3	33.3%	-	-	-	HMMPfam_SNF2_N,HMMSmart_SM00487
CHD7	55636	genome.wustl.edu	37	8	61773574	61773574	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017780.2	+1	reviewed	p.L2574I	0.998	145	0%	251	36.7%	16	50%	benign(0.243)	deleterious(0.05)	neutral(0.370)	HMMPfam_BRK,HMMSmart_SM00592
ENSG00000237810	0	genome.wustl.edu	37	8	63057145	63057145	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000433538	-1	known	p.F30	1.000	38	0%	45	31.1%	0	-	-	-	-	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
NKAIN3	286183	genome.wustl.edu	37	8	63659606	63659606	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173688.2	+1	provisional	p.Y130C	1.000	212	0%	227	29.5%	0	-	possibly_damaging(0.938)	tolerated(0.16)	neutral(0.443)	HMMPfam_NKAIN
GGH	8836	genome.wustl.edu	37	8	63927957	63927957	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003878.2	-1	reviewed	p.I297M	1.000	258	0%	250	28.8%	126	57.1%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	superfamily_SSF52317
GGH	8836	genome.wustl.edu	37	8	63930182	63930182	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003878.2	-1	reviewed	p.K235	0.017	149	0%	135	35.6%	137	39.4%	-	-	-	HMMPfam_Peptidase_C26,superfamily_SSF52317
CYP7B1	9420	genome.wustl.edu	37	8	65517257	65517257	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004820.3	-1	reviewed	p.E405D	0.728	194	0%	246	28.5%	0	-	probably_damaging(0.965)	deleterious(0.02)	deleterious(0.790)	HMMPfam_p450,superfamily_Cytochrome P450
ADHFE1	137872	genome.wustl.edu	37	8	67361109	67361109	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144650.2	+1	validated	p.S213L	0.996	160	0%	219	34.2%	0	-	benign(0.038)	tolerated(0.11)	neutral(0.274)	HMMPfam_Fe-ADH,superfamily_Dehydroquinate synthase-like
MYBL1	4603	genome.wustl.edu	37	8	67507910	67507910	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080416.2	-1	validated	p.K199Q	1.000	271	0%	381	29.4%	1	100%	probably_damaging(0.983)	deleterious(0.01)	deleterious(0.835)	NULL
MYBL1	4603	genome.wustl.edu	37	8	67511363	67511363	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080416.2	-1	validated	p.F71	1.000	120	0%	130	31.5%	1	100%	-	-	-	HMMSmart_SANT,superfamily_Homeodomain_like,HMMPfam_Myb_DNA-binding
C8orf44	56260	genome.wustl.edu	37	8	67591967	67591967	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019607.1	+1	provisional	p.L86F	0.217	134	0%	270	33.7%	2	50%	unknown(0)	-	-	NULL
COPS5	10987	genome.wustl.edu	37	8	67971643	67971643	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006837.2	-1	reviewed	p.A61T	1.000	139	0%	227	37%	84	40.4%	possibly_damaging(0.565)	deleterious(0.01)	deleterious(0.599)	HMMPfam_Mov34,HMMSmart_JAB_MPN,superfamily_SSF102712
CSPP1	79848	genome.wustl.edu	37	8	68070810	68070810	+	Missense_Mutation	SNP	G	G	T	rs190028385	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077204.1	+1	validated	p.K820N	1.000	76	0%	219	29.7%	9	77.7%	possibly_damaging(0.566)	tolerated(0.17)	neutral(0.253)	NULL
ARFGEF1	10565	genome.wustl.edu	37	8	68165758	68165758	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006421.3	-1	reviewed	p.E876*	1.000	553	0%	654	29.7%	3	0%	-	-	-	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7,superfamily_ARM-type_fold
CPA6	57094	genome.wustl.edu	37	8	68396961	68396961	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020361.4	-1	validated	p.I234V	1.000	210	0%	322	39.4%	0	-	benign(0.001)	tolerated(0.59)	neutral(0.004)	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases
PREX2	80243	genome.wustl.edu	37	8	68981343	68981343	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024870.2	+1	validated	p.R472I	1.000	145	0%	242	31.8%	4	75%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	"superfamily_""Winged helix"" DNA-binding domain"
PREX2	80243	genome.wustl.edu	37	8	68992692	68992692	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024870.2	+1	validated	p.E553K	1.000	186	0%	191	69.1%	0	-	possibly_damaging(0.934)	deleterious(0.05)	deleterious(0.726)	"HMMPfam_DEP,HMMSmart_SM00049,superfamily_""Winged helix"" DNA-binding domain"
SULF1	23213	genome.wustl.edu	37	8	70536227	70536227	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128204.1	+1	validated	p.E549K	1.000	72	0%	122	74.6%	59	0%	possibly_damaging(0.659)	deleterious(0.02)	deleterious(0.616)	superfamily_Alkaline_phosphatase_core
LOC100288066	100288066	genome.wustl.edu	37	8	70585015	70585015	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342855.1	+1	model	p.K48I	0.996	30	0%	17	23.5%	3	100%	-	-	-	NULL
SLCO5A1	81796	genome.wustl.edu	37	8	70585342	70585342	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030958.2	-1	reviewed	p.R770Q	0.971	131	0%	165	30.9%	1	100%	benign(0.001)	tolerated(0.34)	neutral(0.023)	superfamily_MFS_gen_substrate_transporter
SLCO5A1	81796	genome.wustl.edu	37	8	70667688	70667688	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030958.2	-1	reviewed	p.S410Y	1.000	296	0%	404	29.7%	1	0%	probably_damaging(0.972)	deleterious(0.04)	deleterious(0.763)	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter
SLCO5A1	81796	genome.wustl.edu	37	8	70744067	70744067	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030958.2	-1	reviewed	p.I281S	1.000	117	0%	234	34.6%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter
ENSG00000213003	0	genome.wustl.edu	37	8	71185729	71185729	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000391685	+1	known	p.R41C	1.000	24	0%	37	21.6%	0	-	-	-	-	HMMPfam_NAC
XKR9	389668	genome.wustl.edu	37	8	71593384	71593384	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001011720.1	+1	provisional	p.R31	0.024	310	0%	396	30.8%	0	-	-	-	-	HMMPfam_XK-related
EYA1	2138	genome.wustl.edu	37	8	72127625	72127625	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000503.4	-1	reviewed	p.I532L	1.000	134	0.7%	94	19.1%	0	-	benign(0.419)	deleterious(0.01)	deleterious(0.542)	HMMPfam_Hydrolase
MSC	9242	genome.wustl.edu	37	8	72754929	72754929	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005098.3	-1	reviewed	p.S196	0.168	193	0%	275	34.2%	19	0%	-	-	-	NULL
TRPA1	8989	genome.wustl.edu	37	8	72948539	72948539	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007332.2	-1	reviewed	p.L847V	0.797	107	0%	76	38.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans
ENSG00000235531	0	genome.wustl.edu	37	8	72966215	72966215	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000457356	+1	known	NULL	0.000	22	0%	24	33.3%	2	0%	-	-	-	-
LOC392232	392232	genome.wustl.edu	37	8	73137539	73137539	+	RNA	SNP	G	G	A	rs188563849	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_037363.2	-1	model	NULL	0.935	79	0%	39	41%	0	-	-	-	-	-
LOC392232	392232	genome.wustl.edu	37	8	73150371	73150371	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_037363.2	-1	model	NULL	0.998	148	0%	177	24.3%	0	-	-	-	-	-
KCNB2	9312	genome.wustl.edu	37	8	73849015	73849015	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004770.2	+1	reviewed	p.S475	0.000	58	0%	53	28.3%	0	-	-	-	-	HMMPfam_Kv2channel
TERF1	7013	genome.wustl.edu	37	8	73937114	73937114	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017489.2	+1	reviewed	p.F228V	0.989	253	0%	382	39.5%	10	30%	probably_damaging(0.998)	tolerated(0.07)	deleterious(0.793)	HMMPfam_TRF,superfamily_Telomeric repeat binding factor (TRF) dimerisation domain
RPL7	6129	genome.wustl.edu	37	8	74205017	74205017	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000971.3	-1	reviewed	p.E10	0.996	98	0%	127	37%	944	44.7%	-	-	-	NULL
UBE2W	55284	genome.wustl.edu	37	8	74742625	74742625	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001481.1	-1	validated	p.S44*	1.000	132	0%	174	27%	9	33.3%	-	-	-	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like
LOC100287016	100287016	genome.wustl.edu	37	8	74897004	74897004	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342849.1	+1	model	p.E93*	1.000	69	0%	161	31.1%	0	-	-	-	-	HMMPfam_Cofilin_ADF,superfamily_Actin depolymerizing proteins
JPH1	56704	genome.wustl.edu	37	8	75171630	75171630	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020647.2	-1	reviewed	p.F416L	1.000	52	0%	41	19.5%	0	-	possibly_damaging(0.906)	tolerated(0.1)	deleterious(0.646)	NULL
JPH1	56704	genome.wustl.edu	37	8	75227385	75227385	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020647.2	-1	reviewed	p.E284K	1.000	164	0%	220	31.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MORN,HMMSmart_SM00698,superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
PI15	51050	genome.wustl.edu	37	8	75761361	75761361	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015886.3	+1	reviewed	p.W217*	1.000	291	0%	313	31.6%	0	-	-	-	-	HMMSmart_SCP,superfamily_SCP-like_extracellular,PatternScan_CRISP_2
ZFHX4	79776	genome.wustl.edu	37	8	77617508	77617508	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024721.4	+1	validated	p.P395	1.000	138	0%	140	37.9%	0	-	-	-	-	NULL
ZFHX4	79776	genome.wustl.edu	37	8	77763411	77763411	+	Nonsense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024721.4	+1	validated	p.Y1373*	1.000	91	0%	107	19.6%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZFHX4	79776	genome.wustl.edu	37	8	77764227	77764227	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024721.4	+1	validated	p.S1645	1.000	285	0%	401	35.4%	0	-	-	-	-	NULL
ZFHX4	79776	genome.wustl.edu	37	8	77765537	77765537	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024721.4	+1	validated	p.S2082Y	0.998	133	0%	168	28.6%	0	-	probably_damaging(0.959)	-	-	superfamily_Homeodomain-like
ZFHX4	79776	genome.wustl.edu	37	8	77768353	77768353	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024721.4	+1	validated	p.R3021C	1.000	55	0%	70	34.3%	1	0%	probably_damaging(1)	-	-	NULL
ZFHX4	79776	genome.wustl.edu	37	8	77776551	77776551	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024721.4	+1	validated	p.S3489Y	1.000	288	0%	226	35.4%	1	100%	probably_damaging(0.996)	-	-	NULL
ZBTB10	65986	genome.wustl.edu	37	8	81411875	81411875	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105539.1	+1	validated	p.K373N	1.000	112	0%	122	35.2%	2	50%	probably_damaging(0.993)	deleterious(0.02)	deleterious(0.833)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
PAG1	55824	genome.wustl.edu	37	8	81897467	81897467	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018440.3	-1	reviewed	p.S140	0.000	96	0%	133	34.6%	0	-	-	-	-	NULL
FABP5	2171	genome.wustl.edu	37	8	82196118	82196118	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001444.1	+1	reviewed	p.N88S	0.001	539	0%	695	36%	154	33.7%	benign(0)	tolerated(0.15)	neutral(0.241)	HMMPfam_Lipocalin,superfamily_Lipocalins
IMPA1	3612	genome.wustl.edu	37	8	82583270	82583270	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144878.1	-1	reviewed	p.S216Y	0.932	94	0%	131	34.4%	3	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Inositol_P,superfamily_Carbohydrate phosphatase
ZFAND1	79752	genome.wustl.edu	37	8	82627048	82627048	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024699.2	-1	validated	p.D117Y	1.000	170	0%	214	30.8%	22	45.4%	benign(0.003)	deleterious(0.02)	neutral(0.383)	NULL
LRRCC1	85444	genome.wustl.edu	37	8	86021837	86021837	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033402.4	+1	validated	p.E38K	1.000	110	0%	106	28.3%	0	-	benign(0.119)	tolerated(0.09)	neutral(0.306)	superfamily_Outer arm dynein light chain 1
CA13	377677	genome.wustl.edu	37	8	86163043	86163043	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198584.2	+1	validated	p.E38*	1.000	106	0%	194	29.4%	0	-	-	-	-	HMMPfam_Carb_anhydrase,superfamily_Euk_COanhd
CA13	377677	genome.wustl.edu	37	8	86193471	86193471	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198584.2	+1	validated	p.R228C	1.000	92	0%	98	30.6%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Carb_anhydrase,superfamily_Euk_COanhd
CA1	759	genome.wustl.edu	37	8	86250505	86250505	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128829.2	-1	reviewed	p.F71V	0.950	466	0.2%	491	32.2%	0	-	benign(0.325)	tolerated(0.28)	neutral(0.133)	HMMPfam_Carb_anhydrase,superfamily_Euk_COanhd
ENSG00000237029	0	genome.wustl.edu	37	8	86556125	86556125	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000456858	-1	known	p.R192Q	0.011	74	0%	150	9.3%	0	-	-	-	-	NULL
PSKH2	85481	genome.wustl.edu	37	8	87060713	87060713	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033126.1	-1	provisional	p.S379L	0.724	64	0%	77	37.7%	0	-	possibly_damaging(0.706)	deleterious(0.02)	deleterious(0.637)	NULL
ATP6V0D2	245972	genome.wustl.edu	37	8	87151852	87151852	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152565.1	+1	validated	p.E157K	1.000	142	0%	156	26.3%	1	0%	possibly_damaging(0.477)	deleterious(0)	deleterious(0.602)	HMMPfam_vATP-synt_AC39,superfamily_ATPase_V0/A0_c/d
ATP6V0D2	245972	genome.wustl.edu	37	8	87165172	87165172	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152565.1	+1	validated	p.R340Q	1.000	246	0.4%	309	28.8%	0	-	probably_damaging(0.975)	deleterious(0.01)	deleterious(0.823)	HMMPfam_vATP-synt_AC39,superfamily_ATPase_V0/A0_c/d
SLC7A13	157724	genome.wustl.edu	37	8	87226839	87226839	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138817.2	-1	validated	p.D406N	0.000	87	0%	82	30.5%	0	-	benign(0.001)	deleterious(0.01)	neutral(0.406)	NULL
WWP1	11059	genome.wustl.edu	37	8	87393047	87393047	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007013.3	+1	validated	p.K55Q	1.000	144	0%	278	29.9%	8	62.5%	probably_damaging(0.956)	tolerated(0.13)	deleterious(0.652)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
FAM82B	51115	genome.wustl.edu	37	8	87487150	87487150	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016033.2	-1	validated	p.L265I	0.997	319	0%	466	32.8%	34	44.1%	benign(0.042)	tolerated(0.08)	neutral(0.302)	superfamily_Prenyl_trans
CPNE3	8895	genome.wustl.edu	37	8	87549795	87549795	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003909.3	+1	reviewed	p.L155R	0.999	153	0%	248	35.5%	8	62.5%	possibly_damaging(0.816)	deleterious(0)	deleterious(0.753)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
CPNE3	8895	genome.wustl.edu	37	8	87558846	87558846	+	Missense_Mutation	SNP	G	G	T	rs41333046	byCluster;byFrequency;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003909.3	+1	reviewed	p.E252D	0.980	218	0%	298	27.9%	9	44.4%	benign(0.122)	deleterious(0.02)	neutral(0.393)	superfamily_C2_CaLB
CNGB3	54714	genome.wustl.edu	37	8	87588127	87588127	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019098.4	-1	reviewed	p.T779A	0.003	336	0%	476	32.6%	0	-	possibly_damaging(0.775)	tolerated(0.45)	neutral(0.300)	NULL
CNGB3	54714	genome.wustl.edu	37	8	87645051	87645051	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019098.4	-1	reviewed	p.L417V	0.018	112	0%	98	10.2%	0	-	benign(0.001)	tolerated(0.3)	neutral(0.029)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CNBD1	168975	genome.wustl.edu	37	8	87917398	87917398	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173538.2	+1	provisional	p.K83T	0.124	217	0%	173	27.7%	0	-	benign(0.02)	tolerated(0.2)	neutral(0.050)	NULL
CNBD1	168975	genome.wustl.edu	37	8	88249334	88249334	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173538.2	+1	provisional	p.D255E	0.000	132	0%	89	32.6%	0	-	possibly_damaging(0.842)	tolerated(1)	neutral(0.322)	superfamily_cNMP_binding
DCAF4L2	138009	genome.wustl.edu	37	8	88885184	88885184	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152418.3	-1	validated	p.R339I	0.289	196	0%	135	29.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_WD40,superfamily_WD40_like
DCAF4L2	138009	genome.wustl.edu	37	8	88885505	88885505	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152418.3	-1	validated	p.F232S	0.097	256	0%	323	32.8%	0	-	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	superfamily_WD40_like
MMP16	4325	genome.wustl.edu	37	8	89081712	89081712	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022564.3	-1	reviewed	p.L421F	0.001	268	0.4%	208	27.9%	0	-	-	-	-	NULL
MMP16	4325	genome.wustl.edu	37	8	89131040	89131040	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005941.4	-1	reviewed	p.L254V	0.211	234	0%	174	35.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	"HMMPfam_Peptidase_M10,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain"
RIPK2	8767	genome.wustl.edu	37	8	90802519	90802519	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003821.5	+1	reviewed	p.E500*	1.000	113	0%	142	38%	55	34.5%	-	-	-	HMMPfam_CARD,superfamily_DEATH domain
NBN	4683	genome.wustl.edu	37	8	90958385	90958385	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002485.4	-1	reviewed	p.F685V	1.000	288	0%	297	40.1%	18	27.7%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_Nbs1_C
NBN	4683	genome.wustl.edu	37	8	90994993	90994993	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002485.4	-1	reviewed	p.R43Q	1.000	114	0%	180	35.6%	6	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FHA,HMMSmart_SM00240,superfamily_SMAD/FHA domain
TMEM64	169200	genome.wustl.edu	37	8	91643785	91643785	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008495.3	-1	validated	p.L316I	1.000	78	0%	82	37.8%	11	45.4%	possibly_damaging(0.495)	tolerated(0.31)	neutral(0.192)	NULL
TMEM64	169200	genome.wustl.edu	37	8	91657344	91657344	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008495.3	-1	validated	p.F264L	1.000	28	0%	54	37%	16	62.5%	probably_damaging(0.996)	tolerated(0.16)	deleterious(0.521)	HMMPfam_SNARE_assoc
NECAB1	64168	genome.wustl.edu	37	8	91937858	91937858	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022351.4	+1	validated	p.S197N	1.000	160	0%	191	25.1%	0	-	benign(0)	tolerated(0.47)	neutral(0.011)	NULL
LRRC69	100130742	genome.wustl.edu	37	8	92145396	92145396	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001129890.1	+1	provisional	p.E148*	0.990	80	0%	71	25.4%	0	-	-	-	-	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like
SLC26A7	115111	genome.wustl.edu	37	8	92261899	92261899	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_134266.1	+1	reviewed	p.K7I	1.000	104	0%	114	27.2%	0	-	possibly_damaging(0.806)	deleterious(0)	deleterious(0.748)	NULL
RUNX1T1	862	genome.wustl.edu	37	8	93003954	93003954	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175634.1	-1	reviewed	p.L302V	1.000	360	0%	449	31.6%	0	-	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	NULL
RUNX1T1	862	genome.wustl.edu	37	8	93023320	93023320	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175634.1	-1	reviewed	e4-1	1.000	148	0%	170	34.1%	0	-	-	-	-	-
RBM12B	389677	genome.wustl.edu	37	8	94747056	94747056	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203390.2	-1	validated	p.R528I	0.080	125	0%	184	33.7%	12	66.6%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
TMEM67	91147	genome.wustl.edu	37	8	94815888	94815888	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153704.5	+1	reviewed	p.F766	0.889	359	0%	573	31.2%	5	20%	-	-	-	HMMPfam_Meckelin
CDH17	1015	genome.wustl.edu	37	8	95172237	95172237	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144663.1	-1	reviewed	p.D505N	1.000	276	0%	301	28.9%	0	-	possibly_damaging(0.817)	tolerated(0.21)	neutral(0.353)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
CDH17	1015	genome.wustl.edu	37	8	95182638	95182638	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144663.1	-1	reviewed	p.E351D	1.000	217	0%	193	21.8%	0	-	probably_damaging(0.975)	tolerated(0.09)	deleterious(0.714)	HMMPfam_Cadherin,superfamily_Cadherin-like
GEM	2669	genome.wustl.edu	37	8	95264372	95264372	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005261.3	-1	reviewed	p.A163V	0.995	72	0%	75	26.7%	34	0%	benign(0.012)	tolerated(0.16)	neutral(0.060)	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
GEM	2669	genome.wustl.edu	37	8	95272565	95272565	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005261.3	-1	reviewed	p.R56Q	1.000	203	0%	330	29.7%	31	0%	benign(0.064)	tolerated(0.6)	neutral(0.009)	NULL
RAD54B	25788	genome.wustl.edu	37	8	95406084	95406084	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012415.2	-1	reviewed	p.E469*	1.000	116	0%	90	34.4%	1	0%	-	-	-	HMMPfam_SNF2_N,HMMSmart_DEXDc,superfamily_SSF52540
RAD54B	25788	genome.wustl.edu	37	8	95470577	95470577	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012415.2	-1	reviewed	p.E75*	0.035	252	0%	289	28%	1	0%	-	-	-	NULL
KIAA1429	25962	genome.wustl.edu	37	8	95523551	95523551	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015496.3	-1	validated	p.E1084D	1.000	36	0%	62	40.3%	14	42.8%	probably_damaging(0.987)	tolerated(0.26)	deleterious(0.471)	NULL
ESRP1	54845	genome.wustl.edu	37	8	95680418	95680418	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017697.3	+1	validated	p.K391N	0.998	99	0%	137	33.6%	82	41.4%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
ESRP1	54845	genome.wustl.edu	37	8	95709089	95709089	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017697.3	+1	validated	p.E661K	1.000	304	0%	473	33.4%	52	38.4%	possibly_damaging(0.575)	tolerated(0.09)	deleterious(0.493)	NULL
INTS8	55656	genome.wustl.edu	37	8	95837220	95837220	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017864.2	+1	provisional	p.R77I	1.000	107	0%	218	35.3%	6	33.3%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	NULL
INTS8	55656	genome.wustl.edu	37	8	95886790	95886790	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017864.2	+1	provisional	p.R883Q	1.000	194	0.5%	258	34.5%	29	13.7%	benign(0.301)	tolerated(0.06)	neutral(0.415)	NULL
C8orf37	157657	genome.wustl.edu	37	8	96276000	96276000	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177965.2	-1	predicted	p.S53L	0.996	193	0%	157	45.2%	1	0%	benign(0.009)	tolerated(0.06)	neutral(0.323)	NULL
GDF6	392255	genome.wustl.edu	37	8	97157009	97157009	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001557.2	-1	reviewed	p.E384K	1.000	160	0%	241	24.1%	0	-	benign(0.401)	deleterious(0)	deleterious(0.574)	HMMPfam_TGF_beta,HMMSmart_TGFB,PatternScan_TGF_BETA_1,superfamily_SSF57501
UQCRB	7381	genome.wustl.edu	37	8	97245421	97245421	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006294.3	-1	reviewed	p.R18	0.979	188	0%	277	37.5%	586	39%	-	-	-	HMMPfam_UCR_14kD,superfamily_14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
MTERFD1	51001	genome.wustl.edu	37	8	97256275	97256275	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015942.3	-1	provisional	p.E311K	1.000	357	0%	444	32.2%	25	44%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_mTERF
PTDSS1	9791	genome.wustl.edu	37	8	97285595	97285595	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014754.1	+1	provisional	p.I83S	1.000	489	0%	773	34.8%	27	59.2%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
PTDSS1	9791	genome.wustl.edu	37	8	97316364	97316364	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014754.1	+1	provisional	p.S283	0.997	249	0%	372	33.3%	44	45.4%	-	-	-	HMMPfam_PSS
SDC2	6383	genome.wustl.edu	37	8	97614720	97614720	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002998.3	+1	reviewed	p.T90	0.677	133	0%	226	31.4%	89	31.4%	-	-	-	HMMPfam_Syndecan
C8orf47	203111	genome.wustl.edu	37	8	99101455	99101455	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173549.2	+1	validated	p.E70	0.072	50	0%	125	30.4%	0	-	-	-	-	NULL
C8orf47	203111	genome.wustl.edu	37	8	99101900	99101900	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173549.2	+1	validated	p.E219*	0.002	30	0%	44	29.5%	0	-	-	-	-	NULL
POP1	10940	genome.wustl.edu	37	8	99142311	99142311	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015029.2	+1	reviewed	p.K198E	1.000	86	0%	107	35.5%	5	40%	possibly_damaging(0.95)	tolerated(0.16)	neutral(0.453)	HMMPfam_POP1
NIPAL2	79815	genome.wustl.edu	37	8	99248397	99248397	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024759.1	-1	provisional	p.A141V	0.998	140	0%	155	39.4%	0	-	possibly_damaging(0.527)	tolerated(0.49)	neutral(0.189)	HMMPfam_DUF803,superfamily_SSF103481
KCNS2	3788	genome.wustl.edu	37	8	99441463	99441463	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020697.2	+1	provisional	p.R419H	1.000	95	0%	149	25.5%	0	-	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	superfamily_Voltage-gated potassium channels
STK3	6788	genome.wustl.edu	37	8	99779497	99779497	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006281.2	-1	validated	p.E70D	1.000	196	0%	284	34.9%	5	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
STK3	6788	genome.wustl.edu	37	8	99786981	99786981	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006281.2	-1	validated	p.E31D	1.000	194	0%	254	28.7%	6	0%	benign(0.364)	tolerated(0.08)	neutral(0.416)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
VPS13B	157680	genome.wustl.edu	37	8	100147932	100147932	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017890.3	+1	reviewed	p.E512*	1.000	237	0%	265	33.6%	3	0%	-	-	-	NULL
VPS13B	157680	genome.wustl.edu	37	8	100847455	100847455	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017890.3	+1	reviewed	p.L3240	0.984	61	0%	83	32.5%	0	-	-	-	-	NULL
VPS13B	157680	genome.wustl.edu	37	8	100871590	100871590	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017890.3	+1	reviewed	p.I3667	0.015	156	0%	162	48.8%	1	0%	-	-	-	NULL
RGS22	26166	genome.wustl.edu	37	8	101054038	101054038	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015668.3	-1	validated	p.E644*	0.994	225	0%	340	32.6%	0	-	-	-	-	NULL
RGS22	26166	genome.wustl.edu	37	8	101075840	101075840	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015668.3	-1	validated	p.S386R	0.922	360	0%	427	30.9%	0	-	benign(0.406)	tolerated(0.13)	neutral(0.383)	NULL
RGS22	26166	genome.wustl.edu	37	8	101083615	101083615	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015668.3	-1	validated	p.F192	1.000	256	0%	306	32.7%	0	-	-	-	-	NULL
FBXO43	286151	genome.wustl.edu	37	8	101152971	101152971	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029860.2	-1	validated	p.R504I	1.000	130	0%	162	29%	0	-	probably_damaging(0.978)	deleterious(0.04)	deleterious(0.769)	HMMPfam_F-box
FBXO43	286151	genome.wustl.edu	37	8	101153093	101153093	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029860.2	-1	validated	p.G463	0.002	213	0%	351	26.2%	1	0%	-	-	-	NULL
FBXO43	286151	genome.wustl.edu	37	8	101153456	101153456	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029860.2	-1	validated	p.E342D	0.961	117	0%	226	36.7%	0	-	benign(0)	tolerated(1)	-	NULL
FBXO43	286151	genome.wustl.edu	37	8	101154286	101154286	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029860.2	-1	validated	p.D66N	0.399	49	0%	51	29.4%	1	0%	possibly_damaging(0.757)	tolerated(0.2)	neutral(0.329)	NULL
SPAG1	6674	genome.wustl.edu	37	8	101190137	101190137	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003114.3	+1	reviewed	p.R132C	1.000	156	0%	239	31.4%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SPAG1	6674	genome.wustl.edu	37	8	101243442	101243442	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003114.3	+1	reviewed	p.N638	0.965	110	0%	118	33.9%	4	75%	-	-	-	HMMSmart_SM00028,superfamily_Protein prenylyltransferase
SPAG1	6674	genome.wustl.edu	37	8	101243501	101243501	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003114.3	+1	reviewed	p.A658V	1.000	75	0%	69	30.4%	9	66.6%	benign(0.022)	deleterious(0.01)	neutral(0.407)	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_Protein prenylyltransferase
SPAG1	6674	genome.wustl.edu	37	8	101252864	101252864	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003114.3	+1	reviewed	p.P838	0.000	151	0%	153	32.7%	3	100%	-	-	-	NULL
PABPC1	26986	genome.wustl.edu	37	8	101718929	101718929	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002568.3	-1	validated	p.R518C	1.000	97	0%	147	29.3%	1864	36.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_PABC (PABP) domain
UBR5	51366	genome.wustl.edu	37	8	103307683	103307683	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015902.4	-1	reviewed	p.R1297Q	1.000	183	0.5%	128	32%	10	30%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	NULL
UBR5	51366	genome.wustl.edu	37	8	103323586	103323586	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015902.4	-1	reviewed	p.N853H	1.000	93	0%	104	35.6%	3	66.6%	possibly_damaging(0.855)	tolerated(0.12)	deleterious(0.591)	NULL
UBR5	51366	genome.wustl.edu	37	8	103340027	103340027	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015902.4	-1	reviewed	p.S475Y	1.000	163	0%	260	29.2%	7	42.8%	possibly_damaging(0.855)	deleterious(0)	deleterious(0.774)	NULL
FZD6	8323	genome.wustl.edu	37	8	104340620	104340620	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003506.3	+1	reviewed	p.F506C	1.000	241	0%	239	31.4%	6	50%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Frizzled
DCAF13	25879	genome.wustl.edu	37	8	104439464	104439464	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015420.6	+1	validated	p.K355T	1.000	172	0%	229	29.7%	44	43.1%	possibly_damaging(0.78)	deleterious(0.01)	deleterious(0.697)	HMMSmart_WD40,superfamily_WD40_like
RIMS2	9699	genome.wustl.edu	37	8	104924317	104924317	+	Missense_Mutation	SNP	C	C	T	rs141316868	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100117.1	+1	validated	p.R577C	1.000	169	0%	190	34.2%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_PDZ domain-like
TM7SF4	81501	genome.wustl.edu	37	8	105367240	105367240	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030788.2	+1	reviewed	p.M389L	0.001	260	0%	285	27%	0	-	benign(0)	tolerated(0.35)	neutral(0.021)	HMMPfam_DC_STAMP
DPYS	1807	genome.wustl.edu	37	8	105405061	105405061	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001385.2	-1	reviewed	p.R465Q	0.998	137	0%	134	35.8%	0	-	probably_damaging(0.954)	deleterious(0.04)	deleterious(0.746)	superfamily_Metalo_hydrolase
ZFPM2	23414	genome.wustl.edu	37	8	106813313	106813313	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012082.3	+1	reviewed	p.L335I	1.000	149	0%	174	37.9%	1	0%	probably_damaging(0.99)	tolerated(0.14)	deleterious(0.691)	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZFPM2	23414	genome.wustl.edu	37	8	106813886	106813886	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012082.3	+1	reviewed	p.R526W	0.983	50	0%	54	38.9%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
OXR1	55074	genome.wustl.edu	37	8	107752593	107752593	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018002.2	+1	validated	p.R702I	1.000	170	0%	194	27.3%	15	33.3%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMSmart_SM00584
TRHR	7201	genome.wustl.edu	37	8	110131635	110131635	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003301.4	+1	reviewed	p.S383Y	0.973	82	0%	41	36.6%	0	-	benign(0.397)	tolerated(0.1)	neutral(0.414)	NULL
NUDCD1	84955	genome.wustl.edu	37	8	110293400	110293400	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032869.3	-1	validated	p.E275D	1.000	144	0%	174	33.9%	11	18.1%	benign(0)	tolerated(0.61)	neutral(0.004)	superfamily_HSP20-like chaperones
PKHD1L1	93035	genome.wustl.edu	37	8	110416920	110416920	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177531.4	+1	validated	p.S504L	0.994	164	0%	179	36.3%	0	-	possibly_damaging(0.643)	tolerated(0.1)	deleterious(0.512)	NULL
PKHD1L1	93035	genome.wustl.edu	37	8	110442244	110442244	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177531.4	+1	validated	p.V1069	0.033	278	0%	384	38%	0	-	-	-	-	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains
PKHD1L1	93035	genome.wustl.edu	37	8	110463270	110463270	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177531.4	+1	validated	p.T2081I	0.004	120	0%	135	37%	0	-	benign(0.093)	tolerated(0.5)	neutral(0.017)	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains
PKHD1L1	93035	genome.wustl.edu	37	8	110503228	110503228	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177531.4	+1	validated	p.R3338*	0.998	214	0%	130	33.1%	0	-	-	-	-	superfamily_Pectin lyase-like
PKHD1L1	93035	genome.wustl.edu	37	8	110519970	110519970	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177531.4	+1	validated	p.S3691	1.000	179	0%	132	34.1%	0	-	-	-	-	NULL
SYBU	55638	genome.wustl.edu	37	8	110587490	110587490	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099744.1	-1	validated	p.R546I	0.014	76	0%	62	30.6%	3	66.6%	benign(0.128)	tolerated(0.17)	neutral(0.069)	NULL
CSMD3	114788	genome.wustl.edu	37	8	113253987	113253987	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198123.1	-1	validated	p.P3477H	0.554	183	0%	102	28.4%	0	-	possibly_damaging(0.902)	tolerated(0.07)	deleterious(0.676)	NULL
CSMD3	114788	genome.wustl.edu	37	8	113276013	113276013	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198123.1	-1	validated	p.I3239	1.000	132	0%	131	29%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD3	114788	genome.wustl.edu	37	8	113314116	113314116	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198123.1	-1	validated	p.I2782	0.994	250	0%	238	26.1%	0	-	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD3	114788	genome.wustl.edu	37	8	113364662	113364662	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198123.1	-1	validated	p.Q2080K	1.000	141	0%	154	32.5%	0	-	probably_damaging(0.972)	tolerated(0.13)	deleterious(0.666)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CSMD3	114788	genome.wustl.edu	37	8	113392594	113392594	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198123.1	-1	validated	p.H2041	1.000	173	0%	172	32%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD3	114788	genome.wustl.edu	37	8	113697859	113697859	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198123.1	-1	validated	p.S753Y	1.000	143	0.7%	113	33.6%	0	-	unknown(0)	deleterious(0.03)	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CSMD3	114788	genome.wustl.edu	37	8	113702126	113702126	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198123.1	-1	validated	p.Q709P	1.000	239	0%	213	28.6%	0	-	unknown(0)	deleterious(0.04)	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
TRPS1	7227	genome.wustl.edu	37	8	116616419	116616419	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014112.2	-1	reviewed	p.E593*	1.000	180	0%	178	25.8%	4	0%	-	-	-	NULL
TRPS1	7227	genome.wustl.edu	37	8	116616594	116616594	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014112.2	-1	reviewed	p.T534	0.864	170	0%	143	27.3%	1	0%	-	-	-	NULL
TRPS1	7227	genome.wustl.edu	37	8	116617112	116617112	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014112.2	-1	reviewed	p.E362K	1.000	251	0%	282	32.6%	1	0%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMSmart_ZnF_C2H2
UTP23	84294	genome.wustl.edu	37	8	117783964	117783964	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032334.2	+1	validated	p.K211N	1.000	45	0%	60	40%	5	20%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
RAD21	5885	genome.wustl.edu	37	8	117861241	117861241	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006265.2	-1	reviewed	p.D550Y	1.000	316	0%	289	31.1%	63	33.3%	probably_damaging(0.958)	deleterious(0.01)	deleterious(0.807)	NULL
RAD21	5885	genome.wustl.edu	37	8	117878883	117878883	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006265.2	-1	reviewed	p.K29T	1.000	80	0%	68	35.3%	18	27.7%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Rad21_Rec8_N
SLC30A8	169026	genome.wustl.edu	37	8	118159330	118159330	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173851.2	+1	reviewed	p.A70V	1.000	167	0%	136	29.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
EXT1	2131	genome.wustl.edu	37	8	119122723	119122723	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000127.2	-1	reviewed	p.R188M	1.000	73	0%	100	33%	6	16.6%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	HMMPfam_Exostosin
TNFRSF11B	4982	genome.wustl.edu	37	8	119936821	119936821	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002546.3	-1	reviewed	p.R333Q	0.997	332	0%	399	26.6%	1	0%	probably_damaging(0.982)	tolerated(0.3)	neutral(0.455)	HMMPfam_Death,HMMSmart_SM00005,superfamily_DEATH domain
TNFRSF11B	4982	genome.wustl.edu	37	8	119941102	119941102	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002546.3	-1	reviewed	p.S156Y	0.976	358	0%	373	31.6%	0	-	probably_damaging(0.992)	deleterious(0.05)	deleterious(0.793)	HMMSmart_SM00208,superfamily_TNF receptor-like
NOV	4856	genome.wustl.edu	37	8	120429016	120429016	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002514.3	+1	reviewed	p.C39	0.997	33	0%	37	48.6%	0	-	-	-	-	HMMPfam_IGFBP,HMMSmart_IB
ENPP2	5168	genome.wustl.edu	37	8	120575158	120575158	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006209.3	-1	reviewed	p.G839V	1.000	129	0%	215	39.1%	29	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Endonuclease_NS,HMMSmart_SM00477,superfamily_His-Me finger endonucleases
ENPP2	5168	genome.wustl.edu	37	8	120631537	120631537	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006209.3	-1	reviewed	p.S142	0.318	195	0%	207	29%	7	0%	-	-	-	HMMPfam_Somatomedin_B,HMMSmart_SM00201
ENPP2	5168	genome.wustl.edu	37	8	120650739	120650739	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006209.3	-1	reviewed	p.G21E	0.954	188	0%	240	35.4%	2	0%	possibly_damaging(0.829)	deleterious(0)	deleterious(0.759)	NULL
TAF2	6873	genome.wustl.edu	37	8	120814204	120814204	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003184.3	-1	reviewed	p.V208L	1.000	134	0%	211	27.5%	1	0%	probably_damaging(0.958)	tolerated(0.09)	deleterious(0.698)	HMMPfam_Peptidase_M1,superfamily_SSF63737
COL14A1	7373	genome.wustl.edu	37	8	121180405	121180405	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021110.1	+1	validated	p.D119Y	1.000	81	0%	75	33.3%	2	0%	probably_damaging(0.964)	deleterious(0.02)	deleterious(0.789)	NULL
MTBP	27085	genome.wustl.edu	37	8	121519076	121519076	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022045.3	+1	provisional	p.L620I	1.000	166	0%	128	25%	4	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
HAS2	3037	genome.wustl.edu	37	8	122627007	122627007	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005328.2	-1	reviewed	p.S334F	1.000	171	0%	210	31%	4	25%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_SSF53448
WDR67	93594	genome.wustl.edu	37	8	124089350	124089350	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145647.3	+1	validated	e2-1	1.000	218	0%	303	32%	0	-	-	-	-	-
WDR67	93594	genome.wustl.edu	37	8	124096440	124096440	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145647.3	+1	validated	p.S127A	0.969	157	0%	330	36.1%	0	-	benign(0.282)	tolerated(0.55)	neutral(0.093)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
ZHX1	11244	genome.wustl.edu	37	8	124265726	124265726	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017926.1	-1	reviewed	p.R821	1.000	246	0%	274	34.7%	9	55.5%	-	-	-	HMMSmart_HOX,superfamily_Homeodomain_like
ZHX1	11244	genome.wustl.edu	37	8	124267679	124267679	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017926.1	-1	reviewed	p.E170*	0.898	128	0%	141	34%	2	0%	-	-	-	NULL
ZHX1	11244	genome.wustl.edu	37	8	124267871	124267871	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017926.1	-1	reviewed	p.E106K	0.982	157	0%	223	34.5%	3	66.6%	probably_damaging(0.998)	tolerated(0.15)	deleterious(0.716)	HMMSmart_ZnF_C2H2
FBXO32	114907	genome.wustl.edu	37	8	124547024	124547024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_058229.2	-1	reviewed	p.E49D	1.000	413	0%	534	35.6%	23	4.3%	probably_damaging(0.975)	tolerated(0.27)	neutral(0.451)	NULL
KLHL38	340359	genome.wustl.edu	37	8	124664722	124664722	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001081675.2	-1	validated	p.E149K	0.983	49	0%	47	40.4%	0	-	benign(0.001)	tolerated(0.69)	neutral(0.002)	HMMPfam_BACK
FER1L6	654463	genome.wustl.edu	37	8	124989810	124989810	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039112.2	+1	validated	p.D342Y	1.000	131	0%	184	31.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
FER1L6	654463	genome.wustl.edu	37	8	125015536	125015536	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039112.2	+1	validated	p.P550H	0.189	52	0%	41	31.7%	0	-	possibly_damaging(0.502)	deleterious(0.01)	deleterious(0.573)	NULL
FER1L6	654463	genome.wustl.edu	37	8	125072866	125072866	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039112.2	+1	validated	p.C1021	0.996	272	0%	344	30.5%	0	-	-	-	-	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
FER1L6	654463	genome.wustl.edu	37	8	125109590	125109590	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039112.2	+1	validated	p.R1592*	0.996	115	0%	96	27.1%	0	-	-	-	-	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
TRMT12	55039	genome.wustl.edu	37	8	125463271	125463271	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017956.3	+1	validated	p.E35*	0.988	145	0%	247	30%	5	40%	-	-	-	NULL
RNF139	11236	genome.wustl.edu	37	8	125487357	125487358	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007218.3	+1	reviewed	p.V4fs	1.000:1.000	-	-	-	-	-	-	-	-	-	NULL
TATDN1	83940	genome.wustl.edu	37	8	125516547	125516547	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032026.3	-1	validated	p.L186F	0.985	101	0%	189	25.9%	31	45.1%	benign(0.002)	tolerated(0.09)	neutral(0.296)	HMMPfam_TatD_DNase,superfamily_Metallo-dependent hydrolases
ZNF572	137209	genome.wustl.edu	37	8	125989469	125989469	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152412.2	+1	validated	p.R320I	0.980	77	0%	96	30.2%	0	-	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF572	137209	genome.wustl.edu	37	8	125989485	125989485	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152412.2	+1	validated	p.E325D	1.000	79	0%	123	34.1%	0	-	possibly_damaging(0.723)	deleterious(0.04)	deleterious(0.611)	superfamily_SSF57667
SQLE	6713	genome.wustl.edu	37	8	126033040	126033040	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003129.3	+1	reviewed	p.L487I	1.000	299	0%	281	25.3%	46	43.4%	probably_damaging(0.992)	deleterious(0.03)	deleterious(0.812)	HMMPfam_SE,superfamily_SSF51905
KIAA0196	9897	genome.wustl.edu	37	8	126061251	126061251	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014846.3	-1	reviewed	p.T792	0.974	133	0%	134	32.1%	16	31.2%	-	-	-	HMMPfam_Strumpellin
KIAA0196	9897	genome.wustl.edu	37	8	126075832	126075832	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014846.3	-1	reviewed	p.S447L	1.000	193	0%	252	36.9%	15	40%	benign(0.138)	tolerated(0.65)	neutral(0.014)	HMMPfam_Strumpellin
KIAA0196	9897	genome.wustl.edu	37	8	126091037	126091037	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014846.3	-1	reviewed	p.N218	0.971	234	0%	378	30.7%	5	20%	-	-	-	HMMPfam_Strumpellin
TRIB1	10221	genome.wustl.edu	37	8	126448483	126448483	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025195.2	+1	validated	p.R297W	1.000	166	0%	204	35.3%	13	46.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
GSDMC	56169	genome.wustl.edu	37	8	130788400	130788400	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031415.2	-1	validated	p.E118K	0.000	257	0%	358	29.6%	0	-	benign(0.011)	tolerated(0.19)	neutral(0.050)	HMMPfam_Gasdermin
ASAP1	50807	genome.wustl.edu	37	8	131140288	131140288	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018482.2	-1	validated	p.A422	0.992	181	0%	262	38.2%	4	75%	-	-	-	superfamily_SSF50729
ASAP1	50807	genome.wustl.edu	37	8	131414152	131414152	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018482.2	-1	validated	p.S13L	0.991	74	0%	91	38.5%	0	-	unknown(0)	-	-	NULL
ADCY8	114	genome.wustl.edu	37	8	131880098	131880098	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001115.2	-1	reviewed	p.S735Y	1.000	144	0.7%	147	38.1%	0	-	probably_damaging(0.983)	deleterious(0.04)	deleterious(0.778)	NULL
EFR3A	23167	genome.wustl.edu	37	8	132958879	132958879	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015137.3	+1	validated	p.S122Y	1.000	149	0%	101	41.6%	2	50%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	superfamily_ARM repeat
KCNQ3	3786	genome.wustl.edu	37	8	133141543	133141543	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004519.2	-1	reviewed	p.D862G	0.999	88	1.1%	92	26.1%	0	-	possibly_damaging(0.944)	deleterious(0)	deleterious(0.833)	NULL
TMEM71	137835	genome.wustl.edu	37	8	133740063	133740063	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144649.2	-1	validated	p.E200D	0.000	153	0%	218	29.4%	1	0%	benign(0.323)	tolerated(0.5)	neutral(0.111)	NULL
TMEM71	137835	genome.wustl.edu	37	8	133771118	133771118	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144649.2	-1	validated	p.R3Q	0.990	206	0%	322	28.6%	0	-	benign(0.29)	tolerated(0.38)	neutral(0.107)	NULL
PHF20L1	51105	genome.wustl.edu	37	8	133811337	133811337	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000395383	+1	known	p.F146	1.000	171	0%	76	25%	0	-	-	-	-	NULL
PHF20L1	51105	genome.wustl.edu	37	8	133844509	133844509	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016018.4	+1	validated	p.E592K	1.000	347	0%	251	31.9%	6	33.3%	benign(0.079)	tolerated(1)	neutral(0.005)	NULL
TG	7038	genome.wustl.edu	37	8	133941367	133941367	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003235.4	+1	reviewed	p.D1582	0.000	289	0%	375	35.7%	0	-	-	-	-	NULL
TG	7038	genome.wustl.edu	37	8	133981714	133981714	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003235.4	+1	reviewed	p.D1959Y	0.075	155	0%	140	30%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
TG	7038	genome.wustl.edu	37	8	133981738	133981738	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003235.4	+1	reviewed	p.R1967C	0.989	159	0%	146	39.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TG	7038	genome.wustl.edu	37	8	134030233	134030233	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003235.4	+1	reviewed	p.S2258I	1.000	27	0%	36	41.7%	0	-	benign(0.282)	deleterious(0)	deleterious(0.531)	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases
TG	7038	genome.wustl.edu	37	8	134031914	134031914	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003235.4	+1	reviewed	p.L2284I	1.000	177	0%	239	31.8%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_COesterase,PatternScan_CARBOXYLESTERASE_B_2,superfamily_alpha/beta-Hydrolases
TG	7038	genome.wustl.edu	37	8	134145713	134145713	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003235.4	+1	reviewed	e47-1	1.000	316	0%	417	33.3%	0	-	-	-	-	-
ZFAT	57623	genome.wustl.edu	37	8	135545154	135545154	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020863.3	-1	reviewed	p.Y1013S	1.000	190	0%	270	34.8%	4	0%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
FAM135B	51059	genome.wustl.edu	37	8	139144866	139144866	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015912.3	-1	validated	p.F1397L	1.000	167	1.2%	302	38.4%	0	-	benign(0.107)	tolerated(0.27)	neutral(0.042)	NULL
FAM135B	51059	genome.wustl.edu	37	8	139163990	139163990	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015912.3	-1	validated	p.D910Y	0.467	226	0%	299	31.1%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
FAM135B	51059	genome.wustl.edu	37	8	139278034	139278034	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015912.3	-1	validated	p.R70Q	0.999	133	0%	129	35.7%	0	-	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	NULL
FAM135B	51059	genome.wustl.edu	37	8	139323090	139323090	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015912.3	-1	validated	p.Q51*	1.000	63	0%	109	36.7%	0	-	-	-	-	NULL
FAM135B	51059	genome.wustl.edu	37	8	139380208	139380208	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015912.3	-1	validated	p.T7A	1.000	235	0%	324	30.6%	0	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
COL22A1	169044	genome.wustl.edu	37	8	139668162	139668162	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152888.1	-1	validated	p.G1104E	0.991	334	0%	503	33.2%	0	-	unknown(0)	tolerated(1)	-	NULL
COL22A1	169044	genome.wustl.edu	37	8	139675946	139675946	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152888.1	-1	validated	e41+2	1.000	242	0%	316	28.8%	0	-	-	-	-	-
COL22A1	169044	genome.wustl.edu	37	8	139688866	139688866	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152888.1	-1	validated	p.A1029S	0.178	79	0%	112	38.4%	0	-	unknown(0)	tolerated(0.81)	-	NULL
COL22A1	169044	genome.wustl.edu	37	8	139727975	139727975	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152888.1	-1	validated	p.E823*	0.997	120	0%	155	44.5%	1	0%	-	-	-	HMMPfam_Collagen
COL22A1	169044	genome.wustl.edu	37	8	139833563	139833563	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152888.1	-1	validated	p.S354Y	0.011	166	0%	208	38.9%	0	-	unknown(0)	deleterious(0)	-	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases
COL22A1	169044	genome.wustl.edu	37	8	139890047	139890047	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152888.1	-1	validated	p.D202N	0.998	17	0%	18	27.8%	0	-	unknown(0)	deleterious(0)	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
TRAPPC9	83696	genome.wustl.edu	37	8	141285824	141285824	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031466.5	-1	reviewed	p.K835N	0.001	205	0%	363	39.1%	17	35.2%	benign(0.032)	deleterious(0.01)	neutral(0.407)	HMMPfam_Trs120
DENND3	22898	genome.wustl.edu	37	8	142178355	142178355	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014957.2	+1	validated	p.R589Q	0.000	85	0%	140	40%	2	0%	possibly_damaging(0.868)	tolerated(0.58)	neutral(0.342)	NULL
DENND3	22898	genome.wustl.edu	37	8	142202480	142202480	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014957.2	+1	validated	p.E1064*	0.009	113	0%	219	27.4%	7	0%	-	-	-	superfamily_WD40 repeat-like
FLJ43860	389690	genome.wustl.edu	37	8	142446801	142446801	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207414.2	-1	validated	p.R1128	0.620	16	0%	18	33.3%	0	-	-	-	-	superfamily_ARM repeat
FLJ43860	389690	genome.wustl.edu	37	8	142476520	142476520	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207414.2	-1	validated	p.I822	0.002	174	0%	317	34.1%	0	-	-	-	-	superfamily_ARM repeat
FLJ43860	389690	genome.wustl.edu	37	8	142484237	142484237	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207414.2	-1	validated	p.L587	0.781	99	0%	97	39.2%	0	-	-	-	-	superfamily_ARM repeat
BAI1	575	genome.wustl.edu	37	8	143562683	143562683	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001702.2	+1	reviewed	p.R633C	1.000	48	0%	59	32.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HRM,HMMSmart_SM00008
ARC	23237	genome.wustl.edu	37	8	143694541	143694541	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015193.3	-1	validated	p.E364	0.980	18	0%	17	41.2%	0	-	-	-	-	NULL
SLURP1	57152	genome.wustl.edu	37	8	143823261	143823261	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020427.2	-1	reviewed	p.E46D	0.102	126	0%	122	39.3%	0	-	benign(0.075)	tolerated(0.64)	neutral(0.008)	HMMPfam_UPAR_LY6,HMMSmart_LU,superfamily_SSF57302
LY6D	8581	genome.wustl.edu	37	8	143866841	143866841	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003695.2	-1	validated	p.K61	0.370	68	0%	49	44.9%	4	25%	-	-	-	HMMPfam_UPAR_LY6,HMMSmart_SM00134,PatternScan_LY6_UPAR,superfamily_Snake toxin-like
CYP11B2	1585	genome.wustl.edu	37	8	143996298	143996298	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000498.3	-1	reviewed	p.R208W	1.000	70	0%	92	26.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_p450,superfamily_Cytochrome P450
TOP1MT	116447	genome.wustl.edu	37	8	144413487	144413487	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052963.1	-1	reviewed	p.D49Y	0.912	66	0%	98	30.6%	3	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_TopoI_DNA_bd_euk
ZC3H3	23144	genome.wustl.edu	37	8	144550620	144550620	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015117.2	-1	validated	p.F679	0.567	40	0%	60	33.3%	36	47.2%	-	-	-	HMMPfam_zf-CCCH,HMMSmart_SM00356,superfamily_CCCH zinc finger
PUF60	22827	genome.wustl.edu	37	8	144898751	144898751	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_078480.1	-1	reviewed	p.R540H	1.000	172	0%	231	30.7%	351	43.3%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMSmart_SM00360,HMMSmart_SM00361,superfamily_RNA-binding domain RBD
PUF60	22827	genome.wustl.edu	37	8	144899945	144899945	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_078480.1	-1	reviewed	p.E275D	0.998	35	0%	46	37%	191	45.5%	benign(0)	tolerated(0.44)	neutral(0.013)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
EPPK1	83481	genome.wustl.edu	37	8	144944812	144944812	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031308.1	-1	validated	p.A870	0.000	19	0%	13	61.5%	0	-	-	-	-	HMMSmart_SM00250
PLEC	5339	genome.wustl.edu	37	8	144998384	144998384	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201380.2	-1	reviewed	p.E2042K	1.000	16	0%	20	30%	20	30%	unknown(0)	-	-	NULL
PLEC	5339	genome.wustl.edu	37	8	145024540	145024540	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201380.2	-1	reviewed	p.R112H	0.993	24	0%	44	29.5%	1	100%	unknown(0)	-	-	NULL
PARP10	84875	genome.wustl.edu	37	8	145059118	145059118	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032789.3	-1	validated	p.S351L	0.001	61	0%	80	35%	3	0%	benign(0.04)	deleterious(0)	neutral(0.447)	NULL
OPLAH	26873	genome.wustl.edu	37	8	145112502	145112502	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000426825	-1	known	p.R424H	0.085	28	0%	45	42.2%	3	0%	probably_damaging(0.973)	tolerated(0.15)	deleterious(0.656)	HMMPfam_Hydantoinase_A
SLC52A2	79581	genome.wustl.edu	37	8	145583921	145583921	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024531.3	+1	validated	p.A257T	0.022	14	0%	41	46.3%	148	45.9%	benign(0.129)	tolerated(0.6)	neutral(0.015)	NULL
TONSL	4796	genome.wustl.edu	37	8	145661050	145661050	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013432.4	-1	reviewed	p.G922	0.024	23	0%	18	50%	17	70.5%	-	-	-	NULL
TONSL	4796	genome.wustl.edu	37	8	145669329	145669329	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013432.4	-1	reviewed	p.A67D	1.000	8	0.000	9	0.444	5	60%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00028,superfamily_TPR-like
ARHGAP39	80728	genome.wustl.edu	37	8	145763177	145763177	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025251.1	-1	validated	p.L848I	1.000	284	0%	433	34.4%	8	12.5%	possibly_damaging(0.701)	tolerated(0.4)	neutral(0.268)	HMMPfam_MyTH4
ZNF34	80778	genome.wustl.edu	37	8	145999190	145999190	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030580.3	-1	validated	p.R382C	0.350	111	0%	162	34.6%	9	22.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF7	7553	genome.wustl.edu	37	8	146054881	146054881	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003416.2	+1	validated	p.D8N	0.999	128	0%	255	29%	2	50%	possibly_damaging(0.921)	deleterious(0)	deleterious(0.816)	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
ZNF7	7553	genome.wustl.edu	37	8	146067301	146067301	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003416.2	+1	validated	p.R270I	0.181	74	0%	125	32.8%	6	16.6%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF7	7553	genome.wustl.edu	37	8	146067385	146067385	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003416.2	+1	validated	p.R298I	0.983	104	0%	166	28.9%	13	38.4%	probably_damaging(0.983)	tolerated(0.11)	deleterious(0.701)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
C8orf33	65265	genome.wustl.edu	37	8	146278181	146278181	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023080.2	+1	validated	p.K72N	0.994	29	0%	55	27.3%	20	40%	probably_damaging(0.98)	tolerated(0.37)	neutral(0.443)	NULL
FOXD4	2298	genome.wustl.edu	37	9	118039	118039	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207305.3	-1	validated	p.I27	0.999	118	0%	128	28.1%	1	100%	-	-	-	NULL
CBWD1	55871	genome.wustl.edu	37	9	172148	172148	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018491.3	-1	validated	p.E121D	1.000	854	0%	1250	30.6%	16	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_cobW,superfamily_P-loop containing nucleoside triphosphate hydrolases
DOCK8	81704	genome.wustl.edu	37	9	339015	339015	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203447.3	+1	reviewed	p.R410C	0.999	167	0%	210	35.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DOCK8	81704	genome.wustl.edu	37	9	407048	407048	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203447.3	+1	reviewed	p.A1102V	1.000	81	0%	74	35.1%	0	-	benign(0.008)	tolerated(1)	-	NULL
DOCK8	81704	genome.wustl.edu	37	9	452072	452072	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203447.3	+1	reviewed	p.R1940Q	1.000	106	0%	151	25.2%	4	0%	probably_damaging(0.998)	tolerated(0.19)	deleterious(0.524)	HMMPfam_Ded_cyto
DOCK8	81704	genome.wustl.edu	37	9	463658	463658	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203447.3	+1	reviewed	p.K2002N	1.000	126	0%	224	30.8%	2	0%	benign(0.378)	tolerated(0.11)	neutral(0.392)	NULL
DMRT1	1761	genome.wustl.edu	37	9	916815	916815	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021951.2	+1	reviewed	p.S292Y	0.999	195	0%	241	37.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
DMRT3	58524	genome.wustl.edu	37	9	990704	990704	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021240.2	+1	validated	p.R373M	1.000	63	0%	66	40.9%	2	100%	probably_damaging(0.96)	deleterious(0)	deleterious(0.848)	NULL
SMARCA2	6595	genome.wustl.edu	37	9	2032966	2032966	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003070.3	+1	reviewed	p.I80M	1.000	111	0%	123	34.1%	9	33.3%	benign(0)	tolerated(1)	-	NULL
SMARCA2	6595	genome.wustl.edu	37	9	2104109	2104109	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003070.3	+1	reviewed	p.L1078F	1.000	271	0%	392	36%	20	30%	possibly_damaging(0.45)	deleterious(0.02)	deleterious(0.530)	superfamily_P-loop containing nucleoside triphosphate hydrolases
SMARCA2	6595	genome.wustl.edu	37	9	2192726	2192726	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003070.3	+1	reviewed	p.T1587M	1.000	216	0%	402	32.6%	51	37.2%	unknown(0)	deleterious(0.03)	-	NULL
VLDLR	7436	genome.wustl.edu	37	9	2651926	2651926	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003383.3	+1	reviewed	p.T796	0.990	196	0%	184	28.8%	49	28.5%	-	-	-	NULL
KIAA0020	9933	genome.wustl.edu	37	9	2807836	2807836	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014878.4	-1	validated	p.R598*	1.000	153	0%	224	37.9%	75	52%	-	-	-	NULL
RFX3	5991	genome.wustl.edu	37	9	3266284	3266284	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_134428.1	-1	reviewed	p.R460Q	1.000	249	0%	160	33.1%	6	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C9orf68	55064	genome.wustl.edu	37	9	4617927	4617927	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039395.3	-1	validated	p.E331*	0.987	111	0%	156	29.5%	0	-	-	-	-	NULL
CDC37L1	55664	genome.wustl.edu	37	9	4688540	4688540	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017913.2	+1	validated	p.D148Y	1.000	63	0%	93	26.9%	6	16.6%	benign(0.301)	tolerated(0.1)	neutral(0.379)	HMMPfam_CDC37_M
CDC37L1	55664	genome.wustl.edu	37	9	4701895	4701895	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017913.2	+1	validated	p.K260R	1.000	146	0%	169	36.7%	8	25%	probably_damaging(0.98)	tolerated(0.19)	deleterious(0.473)	HMMPfam_CDC37_M,superfamily_SSF101391
JAK2	3717	genome.wustl.edu	37	9	5022008	5022008	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004972.3	+1	reviewed	p.T7	0.465	123	0%	177	28.2%	0	-	-	-	-	NULL
JAK2	3717	genome.wustl.edu	37	9	5054832	5054832	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004972.3	+1	reviewed	p.G295E	1.000	128	0%	136	35.3%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
JAK2	3717	genome.wustl.edu	37	9	5066739	5066739	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004972.3	+1	reviewed	p.R426*	1.000	213	0%	274	33.9%	3	33.3%	-	-	-	HMMPfam_SH2,HMMSmart_SH2,superfamily_SSF55550
JAK2	3717	genome.wustl.edu	37	9	5081742	5081742	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004972.3	+1	reviewed	p.E818*	1.000	268	0.4%	304	28%	2	0%	-	-	-	superfamily_Kinase_like
INSL6	11172	genome.wustl.edu	37	9	5163961	5163961	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007179.2	-1	reviewed	p.F198L	0.004	149	0%	224	36.2%	0	-	possibly_damaging(0.478)	tolerated(0.06)	deleterious(0.481)	superfamily_Insulin-like
CD274	29126	genome.wustl.edu	37	9	5456131	5456131	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014143.3	+1	validated	p.V6	0.001	349	0.3%	331	26%	0	-	-	-	-	NULL
KIAA1432	57589	genome.wustl.edu	37	9	5763751	5763751	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020829.2	+1	validated	p.T829	0.681	121	0%	155	34.2%	9	44.4%	-	-	-	HMMPfam_RIC1
KIAA1432	57589	genome.wustl.edu	37	9	5772740	5772740	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020829.2	+1	validated	p.R1186W	0.982	120	0%	126	35.7%	8	12.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIAA2026	158358	genome.wustl.edu	37	9	5922556	5922556	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017969.2	-1	validated	p.S1147Y	0.899	307	0%	401	29.2%	7	42.8%	possibly_damaging(0.496)	deleterious(0.01)	deleterious(0.571)	NULL
KIAA2026	158358	genome.wustl.edu	37	9	5954090	5954090	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017969.2	-1	validated	p.K740*	1.000	348	0%	447	33.8%	3	33.3%	-	-	-	NULL
KIAA2026	158358	genome.wustl.edu	37	9	5968511	5968511	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017969.2	-1	validated	p.R574C	0.409	141	0%	147	34.7%	5	40%	benign(0.006)	deleterious(0.03)	neutral(0.364)	NULL
RANBP6	26953	genome.wustl.edu	37	9	6013426	6013426	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012416.2	-1	validated	p.R728*	1.000	93	0%	166	34.3%	9	44.4%	-	-	-	superfamily_ARM-type_fold
RANBP6	26953	genome.wustl.edu	37	9	6014635	6014635	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012416.2	-1	validated	p.D325N	1.000	106	0%	168	30.4%	2	50%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	superfamily_ARM-type_fold
LOC645969	645969	genome.wustl.edu	37	9	6279151	6279151	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342907.1	+1	model	p.R136Q	0.699	187	0%	277	35%	1	0%	-	-	-	NULL
TPD52L3	89882	genome.wustl.edu	37	9	6328635	6328635	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033516.5	+1	reviewed	p.E14*	0.039	64	0%	97	34%	0	-	-	-	-	HMMPfam_TPD52
GLDC	2731	genome.wustl.edu	37	9	6644632	6644632	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000170.2	-1	reviewed	p.K106Q	1.000	136	0%	261	43.3%	0	-	possibly_damaging(0.444)	tolerated(0.48)	neutral(0.155)	superfamily_PyrdxlP-dep_Trfase_major,HMMPfam_GDC-P
KDM4C	23081	genome.wustl.edu	37	9	6893113	6893113	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015061.3	+1	reviewed	p.E268K	1.000	190	0%	198	36.4%	2	0%	possibly_damaging(0.889)	tolerated(0.05)	deleterious(0.695)	HMMSmart_SM00558,HMMPfam_JmjC
KDM4C	23081	genome.wustl.edu	37	9	6986483	6986483	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015061.3	+1	reviewed	p.E498D	0.004	205	0%	255	38.8%	6	16.6%	benign(0.055)	tolerated(0.31)	neutral(0.030)	NULL
PTPRD	5789	genome.wustl.edu	37	9	8518099	8518099	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002839.3	-1	reviewed	p.S431L	0.983	405	0%	347	38.6%	0	-	benign(0.121)	tolerated(0.22)	neutral(0.052)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
PTPRD	5789	genome.wustl.edu	37	9	8521544	8521544	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002839.3	-1	reviewed	p.R232C	1.000	83	0%	72	36.1%	1	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
TYRP1	7306	genome.wustl.edu	37	9	12708134	12708134	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000550.2	+1	reviewed	p.Q467K	0.998	174	0%	88	28.4%	0	-	benign(0.334)	tolerated(0.07)	neutral(0.424)	NULL
TYRP1	7306	genome.wustl.edu	37	9	12709023	12709023	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000550.2	+1	reviewed	p.G485	0.957	506	0%	185	10.8%	0	-	-	-	-	NULL
MPDZ	8777	genome.wustl.edu	37	9	13162795	13162795	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003829.3	-1	validated	e22-1	1.000	261	0.4%	241	35.7%	0	-	-	-	-	-
MPDZ	8777	genome.wustl.edu	37	9	13196200	13196200	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003829.3	-1	validated	p.E526*	0.155	522	0%	442	32.4%	0	-	-	-	-	NULL
MPDZ	8777	genome.wustl.edu	37	9	13216801	13216801	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003829.3	-1	validated	p.R421I	1.000	423	0%	181	31.5%	1	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_PDZ,HMMSmart_SM00228,superfamily_PDZ domain-like
LOC138864	138864	genome.wustl.edu	37	9	14069210	14069210	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342892.1	+1	model	p.E94*	0.995	73	0%	59	35.6%	0	-	-	-	-	HMMPfam_Mt_ATP-synt_D
NFIB	4781	genome.wustl.edu	37	9	14307111	14307111	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005596.2	-1	validated	p.D147N	1.000	220	0%	221	35.7%	10	40%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_MH1,HMMSmart_SM00523
NFIB	4781	genome.wustl.edu	37	9	14307200	14307200	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005596.2	-1	validated	p.R117I	1.000	216	0%	234	32.5%	12	41.6%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_MH1,HMMSmart_SM00523
FREM1	158326	genome.wustl.edu	37	9	14816805	14816805	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144966.5	-1	reviewed	p.N871H	1.000	77	0%	94	35.1%	2	0%	benign(0.172)	tolerated(0.97)	neutral(0.015)	NULL
FREM1	158326	genome.wustl.edu	37	9	14863874	14863874	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144966.5	-1	reviewed	p.E88K	1.000	148	0%	198	31.8%	1	0%	probably_damaging(0.98)	deleterious(0.02)	deleterious(0.807)	NULL
TTC39B	158219	genome.wustl.edu	37	9	15188068	15188068	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152574.2	-1	validated	p.L366	0.997	314	0%	391	30.7%	2	100%	-	-	-	HMMPfam_Deme6,superfamily_TPR-like
TTC39B	158219	genome.wustl.edu	37	9	15307232	15307232	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000512701	-1	known	p.G30	0.071	15	0%	22	22.7%	0	-	-	-	-	NULL
C9orf93	203238	genome.wustl.edu	37	9	15777723	15777723	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173550.2	+1	predicted	p.Y933H	0.960	91	0%	139	33.8%	0	-	possibly_damaging(0.605)	deleterious(0.04)	deleterious(0.558)	NULL
BNC2	54796	genome.wustl.edu	37	9	16436006	16436006	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017637.5	-1	validated	p.S729L	1.000	157	0%	159	33.3%	0	-	possibly_damaging(0.832)	deleterious(0.02)	deleterious(0.700)	NULL
CNTLN	54875	genome.wustl.edu	37	9	17394760	17394760	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017738.2	+1	validated	p.E770*	0.998	143	0%	137	38.7%	0	-	-	-	-	NULL
SH3GL2	6456	genome.wustl.edu	37	9	17786519	17786519	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003026.2	+1	validated	p.F110V	1.000	102	0%	94	27.7%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_BAR,HMMSmart_SM00721
ADAMTSL1	92949	genome.wustl.edu	37	9	18574118	18574118	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040272.4	+1	validated	p.P110T	1.000	141	0%	140	30.7%	2	0%	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	NULL
LOC100292591	100292591	genome.wustl.edu	37	9	19032898	19032898	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002346181.1	+1	model	p.S124L	0.995	55	0%	55	41.8%	0	-	-	-	-	NULL
DENND4C	55667	genome.wustl.edu	37	9	19342736	19342736	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017925.4	+1	provisional	p.P752L	1.000	134	0%	206	34%	3	33.3%	probably_damaging(0.996)	deleterious(0.03)	deleterious(0.826)	NULL
DENND4C	55667	genome.wustl.edu	37	9	19346459	19346459	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017925.4	+1	provisional	p.R946I	0.996	66	0%	91	19.8%	2	50%	probably_damaging(0.991)	tolerated(0.51)	neutral(0.453)	NULL
DENND4C	55667	genome.wustl.edu	37	9	19371758	19371758	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017925.4	+1	provisional	p.L1609V	1.000	189	0%	230	23.9%	4	0%	benign(0.035)	tolerated(0.37)	neutral(0.021)	NULL
SLC24A2	25769	genome.wustl.edu	37	9	19786709	19786709	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020344.1	-1	provisional	p.V52	0.991	159	0%	201	32.8%	0	-	-	-	-	NULL
KIAA1797	54914	genome.wustl.edu	37	9	20990263	20990263	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017794.3	+1	validated	p.L1716I	0.642	60	0%	80	35%	24	37.5%	benign(0.212)	tolerated(0.06)	neutral(0.343)	NULL
PTPLAD2	401494	genome.wustl.edu	37	9	21015908	21015908	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010915.3	-1	validated	p.L124F	1.000	315	0%	279	28%	3	0%	probably_damaging(0.954)	deleterious(0.01)	deleterious(0.803)	HMMPfam_PTPLA
IFNW1	3467	genome.wustl.edu	37	9	21141167	21141167	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002177.1	-1	provisional	p.A135T	0.000	151	0%	233	28.8%	0	-	benign(0.001)	tolerated(0.92)	-	HMMPfam_Interferon,HMMSmart_IFabd,superfamily_4_helix_cytokine
IFNW1	3467	genome.wustl.edu	37	9	21141398	21141398	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002177.1	-1	provisional	p.D58Y	0.656	99	0%	132	34.1%	0	-	benign(0.019)	deleterious(0.03)	neutral(0.365)	HMMPfam_Interferon,HMMSmart_IFabd,superfamily_4_helix_cytokine
IFNA21	3452	genome.wustl.edu	37	9	21166075	21166075	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002175.2	-1	validated	p.K179N	0.000	268	0%	300	39.3%	0	-	benign(0)	tolerated(0.05)	neutral(0.345)	HMMPfam_Interferon,superfamily_4_helix_cytokine
IFNA14	3448	genome.wustl.edu	37	9	21239653	21239653	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002172.2	-1	validated	p.K94N	0.000	210	0%	190	34.2%	0	-	benign(0.364)	tolerated(0.07)	neutral(0.435)	HMMPfam_Interferon,HMMSmart_IFabd,superfamily_4_helix_cytokine
KLHL9	55958	genome.wustl.edu	37	9	21334100	21334100	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018847.2	-1	validated	p.Y253	0.901	224	0%	348	30.7%	4	25%	-	-	-	HMMPfam_BACK
KLHL9	55958	genome.wustl.edu	37	9	21334621	21334621	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018847.2	-1	validated	p.M80V	1.000	107	0%	145	29.7%	2	50%	probably_damaging(0.961)	deleterious(0.01)	deleterious(0.810)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
IFNA2	3440	genome.wustl.edu	37	9	21384921	21384921	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000605.3	-1	validated	p.E136D	0.001	349	0%	331	32%	0	-	benign(0.01)	tolerated(0.09)	neutral(0.297)	HMMPfam_Interferon,HMMSmart_IFabd,superfamily_4_helix_cytokine
IFNA2	3440	genome.wustl.edu	37	9	21385296	21385296	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000605.3	-1	validated	p.L11	0.007	154	0%	149	34.2%	0	-	-	-	-	HMMPfam_Interferon
LOC402360	402360	genome.wustl.edu	37	9	23682125	23682125	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342894.1	+1	model	p.K77N	1.000	29	0%	19	36.8%	0	-	-	-	-	NULL
ELAVL2	1993	genome.wustl.edu	37	9	23762099	23762099	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004432.3	-1	reviewed	p.Y45C	1.000	374	0%	282	29.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
IFT74	80173	genome.wustl.edu	37	9	26980596	26980596	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099222.1	+1	validated	p.S95Y	1.000	360	0%	474	29.1%	5	80%	probably_damaging(0.995)	deleterious(0.03)	deleterious(0.822)	NULL
LRRC19	64922	genome.wustl.edu	37	9	26996331	26996331	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022901.2	-1	validated	p.S254	0.015	175	0%	226	27.9%	0	-	-	-	-	NULL
LRRC19	64922	genome.wustl.edu	37	9	26999611	26999611	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022901.2	-1	validated	e1+1	1.000	104	0%	151	31.1%	0	-	-	-	-	-
TEK	7010	genome.wustl.edu	37	9	27157910	27157910	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000459.3	+1	reviewed	p.I45T	1.000	167	0%	226	37.6%	3	0%	possibly_damaging(0.647)	deleterious(0)	deleterious(0.671)	HMMPfam_Ig_Tie2_1
TEK	7010	genome.wustl.edu	37	9	27158095	27158095	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000459.3	+1	reviewed	p.R107*	1.000	147	0%	290	34.5%	2	0%	-	-	-	HMMPfam_Ig_Tie2_1
TEK	7010	genome.wustl.edu	37	9	27192600	27192600	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000459.3	+1	reviewed	p.R535C	0.411	99	0%	80	37.5%	4	0%	possibly_damaging(0.909)	tolerated(0.05)	deleterious(0.708)	superfamily_FN_III-like
MOB3B	79817	genome.wustl.edu	37	9	27359143	27359143	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024761.3	-1	reviewed	p.F170	1.000	172	0%	227	38.3%	1	0%	-	-	-	HMMPfam_Mob1_phocein,superfamily_Mob1_phocein
IFNK	56832	genome.wustl.edu	37	9	27524880	27524880	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020124.2	+1	reviewed	p.A182	0.997	92	0%	109	38.5%	0	-	-	-	-	HMMPfam_Interferon,HMMSmart_SM00076,PatternScan_INTERFERON_A_B_D,superfamily_4-helical cytokines
C9orf72	203228	genome.wustl.edu	37	9	27567040	27567040	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018325.2	-1	validated	p.A27T	1.000	105	0%	136	27.2%	1	0%	possibly_damaging(0.913)	deleterious(0.01)	deleterious(0.770)	NULL
LINGO2	158038	genome.wustl.edu	37	9	27949465	27949465	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152570.1	-1	provisional	p.S402Y	1.000	163	0%	170	34.7%	0	-	possibly_damaging(0.903)	tolerated(0.12)	deleterious(0.619)	HMMSmart_LRRCT
LINGO2	158038	genome.wustl.edu	37	9	27950428	27950428	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152570.1	-1	provisional	p.P81H	1.000	293	0%	327	29.1%	0	-	possibly_damaging(0.44)	tolerated(0.12)	neutral(0.404)	superfamily_SSF52058
LINGO2	158038	genome.wustl.edu	37	9	27950531	27950531	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152570.1	-1	provisional	p.R47*	1.000	130	0%	148	33.8%	0	-	-	-	-	HMMPfam_LRRNT,HMMSmart_LRRNT,superfamily_SSF52058
LOC100288436	100288436	genome.wustl.edu	37	9	30559057	30559057	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342887.1	-1	model	p.K127N	0.012	284	0%	429	34%	10	0%	-	-	-	NULL
LOC100288436	100288436	genome.wustl.edu	37	9	30559294	30559294	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342887.1	-1	model	p.E48D	0.054	105	0%	129	34.9%	4	0%	-	-	-	NULL
DDX58	23586	genome.wustl.edu	37	9	32493845	32493845	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014314.3	-1	reviewed	p.E113*	1.000	121	0%	99	24.2%	2	50%	-	-	-	NULL
TOPORS	10210	genome.wustl.edu	37	9	32541770	32541770	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005802.3	-1	reviewed	p.S918Y	0.967	170	0%	244	33.6%	26	46.1%	possibly_damaging(0.689)	deleterious(0)	deleterious(0.691)	NULL
TOPORS	10210	genome.wustl.edu	37	9	32542508	32542508	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005802.3	-1	reviewed	p.S672Y	0.978	265	0%	401	35.2%	4	25%	unknown(0)	deleterious(0.01)	-	NULL
TOPORS	10210	genome.wustl.edu	37	9	32543046	32543046	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005802.3	-1	reviewed	p.E493*	1.000	73	0%	123	37.4%	6	33.3%	-	-	-	NULL
TAF1L	138474	genome.wustl.edu	37	9	32632360	32632360	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153809.2	-1	provisional	p.S1073Y	1.000	370	0%	676	26%	1	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
TAF1L	138474	genome.wustl.edu	37	9	32633424	32633424	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153809.2	-1	provisional	p.K718N	1.000	313	0%	519	33.3%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
TAF1L	138474	genome.wustl.edu	37	9	32635133	32635133	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153809.2	-1	provisional	p.D149Y	1.000	544	0%	858	35.8%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
TMEM215	401498	genome.wustl.edu	37	9	32784343	32784343	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_212558.2	+1	validated	p.I54	0.228	80	0%	104	20.2%	4	0%	-	-	-	NULL
B4GALT1	2683	genome.wustl.edu	37	9	33113820	33113820	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001497.3	-1	reviewed	p.R339H	1.000	122	0%	183	33.9%	61	37.7%	possibly_damaging(0.435)	deleterious(0.02)	deleterious(0.525)	HMMPfam_Galactosyl_T_2,superfamily_Nucleotide-diphospho-sugar transferases
AQP7	364	genome.wustl.edu	37	9	33385233	33385233	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001170.1	-1	reviewed	p.L267I	0.001	31	0%	42	38.1%	0	-	benign(0.046)	tolerated(0.32)	neutral(0.026)	HMMPfam_MIP,superfamily_MIP
NOL6	65083	genome.wustl.edu	37	9	33465859	33465859	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022917.4	-1	reviewed	p.R801W	1.000	39	0%	100	32%	29	44.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Nrap
ANKRD18B	441459	genome.wustl.edu	37	9	33529160	33529160	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001718334.2	+1	model	p.A290T	0.993	260	0%	438	32%	0	-	benign(0.145)	deleterious(0.01)	neutral(0.418)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
ANKRD18B	441459	genome.wustl.edu	37	9	33548089	33548089	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001718334.2	+1	model	p.E501K	0.050	91	0%	54	27.8%	0	-	benign(0.04)	tolerated(0.06)	neutral(0.325)	NULL
ANKRD18B	441459	genome.wustl.edu	37	9	33548102	33548102	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001718334.2	+1	model	p.N505T	0.077	109	0%	77	33.8%	0	-	possibly_damaging(0.873)	tolerated(0.05)	deleterious(0.684)	NULL
ANKRD18B	441459	genome.wustl.edu	37	9	33555786	33555786	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001718334.2	+1	model	p.K832N	0.747	151	0%	135	34.1%	0	-	probably_damaging(0.98)	tolerated(0.21)	neutral(0.468)	NULL
ANKRD18B	441459	genome.wustl.edu	37	9	33558182	33558182	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001718334.2	+1	model	p.Q885H	0.326	84	0%	95	24.2%	0	-	probably_damaging(0.983)	tolerated(0.24)	neutral(0.466)	NULL
PRSS3	5646	genome.wustl.edu	37	9	33797863	33797863	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007343.2	+1	reviewed	p.K136N	0.036	238	0%	380	32.9%	0	-	benign(0)	tolerated(0.55)	neutral(0.007)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
DNAI1	27019	genome.wustl.edu	37	9	34501143	34501143	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012144.2	+1	reviewed	p.K343Q	1.000	320	0%	411	33.6%	0	-	possibly_damaging(0.929)	tolerated(0.5)	neutral(0.386)	superfamily_WD40_like
DNAI1	27019	genome.wustl.edu	37	9	34517452	34517452	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012144.2	+1	reviewed	p.R663H	1.000	143	0%	225	25.8%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ARID3C	138715	genome.wustl.edu	37	9	34622459	34622459	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017363.1	-1	reviewed	p.E311D	0.999	75	0%	114	29.8%	0	-	benign(0.382)	tolerated(0.15)	neutral(0.363)	NULL
FAM205A	259308	genome.wustl.edu	37	9	34729359	34729359	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001141917.1	-1	validated	p.F22L	0.094	148	0%	172	36%	0	-	benign(0.075)	tolerated(0.07)	neutral(0.324)	NULL
FAM205B	389715	genome.wustl.edu	37	9	34837694	34837694	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000399773	-1	known	p.R49	0.671	252	0%	430	34%	0	-	-	-	-	NULL
KIAA1045	23349	genome.wustl.edu	37	9	34976631	34976631	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015297.1	+1	validated	p.A248V	0.997	71	0%	58	34.5%	0	-	possibly_damaging(0.903)	tolerated(0.48)	neutral(0.368)	NULL
FANCG	2189	genome.wustl.edu	37	9	35077293	35077293	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004629.1	-1	reviewed	p.D205G	0.994	104	0%	171	30.4%	22	45.4%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
PIGO	84720	genome.wustl.edu	37	9	35095327	35095327	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032634.2	-1	reviewed	p.R79Q	1.000	85	0%	121	27.3%	24	54.1%	probably_damaging(0.956)	deleterious(0.03)	deleterious(0.764)	HMMPfam_Phosphodiest,superfamily_Alkaline phosphatase-like
FAM214B	80256	genome.wustl.edu	37	9	35106620	35106620	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025182.2	-1	predicted	p.R325Q	1.000	53	0%	89	31.5%	51	47%	possibly_damaging(0.951)	deleterious(0.01)	deleterious(0.800)	NULL
LOC730110	730110	genome.wustl.edu	37	9	35147801	35147801	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342891.1	-1	model	p.F436C	0.994	54	0%	56	37.5%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
LOC730110	730110	genome.wustl.edu	37	9	35148515	35148515	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342891.1	-1	model	p.H223N	1.000	149	0%	163	31.3%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
LOC730110	730110	genome.wustl.edu	37	9	35148697	35148697	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342891.1	-1	model	p.R162I	0.051	83	0%	72	31.9%	0	-	-	-	-	superfamily_C2H2 and C2HC zinc fingers
TESK1	7016	genome.wustl.edu	37	9	35608405	35608405	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006285.2	+1	reviewed	p.T300I	0.986	96	0%	178	31.5%	111	48.6%	benign(0.025)	tolerated(0.18)	neutral(0.057)	superfamily_Kinase_like
SIT1	27240	genome.wustl.edu	37	9	35650778	35650778	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014450.2	-1	validated	p.D25N	0.002	61	0%	88	28.4%	1	0%	benign(0)	tolerated(1)	-	NULL
C9orf100	84904	genome.wustl.edu	37	9	35664110	35664110	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032818.2	-1	provisional	p.K123T	0.974	110	0%	168	36.9%	5	40%	probably_damaging(0.996)	tolerated(0.16)	deleterious(0.521)	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
TLN1	7094	genome.wustl.edu	37	9	35698618	35698618	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006289.3	-1	reviewed	p.S2395Y	1.000	69	0%	124	27.4%	249	24.8%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_I_LWEQ,HMMSmart_ILWEQ,superfamily_SSF109885
CREB3	10488	genome.wustl.edu	37	9	35736045	35736045	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006368.4	+1	reviewed	p.L204	1.000	116	0%	206	34.5%	130	36.9%	-	-	-	HMMSmart_BRLZ,HMMPfam_bZIP_1
GBA2	57704	genome.wustl.edu	37	9	35738221	35738221	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000378088	-1	known	p.S10L	0.000	199	0%	236	39.8%	9	66.6%	benign(0.002)	tolerated(0.75)	neutral(0.002)	NULL
GBA2	57704	genome.wustl.edu	37	9	35740950	35740950	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020944.2	-1	reviewed	p.D300N	0.998	115	0%	137	41.6%	30	33.3%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
NPR2	4882	genome.wustl.edu	37	9	35802215	35802215	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003995.3	+1	reviewed	p.A549T	1.000	293	0%	542	31.5%	8	50%	benign(0.333)	deleterious(0)	deleterious(0.549)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SPAG8	26206	genome.wustl.edu	37	9	35810025	35810025	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039592.1	-1	reviewed	p.E456D	0.002	223	0%	362	27.6%	0	-	possibly_damaging(0.666)	deleterious(0.04)	deleterious(0.585)	NULL
C9orf128	392307	genome.wustl.edu	37	9	35818938	35818938	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000423537	-1	known	p.E374K	0.992	82	0%	112	33%	0	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
C9orf128	392307	genome.wustl.edu	37	9	35821617	35821617	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012446.2	-1	validated	p.R251W	0.026	176	0%	309	32%	0	-	probably_damaging(0.993)	-	-	NULL
TMEM8B	51754	genome.wustl.edu	37	9	35846936	35846936	+	Missense_Mutation	SNP	C	C	T	rs181619999	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042589.1	+1	provisional	p.R255W	1.000	129	0%	279	32.3%	26	38.4%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
RECK	8434	genome.wustl.edu	37	9	36120698	36120698	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021111.2	+1	reviewed	p.L835V	1.000	269	0.4%	495	31.5%	0	-	probably_damaging(0.999)	tolerated(0.43)	deleterious(0.504)	NULL
GNE	10020	genome.wustl.edu	37	9	36227267	36227267	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128227.1	-1	reviewed	p.R451Q	1.000	96	0%	175	43.4%	2	0%	possibly_damaging(0.71)	deleterious(0)	deleterious(0.701)	HMMPfam_ROK,superfamily_SSF53067
GNE	10020	genome.wustl.edu	37	9	36233980	36233980	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128227.1	-1	reviewed	p.E338*	1.000	140	0%	277	33.2%	1	0%	-	-	-	HMMPfam_Epimerase_2,superfamily_SSF53756
RNF38	152006	genome.wustl.edu	37	9	36375992	36375992	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022781.4	-1	reviewed	p.R99*	1.000	236	0%	548	34.7%	4	25%	-	-	-	NULL
MELK	9833	genome.wustl.edu	37	9	36671156	36671156	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014791.2	+1	provisional	p.R556I	0.966	83	0%	150	34%	29	37.9%	benign(0.001)	deleterious(0.05)	neutral(0.345)	superfamily_SSF103243
PAX5	5079	genome.wustl.edu	37	9	37015134	37015134	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016734.1	-1	reviewed	p.V90	0.981	185	0%	245	28.2%	0	-	-	-	-	HMMPfam_PAX,HMMSmart_SM00351,superfamily_Homeodomain-like
ZCCHC7	84186	genome.wustl.edu	37	9	37305580	37305580	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032226.2	+1	validated	p.L274I	0.997	231	0%	356	32%	16	43.7%	probably_damaging(0.998)	tolerated(0.15)	deleterious(0.716)	HMMSmart_SM00343,superfamily_Retrovirus zinc finger-like domains
ZBTB5	9925	genome.wustl.edu	37	9	37441148	37441148	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014872.2	-1	validated	p.E467D	1.000	60	1.7%	103	36.9%	12	50%	benign(0.003)	tolerated(0.53)	neutral(0.007)	NULL
ZBTB5	9925	genome.wustl.edu	37	9	37441761	37441761	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014872.2	-1	validated	p.S263Y	0.881	31	0%	41	34.1%	12	50%	benign(0.076)	deleterious(0)	neutral(0.450)	NULL
FRMPD1	22844	genome.wustl.edu	37	9	37692685	37692685	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014907.2	+1	validated	p.R16I	1.000	93	0%	103	31.1%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FRMPD1	22844	genome.wustl.edu	37	9	37745345	37745345	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014907.2	+1	validated	p.G1106R	0.001	84	0%	165	36.4%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
RG9MTD3	158234	genome.wustl.edu	37	9	37763673	37763673	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144964.2	+1	validated	p.D115Y	1.000	165	0.6%	318	31.1%	4	100%	benign(0.044)	deleterious(0.04)	neutral(0.351)	NULL
DCAF10	79269	genome.wustl.edu	37	9	37842225	37842225	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024345.3	+1	validated	p.T265A	1.000	219	0%	364	31.9%	5	100%	possibly_damaging(0.942)	tolerated(0.39)	neutral(0.403)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
MCART1	92014	genome.wustl.edu	37	9	37878550	37878550	+	RNA	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_024872.1	-1	validated	NULL	1.000	16	0%	16	43.8%	0	-	-	-	-	-
ANKRD18A	253650	genome.wustl.edu	37	9	38595677	38595677	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000399703	-1	known	p.L554I	0.967	221	0%	162	37.7%	0	-	possibly_damaging(0.649)	tolerated(0.18)	neutral(0.284)	NULL
ANKRD18A	253650	genome.wustl.edu	37	9	38596010	38596010	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000399703	-1	known	p.E443K	0.799	356	0%	270	24.8%	0	-	benign(0.001)	tolerated(0.12)	neutral(0.261)	NULL
CNTNAP3	79937	genome.wustl.edu	37	9	39175984	39175984	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033655.3	-1	reviewed	p.E345K	1.000	193	0%	214	24.8%	1	0%	benign(0.001)	tolerated(0.12)	neutral(0.261)	NULL
ZNF658	26149	genome.wustl.edu	37	9	40772250	40772250	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033160.5	-1	validated	p.L1009F	0.091	203	0%	232	58.6%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF658	26149	genome.wustl.edu	37	9	40773216	40773216	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033160.5	-1	validated	p.E687*	0.040	235	0%	318	22.3%	0	-	-	-	-	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
LOC389722	389722	genome.wustl.edu	37	9	43876106	43876106	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342910.1	+1	model	p.S733Y	1.000	89	0%	168	23.2%	0	-	possibly_damaging(0.7)	deleterious(0.02)	deleterious(0.635)	superfamily_Concanavalin A-like lectins/glucanases
PGM5	5239	genome.wustl.edu	37	9	71098851	71098851	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021965.3	+1	validated	p.D456Y	1.000	189	0%	234	30.3%	3	0%	probably_damaging(0.973)	deleterious(0)	deleterious(0.859)	superfamily_Phosphoglucomutase C-terminal domain
C9orf71	169693	genome.wustl.edu	37	9	71152405	71152405	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153237.1	-1	provisional	p.D95Y	1.000	123	0%	133	33.1%	0	-	possibly_damaging(0.882)	deleterious(0.02)	deleterious(0.728)	NULL
FAM122A	116224	genome.wustl.edu	37	9	71395637	71395637	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138333.3	+1	validated	p.R186I	1.000	163	0%	208	38%	7	42.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PRKACG	5568	genome.wustl.edu	37	9	71628130	71628130	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002732.3	-1	reviewed	p.K293N	1.000	102	0%	161	29.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
FXN	2395	genome.wustl.edu	37	9	71687531	71687531	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181425.2	+1	reviewed	p.D165G	0.032	95	0%	198	32.8%	21	42.8%	unknown(0)	deleterious(0)	-	NULL
FAM189A2	9413	genome.wustl.edu	37	9	71992657	71992657	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127608.1	+1	validated	p.R164H	1.000	169	0%	197	39.1%	0	-	probably_damaging(0.999)	tolerated(0.29)	deleterious(0.519)	NULL
APBA1	320	genome.wustl.edu	37	9	72071289	72071289	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001163.3	-1	reviewed	p.I554	0.947	102	0%	133	36.1%	0	-	-	-	-	HMMPfam_PID,HMMSmart_PTB,superfamily_SSF50729
APBA1	320	genome.wustl.edu	37	9	72131013	72131013	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001163.3	-1	reviewed	p.D372N	1.000	59	0%	33	45.5%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
APBA1	320	genome.wustl.edu	37	9	72131316	72131316	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001163.3	-1	reviewed	p.D271N	1.000	9	0.000	9	0.444	0	-	possibly_damaging(0.825)	deleterious(0.02)	deleterious(0.696)	NULL
PTAR1	375743	genome.wustl.edu	37	9	72365750	72365750	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099666.1	-1	validated	p.V68A	1.000	271	0%	205	29.8%	4	25%	possibly_damaging(0.685)	tolerated(1)	neutral(0.244)	superfamily_Prenyl_trans
C9orf135	138255	genome.wustl.edu	37	9	72520869	72520869	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010940.1	+1	validated	e6-1	0.954	273	0%	190	32.6%	0	-	-	-	-	-
MAMDC2	256691	genome.wustl.edu	37	9	72840671	72840671	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153267.4	+1	validated	p.I639M	0.997	140	0%	156	42.3%	1	0%	benign(0.332)	deleterious(0.01)	deleterious(0.510)	HMMPfam_MAM,HMMSmart_SM00137
SMC5	23137	genome.wustl.edu	37	9	72962882	72962882	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015110.3	+1	validated	p.I939M	0.993	73	0%	71	38%	5	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SMC_N,superfamily_SSF52540
SMC5	23137	genome.wustl.edu	37	9	72965054	72965054	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015110.3	+1	validated	p.R972*	1.000	91	0%	96	37.5%	4	25%	-	-	-	HMMPfam_SMC_N,superfamily_SSF52540
TRPM3	80036	genome.wustl.edu	37	9	73151925	73151925	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007471.2	-1	reviewed	p.I1356M	1.000	92	1.1%	159	34.6%	0	-	benign(0.063)	tolerated(0.16)	neutral(0.064)	NULL
TRPM3	80036	genome.wustl.edu	37	9	73230915	73230915	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007471.2	-1	reviewed	p.S800Y	1.000	411	0%	604	35.1%	0	-	benign(0.067)	deleterious(0)	neutral(0.449)	NULL
TMEM2	23670	genome.wustl.edu	37	9	74360063	74360063	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013390.2	-1	validated	p.R302I	0.908	170	0%	197	35.5%	2	50%	benign(0.141)	tolerated(0.1)	neutral(0.298)	NULL
TMEM2	23670	genome.wustl.edu	37	9	74360134	74360134	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013390.2	-1	validated	p.K278N	0.298	181	0%	224	35.7%	0	-	benign(0.03)	tolerated(0.19)	neutral(0.051)	NULL
FAM108B1	51104	genome.wustl.edu	37	9	74481882	74481882	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016014.2	-1	validated	p.I230L	1.000	151	0%	227	30.4%	12	41.6%	benign(0.325)	deleterious(0.04)	neutral(0.451)	superfamily_SSF53474
FAM108B1	51104	genome.wustl.edu	37	9	74489764	74489764	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016014.2	-1	validated	p.R78I	1.000	192	0%	325	33.8%	8	75%	possibly_damaging(0.671)	deleterious(0.04)	deleterious(0.587)	superfamily_SSF53474
GDA	9615	genome.wustl.edu	37	9	74817493	74817493	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004293.3	+1	validated	p.F73L	1.000	135	0%	173	62.4%	0	-	probably_damaging(1)	tolerated(0.19)	deleterious(0.549)	HMMPfam_Amidohydro_1
ZFAND5	7763	genome.wustl.edu	37	9	74975575	74975575	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102420.1	-1	validated	p.R40S	0.995	180	0%	220	31.4%	54	11.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ALDH1A1	216	genome.wustl.edu	37	9	75531955	75531955	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000689.3	-1	reviewed	p.A306T	1.000	186	0%	164	30.5%	54	48.1%	possibly_damaging(0.908)	deleterious(0.02)	deleterious(0.744)	HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_CYS,superfamily_ALDH-like
RORB	6096	genome.wustl.edu	37	9	77277507	77277507	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006914.3	+1	reviewed	p.L293I	0.463	158	0%	264	27.3%	0	-	benign(0.002)	tolerated(0.52)	neutral(0.009)	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain
TRPM6	140803	genome.wustl.edu	37	9	77354917	77354917	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017662.4	-1	reviewed	p.E1737*	1.000	81	0%	86	37.2%	0	-	-	-	-	superfamily_Protein kinase-like (PK-like)
TRPM6	140803	genome.wustl.edu	37	9	77357489	77357489	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017662.4	-1	reviewed	p.V1730F	0.985	180	0%	258	27.9%	0	-	benign(0.162)	deleterious(0)	neutral(0.459)	superfamily_Protein kinase-like (PK-like)
TRPM6	140803	genome.wustl.edu	37	9	77397304	77397304	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017662.4	-1	reviewed	p.M1061I	1.000	128	0%	226	35%	0	-	possibly_damaging(0.887)	deleterious(0.01)	deleterious(0.752)	HMMPfam_Ion_trans
TRPM6	140803	genome.wustl.edu	37	9	77470454	77470454	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017662.4	-1	reviewed	p.Q47H	0.999	220	0%	283	32.2%	0	-	unknown(0)	tolerated(0.15)	-	NULL
PCSK5	5125	genome.wustl.edu	37	9	78682955	78682955	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006200.3	+1	reviewed	p.I239	0.980	67	0%	79	36.7%	6	33.3%	-	-	-	HMMPfam_Peptidase_S8,superfamily_Subtilisin-like
RFK	55312	genome.wustl.edu	37	9	79003486	79003486	+	Missense_Mutation	SNP	C	C	A	rs76023381	byFrequency;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000376736	-1	known	p.K107N	1.000	112	0%	209	29.2%	21	42.8%	benign(0.262)	tolerated(0.3)	neutral(0.056)	HMMPfam_Flavokinase,superfamily_Riboflavin_kinase
GCNT1	2650	genome.wustl.edu	37	9	79117308	79117308	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001097633.1	+1	reviewed	p.T4M	0.094	70	0%	132	28%	11	72.7%	benign(0.113)	deleterious(0.03)	neutral(0.373)	NULL
PRUNE2	158471	genome.wustl.edu	37	9	79320039	79320039	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015225.2	-1	validated	p.S2384Y	0.001	107	0%	134	29.9%	0	-	possibly_damaging(0.513)	deleterious(0)	deleterious(0.617)	NULL
PRUNE2	158471	genome.wustl.edu	37	9	79324898	79324898	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015225.2	-1	validated	p.D764E	1.000	126	0%	157	35.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PRUNE2	158471	genome.wustl.edu	37	9	79328557	79328557	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015225.2	-1	validated	p.F279L	1.000	110	0%	157	28.7%	0	-	benign(0)	tolerated(0.59)	neutral(0.004)	superfamily_SSF64182
VPS13A	23230	genome.wustl.edu	37	9	79896801	79896801	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033305.2	+1	reviewed	p.D975N	0.003	162	0%	168	32.1%	0	-	benign(0.001)	tolerated(0.31)	neutral(0.027)	NULL
VPS13A	23230	genome.wustl.edu	37	9	79922876	79922876	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033305.2	+1	reviewed	p.E1326*	1.000	123	0%	190	29.5%	0	-	-	-	-	NULL
VPS13A	23230	genome.wustl.edu	37	9	79959119	79959119	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033305.2	+1	reviewed	p.V2359	0.971	158	0.6%	206	30.1%	1	100%	-	-	-	HMMPfam_DUF1162
PSAT1	29968	genome.wustl.edu	37	9	80943058	80943058	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_058179.2	+1	reviewed	p.L321I	0.999	122	0%	176	31.2%	40	42.5%	benign(0.036)	tolerated(0.12)	neutral(0.263)	HMMPfam_Aminotran_5,superfamily_PLP-dependent transferases
TLE4	7091	genome.wustl.edu	37	9	82323521	82323521	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007005.3	+1	validated	p.R361S	0.998	144	0%	181	24.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TLE4	7091	genome.wustl.edu	37	9	82339958	82339958	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007005.3	+1	validated	p.E741*	1.000	269	0%	274	28.5%	6	33.3%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like
TLE1	7088	genome.wustl.edu	37	9	84205842	84205842	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005077.3	-1	provisional	p.E569D	1.000	75	0%	68	32.4%	43	16.2%	probably_damaging(0.979)	tolerated(0.09)	deleterious(0.718)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
TLE1	7088	genome.wustl.edu	37	9	84230908	84230908	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005077.3	-1	provisional	p.E303*	1.000	96	0%	155	38.7%	16	12.5%	-	-	-	NULL
FAM75D1	389763	genome.wustl.edu	37	9	84607918	84607918	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001670.2	+1	validated	p.R845*	0.000	277	0%	389	31.4%	0	-	-	-	-	NULL
KIF27	55582	genome.wustl.edu	37	9	86495329	86495329	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017576.1	-1	provisional	p.E842D	1.000	429	0.2%	677	30.1%	6	33.3%	probably_damaging(0.998)	tolerated(0.07)	deleterious(0.793)	NULL
KIF27	55582	genome.wustl.edu	37	9	86504013	86504013	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017576.1	-1	provisional	p.E655D	0.999	101	0%	165	24.2%	1	0%	possibly_damaging(0.442)	tolerated(0.06)	neutral(0.467)	NULL
RMI1	80010	genome.wustl.edu	37	9	86617688	86617688	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024945.2	+1	validated	p.F596C	0.998	133	0%	201	36.8%	5	40%	probably_damaging(0.993)	deleterious(0.01)	deleterious(0.856)	NULL
SLC28A3	64078	genome.wustl.edu	37	9	86914553	86914553	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022127.1	-1	provisional	p.F204	0.899	122	0%	218	29.4%	0	-	-	-	-	HMMPfam_Nucleos_tra2_N
NTRK2	4915	genome.wustl.edu	37	9	87325662	87325662	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006180.3	+1	reviewed	p.S180I	0.999	210	0%	281	31.7%	0	-	benign(0.367)	deleterious(0.01)	deleterious(0.522)	HMMSmart_LRRCT,superfamily_SSF52058
NTRK2	4915	genome.wustl.edu	37	9	87636169	87636169	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006180.3	+1	reviewed	p.V778	1.000	70	0%	75	38.7%	0	-	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
AGTPBP1	23287	genome.wustl.edu	37	9	88203388	88203388	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015239.2	-1	validated	p.R870C	1.000	140	0%	118	34.7%	10	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Peptidase_M14,superfamily_SSF53187
NAA35	60560	genome.wustl.edu	37	9	88633239	88633239	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024635.3	+1	validated	p.R615W	1.000	164	0%	227	33.9%	36	47.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZCCHC6	79670	genome.wustl.edu	37	9	88934576	88934576	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024617.3	-1	validated	p.S1013Y	1.000	165	0%	113	30.1%	2	50%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	superfamily_Nucleotidyltransferase
DAPK1	1612	genome.wustl.edu	37	9	90219902	90219902	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004938.2	+1	reviewed	p.E32D	1.000	55	0%	85	34.1%	1	0%	benign(0.006)	tolerated(0.39)	neutral(0.016)	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
DAPK1	1612	genome.wustl.edu	37	9	90266526	90266526	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004938.2	+1	reviewed	p.D571N	0.999	202	0%	282	29.4%	1	100%	benign(0.382)	tolerated(0.71)	neutral(0.123)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
DAPK1	1612	genome.wustl.edu	37	9	90321757	90321757	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004938.2	+1	reviewed	p.F1257L	1.000	25	0%	20	25%	10	20%	probably_damaging(0.971)	tolerated(0.22)	neutral(0.455)	NULL
CTSL1	1514	genome.wustl.edu	37	9	90343513	90343513	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001912.4	+1	reviewed	p.S137Y	1.000	367	0%	647	31.7%	86	2.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_THIOL_PROTEASE_CYS,HMMPfam_Peptidase_C1,HMMSmart_Pept_C1,superfamily_SSF54001
C9orf79	286234	genome.wustl.edu	37	9	90498920	90498920	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178828.4	+1	validated	p.R108I	0.000	125	0%	129	34.1%	0	-	possibly_damaging(0.618)	deleterious(0.03)	deleterious(0.580)	NULL
C9orf79	286234	genome.wustl.edu	37	9	90500180	90500180	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178828.4	+1	validated	p.D260N	0.000	111	0%	160	27.5%	0	-	possibly_damaging(0.916)	tolerated(0.06)	deleterious(0.690)	NULL
C9orf79	286234	genome.wustl.edu	37	9	90501328	90501328	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178828.4	+1	validated	p.G642	0.000	45	0%	66	31.8%	0	-	-	-	-	NULL
C9orf79	286234	genome.wustl.edu	37	9	90502338	90502338	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178828.4	+1	validated	p.S979F	0.000	31	0%	45	17.8%	0	-	probably_damaging(0.957)	deleterious(0.01)	deleterious(0.806)	NULL
FAM75C1	441452	genome.wustl.edu	37	9	90538068	90538068	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145124.1	+1	validated	p.S1082	0.002	221	0%	334	28.7%	0	-	-	-	-	NULL
SPIN1	10927	genome.wustl.edu	37	9	91090172	91090172	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006717.2	+1	validated	p.D257N	1.000	116	0%	145	37.2%	14	42.8%	benign(0.169)	tolerated(0.21)	neutral(0.059)	HMMPfam_Spin-Ssty
S1PR3	1903	genome.wustl.edu	37	9	91616554	91616554	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005226.2	+1	reviewed	p.D147N	0.930	142	0%	201	31.8%	7	0%	benign(0.017)	tolerated(1)	neutral(0.001)	HMMPfam_7tm_1,superfamily_SSF81321
SHC3	53358	genome.wustl.edu	37	9	91653055	91653055	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016848.4	-1	validated	p.E503D	1.000	117	0%	143	32.2%	0	-	possibly_damaging(0.432)	tolerated(0.37)	neutral(0.160)	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain
SHC3	53358	genome.wustl.edu	37	9	91657061	91657061	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016848.4	-1	validated	p.H414Y	0.000	169	0%	176	25%	0	-	benign(0)	tolerated(1)	-	NULL
DIRAS2	54769	genome.wustl.edu	37	9	93375522	93375522	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017594.3	-1	validated	p.C196	0.772	263	0%	365	34%	0	-	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
NFIL3	4783	genome.wustl.edu	37	9	94171922	94171922	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005384.2	-1	validated	p.L365	0.003	91	0%	183	32.2%	17	23.5%	-	-	-	HMMPfam_Vert_IL3-reg_TF
NFIL3	4783	genome.wustl.edu	37	9	94172202	94172202	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005384.2	-1	validated	p.P272L	0.995	108	0%	235	37%	19	10.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Vert_IL3-reg_TF
SPTLC1	10558	genome.wustl.edu	37	9	94809461	94809461	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006415.2	-1	reviewed	p.E358D	1.000	242	0%	324	28.7%	35	31.4%	benign(0)	tolerated(0.21)	neutral(0.044)	HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
NOL8	55035	genome.wustl.edu	37	9	95078394	95078394	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017948.5	-1	validated	p.Y171	1.000	207	0%	383	35.8%	6	16.6%	-	-	-	NULL
OGN	4969	genome.wustl.edu	37	9	95163452	95163452	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014057.3	-1	reviewed	p.I64L	0.010	367	0%	455	32.5%	0	-	benign(0.002)	tolerated(0.12)	neutral(0.261)	superfamily_L domain-like
ECM2	1842	genome.wustl.edu	37	9	95263287	95263287	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001393.2	-1	reviewed	p.P551	0.969	213	0%	405	36%	1	0%	-	-	-	superfamily_SSF52058
ECM2	1842	genome.wustl.edu	37	9	95272235	95272235	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001393.2	-1	reviewed	p.E418*	1.000	174	0%	214	28%	0	-	-	-	-	HMMPfam_LRR_1,superfamily_SSF52058
ENSG00000218940	0	genome.wustl.edu	37	9	95584491	95584491	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000375504	+1	known	e6-1	0.016	76	0%	56	37.5%	0	-	-	-	-	-
ZNF484	83744	genome.wustl.edu	37	9	95608934	95608934	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031486.1	-1	provisional	p.R712I	1.000	91	0%	142	33.8%	1	100%	possibly_damaging(0.828)	tolerated(0.11)	deleterious(0.586)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
FGD3	89846	genome.wustl.edu	37	9	95772641	95772641	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001083536.1	+1	validated	p.D317	0.123	16	0%	39	30.8%	16	18.7%	-	-	-	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
FGD3	89846	genome.wustl.edu	37	9	95778087	95778087	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001083536.1	+1	validated	p.E417D	1.000	101	0%	129	35.7%	21	38%	probably_damaging(0.994)	tolerated(0.12)	deleterious(0.713)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
SUSD3	203328	genome.wustl.edu	37	9	95840164	95840164	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145006.2	+1	provisional	p.A105V	0.998	80	0%	98	37.8%	4	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
PTPDC1	138639	genome.wustl.edu	37	9	96859815	96859815	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152422.3	+1	reviewed	p.R321C	1.000	107	0%	229	33.2%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
HIATL1	84641	genome.wustl.edu	37	9	97221498	97221498	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032558.2	+1	validated	p.S442Y	1.000	278	0%	390	29.7%	20	30%	possibly_damaging(0.893)	deleterious(0)	deleterious(0.796)	superfamily_MFS_gen_substrate_transporter
FBP2	8789	genome.wustl.edu	37	9	97349706	97349706	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003837.2	-1	reviewed	p.K72N	1.000	134	0%	214	35%	0	-	probably_damaging(0.976)	deleterious(0)	deleterious(0.863)	HMMPfam_FBPase,superfamily_SSF56655
C9orf3	84909	genome.wustl.edu	37	9	97823040	97823040	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032823.3	+1	provisional	p.R628Q	0.001	202	0.5%	229	41%	45	6.6%	benign(0.206)	tolerated(0.22)	neutral(0.062)	HMMPfam_Leuk-A4-hydro_C,superfamily_ARM-type_fold
FANCC	2176	genome.wustl.edu	37	9	97897778	97897778	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000136.2	-1	reviewed	p.K231N	1.000	95	0%	104	34.6%	4	50%	possibly_damaging(0.45)	deleterious(0.01)	deleterious(0.553)	HMMPfam_Fanconi_C
PTCH1	5727	genome.wustl.edu	37	9	98218603	98218603	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000264.3	-1	reviewed	p.I1087	0.640	110	0%	118	34.7%	15	13.3%	-	-	-	HMMPfam_Patched,superfamily_SSF82866
PTCH1	5727	genome.wustl.edu	37	9	98239054	98239054	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000264.3	-1	reviewed	p.R530I	1.000	214	0%	342	32.5%	10	40%	possibly_damaging(0.62)	tolerated(0.05)	deleterious(0.561)	HMMPfam_Patched,superfamily_SSF82866
PTCH1	5727	genome.wustl.edu	37	9	98242810	98242810	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000264.3	-1	reviewed	p.K269N	1.000	279	0%	317	33.4%	5	80%	probably_damaging(0.999)	tolerated(0.71)	deleterious(0.492)	HMMPfam_Patched
C9orf102	375748	genome.wustl.edu	37	9	98669477	98669477	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010895.2	+1	validated	p.R249C	1.000	187	0%	206	28.2%	0	-	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
C9orf102	375748	genome.wustl.edu	37	9	98683470	98683470	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010895.2	+1	validated	p.S402Y	1.000	242	0%	234	35%	0	-	benign(0.378)	tolerated(0.07)	neutral(0.440)	HMMPfam_SNF2_N
HABP4	22927	genome.wustl.edu	37	9	99250529	99250529	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014282.2	+1	validated	p.E386D	0.936	274	0%	628	33%	36	41.6%	possibly_damaging(0.794)	tolerated(0.48)	neutral(0.308)	NULL
CDC14B	8555	genome.wustl.edu	37	9	99284842	99284842	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033331.2	-1	reviewed	p.R430I	1.000	185	0%	342	30.4%	12	58.3%	possibly_damaging(0.947)	deleterious(0)	deleterious(0.835)	NULL
ZNF510	22869	genome.wustl.edu	37	9	99522531	99522531	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014930.1	-1	provisional	p.R194I	0.171	85	0%	66	22.7%	1	0%	possibly_damaging(0.928)	tolerated(0.31)	neutral(0.403)	NULL
ZNF782	158431	genome.wustl.edu	37	9	99580535	99580535	+	Nonsense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001662.1	-1	provisional	p.Y590*	0.017	213	0%	292	31.5%	0	-	-	-	-	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF782	158431	genome.wustl.edu	37	9	99580812	99580812	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001662.1	-1	provisional	p.R498I	0.998	200	0%	233	37.3%	3	0%	possibly_damaging(0.859)	deleterious(0)	deleterious(0.776)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF782	158431	genome.wustl.edu	37	9	99580913	99580913	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000289032	-1	known	p.P453S	0.996	220	0%	233	33%	3	33.3%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
FAM22G	441457	genome.wustl.edu	37	9	99697721	99697721	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001045477.2	+1	validated	p.F275L	0.298	100	0%	156	25.6%	0	-	possibly_damaging(0.902)	deleterious(0)	deleterious(0.801)	NULL
FAM22G	441457	genome.wustl.edu	37	9	99700776	99700776	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000372322	+1	known	p.P524H	0.001	115	0%	169	16.6%	0	-	possibly_damaging(0.597)	tolerated(0.36)	neutral(0.226)	NULL
HIATL2	84278	genome.wustl.edu	37	9	99721176	99721176	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000375223	-1	known	p.L70I	0.999	259	0%	397	27.7%	21	42.8%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_MFS_gen_substrate_transporter
C9orf174	100499483	genome.wustl.edu	37	9	100128850	100128850	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020893.1	+1	predicted	p.R1342C	0.981	72	0%	147	24.5%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TDRD7	23424	genome.wustl.edu	37	9	100201579	100201579	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014290.2	+1	validated	p.T206A	0.984	170	0.6%	113	38.1%	0	-	benign(0)	tolerated(0.71)	neutral(0.002)	NULL
TDRD7	23424	genome.wustl.edu	37	9	100234642	100234642	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014290.2	+1	validated	p.I603	1.000	181	0%	181	33.7%	6	33.3%	-	-	-	NULL
NCBP1	4686	genome.wustl.edu	37	9	100426648	100426648	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002486.4	+1	reviewed	p.M608I	1.000	268	0%	395	30.1%	47	53.1%	benign(0.114)	tolerated(0.05)	neutral(0.354)	HMMPfam_MIF4G_like_2,superfamily_ARM-type_fold
NCBP1	4686	genome.wustl.edu	37	9	100426660	100426660	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002486.4	+1	reviewed	p.Q612	1.000	280	0%	399	30.1%	49	36.7%	-	-	-	HMMPfam_MIF4G_like_2,superfamily_ARM-type_fold
XPA	7507	genome.wustl.edu	37	9	100437716	100437716	+	RNA	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_027302.1	-1	reviewed	NULL	0.344	116	0%	106	35.8%	10	40%	-	-	-	-
XPA	7507	genome.wustl.edu	37	9	100451889	100451889	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000380.3	-1	reviewed	p.E106K	1.000	208	0%	279	28%	2	0%	benign(0.155)	tolerated(0.31)	neutral(0.041)	HMMPfam_XPA_N,PatternScan_XPA_1,superfamily_SSF57716
NANS	54187	genome.wustl.edu	37	9	100845299	100845299	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018946.3	+1	reviewed	p.E348*	1.000	84	0%	166	29.5%	126	46.8%	-	-	-	superfamily_AFP III-like domain (Pfam 01354),HMMPfam_SAF
TRIM14	9830	genome.wustl.edu	37	9	100862360	100862360	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014788.2	-1	reviewed	p.K130N	1.000	226	0%	328	36.6%	0	-	possibly_damaging(0.917)	deleterious(0.01)	deleterious(0.774)	NULL
COL15A1	1306	genome.wustl.edu	37	9	101788222	101788222	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001855.3	+1	reviewed	p.G673S	0.973	115	0%	232	31.9%	18	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Collagen
COL15A1	1306	genome.wustl.edu	37	9	101829215	101829215	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001855.3	+1	reviewed	p.F1235V	1.000	173	0%	287	33.1%	56	0%	benign(0.105)	-	-	HMMPfam_Endostatin,superfamily_C-type_lectin_fold
TEX10	54881	genome.wustl.edu	37	9	103092330	103092330	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017746.3	-1	validated	p.E458*	1.000	246	0%	329	29.2%	10	40%	-	-	-	NULL
TEX10	54881	genome.wustl.edu	37	9	103102638	103102638	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017746.3	-1	validated	p.R384Q	1.000	185	0%	227	30%	11	45.4%	probably_damaging(0.999)	tolerated(0.31)	deleterious(0.517)	NULL
TEX10	54881	genome.wustl.edu	37	9	103109630	103109630	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017746.3	-1	validated	p.G80E	1.000	45	0%	54	31.5%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM-type_fold
MSANTD3	91283	genome.wustl.edu	37	9	103213136	103213136	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080655.1	+1	predicted	p.I239T	1.000	90	0%	198	35.4%	30	46.6%	possibly_damaging(0.922)	deleterious(0.01)	deleterious(0.777)	NULL
TMEFF1	8577	genome.wustl.edu	37	9	103278987	103278987	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003692.3	+1	validated	p.R165I	1.000	169	0%	282	35.8%	3	66.6%	possibly_damaging(0.849)	tolerated(0.07)	deleterious(0.645)	NULL
ENSG00000251349	0	genome.wustl.edu	37	9	103312405	103312405	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000502978	+1	known	p.E210*	1.000	199	0.5%	268	34.7%	10	20%	probably_damaging(0.99)	deleterious(0.02)	deleterious(0.825)	NULL
MURC	347273	genome.wustl.edu	37	9	103348116	103348116	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001018116.1	+1	validated	p.D160Y	0.006	82	0%	118	27.1%	1	0%	unknown(0)	deleterious(0.04)	-	NULL
MURC	347273	genome.wustl.edu	37	9	103348192	103348192	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001018116.1	+1	validated	p.A185V	0.765	94	0%	167	40.1%	0	-	possibly_damaging(0.647)	tolerated(0.17)	neutral(0.286)	NULL
ZNF189	7743	genome.wustl.edu	37	9	104171309	104171309	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003452.2	+1	validated	p.R420I	1.000	63	0%	55	34.5%	5	60%	benign(0.198)	tolerated(0.11)	neutral(0.291)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
C9orf125	84302	genome.wustl.edu	37	9	104238267	104238267	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032342.1	-1	provisional	p.L370	0.073	108	0.9%	176	35.8%	12	91.6%	-	-	-	NULL
RNF20	56254	genome.wustl.edu	37	9	104314501	104314501	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019592.5	+1	reviewed	p.R496I	0.992	163	0%	217	30.4%	25	32%	unknown(0)	deleterious(0)	-	NULL
GRIN3A	116443	genome.wustl.edu	37	9	104341579	104341579	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133445.2	-1	reviewed	p.L944M	0.037	343	0.3%	371	34.8%	1	0%	benign(0.019)	deleterious(0.01)	neutral(0.407)	HMMPfam_Lig_chan
CYLC2	1539	genome.wustl.edu	37	9	105767430	105767430	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001340.3	+1	reviewed	p.D173Y	0.017	202	0%	393	30.5%	0	-	unknown(0)	deleterious(0.04)	-	NULL
CYLC2	1539	genome.wustl.edu	37	9	105767844	105767844	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001340.3	+1	reviewed	p.E311*	0.005	172	0%	296	29.1%	0	-	-	-	-	NULL
SMC2	10592	genome.wustl.edu	37	9	106878523	106878523	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042550.1	+1	validated	p.R572*	1.000	133	0%	155	37.4%	2	50%	-	-	-	HMMPfam_SMC_N,HMMPfam_SMC_hinge,superfamily_Smc hinge domain,superfamily_P-loop containing nucleoside triphosphate hydrolases
OR13C4	138804	genome.wustl.edu	37	9	107289160	107289160	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001919.1	-1	provisional	p.E111*	0.840	146	0%	229	32.8%	0	-	-	-	-	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321
OR13C5	138799	genome.wustl.edu	37	9	107361217	107361217	+	Missense_Mutation	SNP	T	T	C	rs61735925	byCluster;byFrequency	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004482.1	-1	provisional	p.T160A	0.000	193	0%	215	26.5%	0	-	benign(0.092)	deleterious(0.03)	neutral(0.371)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ABCA1	19	genome.wustl.edu	37	9	107555122	107555122	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005502.2	-1	reviewed	p.R1901I	1.000	287	0%	331	32%	7	28.5%	possibly_damaging(0.768)	deleterious(0)	deleterious(0.730)	NULL
ABCA1	19	genome.wustl.edu	37	9	107584900	107584900	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005502.2	-1	reviewed	p.Q902R	1.000	132	0%	158	36.1%	1	100%	benign(0.002)	tolerated(0.91)	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
FKTN	2218	genome.wustl.edu	37	9	108397408	108397408	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079802.1	+1	reviewed	p.E417K	0.316	202	0%	318	27%	4	50%	benign(0.002)	tolerated(0.28)	neutral(0.032)	HMMPfam_LicD
TAL2	6887	genome.wustl.edu	37	9	108425068	108425068	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005421.2	+1	reviewed	p.Q97H	0.001	37	0%	66	39.4%	0	-	benign(0.345)	tolerated(0.19)	neutral(0.159)	NULL
ZNF462	58499	genome.wustl.edu	37	9	109688180	109688180	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021224.4	+1	validated	p.L663I	1.000	178	0%	267	31.5%	1	100%	possibly_damaging(0.892)	deleterious(0)	deleterious(0.796)	superfamily_beta-sandwich domain of Sec23/24
KLF4	9314	genome.wustl.edu	37	9	110249589	110249589	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004235.4	-1	validated	p.P362	0.948	100	0%	142	28.9%	22	36.3%	-	-	-	NULL
CTNNAL1	8727	genome.wustl.edu	37	9	111732758	111732758	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003798.2	-1	provisional	p.R455Q	0.998	140	0%	163	31.9%	38	47.3%	probably_damaging(0.995)	tolerated(0.43)	deleterious(0.471)	superfamily_alpha-catenin/vinculin
FRRS1L	23732	genome.wustl.edu	37	9	111899779	111899779	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014334.2	-1	validated	p.L331M	1.000	84	0%	176	29%	0	-	probably_damaging(0.964)	deleterious(0)	deleterious(0.851)	NULL
EPB41L4B	54566	genome.wustl.edu	37	9	111976099	111976099	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019114.3	-1	validated	e17-1	0.999	115	0%	167	36.5%	0	-	-	-	-	-
PALM2	114299	genome.wustl.edu	37	9	112705127	112705127	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053016.5	+1	validated	p.V222I	0.289	88	0%	233	27.9%	0	-	benign(0.002)	tolerated(0.52)	neutral(0.009)	HMMPfam_Paralemmin
PALM2-AKAP2	445815	genome.wustl.edu	37	9	112899505	112899505	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007203.4	+1	validated	p.F561V	1.000	30	0%	43	48.8%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SVEP1	79987	genome.wustl.edu	37	9	113168920	113168920	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153366.3	-1	validated	p.R2987I	0.998	87	0%	129	34.9%	7	0%	probably_damaging(0.99)	tolerated(0.78)	neutral(0.443)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
SVEP1	79987	genome.wustl.edu	37	9	113170608	113170608	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153366.3	-1	validated	p.P2424	0.798	91	0%	127	24.4%	13	0%	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
SVEP1	79987	genome.wustl.edu	37	9	113173745	113173745	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153366.3	-1	validated	p.F2082L	1.000	50	0%	64	32.8%	4	0%	possibly_damaging(0.882)	tolerated(0.68)	neutral(0.346)	superfamily_Complement control module/SCR domain
SVEP1	79987	genome.wustl.edu	37	9	113173803	113173803	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153366.3	-1	validated	p.A2063V	1.000	52	0%	86	31.4%	5	0%	probably_damaging(0.991)	tolerated(0.16)	deleterious(0.504)	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
MUSK	4593	genome.wustl.edu	37	9	113530173	113530173	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005592.3	+1	reviewed	p.D332Y	0.753	95	0%	106	24.5%	0	-	benign(0.241)	tolerated(0.1)	neutral(0.311)	HMMPfam_Fz
MUSK	4593	genome.wustl.edu	37	9	113562709	113562709	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005592.3	+1	reviewed	p.S684Y	0.026	80	0%	109	34.9%	0	-	benign(0.034)	deleterious(0.01)	neutral(0.408)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
KIAA0368	23392	genome.wustl.edu	37	9	114134715	114134715	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080398.1	-1	provisional	p.V1686I	1.000	93	0%	126	34.1%	51	31.3%	benign(0.243)	tolerated(0.08)	neutral(0.325)	superfamily_ARM repeat
KIAA0368	23392	genome.wustl.edu	37	9	114156007	114156007	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080398.1	-1	provisional	p.L1155H	1.000	61	0%	120	30%	18	44.4%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	superfamily_ARM repeat
KIAA0368	23392	genome.wustl.edu	37	9	114184241	114184241	+	Missense_Mutation	SNP	C	C	T	rs146690306	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080398.1	-1	provisional	p.R650Q	0.998	196	0%	220	32.7%	10	50%	benign(0.029)	tolerated(0.55)	neutral(0.009)	superfamily_ARM repeat
KIAA0368	23392	genome.wustl.edu	37	9	114184307	114184307	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080398.1	-1	provisional	p.R628Q	1.000	196	0%	206	34%	10	30%	probably_damaging(1)	tolerated(0.11)	deleterious(0.772)	superfamily_ARM repeat
ZNF483	158399	genome.wustl.edu	37	9	114296129	114296129	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133464.2	+1	validated	p.R204	0.426	91	0%	204	33.8%	0	-	-	-	-	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
C9orf84	158401	genome.wustl.edu	37	9	114500562	114500562	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173521.3	-1	validated	p.E408G	0.218	143	0%	212	36.8%	0	-	possibly_damaging(0.882)	deleterious(0)	deleterious(0.789)	NULL
C9orf84	158401	genome.wustl.edu	37	9	114548272	114548272	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000374283	-1	known	p.R30Q	0.102	178	0%	231	33.3%	0	-	probably_damaging(0.986)	tolerated(0.34)	neutral(0.458)	NULL
KIAA1958	158405	genome.wustl.edu	37	9	115337223	115337223	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133465.2	+1	predicted	p.S288Y	1.000	175	0%	235	34.9%	1	0%	possibly_damaging(0.685)	deleterious(0)	deleterious(0.689)	NULL
SNX30	401548	genome.wustl.edu	37	9	115598544	115598544	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012994.1	+1	validated	p.G223	0.152	76	0%	114	32.5%	4	75%	-	-	-	NULL
SLC46A2	57864	genome.wustl.edu	37	9	115652644	115652644	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033051.3	-1	validated	p.K106N	1.000	47	0%	68	30.9%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
ZFP37	7539	genome.wustl.edu	37	9	115805169	115805169	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003408.1	-1	provisional	p.E577K	0.867	405	0%	344	33.7%	1	100%	probably_damaging(0.997)	tolerated(0.15)	deleterious(0.707)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZFP37	7539	genome.wustl.edu	37	9	115805792	115805792	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003408.1	-1	provisional	p.R369I	1.000	115	0%	81	37%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_ZnF_C2H2,superfamily_SSF57667
PRPF4	9128	genome.wustl.edu	37	9	116046587	116046587	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004697.3	+1	provisional	p.F224V	1.000	123	0%	224	35.7%	22	45.4%	benign(0.051)	tolerated(0.18)	neutral(0.059)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
WDR31	114987	genome.wustl.edu	37	9	116080895	116080895	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012361.1	-1	reviewed	p.R268Q	0.299	136	0%	270	25.2%	0	-	benign(0.018)	tolerated(0.35)	neutral(0.021)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
BSPRY	54836	genome.wustl.edu	37	9	116132221	116132221	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017688.2	+1	validated	p.F336L	1.000	61	0%	104	35.6%	28	46.4%	probably_damaging(0.987)	tolerated(0.37)	neutral(0.456)	HMMPfam_SPRY,HMMSmart_SM00449
POLE3	54107	genome.wustl.edu	37	9	116171188	116171188	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017443.4	-1	validated	p.S116*	0.811	602	0.2%	1255	35.6%	33	39.3%	-	-	-	superfamily_Histone-fold
C9orf43	257169	genome.wustl.edu	37	9	116175883	116175883	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152786.1	+1	predicted	p.R37Q	0.991	111	0%	180	31.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
COL27A1	85301	genome.wustl.edu	37	9	116931158	116931158	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032888.2	+1	validated	p.R441	0.003	158	0%	288	36.1%	0	-	-	-	-	NULL
COL27A1	85301	genome.wustl.edu	37	9	117050997	117050997	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032888.2	+1	validated	p.R1354*	1.000	181	0%	209	28.7%	0	-	-	-	-	NULL
ORM1	5004	genome.wustl.edu	37	9	117086053	117086053	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000607.2	+1	reviewed	p.E75	0.000	257	0%	464	27.2%	0	-	-	-	-	HMMPfam_Lipocalin,superfamily_Calycin
AKNA	80709	genome.wustl.edu	37	9	117129848	117129848	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030767.4	-1	validated	p.S568Y	0.998	30	0%	23	39.1%	4	0%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
AKNA	80709	genome.wustl.edu	37	9	117138677	117138677	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000394574	-1	known	p.G470	0.001	28	0%	56	42.9%	0	-	-	-	-	NULL
LOC100288716	100288716	genome.wustl.edu	37	9	117266785	117266785	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342950.1	+1	model	p.R191W	0.987	28	0%	28	35.7%	11	45.4%	-	-	-	NULL
TNC	3371	genome.wustl.edu	37	9	117838314	117838314	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002160.2	-1	validated	p.T983A	1.000	157	0%	174	35.1%	128	50.7%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_FN_III-like
TNC	3371	genome.wustl.edu	37	9	117849520	117849520	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002160.2	-1	validated	p.R164W	0.842	42	0%	62	30.6%	72	37.5%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
TNC	3371	genome.wustl.edu	37	9	117853102	117853102	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002160.2	-1	validated	p.V66L	1.000	123	0%	148	30.4%	48	41.6%	probably_damaging(0.99)	tolerated(0.06)	deleterious(0.764)	NULL
ASTN2	23245	genome.wustl.edu	37	9	119188259	119188259	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198187.3	-1	reviewed	p.F1297L	1.000	136	0%	127	29.9%	1	0%	benign(0.235)	tolerated(0.67)	neutral(0.026)	NULL
TRIM32	22954	genome.wustl.edu	37	9	119461819	119461819	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099679.1	+1	reviewed	p.L600I	1.000	215	0%	250	31.6%	17	41.1%	probably_damaging(0.991)	tolerated(0.16)	deleterious(0.504)	HMMPfam_NHL,superfamily_SSF101898
TLR4	7099	genome.wustl.edu	37	9	120475079	120475079	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138554.3	+1	reviewed	p.E225*	0.031	89	0%	43	30.2%	1	100%	-	-	-	HMMSmart_SM00369,superfamily_L domain-like
TLR4	7099	genome.wustl.edu	37	9	120475265	120475265	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138554.3	+1	reviewed	p.E287*	0.772	90	0%	62	37.1%	1	100%	-	-	-	superfamily_L domain-like
TLR4	7099	genome.wustl.edu	37	9	120475379	120475379	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138554.3	+1	reviewed	p.D325Y	0.000	81	0%	68	30.9%	0	-	benign(0)	tolerated(0.11)	neutral(0.272)	superfamily_L domain-like
TLR4	7099	genome.wustl.edu	37	9	120475949	120475949	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138554.3	+1	reviewed	p.A515T	0.014	202	0%	127	30.7%	1	100%	benign(0.004)	tolerated(0.31)	neutral(0.027)	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like
TLR4	7099	genome.wustl.edu	37	9	120476172	120476172	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138554.3	+1	reviewed	p.S589N	0.000	224	0%	154	42.9%	3	0%	benign(0)	tolerated(0.99)	-	HMMSmart_SM00082,superfamily_L domain-like
TLR4	7099	genome.wustl.edu	37	9	120476598	120476598	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138554.3	+1	reviewed	p.R731Q	1.000	136	0%	123	33.3%	6	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain
DBC1	1620	genome.wustl.edu	37	9	121930271	121930271	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014618.2	-1	validated	p.G459	0.995	133	0%	124	35.5%	0	-	-	-	-	NULL
CDK5RAP2	55755	genome.wustl.edu	37	9	123201897	123201897	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018249.4	-1	reviewed	p.E1168*	1.000	201	0%	224	34.4%	6	16.6%	-	-	-	NULL
CDK5RAP2	55755	genome.wustl.edu	37	9	123253735	123253735	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018249.4	-1	reviewed	p.E444D	1.000	227	0%	285	34%	7	85.7%	probably_damaging(0.99)	tolerated(0.08)	deleterious(0.742)	NULL
MEGF9	1955	genome.wustl.edu	37	9	123370051	123370051	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080497.1	-1	provisional	p.V479A	0.583	136	0%	176	24.4%	1	0%	benign(0.002)	deleterious(0.03)	neutral(0.364)	HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00181,superfamily_Growth factor receptor domain
PSMD5	5711	genome.wustl.edu	37	9	123589136	123589136	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005047.2	-1	reviewed	p.R241*	1.000	92	0%	145	29.7%	6	0%	-	-	-	superfamily_ARM-type_fold,HMMPfam_Proteasom_PSMB
TRAF1	7185	genome.wustl.edu	37	9	123667503	123667503	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005658.3	-1	reviewed	p.L349P	1.000	56	0%	114	33.3%	5	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MATH,HMMSmart_SM00061,superfamily_TRAF domain-like
C5	727	genome.wustl.edu	37	9	123782259	123782259	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001735.2	-1	reviewed	p.Y501D	1.000	174	0%	189	31.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_A2M_N_2
CNTRL	11064	genome.wustl.edu	37	9	123850681	123850681	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007018.4	+1	reviewed	p.S26Y	0.977	249	0%	432	31.7%	0	-	probably_damaging(0.995)	tolerated(0.07)	deleterious(0.776)	NULL
CNTRL	11064	genome.wustl.edu	37	9	123857202	123857202	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007018.4	+1	reviewed	p.V129L	1.000	161	0%	266	33.8%	0	-	benign(0.104)	tolerated(0.07)	neutral(0.327)	HMMPfam_LRR_1,HMMSmart_SM00365,superfamily_L domain-like
CNTRL	11064	genome.wustl.edu	37	9	123875841	123875841	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007018.4	+1	reviewed	p.R395I	1.000	99	0%	87	32.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
STOM	2040	genome.wustl.edu	37	9	124111449	124111449	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004099.4	-1	validated	p.K158N	1.000	230	0%	292	31.8%	25	4%	probably_damaging(0.981)	deleterious(0.04)	deleterious(0.774)	HMMPfam_Band_7,HMMSmart_PHB
TTLL11	158135	genome.wustl.edu	37	9	124736324	124736324	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001139442.1	-1	validated	p.R572H	1.000	173	0%	205	31.7%	2	100%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_TTL
LHX6	26468	genome.wustl.edu	37	9	124988681	124988681	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014368.3	-1	reviewed	p.E145D	0.993	28	0%	25	28%	1	0%	benign(0.273)	tolerated(0.28)	neutral(0.060)	HMMPfam_LIM,HMMSmart_LIM,superfamily_SSF57716
RBM18	92400	genome.wustl.edu	37	9	125014177	125014177	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033117.3	-1	validated	p.A63	0.998	133	0%	205	25.4%	15	33.3%	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
OR1N1	138883	genome.wustl.edu	37	9	125288936	125288936	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012363.1	-1	provisional	p.V213I	0.001	102	0%	125	28%	0	-	possibly_damaging(0.766)	tolerated(0.47)	neutral(0.295)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR1N1	138883	genome.wustl.edu	37	9	125289339	125289339	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012363.1	-1	provisional	p.K78N	0.498	158	0%	243	35%	0	-	possibly_damaging(0.779)	deleterious(0.01)	deleterious(0.697)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR1N1	138883	genome.wustl.edu	37	9	125289539	125289539	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012363.1	-1	provisional	p.L12I	0.057	66	0%	112	38.4%	0	-	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	superfamily_Family A G protein-coupled receptor-like
OR1L8	138881	genome.wustl.edu	37	9	125329986	125329986	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004454.1	-1	provisional	p.F257L	0.000	69	0%	166	28.3%	0	-	benign(0.114)	tolerated(0.47)	neutral(0.020)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR1L1	26737	genome.wustl.edu	37	9	125423896	125423896	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005236.3	+1	validated	p.A18T	0.006	79	0%	81	37%	0	-	benign(0.002)	-	-	NULL
OR1L1	26737	genome.wustl.edu	37	9	125423953	125423953	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005236.3	+1	validated	p.I37V	0.000	122	0.8%	136	32.4%	0	-	benign(0.235)	deleterious(0.01)	neutral(0.429)	NULL
OR1L1	26737	genome.wustl.edu	37	9	125424830	125424830	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005236.3	+1	validated	p.V329A	0.012	161	0.6%	214	32.2%	0	-	benign(0.348)	tolerated(0.07)	neutral(0.429)	HMMPfam_7tm_1,superfamily_SSF81321
OR1L3	26735	genome.wustl.edu	37	9	125438156	125438156	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005234.1	+1	provisional	p.L250M	0.004	203	0%	257	32.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR5C1	392391	genome.wustl.edu	37	9	125552054	125552054	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001923.1	+1	provisional	p.F281L	0.997	95	0%	145	31%	0	-	benign(0.203)	deleterious(0.01)	neutral(0.425)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
RC3H2	54542	genome.wustl.edu	37	9	125612078	125612078	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100588.1	-1	validated	p.P1135L	1.000	105	0%	145	26.2%	3	33.3%	benign(0.2)	deleterious(0)	neutral(0.464)	NULL
ZBTB6	10773	genome.wustl.edu	37	9	125673694	125673694	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006626.4	-1	provisional	p.L220I	1.000	82	0%	128	37.5%	2	50%	benign(0.028)	tolerated(0.15)	neutral(0.242)	NULL
GPR21	2844	genome.wustl.edu	37	9	125797697	125797697	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005294.1	+1	provisional	p.F284	0.731	106	0%	148	24.3%	2	0%	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
STRBP	55342	genome.wustl.edu	37	9	125898377	125898377	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018387.4	-1	validated	p.E572D	1.000	289	0%	254	31.1%	47	46.8%	unknown(0)	deleterious(0)	-	HMMPfam_dsrm,HMMSmart_SM00358,superfamily_dsRNA-binding domain-like
STRBP	55342	genome.wustl.edu	37	9	125921443	125921443	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018387.4	-1	validated	p.R256K	1.000	131	0%	145	36.6%	25	44%	probably_damaging(0.964)	tolerated(0.16)	neutral(0.466)	HMMPfam_DZF,HMMSmart_SM00572
STRBP	55342	genome.wustl.edu	37	9	125922743	125922743	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018387.4	-1	validated	e6-2	1.000	85	0%	81	28.4%	0	-	-	-	-	-
CRB2	286204	genome.wustl.edu	37	9	126136934	126136934	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173689.5	+1	validated	p.A1156T	0.941	43	0%	80	36.2%	0	-	benign(0.009)	tolerated(0.28)	neutral(0.032)	HMMSmart_SM00181,superfamily_EGF/Laminin
GPR144	347088	genome.wustl.edu	37	9	127239300	127239300	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000334810	+1	known	p.S938N	0.005	219	0%	318	32.1%	0	-	unknown(0)	deleterious(0)	-	NULL
NR6A1	2649	genome.wustl.edu	37	9	127289152	127289152	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033334.2	-1	reviewed	p.I369	0.917	93	0%	136	36%	1	0%	-	-	-	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain
NR6A1	2649	genome.wustl.edu	37	9	127302467	127302467	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033334.2	-1	reviewed	e5-1	1.000	194	0%	241	34%	0	-	-	-	-	-
NR6A1	2649	genome.wustl.edu	37	9	127306128	127306128	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033334.2	-1	reviewed	p.E132*	1.000	119	0%	132	34.8%	0	-	-	-	-	HMMPfam_zf-C4,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
OLFML2A	169611	genome.wustl.edu	37	9	127572682	127572682	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182487.2	+1	validated	p.F650	0.871	59	0%	118	42.4%	0	-	-	-	-	HMMPfam_OLF,HMMSmart_SM00284
GOLGA1	2800	genome.wustl.edu	37	9	127644812	127644812	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002077.3	-1	reviewed	p.R648W	0.932	57	0%	71	32.4%	3	33.3%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	NULL
PPP6C	5537	genome.wustl.edu	37	9	127951937	127951937	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001123355.1	-1	reviewed	p.E21*	1.000	40	0%	66	31.8%	19	36.8%	-	-	-	NULL
HSPA5	3309	genome.wustl.edu	37	9	128001785	128001785	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005347.3	-1	validated	p.A174T	1.000	122	0%	287	29.3%	1179	42.9%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_HSP70,superfamily_Actin-like ATPase domain
ZBTB34	403341	genome.wustl.edu	37	9	129641995	129641995	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099270.1	+1	validated	p.F102S	1.000	36	0%	71	33.8%	3	100%	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
GARNL3	84253	genome.wustl.edu	37	9	130104557	130104557	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032293.4	+1	validated	p.T399A	1.000	259	0%	304	29.9%	0	-	benign(0.098)	deleterious(0)	neutral(0.452)	HMMPfam_Rap_GAP,superfamily_Rap/Ran-GAP (Pfam 02145)
GARNL3	84253	genome.wustl.edu	37	9	130147366	130147366	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032293.4	+1	validated	p.V777A	1.000	62	0%	104	37.5%	2	50%	possibly_damaging(0.94)	deleterious(0.01)	deleterious(0.790)	HMMPfam_CNH,HMMSmart_SM00036
LRSAM1	90678	genome.wustl.edu	37	9	130245234	130245234	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005373.1	+1	validated	p.R365I	1.000	243	0%	423	26.7%	10	50%	possibly_damaging(0.805)	deleterious(0.01)	deleterious(0.709)	NULL
STXBP1	6812	genome.wustl.edu	37	9	130432199	130432199	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003165.3	+1	reviewed	p.D309Y	1.000	182	0%	233	28.3%	11	36.3%	benign(0.394)	deleterious(0)	deleterious(0.571)	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins
SH2D3C	10044	genome.wustl.edu	37	9	130502055	130502055	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170600.2	-1	validated	p.H771	0.018	18	0%	32	40.6%	11	0%	-	-	-	HMMSmart_SM00147
SH2D3C	10044	genome.wustl.edu	37	9	130513568	130513568	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170600.2	-1	validated	p.E189D	1.000	61	0%	140	32.1%	3	0%	benign(0.032)	tolerated(0.56)	neutral(0.008)	NULL
ST6GALNAC6	30815	genome.wustl.edu	37	9	130648957	130648957	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013443.3	-1	provisional	p.R308H	1.000	263	0.4%	519	33.9%	42	19%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_transf_29
ST6GALNAC6	30815	genome.wustl.edu	37	9	130658538	130658538	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013443.3	-1	provisional	p.E34*	1.000	226	0%	425	32%	11	9%	-	-	-	HMMPfam_Glyco_transf_29
SLC25A25	114789	genome.wustl.edu	37	9	130863393	130863393	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006641.1	+1	validated	p.D94Y	1.000	121	0%	311	35%	6	33.3%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMSmart_EFh,HMMPfam_efhand,superfamily_SSF47473
GOLGA2	2801	genome.wustl.edu	37	9	131024956	131024956	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004486.4	-1	reviewed	p.E313D	0.996	146	0%	326	29.4%	48	39.5%	benign(0.113)	tolerated(0.7)	neutral(0.011)	NULL
COQ4	51117	genome.wustl.edu	37	9	131094467	131094467	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016035.3	+1	validated	p.F146	0.969	40	0%	77	35.1%	56	19.6%	-	-	-	HMMPfam_Coq4
TMSB4XP4	7118	genome.wustl.edu	37	9	131104641	131104641	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000323496	+1	known	p.S44L	0.995	16	0%	50	24%	6	16.6%	probably_damaging(1)	-	-	NULL
ODF2	4957	genome.wustl.edu	37	9	131255048	131255048	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002540.3	+1	reviewed	p.K548N	1.000	163	0%	329	26.1%	75	38.6%	possibly_damaging(0.925)	tolerated(0.29)	neutral(0.403)	NULL
ODF2	4957	genome.wustl.edu	37	9	131256868	131256868	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002540.3	+1	reviewed	p.A587V	0.917	56	0%	110	29.1%	90	41.1%	benign(0.055)	tolerated(0.15)	neutral(0.244)	NULL
GLE1	2733	genome.wustl.edu	37	9	131285061	131285061	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003722.1	+1	reviewed	p.E183*	1.000	70	0%	147	32%	9	11.1%	-	-	-	NULL
SPTAN1	6709	genome.wustl.edu	37	9	131340417	131340417	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130438.1	+1	validated	p.D372Y	1.000	85	0%	128	29.7%	25	12%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
SPTAN1	6709	genome.wustl.edu	37	9	131394744	131394744	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130438.1	+1	validated	p.E2332*	1.000	58	0%	141	40.4%	105	13.3%	-	-	-	HMMSmart_EFh,HMMPfam_efhand,superfamily_SSF47473
SPTAN1	6709	genome.wustl.edu	37	9	131394965	131394965	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130438.1	+1	validated	p.F2376	1.000	38	0%	66	31.8%	149	13.4%	-	-	-	HMMSmart_EFh,HMMPfam_efhand,superfamily_SSF47473
ZER1	10444	genome.wustl.edu	37	9	131513773	131513773	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006336.2	-1	provisional	p.F319L	1.000	134	0%	246	30.9%	32	46.8%	benign(0.011)	tolerated(0.87)	neutral(0.001)	NULL
C9orf114	51490	genome.wustl.edu	37	9	131591390	131591390	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016390.2	-1	validated	p.Q27H	1.000	183	0%	371	31.8%	14	35.7%	probably_damaging(0.961)	deleterious(0.01)	deleterious(0.810)	NULL
LRRC8A	56262	genome.wustl.edu	37	9	131670316	131670316	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127244.1	+1	reviewed	p.F291	0.995	92	0%	253	34.4%	45	51.1%	-	-	-	NULL
DOLK	22845	genome.wustl.edu	37	9	131709350	131709350	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014908.3	-1	reviewed	p.N78S	1.000	66	0%	85	27.1%	23	65.2%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	NULL
PPP2R4	5524	genome.wustl.edu	37	9	131882823	131882823	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178001.1	+1	reviewed	p.Q21H	0.960	87	0%	131	31.3%	57	38.5%	benign(0)	tolerated(0.7)	neutral(0.002)	NULL
FNBP1	23048	genome.wustl.edu	37	9	132719700	132719700	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015033.2	-1	reviewed	p.A151V	1.000	167	0%	323	31.3%	7	14.2%	possibly_damaging(0.767)	deleterious(0.04)	deleterious(0.633)	NULL
GPR107	57720	genome.wustl.edu	37	9	132838715	132838715	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136557.1	+1	validated	p.K94Q	0.994	304	0%	648	35.5%	13	53.8%	possibly_damaging(0.951)	tolerated(0.39)	neutral(0.410)	NULL
LAMC3	10319	genome.wustl.edu	37	9	133907465	133907465	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006059.3	+1	reviewed	p.L238I	0.998	163	0%	243	39.9%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Laminin_N,HMMSmart_LamNT
LAMC3	10319	genome.wustl.edu	37	9	133951327	133951327	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006059.3	+1	reviewed	p.E1202*	0.968	34	0%	61	21.3%	0	-	-	-	-	NULL
LAMC3	10319	genome.wustl.edu	37	9	133952632	133952632	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006059.3	+1	reviewed	p.P1230S	0.004	40	0%	51	35.3%	0	-	benign(0.156)	tolerated(0.29)	neutral(0.043)	NULL
NUP214	8021	genome.wustl.edu	37	9	134073232	134073232	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005085.2	+1	reviewed	p.P1451S	0.000	91	0%	170	44.1%	24	45.8%	possibly_damaging(0.477)	tolerated(0.56)	neutral(0.164)	NULL
PRRC2B	84726	genome.wustl.edu	37	9	134321959	134321959	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013318.3	+1	validated	p.R262Q	1.000	117	0%	289	36.7%	11	18.1%	probably_damaging(0.997)	tolerated(0.45)	deleterious(0.478)	NULL
POMT1	10585	genome.wustl.edu	37	9	134385745	134385745	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000372221	+1	known	p.L64I	0.950	124	0%	240	30.4%	10	40%	benign(0.071)	tolerated(0.43)	neutral(0.018)	NULL
RAPGEF1	2889	genome.wustl.edu	37	9	134463344	134463344	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000414781	-1	known	p.L283I	1.000	94	0%	130	29.2%	7	0%	-	-	-	HMMPfam_RasGEF,superfamily_Ras GEF
SETX	23064	genome.wustl.edu	37	9	135145066	135145066	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015046.5	-1	reviewed	p.L2408S	1.000	161	0%	292	33.2%	11	9%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	superfamily_P-loop containing nucleoside triphosphate hydrolases
SETX	23064	genome.wustl.edu	37	9	135150654	135150654	+	Silent	SNP	G	G	A	rs141497098	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015046.5	-1	reviewed	p.F2363	1.000	294	0%	364	29.1%	13	61.5%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
SETX	23064	genome.wustl.edu	37	9	135173493	135173493	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015046.5	-1	reviewed	p.L1919V	0.006	139	0%	249	30.9%	10	10%	benign(0.344)	deleterious(0.02)	deleterious(0.491)	NULL
SETX	23064	genome.wustl.edu	37	9	135205090	135205090	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015046.5	-1	reviewed	p.R632I	0.003	140	0%	264	31.4%	3	0%	benign(0.029)	deleterious(0)	neutral(0.446)	NULL
DDX31	64794	genome.wustl.edu	37	9	135470417	135470417	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022779.7	-1	reviewed	p.D798N	0.000	179	0%	222	42.8%	8	25%	benign(0)	tolerated(0.54)	neutral(0.007)	NULL
DDX31	64794	genome.wustl.edu	37	9	135522326	135522326	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022779.7	-1	reviewed	p.A468S	0.000	88	0%	123	30.9%	9	55.5%	benign(0.013)	tolerated(0.45)	neutral(0.013)	superfamily_P-loop containing nucleoside triphosphate hydrolases
GTF3C4	9329	genome.wustl.edu	37	9	135554886	135554886	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012204.2	+1	validated	p.S627Y	0.651	97	0%	108	23.1%	20	40%	possibly_damaging(0.74)	deleterious(0.04)	deleterious(0.620)	NULL
TMEM8C	389827	genome.wustl.edu	37	9	136389838	136389838	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080483.2	-1	validated	p.F43	0.998	63	0%	71	29.6%	0	-	-	-	-	NULL
DBH	1621	genome.wustl.edu	37	9	136512992	136512992	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000787.3	+1	reviewed	p.R350H	1.000	113	0%	206	34.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_PHM_PNGase_F
DBH	1621	genome.wustl.edu	37	9	136521701	136521701	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000787.3	+1	reviewed	p.Q497H	0.994	50	0%	76	44.7%	1	0%	benign(0.394)	tolerated(0.13)	neutral(0.379)	superfamily_PHM_PNGase_F,HMMPfam_Cu2_monoox_C
COL5A1	1289	genome.wustl.edu	37	9	137582831	137582831	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000093.3	+1	reviewed	p.F61	0.979	63	0%	94	23.4%	9	0%	-	-	-	HMMSmart_TSPN,superfamily_ConA_like_lec_gl
COL5A1	1289	genome.wustl.edu	37	9	137622285	137622285	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000093.3	+1	reviewed	p.I376	0.050	40	0%	22	36.4%	37	2.7%	-	-	-	NULL
COL5A1	1289	genome.wustl.edu	37	9	137623968	137623968	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000093.3	+1	reviewed	p.E462K	1.000	173	0%	252	37.3%	21	0%	unknown(0)	deleterious(0.01)	-	NULL
COL5A1	1289	genome.wustl.edu	37	9	137630649	137630649	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000093.3	+1	reviewed	p.E497*	1.000	112	0%	111	45%	25	0%	-	-	-	HMMPfam_Collagen
FCN2	2220	genome.wustl.edu	37	9	137774464	137774464	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004108.2	+1	reviewed	p.A65T	0.949	83	0%	85	32.9%	0	-	benign(0.002)	tolerated(0.46)	neutral(0.012)	HMMPfam_Collagen
OLFM1	10439	genome.wustl.edu	37	9	137967613	137967613	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006334.3	+1	reviewed	p.L21I	1.000	61	0%	53	18.9%	0	-	unknown(0)	-	-	NULL
OBP2A	29991	genome.wustl.edu	37	9	138439772	138439772	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000342114	+1	known	p.L67I	0.000	60	0%	52	23.1%	0	-	possibly_damaging(0.875)	tolerated(0.9)	neutral(0.340)	NULL
PAEP	5047	genome.wustl.edu	37	9	138454716	138454716	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001018049.1	+1	reviewed	p.N96S	0.000	139	0%	206	34.5%	0	-	possibly_damaging(0.892)	tolerated(0.44)	neutral(0.364)	HMMPfam_Lipocalin,superfamily_Lipocalins
SOHLH1	402381	genome.wustl.edu	37	9	138585455	138585455	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001101677.1	-1	validated	p.F384L	0.074	57	0%	55	38.2%	0	-	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	NULL
SOHLH1	402381	genome.wustl.edu	37	9	138590844	138590844	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001101677.1	-1	validated	p.R65H	0.975	31	0%	18	27.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HLH,HMMSmart_SM00353,superfamily_HLH helix-loop-helix DNA-binding domain
KCNT1	57582	genome.wustl.edu	37	9	138651585	138651585	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020822.2	+1	validated	p.F305L	1.000	104	0%	103	30.1%	0	-	benign(0.001)	tolerated(1)	-	HMMPfam_Ion_trans_2,superfamily_SSF81324
CAMSAP1	157922	genome.wustl.edu	37	9	138754444	138754444	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015447.3	-1	validated	p.R226Q	1.000	66	0%	147	38.8%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Calponin-homology domain CH-domain
CAMSAP1	157922	genome.wustl.edu	37	9	138773508	138773508	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015447.3	-1	validated	p.E186K	1.000	157	0%	265	32.8%	6	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Calponin-homology domain CH-domain
CAMSAP1	157922	genome.wustl.edu	37	9	138774925	138774925	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015447.3	-1	validated	e2-1	1.000	89	0%	158	44.9%	0	-	-	-	-	-
LHX3	8022	genome.wustl.edu	37	9	139092546	139092546	+	Missense_Mutation	SNP	T	T	C	rs137854506		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014564.2	-1	reviewed	p.K50E	1.000	61	0%	61	36.1%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_LIM,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
QSOX2	169714	genome.wustl.edu	37	9	139103194	139103194	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181701.3	-1	validated	p.E489*	0.994	170	0%	224	36.6%	3	33.3%	-	-	-	HMMPfam_Evr1_Alr,superfamily_Evr1_Alr
CARD9	64170	genome.wustl.edu	37	9	139264979	139264979	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052813.4	-1	reviewed	p.V268I	0.001	33	0%	31	22.6%	3	0%	benign(0)	tolerated(0.79)	neutral(0.001)	NULL
SEC16A	9919	genome.wustl.edu	37	9	139369263	139369263	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014866.1	-1	validated	p.E935D	0.001	71	0%	223	38.1%	24	37.5%	unknown(0)	tolerated(0.41)	-	NULL
NOTCH1	4851	genome.wustl.edu	37	9	139390733	139390733	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017617.3	-1	reviewed	p.S2486	0.652	38	0%	72	34.7%	14	14.2%	-	-	-	NULL
NOTCH1	4851	genome.wustl.edu	37	9	139409974	139409974	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017617.3	-1	reviewed	p.D622N	0.668	73	0%	85	44.7%	3	33.3%	possibly_damaging(0.568)	tolerated(0.2)	neutral(0.243)	PatternScan_ASX_HYDROXYL,HMMSmart_EGF_CA,HMMPfam_EGF,PatternScan_EGF_CA,superfamily_SSF57196
LCN8	138307	genome.wustl.edu	37	9	139650800	139650800	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000392896	-1	known	p.F35L	0.256	26	0%	47	27.7%	1	0%	-	-	-	NULL
FBXW5	54461	genome.wustl.edu	37	9	139837071	139837071	+	Silent	SNP	G	G	T	rs2292926	byCluster;byFrequency;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018998.2	-1	reviewed	p.L201	0.802	21	0%	34	47.1%	101	38.6%	-	-	-	superfamily_WD40 repeat-like
C8G	733	genome.wustl.edu	37	9	139841140	139841140	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000606.2	+1	validated	p.D198	0.963	60	0%	63	33.3%	0	-	-	-	-	superfamily_Calycin
GRIN1	2902	genome.wustl.edu	37	9	140036545	140036545	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007327.3	+1	reviewed	p.F113L	1.000	228	0%	610	31.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRIN1	2902	genome.wustl.edu	37	9	140051426	140051426	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007327.3	+1	reviewed	p.T302S	1.000	15	0.000	9	0.444	0	-	benign(0.097)	tolerated(0.56)	neutral(0.014)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
EXD3	54932	genome.wustl.edu	37	9	140243727	140243727	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017820.3	-1	validated	p.D555	0.690	22	0%	24	54.2%	4	25%	-	-	-	HMMPfam_3_5_exonuc,HMMSmart_35EXOc,superfamily_RNaseH_fold
NELF	26012	genome.wustl.edu	37	9	140350900	140350900	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130969.1	-1	reviewed	p.L223I	1.000	101	0%	226	31.4%	28	28.5%	possibly_damaging(0.712)	tolerated(0.16)	neutral(0.317)	NULL
PNPLA7	375775	genome.wustl.edu	37	9	140354922	140354922	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098537.1	-1	validated	p.E1318K	0.014	30	0%	56	39.3%	4	0%	possibly_damaging(0.806)	tolerated(0.25)	neutral(0.340)	NULL
PNPLA7	375775	genome.wustl.edu	37	9	140437885	140437885	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098537.1	-1	validated	p.R169W	0.926	41	0%	83	31.3%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_cAMP-binding domain-like
PNPLA7	375775	genome.wustl.edu	37	9	140441761	140441761	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098537.1	-1	validated	p.R65*	0.460	74	0%	183	32.2%	0	-	-	-	-	NULL
WDR85	92715	genome.wustl.edu	37	9	140450084	140450084	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138778.2	-1	provisional	p.A322	0.000	48	0%	61	37.7%	41	31.7%	-	-	-	superfamily_WD40_like
EHMT1	79813	genome.wustl.edu	37	9	140622832	140622832	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000460843	+1	known	p.R225Q	0.364	143	0%	342	28.1%	13	38.4%	probably_damaging(0.997)	tolerated(0.53)	deleterious(0.474)	NULL
EHMT1	79813	genome.wustl.edu	37	9	140637978	140637978	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000460843	+1	known	p.K327E	1.000	88	0%	187	29.9%	22	50%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
EHMT1	79813	genome.wustl.edu	37	9	140712560	140712560	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000460843	+1	known	p.E1170D	0.950	206	0%	335	37.3%	64	34.3%	benign(0)	tolerated(1)	-	HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain
CACNA1B	774	genome.wustl.edu	37	9	140865908	140865908	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000718.2	+1	validated	p.K469	1.000	225	0%	346	33.5%	0	-	-	-	-	NULL
CACNA1B	774	genome.wustl.edu	37	9	140952676	140952676	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000718.2	+1	validated	p.S1428P	1.000	389	0%	646	33.1%	0	-	probably_damaging(0.996)	deleterious(0.05)	deleterious(0.807)	NULL
CACNA1B	774	genome.wustl.edu	37	9	141006878	141006878	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000718.2	+1	validated	p.A1819	0.981	111	0%	162	32.1%	0	-	-	-	-	NULL
FAM157B	100132403	genome.wustl.edu	37	9	141109830	141109830	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145249.1	+1	inferred	p.F153L	0.021	221	0%	336	32.7%	0	-	-	-	-	NULL
DIP2C	22982	genome.wustl.edu	37	10	329301	329301	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014974.2	-1	reviewed	p.R1402I	0.627	205	0%	357	30.5%	5	20%	possibly_damaging(0.904)	deleterious(0)	deleterious(0.803)	HMMPfam_AMP-binding,superfamily_SSF56801
DIP2C	22982	genome.wustl.edu	37	10	332272	332272	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014974.2	-1	reviewed	p.R1354W	1.000	284	0%	329	60.5%	3	100%	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	HMMPfam_AMP-binding,superfamily_SSF56801
LARP4B	23185	genome.wustl.edu	37	10	860918	860918	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000448368	-1	known	p.R162*	0.046	76	0%	106	34%	27	51.8%	-	-	-	NULL
IDI2-AS1	55853	genome.wustl.edu	37	10	1089812	1089812	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_024628.1	+1	validated	NULL	0.000	74	0%	134	41.8%	3	0%	-	-	-	-
ADARB2	105	genome.wustl.edu	37	10	1279761	1279761	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018702.2	-1	reviewed	p.S463L	1.000	130	0%	178	38.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_A_deamin,HMMSmart_ADEAMc
PITRM1	10531	genome.wustl.edu	37	10	3190225	3190225	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014889.2	-1	validated	p.R675*	0.990	285	0%	373	32.7%	17	23.5%	-	-	-	superfamily_LuxS/MPP-like metallohydrolase,HMMPfam_M16C_assoc
PITRM1	10531	genome.wustl.edu	37	10	3201188	3201188	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014889.2	-1	validated	p.L352F	1.000	134	0%	292	32.5%	10	0%	possibly_damaging(0.794)	deleterious(0.01)	deleterious(0.704)	HMMPfam_Peptidase_M16_C,superfamily_LuxS/MPP-like metallohydrolase
KLF6	1316	genome.wustl.edu	37	10	3824115	3824115	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001300.5	-1	reviewed	p.E132K	0.570	109	0%	173	32.9%	33	48.4%	benign(0.156)	tolerated(0.69)	neutral(0.016)	NULL
AKR1C1	1645	genome.wustl.edu	37	10	5005678	5005678	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001353.5	+1	reviewed	p.H14Q	0.009	366	0%	547	32.4%	2	50%	benign(0.055)	tolerated(0.41)	neutral(0.018)	HMMPfam_Aldo_ket_red,superfamily_Aldo/ket_red
AKR1C2	1646	genome.wustl.edu	37	10	5037992	5037992	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001354.4	-1	reviewed	p.V212	0.006	247	0%	314	26.8%	11	90.9%	-	-	-	HMMPfam_Aldo_ket_red,superfamily_Aldo/ket_red
AKR1C2	1646	genome.wustl.edu	37	10	5041445	5041445	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001354.4	-1	reviewed	p.D132Y	0.729	751	0%	932	20.3%	3	100%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Aldo_ket_red,superfamily_Aldo/ket_red
TUBAL3	79861	genome.wustl.edu	37	10	5435795	5435795	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024803.2	-1	validated	p.T342	0.986	124	0%	184	37.5%	0	-	-	-	-	superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C
TUBAL3	79861	genome.wustl.edu	37	10	5443009	5443009	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024803.2	-1	validated	p.Q15H	1.000	93	0%	146	34.2%	0	-	possibly_damaging(0.867)	deleterious(0.01)	deleterious(0.742)	HMMPfam_Tubulin,superfamily_Tubulin nucleotide-binding domain-like
ASB13	79754	genome.wustl.edu	37	10	5683746	5683746	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024701.3	-1	reviewed	p.F232	0.073	117	0%	156	31.4%	6	16.6%	-	-	-	NULL
FAM208B	54906	genome.wustl.edu	37	10	5772917	5772917	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017782.4	+1	validated	p.E319*	0.997	145	0%	234	35.9%	0	-	-	-	-	NULL
FAM208B	54906	genome.wustl.edu	37	10	5781613	5781613	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017782.4	+1	validated	p.E494*	0.985	91	0%	152	37.5%	2	0%	-	-	-	NULL
FAM208B	54906	genome.wustl.edu	37	10	5782424	5782424	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017782.4	+1	validated	p.N764I	1.000	51	0%	90	33.3%	0	-	possibly_damaging(0.822)	deleterious(0)	deleterious(0.756)	NULL
PRKCQ	5588	genome.wustl.edu	37	10	6470298	6470298	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000397178	-1	known	p.S437L	1.000	148	0%	217	35.5%	1	0%	-	-	-	HMMSmart_SM00133,HMMPfam_Pkinase_C
SFMBT2	57713	genome.wustl.edu	37	10	7217977	7217977	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029880.1	-1	provisional	p.C653	0.998	252	0%	450	27.8%	0	-	-	-	-	NULL
SFMBT2	57713	genome.wustl.edu	37	10	7325982	7325982	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029880.1	-1	provisional	p.R219H	1.000	149	0%	214	28%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_MBT,HMMSmart_SM00561,superfamily_Tudor/PWWP/MBT
ITIH5	80760	genome.wustl.edu	37	10	7611706	7611706	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030569.5	-1	validated	p.R692G	1.000	43	0%	76	35.5%	0	-	benign(0.001)	tolerated(0.14)	neutral(0.249)	NULL
ITIH5	80760	genome.wustl.edu	37	10	7615128	7615128	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030569.5	-1	validated	p.R670I	1.000	363	0%	527	33.8%	2	0%	benign(0.016)	tolerated(0.28)	neutral(0.032)	NULL
ITIH5	80760	genome.wustl.edu	37	10	7627889	7627889	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030569.5	-1	validated	p.Y361	1.000	189	0%	276	31.2%	0	-	-	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
ITIH5	80760	genome.wustl.edu	37	10	7659204	7659204	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030569.5	-1	validated	p.E232*	0.988	265	0%	332	25%	0	-	-	-	-	NULL
ITIH2	3698	genome.wustl.edu	37	10	7747143	7747143	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002216.2	+1	validated	p.Q53*	0.972	96	0%	126	23.8%	0	-	-	-	-	NULL
CELF2	10659	genome.wustl.edu	37	10	11299737	11299737	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006561.3	+1	reviewed	p.S147L	1.000	142	0%	216	33.3%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
USP6NL	9712	genome.wustl.edu	37	10	11543105	11543105	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080491.2	-1	validated	p.Y144H	1.000	129	0%	160	34.4%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p
USP6NL	9712	genome.wustl.edu	37	10	11560539	11560539	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080491.2	-1	validated	p.E81*	1.000	162	0%	157	32.5%	7	42.8%	-	-	-	NULL
UPF2	26019	genome.wustl.edu	37	10	11994105	11994105	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015542.2	-1	reviewed	p.R998	1.000	236	0%	418	27.3%	9	33.3%	-	-	-	superfamily_ARM repeat
SEC61A2	55176	genome.wustl.edu	37	10	12211256	12211256	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142627.1	+1	reviewed	e12-1	0.010	199	0%	424	29%	0	-	-	-	-	-
CAMK1D	57118	genome.wustl.edu	37	10	12833167	12833167	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153498.2	+1	reviewed	p.V192	1.000	274	0%	425	36%	13	15.3%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
CAMK1D	57118	genome.wustl.edu	37	10	12870810	12870810	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153498.2	+1	reviewed	p.S361L	0.208	84	0%	97	40.2%	7	14.2%	benign(0.076)	deleterious(0.01)	neutral(0.411)	NULL
MCM10	55388	genome.wustl.edu	37	10	13214724	13214724	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182751.2	+1	validated	p.R185I	0.504	96	0%	143	35%	3	33.3%	benign(0.143)	deleterious(0.03)	neutral(0.377)	NULL
SEPHS1	22929	genome.wustl.edu	37	10	13386914	13386914	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012247.3	-1	reviewed	p.E13K	1.000	90	0%	177	37.3%	23	52.1%	benign(0.139)	tolerated(0.06)	neutral(0.335)	NULL
CDNF	441549	genome.wustl.edu	37	10	14870191	14870191	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029954.2	-1	validated	p.E66*	1.000	301	0%	411	29.4%	1	0%	-	-	-	HMMPfam_Armet
HSPA14	51182	genome.wustl.edu	37	10	14890847	14890847	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016299.2	+1	validated	p.F110C	1.000	54	0%	61	44.3%	6	50%	benign(0.229)	tolerated(0.18)	neutral(0.079)	HMMPfam_HSP70,superfamily_Actin-like ATPase domain
HSPA14	51182	genome.wustl.edu	37	10	14894448	14894448	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016299.2	+1	validated	p.L218I	1.000	186	0%	281	32.4%	10	50%	probably_damaging(0.996)	deleterious(0.05)	deleterious(0.807)	HMMPfam_HSP70,superfamily_Actin-like ATPase domain
HSPA14	51182	genome.wustl.edu	37	10	14896175	14896175	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016299.2	+1	validated	p.T262	1.000	145	0%	200	33.5%	9	22.2%	-	-	-	HMMPfam_HSP70,superfamily_Actin-like ATPase domain
DCLRE1C	64421	genome.wustl.edu	37	10	14951015	14951015	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033855.1	-1	reviewed	p.V491L	0.039	113	0%	145	31.7%	1	0%	benign(0.052)	tolerated(0.06)	neutral(0.326)	NULL
DCLRE1C	64421	genome.wustl.edu	37	10	14974935	14974935	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033855.1	-1	reviewed	p.D233G	1.000	147	0%	352	28.4%	2	50%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
OLAH	55301	genome.wustl.edu	37	10	15107645	15107645	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018324.2	+1	validated	p.Y208	0.000	89	0%	141	29.1%	0	-	-	-	-	HMMPfam_Thioesterase,superfamily_SSF53474
RPP38	10557	genome.wustl.edu	37	10	15145497	15145497	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001097590.1	+1	validated	p.D62Y	0.027	48	0%	111	33.3%	16	43.7%	probably_damaging(0.997)	tolerated(0.05)	deleterious(0.811)	NULL
RPP38	10557	genome.wustl.edu	37	10	15145662	15145662	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001097590.1	+1	validated	p.V117I	0.603	70	0%	141	34.8%	43	39.5%	benign(0.073)	tolerated(1)	neutral(0.005)	HMMPfam_Ribosomal_L7Ae,superfamily_SSF55315
NMT2	9397	genome.wustl.edu	37	10	15161458	15161458	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004808.2	-1	reviewed	p.R352*	0.700	228	0%	441	22.9%	1	0%	-	-	-	HMMPfam_NMT_C,superfamily_Acyl-CoA N-acyltransferases (Nat)
FAM171A1	221061	genome.wustl.edu	37	10	15255565	15255565	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010924.1	-1	validated	p.N674	0.932	97	0%	208	33.7%	10	10%	-	-	-	HMMPfam_UPF0560
ITGA8	8516	genome.wustl.edu	37	10	15688894	15688894	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003638.1	-1	provisional	p.F386	0.957	155	0%	231	29%	0	-	-	-	-	HMMSmart_Int_alpha,superfamily_SSF69318
LOC100287543	100287543	genome.wustl.edu	37	10	16859113	16859113	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342962.1	+1	model	p.A41V	0.312	82	0%	83	41%	4	25%	-	-	-	NULL
CUBN	8029	genome.wustl.edu	37	10	16870882	16870882	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001081.3	-1	reviewed	p.G3562	0.997	155	0%	214	31.3%	4	0%	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CUBN	8029	genome.wustl.edu	37	10	16916380	16916380	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001081.3	-1	reviewed	p.E3077K	0.009	180	0%	275	34.2%	0	-	benign(0.282)	tolerated(0.91)	neutral(0.086)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
CUBN	8029	genome.wustl.edu	37	10	16948316	16948316	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001081.3	-1	reviewed	p.E2600K	1.000	222	0%	303	30.4%	0	-	probably_damaging(0.999)	tolerated(0.46)	deleterious(0.502)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
TRDMT1	1787	genome.wustl.edu	37	10	17195597	17195597	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004412.5	-1	reviewed	p.Q328H	1.000	352	0%	477	31.7%	5	20%	possibly_damaging(0.91)	tolerated(0.05)	deleterious(0.708)	superfamily_S-adenosyl-L-methionine-dependent methyltransferases
ST8SIA6	338596	genome.wustl.edu	37	10	17363213	17363213	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000440449	-1	known	p.R108*	0.117	170	0%	114	33.3%	0	-	-	-	-	NULL
PLXDC2	84898	genome.wustl.edu	37	10	20290840	20290840	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032812.7	+1	provisional	p.G83	0.960	116	0%	99	31.3%	8	25%	-	-	-	NULL
PLXDC2	84898	genome.wustl.edu	37	10	20466309	20466309	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032812.7	+1	provisional	p.F344L	1.000	185	0%	151	29.1%	8	62.5%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_PSI,HMMSmart_SM00423
NEBL	10529	genome.wustl.edu	37	10	21115412	21115412	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006393.2	-1	reviewed	p.I611	0.905	287	0%	224	28.1%	0	-	-	-	-	HMMPfam_Nebulin,HMMSmart_SM00227
NEBL	10529	genome.wustl.edu	37	10	21158735	21158735	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006393.2	-1	reviewed	p.T172	0.005	279	0%	245	35.9%	1	0%	-	-	-	NULL
NEBL	10529	genome.wustl.edu	37	10	21185889	21185889	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006393.2	-1	reviewed	p.D51N	1.000	233	0%	339	31%	0	-	benign(0.19)	deleterious(0.02)	neutral(0.401)	HMMPfam_Nebulin,HMMSmart_SM00227
MLLT10	8028	genome.wustl.edu	37	10	22022911	22022911	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004641.2	+1	validated	p.G920D	1.000	115	0%	213	40.8%	6	33.3%	possibly_damaging(0.753)	deleterious(0)	deleterious(0.721)	NULL
BMI1	648	genome.wustl.edu	37	10	22618428	22618428	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005180.6	+1	validated	p.R313Q	1.000	300	0%	435	34.7%	38	47.3%	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	NULL
ARMC3	219681	genome.wustl.edu	37	10	23297298	23297298	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173081.3	+1	validated	p.K641N	0.643	69	0%	93	36.6%	2	100%	probably_damaging(0.998)	tolerated(0.12)	deleterious(0.735)	NULL
ARMC3	219681	genome.wustl.edu	37	10	23319619	23319619	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173081.3	+1	validated	p.E714*	1.000	357	0%	353	32%	6	16.6%	-	-	-	NULL
MSRB2	22921	genome.wustl.edu	37	10	23393122	23393122	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012228.3	+1	validated	p.K56N	1.000	90	0%	172	43.6%	28	25%	probably_damaging(0.959)	deleterious(0.04)	deleterious(0.752)	HMMPfam_SelR,superfamily_Mss4_like
C10orf67	256815	genome.wustl.edu	37	10	23611441	23611441	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153714.2	-1	validated	p.F119C	1.000	77	0%	116	34.5%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
C10orf67	256815	genome.wustl.edu	37	10	23633511	23633511	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153714.2	-1	validated	p.R66C	0.032	21	0%	46	19.6%	0	-	possibly_damaging(0.878)	deleterious(0)	deleterious(0.786)	NULL
KIAA1217	56243	genome.wustl.edu	37	10	24783450	24783450	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019590.3	+1	validated	p.E567D	1.000	152	0%	207	29%	2	50%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
KIAA1217	56243	genome.wustl.edu	37	10	24813448	24813448	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019590.3	+1	validated	p.R885C	1.000	38	0%	54	25.9%	43	44.1%	benign(0.346)	deleterious(0.01)	deleterious(0.515)	NULL
KIAA1217	56243	genome.wustl.edu	37	10	24834988	24834988	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019590.3	+1	validated	p.S1856Y	1.000	447	0%	775	32.8%	66	48.4%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
ARHGAP21	57584	genome.wustl.edu	37	10	24873933	24873933	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020824.3	-1	validated	p.K1762T	0.867	101	0%	146	39.7%	12	33.3%	possibly_damaging(0.485)	deleterious(0.02)	deleterious(0.544)	NULL
ARHGAP21	57584	genome.wustl.edu	37	10	24874495	24874495	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020824.3	-1	validated	p.E1575K	0.998	111	0%	138	36.2%	20	50%	benign(0.063)	tolerated(0.16)	neutral(0.064)	NULL
ARHGAP21	57584	genome.wustl.edu	37	10	24909625	24909625	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020824.3	-1	validated	p.R400Q	0.989	187	0%	293	32.4%	0	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
ARHGAP21	57584	genome.wustl.edu	37	10	24910065	24910065	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020824.3	-1	validated	p.S253	0.996	185	0%	284	26.1%	4	50%	-	-	-	NULL
THNSL1	79896	genome.wustl.edu	37	10	25313379	25313379	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024838.4	+1	validated	p.E409D	0.938	208	0%	354	33.9%	5	60%	probably_damaging(0.991)	tolerated(0.18)	deleterious(0.500)	HMMPfam_PALP,superfamily_Tryptophan synthase beta subunit-like PLP-dependent enzymes
MYO3A	53904	genome.wustl.edu	37	10	26310490	26310490	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017433.4	+1	reviewed	p.S215F	1.000	150	0%	191	34.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
MYO3A	53904	genome.wustl.edu	37	10	26385314	26385314	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017433.4	+1	reviewed	p.E523*	1.000	60	0%	70	24.3%	0	-	-	-	-	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYO3A	53904	genome.wustl.edu	37	10	26446390	26446390	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017433.4	+1	reviewed	p.R982I	1.000	184	0%	217	39.2%	0	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYO3A	53904	genome.wustl.edu	37	10	26446396	26446396	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017433.4	+1	reviewed	p.R984Q	1.000	181	0%	201	29.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYO3A	53904	genome.wustl.edu	37	10	26462887	26462887	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017433.4	+1	reviewed	p.K1232E	0.008	135	0%	255	35.3%	0	-	benign(0.005)	tolerated(0.43)	neutral(0.013)	superfamily_SSF52540
MYO3A	53904	genome.wustl.edu	37	10	26463081	26463081	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017433.4	+1	reviewed	p.Q1296H	0.023	114	0%	178	38.2%	0	-	benign(0.313)	deleterious(0)	deleterious(0.542)	superfamily_SSF52540
MYO3A	53904	genome.wustl.edu	37	10	26463432	26463432	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017433.4	+1	reviewed	p.D1413E	0.000	114	0%	205	33.7%	0	-	benign(0.001)	tolerated(0.69)	neutral(0.002)	NULL
APBB1IP	54518	genome.wustl.edu	37	10	26849126	26849126	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019043.3	+1	validated	p.I416M	0.027	83	1.2%	117	34.2%	5	0%	-	-	-	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
ABI1	10006	genome.wustl.edu	37	10	27037669	27037669	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005470.3	-1	validated	p.A453T	1.000	164	0%	164	29.3%	41	46.3%	probably_damaging(0.987)	tolerated(0.14)	deleterious(0.686)	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
ABI1	10006	genome.wustl.edu	37	10	27040543	27040543	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005470.3	-1	validated	p.K445N	0.998	233	0%	298	33.2%	43	46.5%	benign(0.148)	deleterious(0.01)	neutral(0.419)	superfamily_SH3-domain
YME1L1	10730	genome.wustl.edu	37	10	27406634	27406634	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139312.1	-1	reviewed	p.E587D	1.000	272	0%	565	31.5%	108	37%	probably_damaging(0.969)	tolerated(0.11)	deleterious(0.683)	HMMPfam_Peptidase_M41,superfamily_P-loop containing nucleoside triphosphate hydrolases
LOC100288039	100288039	genome.wustl.edu	37	10	27568050	27568050	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342965.1	+1	model	p.A53S	0.010	187	0%	197	27.9%	0	-	-	-	-	NULL
LOC100288039	100288039	genome.wustl.edu	37	10	27568195	27568195	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002342965.1	+1	model	p.N101T	0.005	180	0%	203	27.6%	0	-	-	-	-	NULL
ARMC4	55130	genome.wustl.edu	37	10	28151480	28151480	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018076.2	-1	validated	p.N894	1.000	191	0%	269	32.3%	0	-	-	-	-	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
ARMC4	55130	genome.wustl.edu	37	10	28223994	28223994	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018076.2	-1	validated	p.L814I	0.997	205	0%	275	28.7%	0	-	probably_damaging(0.999)	tolerated(0.09)	deleterious(0.787)	HMMSmart_SM00185,superfamily_ARM repeat
ARMC4	55130	genome.wustl.edu	37	10	28229547	28229547	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018076.2	-1	validated	p.S644Y	0.459	97	0%	142	33.8%	2	0%	benign(0.009)	deleterious(0.04)	neutral(0.349)	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
MPP7	143098	genome.wustl.edu	37	10	28420522	28420522	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173496.3	-1	validated	p.K138N	1.000	226	0%	298	38.9%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_PDZ
BAMBI	25805	genome.wustl.edu	37	10	28970244	28970244	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012342.2	+1	reviewed	p.K45T	1.000	147	0%	254	36.6%	217	41%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_BAMBI,superfamily_SSF57302
LYZL1	84569	genome.wustl.edu	37	10	29599959	29599959	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032517.4	+1	validated	p.E186K	0.972	211	0%	398	34.9%	0	-	benign(0.001)	tolerated(0.19)	neutral(0.050)	HMMPfam_Lys,HMMSmart_LYZ1,superfamily_SSF53955
SVIL	6840	genome.wustl.edu	37	10	29770550	29770550	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021738.2	-1	reviewed	p.S1688L	0.665	147	0%	184	24.5%	8	0%	benign(0)	tolerated(0.18)	neutral(0.056)	superfamily_Actin depolymerizing proteins
SVIL	6840	genome.wustl.edu	37	10	29776147	29776147	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021738.2	-1	reviewed	p.P1477H	0.999	117	0%	195	36.9%	7	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00262,HMMPfam_Gelsolin,superfamily_Actin depolymerizing proteins
SVIL	6840	genome.wustl.edu	37	10	29782231	29782231	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021738.2	-1	reviewed	p.F1311V	1.000	224	0%	444	31.8%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SVIL	6840	genome.wustl.edu	37	10	29813568	29813568	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021738.2	-1	reviewed	p.E807*	1.000	236	0%	394	33.2%	2	0%	-	-	-	NULL
KIAA1462	57608	genome.wustl.edu	37	10	30317346	30317346	+	Missense_Mutation	SNP	C	C	A	rs12769728		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020848.2	-1	validated	p.E577D	0.994	103	0%	154	34.4%	0	-	probably_damaging(0.99)	tolerated(0.25)	deleterious(0.478)	NULL
MTPAP	55149	genome.wustl.edu	37	10	30604896	30604896	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018109.3	-1	validated	p.R461Q	1.000	77	0%	64	32.8%	13	53.8%	probably_damaging(1)	tolerated(0.16)	deleterious(0.559)	HMMPfam_PAP_assoc,superfamily_PAP/OAS1 substrate-binding domain
MAP3K8	1326	genome.wustl.edu	37	10	30748379	30748379	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005204.2	+1	reviewed	p.R408C	1.000	58	0%	117	33.3%	3	0%	possibly_damaging(0.944)	deleterious(0.02)	deleterious(0.772)	NULL
LYZL2	119180	genome.wustl.edu	37	10	30901771	30901771	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183058.2	-1	validated	p.E165D	0.764	179	0%	272	29%	0	-	benign(0.008)	tolerated(0.65)	neutral(0.003)	HMMPfam_Lys,HMMSmart_LYZ1,superfamily_SSF53955
LOC645954	645954	genome.wustl.edu	37	10	30982478	30982478	+	RNA	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_017086.3	+1	model	NULL	0.997	34	0%	34	44.1%	0	-	-	-	-	-
LOC645954	645954	genome.wustl.edu	37	10	30986322	30986322	+	RNA	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_017086.3	+1	model	NULL	1.000	62	0%	69	30.4%	0	-	-	-	-	-
LOC645954	645954	genome.wustl.edu	37	10	30987341	30987341	+	RNA	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_017086.3	+1	model	NULL	1.000	156	0%	235	28.9%	1	0%	-	-	-	-
LOC645954	645954	genome.wustl.edu	37	10	31001528	31001528	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_017086.3	+1	model	NULL	1.000	70	0%	136	27.2%	0	-	-	-	-	-
LOC645954	645954	genome.wustl.edu	37	10	31006008	31006008	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_017086.3	+1	model	NULL	1.000	57	0%	76	27.6%	1	0%	-	-	-	-
ZNF438	220929	genome.wustl.edu	37	10	31134277	31134277	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143766.1	-1	validated	p.D700	0.945	120	0%	172	36%	6	0%	-	-	-	NULL
ZNF438	220929	genome.wustl.edu	37	10	31137837	31137837	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143766.1	-1	validated	p.F499L	0.000	188	0%	273	33.3%	4	0%	benign(0.019)	tolerated(0.32)	neutral(0.025)	NULL
ZNF438	220929	genome.wustl.edu	37	10	31138155	31138155	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143766.1	-1	validated	p.I393M	0.860	55	0%	104	36.5%	2	50%	benign(0.119)	deleterious(0)	neutral(0.454)	NULL
ZEB1	6935	genome.wustl.edu	37	10	31809072	31809072	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030751.5	+1	reviewed	p.C270Y	1.000	55	0%	53	30.2%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZEB1	6935	genome.wustl.edu	37	10	31809210	31809210	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030751.5	+1	reviewed	p.L316R	1.000	209	0%	203	36%	1	0%	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	NULL
ZEB1	6935	genome.wustl.edu	37	10	31810481	31810481	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030751.5	+1	reviewed	p.P740S	1.000	123	0%	124	29%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ARHGAP12	94134	genome.wustl.edu	37	10	32099583	32099583	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018287.5	-1	provisional	p.E682*	1.000	182	0%	165	35.2%	7	14.2%	-	-	-	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
ARHGAP12	94134	genome.wustl.edu	37	10	32197781	32197781	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018287.5	-1	provisional	p.M1I	0.134	208	0%	381	25.2%	4	0%	benign(0)	tolerated(0.66)	neutral(0.003)	NULL
ENSG00000222309	0	genome.wustl.edu	37	10	32635874	32635874	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000410377	-1	novel	NULL	1.000	20	0%	44	50%	0	-	-	-	-	-
C10orf68	79741	genome.wustl.edu	37	10	32863455	32863455	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000375030	+1	known	e0+1	0.693	64	0%	100	30%	0	-	-	-	-	-
C10orf68	79741	genome.wustl.edu	37	10	33135308	33135308	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024688.2	+1	validated	p.T446	0.087	90	0%	63	33.3%	0	-	-	-	-	NULL
C10orf68	79741	genome.wustl.edu	37	10	33137625	33137625	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024688.2	+1	validated	p.L535V	0.003	87	0%	101	24.8%	0	-	possibly_damaging(0.791)	deleterious(0)	deleterious(0.741)	NULL
NRP1	8829	genome.wustl.edu	37	10	33545339	33545339	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003873.5	-1	validated	p.S240L	0.993	101	0%	130	31.5%	15	0%	possibly_damaging(0.794)	deleterious(0)	deleterious(0.742)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
PARD3	56288	genome.wustl.edu	37	10	34759192	34759192	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019619.3	-1	validated	e4-1	1.000	68	0%	123	39%	0	-	-	-	-	-
CUL2	8453	genome.wustl.edu	37	10	35320512	35320512	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003591.2	-1	provisional	p.S402	0.998	186	0%	271	31%	18	61.1%	-	-	-	HMMPfam_Cullin,superfamily_Cullin homology domain
CUL2	8453	genome.wustl.edu	37	10	35351902	35351902	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003591.2	-1	provisional	p.R70W	1.000	130	0%	170	29.4%	7	71.4%	possibly_damaging(0.76)	deleterious(0.01)	deleterious(0.687)	HMMPfam_Cullin,superfamily_Cullin repeat
CREM	1390	genome.wustl.edu	37	10	35495976	35495976	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181571.1	+1	reviewed	p.N251T	1.000	71	0%	107	34.6%	26	26.9%	benign(0.3)	deleterious(0)	deleterious(0.537)	HMMSmart_SM00338,PatternScan_BZIP_BASIC,HMMPfam_bZIP_1
NAMPTL	646309	genome.wustl.edu	37	10	36811851	36811851	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000440465	-1	known	p.L438F	1.000	270	0%	384	28.9%	9	0%	possibly_damaging(0.941)	tolerated(0.06)	deleterious(0.709)	HMMPfam_NAPRTase
NAMPTL	646309	genome.wustl.edu	37	10	36812080	36812080	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000440465	-1	known	p.F361	0.998	249	0%	439	27.8%	3	0%	-	-	-	HMMPfam_NAPRTase
ANKRD30A	91074	genome.wustl.edu	37	10	37422889	37422889	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052997.2	+1	validated	p.V165	0.032	255	0%	385	32.2%	0	-	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
ZNF248	57209	genome.wustl.edu	37	10	38126968	38126968	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021045.1	-1	provisional	p.Q29H	1.000	192	0%	227	34.4%	7	14.2%	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF25	219749	genome.wustl.edu	37	10	38241544	38241544	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145011.2	-1	provisional	p.F294	0.001	157	0%	160	22.5%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF33A	7581	genome.wustl.edu	37	10	38344580	38344580	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006954.1	+1	validated	p.S510P	0.000	180	0%	140	28.6%	6	66.6%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF37A	7587	genome.wustl.edu	37	10	38407070	38407070	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007094.2	+1	validated	p.E331*	0.003	85	0%	124	31.5%	4	100%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CCNYL2	414194	genome.wustl.edu	37	10	42916341	42916341	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000426433	-1	known	p.D228N	1.000	29	0%	30	36.7%	0	-	probably_damaging(0.979)	deleterious(0.04)	deleterious(0.771)	HMMSmart_CYCLIN,HMMPfam_Cyclin_N,superfamily_Cyclin_like
ZNF33B	7582	genome.wustl.edu	37	10	43089831	43089831	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006955.1	-1	provisional	p.E189D	1.000	144	0%	162	24.7%	4	25%	possibly_damaging(0.946)	tolerated(0.3)	neutral(0.419)	NULL
RET	5979	genome.wustl.edu	37	10	43609111	43609111	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020975.4	+1	reviewed	p.E623K	0.959	52	0%	67	38.8%	0	-	possibly_damaging(0.912)	tolerated(0.13)	deleterious(0.616)	NULL
CSGALNACT2	55454	genome.wustl.edu	37	10	43655995	43655995	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018590.3	+1	provisional	p.G311A	1.000	246	0%	315	28.3%	5	20%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_CHGN,superfamily_Nucleotide-diphospho-sugar transferases
FXYD4	53828	genome.wustl.edu	37	10	43870072	43870072	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173160.2	+1	reviewed	p.D28N	0.108	231	0.4%	542	34.3%	1	0%	benign(0)	deleterious(0.05)	neutral(0.345)	HMMPfam_ATP1G1_PLM_MAT8,PatternScan_FXYD
FXYD4	53828	genome.wustl.edu	37	10	43870970	43870970	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173160.2	+1	reviewed	p.G41R	0.930	96	0%	150	34.7%	1	0%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	HMMPfam_ATP1G1_PLM_MAT8,PatternScan_FXYD
HNRNPF	3185	genome.wustl.edu	37	10	43882423	43882423	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098204.1	-1	reviewed	p.D304N	1.000	60	0%	129	33.3%	166	44.5%	benign(0.347)	deleterious(0)	deleterious(0.554)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
ZNF239	8187	genome.wustl.edu	37	10	44052357	44052357	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099282.1	-1	validated	p.R391C	0.937	134	0%	178	39.3%	2	50%	probably_damaging(1)	tolerated(0.2)	deleterious(0.549)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF239	8187	genome.wustl.edu	37	10	44052635	44052635	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099282.1	-1	validated	p.K298T	1.000	227	0%	257	31.5%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF485	220992	genome.wustl.edu	37	10	44111940	44111940	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145312.3	+1	validated	p.R150I	1.000	152	0%	324	36.1%	0	-	probably_damaging(0.958)	tolerated(0.05)	deleterious(0.747)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
CXCL12	6387	genome.wustl.edu	37	10	44871444	44871444	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033886.2	-1	reviewed	p.K101N	1.000	735	0%	800	29.7%	1	0%	unknown(0)	tolerated(0.14)	-	NULL
TMEM72	643236	genome.wustl.edu	37	10	45430156	45430156	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001123376.1	+1	provisional	p.K134N	1.000	58	0%	51	49%	0	-	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	NULL
ZFAND4	93550	genome.wustl.edu	37	10	46121718	46121718	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128324.1	-1	validated	p.S518Y	0.250	65	0%	99	31.3%	1	0%	benign(0)	deleterious(0.03)	neutral(0.364)	NULL
ZFAND4	93550	genome.wustl.edu	37	10	46159006	46159006	+	Missense_Mutation	SNP	T	T	G	rs72798235	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128324.1	-1	validated	p.K56N	1.000	95	0%	147	23.1%	1	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_ubiquitin,HMMSmart_SM00213,superfamily_Ubiquitin-like
ZFAND4	93550	genome.wustl.edu	37	10	46159140	46159140	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128324.1	-1	validated	p.D12Y	1.000	141	0%	242	31%	2	50%	possibly_damaging(0.91)	deleterious(0)	deleterious(0.807)	NULL
FAM21C	253725	genome.wustl.edu	37	10	46274454	46274454	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015262.2	+1	validated	p.F781L	1.000	409	0%	667	19%	13	38.4%	benign(0.119)	tolerated(0.2)	neutral(0.059)	NULL
SYT15	83849	genome.wustl.edu	37	10	46959992	46959992	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181519.2	-1	reviewed	p.L384M	0.001	185	0%	312	13.8%	1	0%	probably_damaging(0.977)	deleterious(0.01)	deleterious(0.825)	NULL
SYT15	83849	genome.wustl.edu	37	10	46962024	46962024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031912.3	-1	reviewed	p.K404N	1.000	85	0%	90	17.8%	1	0%	benign(0.156)	tolerated(0.62)	neutral(0.018)	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
PPYR1	5540	genome.wustl.edu	37	10	47087146	47087146	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005972.4	+1	validated	p.Q121	1.000	285	0%	354	16.4%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
PPYR1	5540	genome.wustl.edu	37	10	47087511	47087511	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005972.4	+1	validated	p.R243M	0.988	104	0%	106	19.8%	0	-	possibly_damaging(0.713)	deleterious(0)	deleterious(0.702)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ASAH2C	653365	genome.wustl.edu	37	10	48004048	48004048	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000426610	-1	known	p.Q533H	0.071	440	0%	195	30.8%	0	-	benign(0)	deleterious(0.01)	neutral(0.406)	HMMPfam_Ceramidase_alk
RBP3	5949	genome.wustl.edu	37	10	48383866	48383866	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002900.2	-1	reviewed	p.L1122	0.995	127	0.8%	223	28.7%	0	-	-	-	-	HMMPfam_Peptidase_S41,HMMSmart_SM00245,superfamily_ClpP/crotonase
GDF2	2658	genome.wustl.edu	37	10	48416477	48416477	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016204.1	-1	reviewed	p.S73G	1.000	92	0%	62	32.3%	0	-	probably_damaging(0.997)	tolerated(0.09)	deleterious(0.762)	HMMPfam_TGFb_propeptide
FRMPD2	143162	genome.wustl.edu	37	10	49430418	49430418	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001018071.3	-1	reviewed	p.E465*	1.000	148	0%	147	37.4%	0	-	-	-	-	HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295
MAPK8	5599	genome.wustl.edu	37	10	49618104	49618104	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139047.1	+1	reviewed	p.L115I	1.000	183	0%	143	28%	11	36.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_MAPK,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
WDFY4	57705	genome.wustl.edu	37	10	49935703	49935703	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020945.1	+1	validated	p.R324W	0.822	174	0%	215	31.2%	0	-	benign(0.148)	deleterious(0)	neutral(0.458)	NULL
WDFY4	57705	genome.wustl.edu	37	10	49939396	49939396	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020945.1	+1	validated	p.F457	0.169	121	0%	146	38.4%	1	0%	-	-	-	superfamily_ARM repeat
WDFY4	57705	genome.wustl.edu	37	10	49942017	49942017	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020945.1	+1	validated	p.E542*	0.887	261	0%	396	36.6%	0	-	-	-	-	superfamily_ARM repeat
WDFY4	57705	genome.wustl.edu	37	10	49982685	49982685	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000312002	+1	known	p.R3C	0.993	57	0%	64	39.1%	0	-	-	-	-	NULL
LRRC18	474354	genome.wustl.edu	37	10	50121853	50121853	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006939.3	-1	validated	p.E116D	0.991	163	0%	279	22.2%	0	-	probably_damaging(0.991)	tolerated(0.48)	neutral(0.455)	HMMPfam_LRR_1,superfamily_Outer arm dynein light chain 1
WDFY4	57705	genome.wustl.edu	37	10	50167812	50167812	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020945.1	+1	validated	p.P2726H	1.000	94	0%	119	37%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Beach,superfamily_BEACH domain,superfamily_WD40 repeat-like
VSTM4	196740	genome.wustl.edu	37	10	50256599	50256599	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031746.3	-1	validated	p.S233R	1.000	99	0%	95	32.6%	3	0%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
VSTM4	196740	genome.wustl.edu	37	10	50311791	50311791	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144984.2	-1	validated	p.S191F	0.001	143	0%	245	34.7%	0	-	unknown(0)	-	-	NULL
C10orf128	170371	genome.wustl.edu	37	10	50374982	50374982	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010863.1	-1	provisional	p.C57Y	0.996	77	0%	85	10.6%	4	0%	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
C10orf71	118461	genome.wustl.edu	37	10	50532675	50532675	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135196.1	+1	validated	p.Q695H	0.344	39	0%	75	48%	0	-	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	NULL
PGBD3	267004	genome.wustl.edu	37	10	50725153	50725153	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170753.2	-1	validated	p.R3Q	0.995	112	0%	121	29.8%	2	50%	benign(0.008)	deleterious(0)	neutral(0.445)	NULL
CHAT	1103	genome.wustl.edu	37	10	50857676	50857676	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020549.4	+1	reviewed	p.L502R	1.000	21	0%	20	30%	0	-	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases
OGDHL	55753	genome.wustl.edu	37	10	50952736	50952736	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018245.2	-1	validated	p.K564N	1.000	125	0%	157	27.4%	5	60%	possibly_damaging(0.671)	deleterious(0.03)	deleterious(0.603)	HMMPfam_E1_dh,superfamily_SSF52518
NCOA4	8031	genome.wustl.edu	37	10	51585325	51585325	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145260.1	+1	reviewed	p.K491T	0.345	73	0%	97	32%	36	52.7%	possibly_damaging(0.767)	deleterious(0.01)	deleterious(0.690)	NULL
FAM21A	387680	genome.wustl.edu	37	10	51857470	51857470	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005751.1	+1	validated	p.E486K	0.645	205	0%	363	21.5%	11	54.5%	possibly_damaging(0.467)	tolerated(0.06)	deleterious(0.476)	NULL
SGMS1	259230	genome.wustl.edu	37	10	52087030	52087030	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_147156.3	-1	reviewed	p.R226W	1.000	104	0%	137	21.9%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
A1CF	29974	genome.wustl.edu	37	10	52570847	52570847	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138932.1	-1	reviewed	p.F479L	1.000	237	0%	222	32%	0	-	probably_damaging(0.987)	tolerated(0.4)	neutral(0.453)	superfamily_dsRNA-binding domain-like
A1CF	29974	genome.wustl.edu	37	10	52587963	52587963	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138932.1	-1	reviewed	p.L233I	0.931	350	0%	242	36.8%	0	-	probably_damaging(0.998)	tolerated(0.08)	deleterious(0.774)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
PRKG1	5592	genome.wustl.edu	37	10	54040566	54040566	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006258.2	+1	validated	p.S474Y	1.000	183	0%	124	41.1%	0	-	benign(0.001)	tolerated(0.19)	neutral(0.050)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PCDH15	65217	genome.wustl.edu	37	10	55566583	55566583	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142771.1	-1	reviewed	p.S1602Y	1.000	268	0%	185	33%	0	-	benign(0.345)	deleterious(0)	deleterious(0.553)	NULL
PCDH15	65217	genome.wustl.edu	37	10	55566674	55566674	+	Nonsense_Mutation	SNP	G	G	A	rs185389206	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142771.1	-1	reviewed	p.R1572*	0.003	137	0%	105	32.4%	0	-	-	-	-	NULL
PCDH15	65217	genome.wustl.edu	37	10	55568519	55568519	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142769.1	-1	reviewed	p.R1769I	0.000	331	0%	370	32.4%	0	-	unknown(0)	deleterious(0)	-	NULL
PCDH15	65217	genome.wustl.edu	37	10	55568704	55568704	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142769.1	-1	reviewed	p.G1707	0.058	293	0.3%	359	32.9%	0	-	-	-	-	NULL
PCDH15	65217	genome.wustl.edu	37	10	55569072	55569072	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142769.1	-1	reviewed	p.D1585Y	1.000	389	0%	410	30.5%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
PCDH15	65217	genome.wustl.edu	37	10	55583062	55583062	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142763.1	-1	reviewed	p.D1482G	1.000	232	0%	235	28.5%	0	-	possibly_damaging(0.888)	deleterious(0)	deleterious(0.792)	NULL
PCDH15	65217	genome.wustl.edu	37	10	55583063	55583063	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142763.1	-1	reviewed	p.D1482Y	1.000	235	0%	236	28.8%	0	-	benign(0.048)	deleterious(0)	neutral(0.448)	NULL
PCDH15	65217	genome.wustl.edu	37	10	55721588	55721588	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142763.1	-1	reviewed	p.I983S	1.000	235	0%	200	27.5%	0	-	probably_damaging(0.999)	tolerated(0.22)	deleterious(0.532)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
PCDH15	65217	genome.wustl.edu	37	10	56138633	56138633	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142763.1	-1	reviewed	p.S81Y	0.998	160	0%	102	28.4%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMSmart_SM00112
IPMK	253430	genome.wustl.edu	37	10	59955857	59955857	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152230.3	-1	provisional	p.R411*	0.973	74	0%	96	35.4%	2	0%	-	-	-	HMMPfam_IPK,superfamily_SSF56104
BICC1	80114	genome.wustl.edu	37	10	60548181	60548181	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080512.1	+1	reviewed	p.R200W	1.000	249	0%	151	31.1%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00322,superfamily_Eukaryotic type KH-domain (KH-domain type I)
PHYHIPL	84457	genome.wustl.edu	37	10	61005349	61005349	+	Nonstop_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032439.3	+1	validated	p.*377E	1.000	51	0%	43	25.6%	0	-	-	-	-	NULL
SLC16A9	220963	genome.wustl.edu	37	10	61414117	61414117	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194298.2	-1	validated	p.E223*	0.599	163	0%	269	32%	0	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
ANK3	288	genome.wustl.edu	37	10	61830008	61830008	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020987.2	-1	reviewed	p.P3544L	1.000	203	0%	246	36.2%	0	-	probably_damaging(0.995)	-	-	NULL
ANK3	288	genome.wustl.edu	37	10	61832027	61832027	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020987.2	-1	reviewed	p.S2871L	0.997	121	0%	93	23.7%	0	-	benign(0.195)	-	-	NULL
ANK3	288	genome.wustl.edu	37	10	61832438	61832438	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020987.2	-1	reviewed	p.S2734Y	0.542	260	0%	274	36.5%	1	0%	benign(0.191)	-	-	NULL
ANK3	288	genome.wustl.edu	37	10	61833503	61833503	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020987.2	-1	reviewed	p.K2379R	1.000	166	0%	147	27.9%	0	-	benign(0.039)	-	-	NULL
ANK3	288	genome.wustl.edu	37	10	61835920	61835920	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020987.2	-1	reviewed	p.S1573	0.893	149	0%	173	35.3%	0	-	-	-	-	NULL
ANK3	288	genome.wustl.edu	37	10	61847924	61847924	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020987.2	-1	reviewed	p.R1174I	1.000	73	0%	175	30.3%	3	33.3%	possibly_damaging(0.92)	deleterious(0)	deleterious(0.816)	NULL
RHOBTB1	9886	genome.wustl.edu	37	10	62631393	62631393	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014836.4	-1	reviewed	p.F646	1.000	216	0%	289	31.5%	3	33.3%	-	-	-	NULL
JMJD1C	221037	genome.wustl.edu	37	10	64967315	64967315	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032776.1	-1	validated	p.F1372V	0.270	148	0%	191	20.9%	5	20%	benign(0.001)	tolerated(0.65)	neutral(0.003)	NULL
JMJD1C	221037	genome.wustl.edu	37	10	64973781	64973781	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032776.1	-1	validated	p.D716N	1.000	160	0%	318	32.4%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CTNNA3	29119	genome.wustl.edu	37	10	68535266	68535266	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127384.1	-1	validated	p.R355M	1.000	258	0%	237	33.8%	0	-	probably_damaging(0.991)	deleterious(0.03)	deleterious(0.808)	HMMPfam_Vinculin
LRRTM3	347731	genome.wustl.edu	37	10	68687212	68687212	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178011.3	+1	validated	p.C180R	1.000	123	0%	145	33.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like
SIRT1	23411	genome.wustl.edu	37	10	69672272	69672272	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142498.1	+1	reviewed	p.E172*	1.000	177	0%	282	29.8%	6	33.3%	-	-	-	superfamily_DHS-like NAD/FAD-binding domain
HERC4	26091	genome.wustl.edu	37	10	69699350	69699350	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022079.2	-1	validated	p.F864V	1.000	239	0%	403	28.5%	18	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
MYPN	84665	genome.wustl.edu	37	10	69881563	69881563	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032578.2	+1	validated	p.R123Q	0.000	49	0%	71	26.8%	0	-	benign(0.003)	tolerated(0.24)	neutral(0.037)	NULL
MYPN	84665	genome.wustl.edu	37	10	69881906	69881906	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032578.2	+1	validated	p.E237D	0.004	73	0%	84	23.8%	0	-	possibly_damaging(0.856)	tolerated(0.05)	deleterious(0.676)	NULL
MYPN	84665	genome.wustl.edu	37	10	69948679	69948679	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032578.2	+1	validated	p.S907	1.000	157	0%	175	32.6%	0	-	-	-	-	NULL
MYPN	84665	genome.wustl.edu	37	10	69954217	69954217	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032578.2	+1	validated	p.S1008Y	0.988	92	0%	110	31.8%	0	-	possibly_damaging(0.684)	deleterious(0.03)	deleterious(0.609)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
MYPN	84665	genome.wustl.edu	37	10	69959199	69959199	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032578.2	+1	validated	p.K1120	1.000	117	0%	127	34.6%	0	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
DNA2	1763	genome.wustl.edu	37	10	70202856	70202856	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080449.1	-1	provisional	p.Q497H	0.961	123	0%	247	27.9%	3	66.6%	possibly_damaging(0.91)	deleterious(0.05)	deleterious(0.708)	NULL
TET1	80312	genome.wustl.edu	37	10	70332415	70332415	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030625.2	+1	validated	p.R107Q	0.995	46	0%	103	29.1%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
TET1	80312	genome.wustl.edu	37	10	70332625	70332625	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030625.2	+1	validated	p.N177T	0.001	28	0%	99	30.3%	0	-	possibly_damaging(0.85)	deleterious(0)	deleterious(0.772)	NULL
TET1	80312	genome.wustl.edu	37	10	70411688	70411688	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030625.2	+1	validated	p.E1454D	1.000	143	0%	332	33.1%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
CCAR1	55749	genome.wustl.edu	37	10	70496737	70496737	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018237.2	+1	validated	p.N60H	1.000	60	0%	81	28.4%	8	62.5%	unknown(0)	deleterious(0.01)	-	NULL
CCAR1	55749	genome.wustl.edu	37	10	70520794	70520794	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018237.2	+1	validated	p.R651*	1.000	44	0%	149	26.8%	18	16.6%	-	-	-	HMMPfam_SAP,HMMSmart_SM00513,superfamily_SAP domain
STOX1	219736	genome.wustl.edu	37	10	70641774	70641774	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130161.2	+1	reviewed	p.E124G	1.000	256	0%	442	29.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Stork_head
KIAA1279	26128	genome.wustl.edu	37	10	70775592	70775592	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015634.3	+1	reviewed	p.L429P	1.000	122	0%	248	37.1%	40	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
KIAA1279	26128	genome.wustl.edu	37	10	70776036	70776036	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015634.3	+1	reviewed	p.K577T	0.929	89	0%	250	34.8%	48	54.1%	benign(0.002)	tolerated(0.24)	neutral(0.037)	NULL
HKDC1	80201	genome.wustl.edu	37	10	71003077	71003077	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025130.3	+1	validated	p.F277	1.000	92	0%	104	73.1%	3	100%	-	-	-	HMMPfam_Hexokinase_2,superfamily_Actin-like ATPase domain
HKDC1	80201	genome.wustl.edu	37	10	71018651	71018651	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025130.3	+1	validated	p.D718Y	1.000	134	0%	302	32.5%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Hexokinase_2,superfamily_Actin-like ATPase domain
HKDC1	80201	genome.wustl.edu	37	10	71026507	71026507	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025130.3	+1	validated	p.E916D	0.089	72	0%	175	38.3%	1	0%	benign(0)	tolerated(0.4)	neutral(0.016)	NULL
TACR2	6865	genome.wustl.edu	37	10	71175861	71175861	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001057.2	-1	validated	p.V73	0.998	112	0%	268	29.1%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
TSPAN15	23555	genome.wustl.edu	37	10	71255378	71255378	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012339.3	+1	reviewed	p.R129Q	1.000	231	0%	387	31.3%	25	68%	possibly_damaging(0.941)	tolerated(0.17)	neutral(0.446)	superfamily_Tetraspanin,HMMPfam_Tetraspannin
TSPAN15	23555	genome.wustl.edu	37	10	71266629	71266629	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012339.3	+1	reviewed	p.E260D	1.000	21	0%	32	43.8%	39	61.5%	possibly_damaging(0.916)	tolerated(0.18)	neutral(0.423)	NULL
C10orf35	219738	genome.wustl.edu	37	10	71391596	71391596	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145306.2	+1	validated	e1+1	1.000	109	0%	144	31.2%	3	100%	-	-	-	-
SAR1A	56681	genome.wustl.edu	37	10	71913631	71913631	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142648.1	-1	validated	p.R148H	1.000	327	0%	484	32.6%	187	44.3%	benign(0.065)	deleterious(0)	neutral(0.449)	HMMSmart_SM00178,HMMSmart_SM00177,HMMPfam_Arf,superfamily_P-loop containing nucleoside triphosphate hydrolases
C10orf27	219793	genome.wustl.edu	37	10	72532313	72532313	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152710.2	-1	validated	p.P309	0.001	399	0%	497	36.2%	0	-	-	-	-	NULL
CDH23	64072	genome.wustl.edu	37	10	73447440	73447440	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022124.5	+1	reviewed	p.A675T	0.992	84	0%	116	27.6%	0	-	benign(0.024)	tolerated(0.42)	neutral(0.015)	superfamily_Cadherin-like
CDH23	64072	genome.wustl.edu	37	10	73468897	73468897	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022124.5	+1	reviewed	p.A1050V	0.994	88	0%	156	31.4%	0	-	possibly_damaging(0.731)	deleterious(0.02)	deleterious(0.650)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
CDH23	64072	genome.wustl.edu	37	10	73501684	73501684	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000398792	+1	known	p.S437	0.023	17	0%	24	50%	0	-	-	-	-	HMMSmart_SM00112,superfamily_Cadherin-like
PSAP	5660	genome.wustl.edu	37	10	73585487	73585487	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000357471	-1	known	e8-1	0.000	47	0%	61	21.3%	3	33.3%	-	-	-	-
PSAP	5660	genome.wustl.edu	37	10	73590888	73590888	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042465.1	-1	reviewed	p.E124*	0.997	166	0%	291	34%	421	0.7%	-	-	-	HMMPfam_SapB_2,HMMSmart_SapB,superfamily_Saposin_like
ANAPC16	119504	genome.wustl.edu	37	10	73990146	73990146	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173473.2	+1	validated	p.C55	0.997	249	0.4%	495	33.9%	76	39.4%	-	-	-	NULL
MICU1	10367	genome.wustl.edu	37	10	74127971	74127971	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006077.2	-1	validated	p.F473	0.914	140	0%	260	35.4%	61	39.3%	-	-	-	NULL
P4HA1	5033	genome.wustl.edu	37	10	74790078	74790078	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000917.3	-1	reviewed	p.R400I	1.000	218	0%	278	24.8%	108	34.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00702
TTC18	118491	genome.wustl.edu	37	10	75037110	75037110	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145170.3	-1	validated	p.K873T	0.999	106	0%	207	31.9%	2	100%	probably_damaging(0.965)	deleterious(0.03)	deleterious(0.771)	superfamily_TPR-like
TTC18	118491	genome.wustl.edu	37	10	75095277	75095277	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145170.3	-1	validated	p.S266	0.662	172	0%	253	32.8%	2	50%	-	-	-	NULL
ANXA7	310	genome.wustl.edu	37	10	75148091	75148091	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004034.2	-1	reviewed	p.R195C	1.000	170	0%	280	27.5%	67	40.2%	probably_damaging(0.973)	deleterious(0.03)	deleterious(0.779)	superfamily_Annexin,HMMPfam_Annexin
MSS51	118490	genome.wustl.edu	37	10	75187482	75187482	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024593.1	-1	validated	p.R89Q	0.059	73	0%	116	33.6%	0	-	probably_damaging(0.968)	deleterious(0.02)	deleterious(0.793)	NULL
SYNPO2L	79933	genome.wustl.edu	37	10	75413284	75413284	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114133.1	-1	validated	p.R129C	0.326	45	0%	71	38%	0	-	possibly_damaging(0.652)	tolerated(0.06)	deleterious(0.551)	NULL
SEC24C	9632	genome.wustl.edu	37	10	75519546	75519546	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004922.2	+1	reviewed	p.G159S	1.000	45	0%	91	42.9%	39	33.3%	probably_damaging(0.995)	tolerated(0.74)	neutral(0.459)	NULL
SEC24C	9632	genome.wustl.edu	37	10	75526137	75526137	+	Missense_Mutation	SNP	G	G	A	rs144210286	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004922.2	+1	reviewed	p.R546H	1.000	76	0%	176	34.7%	50	42%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_Sec23_trunk,superfamily_vWA-like,superfamily_beta-sandwich domain of Sec23/24
KIAA0913	23053	genome.wustl.edu	37	10	75550762	75550762	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015037.2	+1	validated	p.T324M	1.000	29	0%	44	36.4%	20	40%	probably_damaging(0.989)	deleterious(0.02)	deleterious(0.823)	NULL
PLAU	5328	genome.wustl.edu	37	10	75675091	75675091	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002658.3	+1	reviewed	p.Y351	0.998	102	1%	143	37.8%	34	17.6%	-	-	-	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
VCL	7414	genome.wustl.edu	37	10	75849004	75849004	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014000.2	+1	reviewed	p.Q358R	1.000	71	0%	152	33.6%	30	20%	possibly_damaging(0.93)	deleterious(0.03)	deleterious(0.741)	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin
ADK	132	genome.wustl.edu	37	10	76429959	76429959	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006721.2	+1	reviewed	p.F299C	1.000	200	0%	263	39.2%	44	50%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_PfkB,superfamily_Ribokinase-like
VDAC2	7417	genome.wustl.edu	37	10	76982023	76982023	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003375.3	+1	reviewed	p.E200*	1.000	96	0%	245	33.5%	108	8.3%	-	-	-	HMMPfam_Porin_3
VDAC2	7417	genome.wustl.edu	37	10	76990727	76990727	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003375.3	+1	reviewed	p.A289T	1.000	104	0%	242	35.5%	255	80.7%	benign(0.011)	deleterious(0)	neutral(0.445)	NULL
DLG5	9231	genome.wustl.edu	37	10	79576814	79576814	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004747.3	-1	reviewed	p.K1275N	1.000	264	0%	464	29.7%	26	26.9%	probably_damaging(0.99)	deleterious(0.02)	deleterious(0.825)	NULL
POLR3A	11128	genome.wustl.edu	37	10	79769648	79769648	+	Missense_Mutation	SNP	G	G	A	rs187245012	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007055.3	-1	validated	p.R582C	1.000	105	0%	184	42.4%	9	77.7%	possibly_damaging(0.812)	deleterious(0)	deleterious(0.750)	HMMPfam_RNA_pol_Rpb1_3,superfamily_SSF64484
ZMIZ1	57178	genome.wustl.edu	37	10	80961430	80961430	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020338.3	+1	validated	p.R14Q	1.000	64	0%	107	36.4%	16	43.7%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
ZMIZ1	57178	genome.wustl.edu	37	10	81053330	81053330	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020338.3	+1	validated	p.R384W	1.000	13	0%	18	27.8%	4	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
ZMIZ1	57178	genome.wustl.edu	37	10	81058873	81058873	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020338.3	+1	validated	p.R578H	1.000	47	0%	58	34.5%	9	22.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FAM22B	729262	genome.wustl.edu	37	10	81466194	81466194	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000429828	+1	known	p.A260V	0.004	125	0%	69	15.9%	0	-	benign(0.056)	deleterious(0)	neutral(0.448)	NULL
MAT1A	4143	genome.wustl.edu	37	10	82036143	82036143	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000429.2	-1	reviewed	p.G253*	0.999	62	0%	64	29.7%	0	-	-	-	-	HMMPfam_S-AdoMet_synt_C,superfamily_S-AdoMet_synt
TSPAN14	81619	genome.wustl.edu	37	10	82269159	82269159	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030927.2	+1	validated	p.E128K	0.996	123	0%	132	34.8%	74	33.7%	benign(0.001)	tolerated(0.62)	neutral(0.004)	superfamily_Tetraspanin,HMMPfam_Tetraspannin
NRG3	10718	genome.wustl.edu	37	10	83635919	83635919	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010848.3	+1	reviewed	p.H275Y	1.000	27	0%	48	33.3%	0	-	benign(0)	tolerated(0.77)	neutral(0.001)	NULL
NRG3	10718	genome.wustl.edu	37	10	83926497	83926497	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000404576	+1	known	p.I25	0.000	313	0%	254	39.4%	0	-	-	-	-	NULL
WAPAL	23063	genome.wustl.edu	37	10	88220178	88220178	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015045.2	-1	validated	p.R853I	1.000	336	0%	551	32.8%	19	26.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_WAPL,superfamily_ARM repeat
WAPAL	23063	genome.wustl.edu	37	10	88231998	88231998	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015045.2	-1	validated	p.K666T	1.000	163	0%	206	25.2%	9	11.1%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	HMMPfam_WAPL,superfamily_ARM repeat
WAPAL	23063	genome.wustl.edu	37	10	88260201	88260201	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015045.2	-1	validated	p.D267N	0.992	111	0%	156	21.2%	6	0%	benign(0.277)	tolerated(0.19)	neutral(0.079)	NULL
WAPAL	23063	genome.wustl.edu	37	10	88277847	88277847	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000342368	-1	known	p.E79*	1.000	81	0%	122	41%	1	0%	-	-	-	NULL
MMRN2	79812	genome.wustl.edu	37	10	88702116	88702116	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024756.2	-1	validated	p.G809W	0.002	77	0%	129	38%	11	0%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
MINPP1	9562	genome.wustl.edu	37	10	89268226	89268226	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004897.4	+1	validated	p.E257D	1.000	55	0%	73	37%	3	0%	possibly_damaging(0.541)	tolerated(0.21)	neutral(0.227)	HMMPfam_Acid_phosphat_A,superfamily_Phosphoglycerate mutase-like
PTEN	5728	genome.wustl.edu	37	10	89624245	89624245	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000371953	+1	known	p.E7*	1.000	287	0%	373	35.7%	25	60%	-	-	-	NULL
PTEN	5728	genome.wustl.edu	37	10	89653842	89653842	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000371953	+1	known	p.R47M	1.000	215	0%	238	31.5%	17	29.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
PTEN	5728	genome.wustl.edu	37	10	89692898	89692898	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000371953	+1	known	p.K128Q	1.000	208	0%	295	26.1%	31	41.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DSPc,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II
RNLS	55328	genome.wustl.edu	37	10	90034736	90034736	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018363.3	-1	validated	p.A310	0.000	140	0%	164	29.9%	1	0%	-	-	-	NULL
LIPJ	142910	genome.wustl.edu	37	10	90356597	90356597	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010939.2	+1	validated	p.F209	0.000	152	0%	43	39.5%	0	-	-	-	-	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases
LIPF	8513	genome.wustl.edu	37	10	90438297	90438297	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004190.2	+1	reviewed	p.G352	0.000	227	0%	202	28.2%	0	-	-	-	-	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases
FAS	355	genome.wustl.edu	37	10	90774000	90774000	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000043.3	+1	reviewed	p.V267	0.000	114	0%	173	32.4%	10	20%	-	-	-	HMMPfam_Death,HMMSmart_SM00005,superfamily_DEATH domain
LIPA	3988	genome.wustl.edu	37	10	90983454	90983454	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000235.2	-1	reviewed	p.R270I	0.963	108	0%	81	34.6%	22	9%	unknown(0)	-	-	HMMPfam_Abhydrolase_1,superfamily_alpha/beta-Hydrolases
IFIT3	3437	genome.wustl.edu	37	10	91099122	91099122	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031683.2	+1	validated	p.S237Y	0.135	88	0%	111	33.3%	3	0%	benign(0.021)	tolerated(0.05)	neutral(0.346)	superfamily_TPR-like
IFIT3	3437	genome.wustl.edu	37	10	91099366	91099366	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031683.2	+1	validated	p.S318	0.000	42	0%	82	36.6%	5	0%	-	-	-	superfamily_TPR-like
SLC16A12	387700	genome.wustl.edu	37	10	91203556	91203556	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_213606.3	-1	validated	p.T57	0.999	155	0%	179	36.9%	4	75%	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
PANK1	53354	genome.wustl.edu	37	10	91371496	91371496	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148977.1	-1	reviewed	p.A338V	1.000	122	0%	137	33.6%	6	50%	probably_damaging(0.996)	tolerated(0.05)	deleterious(0.807)	HMMPfam_Fumble,superfamily_Actin-like ATPase domain
KIF20B	9585	genome.wustl.edu	37	10	91486188	91486188	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016195.2	+1	validated	p.E674*	1.000	72	0%	107	33.6%	0	-	-	-	-	NULL
KIF20B	9585	genome.wustl.edu	37	10	91497569	91497569	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016195.2	+1	validated	p.E951K	0.999	48	0%	57	28.1%	1	0%	possibly_damaging(0.892)	deleterious(0.01)	deleterious(0.757)	NULL
HTR7	3363	genome.wustl.edu	37	10	92509291	92509291	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019859.3	-1	reviewed	p.A200	0.882	79	0%	132	31.8%	1	0%	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
PCGF5	84333	genome.wustl.edu	37	10	93038067	93038067	+	Missense_Mutation	SNP	C	C	A	rs191746944	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032373.3	+1	provisional	p.F255L	0.653	216	0%	224	27.7%	5	20%	possibly_damaging(0.942)	tolerated(0.98)	neutral(0.387)	NULL
HECTD2	143279	genome.wustl.edu	37	10	93221942	93221942	+	Splice_Site	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182765.3	+1	validated	e5+1	1.000	185	0%	193	37.8%	2	100%	-	-	-	-
HECTD2	143279	genome.wustl.edu	37	10	93242759	93242759	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182765.3	+1	validated	p.I249	1.000	110	0%	87	19.5%	0	-	-	-	-	NULL
PPP1R3C	5507	genome.wustl.edu	37	10	93389874	93389874	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005398.4	-1	provisional	p.R255I	0.996	138	0%	132	32.6%	0	-	benign(0.027)	deleterious(0.03)	neutral(0.366)	HMMPfam_CBM_21
TNKS2	80351	genome.wustl.edu	37	10	93601083	93601083	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025235.3	+1	validated	p.E573*	1.000	250	0%	335	29.9%	7	14.2%	-	-	-	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
BTAF1	9044	genome.wustl.edu	37	10	93713510	93713510	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003972.2	+1	validated	p.E194A	1.000	177	0%	180	33.3%	2	50%	benign(0.02)	tolerated(0.66)	neutral(0.004)	superfamily_ARM repeat
BTAF1	9044	genome.wustl.edu	37	10	93749099	93749099	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003972.2	+1	validated	p.E872D	0.990	92	0%	110	31.8%	4	75%	benign(0)	tolerated(0.75)	neutral(0.002)	superfamily_ARM repeat
BTAF1	9044	genome.wustl.edu	37	10	93770902	93770902	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003972.2	+1	validated	p.F1392L	0.998	81	0%	99	21.2%	2	50%	benign(0.002)	tolerated(0.41)	neutral(0.015)	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
HHEX	3087	genome.wustl.edu	37	10	94452173	94452173	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002729.4	+1	reviewed	p.R137M	1.000	43	0%	75	24%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00389,superfamily_Homeodomain-like
HHEX	3087	genome.wustl.edu	37	10	94454304	94454304	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002729.4	+1	reviewed	p.E198*	1.000	92	0%	136	26.5%	7	0%	-	-	-	HMMSmart_SM00389
HHEX	3087	genome.wustl.edu	37	10	94454498	94454498	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002729.4	+1	reviewed	p.G262	0.002	101	0%	182	26.9%	2	50%	-	-	-	NULL
CYP26A1	1592	genome.wustl.edu	37	10	94835697	94835697	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000783.3	+1	reviewed	p.R327*	0.949	117	0%	184	33.2%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome_P450
CYP26A1	1592	genome.wustl.edu	37	10	94836454	94836454	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000783.3	+1	reviewed	e6+1	1.000	144	0%	188	24.5%	0	-	-	-	-	-
CYP26A1	1592	genome.wustl.edu	37	10	94836752	94836752	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000783.3	+1	reviewed	p.I395	1.000	83	0%	98	23.5%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome_P450
CYP26A1	1592	genome.wustl.edu	37	10	94836819	94836819	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000783.3	+1	reviewed	p.R418*	1.000	109	0%	146	39.7%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome_P450
MYOF	26509	genome.wustl.edu	37	10	95159233	95159233	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013451.3	-1	reviewed	p.Q379	1.000	119	0%	152	34.2%	4	0%	-	-	-	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
CEP55	55165	genome.wustl.edu	37	10	95276727	95276727	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127182.1	+1	validated	p.D239N	0.574	94	0%	179	34.1%	19	57.8%	benign(0.012)	tolerated(0.12)	neutral(0.261)	NULL
LGI1	9211	genome.wustl.edu	37	10	95517968	95517968	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005097.2	+1	reviewed	p.L23I	1.000	183	0%	229	33.6%	0	-	benign(0.001)	tolerated(0.36)	neutral(0.020)	NULL
LGI1	9211	genome.wustl.edu	37	10	95518525	95518525	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005097.2	+1	reviewed	p.V75A	1.000	188	0%	191	27.7%	0	-	benign(0.079)	tolerated(0.07)	neutral(0.325)	superfamily_L domain-like
LGI1	9211	genome.wustl.edu	37	10	95553033	95553033	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005097.2	+1	reviewed	p.P255H	1.000	236	0%	227	32.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_EPTP
PLCE1	51196	genome.wustl.edu	37	10	96076352	96076352	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016341.3	+1	reviewed	p.L2061V	1.000	102	0%	128	35.9%	7	57.1%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	NULL
PLCE1	51196	genome.wustl.edu	37	10	96081669	96081669	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016341.3	+1	reviewed	p.E2118D	1.000	140	0%	270	37%	15	46.6%	benign(0.01)	tolerated(0.1)	neutral(0.287)	NULL
HELLS	3070	genome.wustl.edu	37	10	96333775	96333775	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018063.3	+1	reviewed	p.S179L	1.000	93	0%	150	45.3%	2	50%	possibly_damaging(0.761)	deleterious(0.03)	deleterious(0.646)	superfamily_P-loop containing nucleoside triphosphate hydrolases
HELLS	3070	genome.wustl.edu	37	10	96356659	96356659	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018063.3	+1	reviewed	p.N764T	0.598	76	0%	51	35.3%	8	75%	benign(0)	tolerated(0.75)	neutral(0.002)	NULL
HELLS	3070	genome.wustl.edu	37	10	96361316	96361316	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018063.3	+1	reviewed	p.E818D	1.000	130	0%	141	23.4%	13	30.7%	benign(0.016)	tolerated(0.43)	neutral(0.014)	NULL
CYP2C9	1559	genome.wustl.edu	37	10	96748691	96748691	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000771.3	+1	reviewed	p.S460Y	0.005	265	0%	217	30.4%	1	0%	benign(0.097)	deleterious(0.01)	neutral(0.413)	HMMPfam_p450,superfamily_Cytochrome P450
CYP2C8	1558	genome.wustl.edu	37	10	96798783	96798783	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000770.3	-1	reviewed	p.M388L	0.129	241	0.4%	246	35.4%	0	-	benign(0)	tolerated(0.46)	neutral(0.012)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP2C8	1558	genome.wustl.edu	37	10	96802834	96802834	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000770.3	-1	reviewed	p.A321D	0.924	237	0%	288	36.5%	2	0%	benign(0.007)	tolerated(0.14)	neutral(0.249)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP2C8	1558	genome.wustl.edu	37	10	96818110	96818110	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000770.3	-1	reviewed	p.F267	1.000	269	0%	239	33.1%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome_P450
C10orf129	142827	genome.wustl.edu	37	10	96988429	96988429	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207321.2	+1	validated	p.R444I	0.957	284	0%	578	33%	0	-	benign(0.023)	tolerated(0.39)	neutral(0.017)	superfamily_Acetyl-CoA synthetase-like
SORBS1	10580	genome.wustl.edu	37	10	97197274	97197274	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034954.1	-1	validated	p.A17T	1.000	307	0%	436	31%	1	0%	benign(0.094)	deleterious(0.01)	neutral(0.413)	NULL
CC2D2B	387707	genome.wustl.edu	37	10	97787034	97787034	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000451649	+1	known	p.R302Q	1.000	302	0%	311	30.2%	0	-	probably_damaging(0.975)	tolerated(0.07)	deleterious(0.736)	NULL
ZNF518A	9849	genome.wustl.edu	37	10	97917720	97917720	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000371192	+1	known	p.E547D	0.043	89	0%	97	39.2%	2	50%	-	-	-	NULL
BLNK	29760	genome.wustl.edu	37	10	97966775	97966775	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013314.3	-1	reviewed	p.V270A	0.627	231	0%	234	27.4%	4	25%	benign(0.21)	tolerated(0.28)	neutral(0.052)	NULL
TLL2	7093	genome.wustl.edu	37	10	98146741	98146741	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012465.3	-1	validated	p.Y607	0.756	88	0%	91	30.8%	0	-	-	-	-	HMMSmart_EGF_CA,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_SSF57196
TLL2	7093	genome.wustl.edu	37	10	98192690	98192690	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012465.3	-1	validated	p.S132R	0.003	145	0%	182	28.6%	0	-	benign(0.011)	tolerated(0.73)	neutral(0.002)	NULL
PIK3AP1	118788	genome.wustl.edu	37	10	98386470	98386470	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152309.2	-1	validated	p.F555C	1.000	120	0%	195	32.3%	0	-	benign(0)	tolerated(0.17)	neutral(0.059)	NULL
PIK3AP1	118788	genome.wustl.edu	37	10	98386618	98386618	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152309.2	-1	validated	p.L506I	0.000	127	0%	180	38.3%	2	0%	benign(0.024)	tolerated(0.49)	neutral(0.011)	NULL
PIK3AP1	118788	genome.wustl.edu	37	10	98416630	98416630	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152309.2	-1	validated	p.S164	0.025	78	0%	109	33%	0	-	-	-	-	NULL
SLIT1	6585	genome.wustl.edu	37	10	98807748	98807748	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003061.2	-1	validated	p.E491*	1.000	112	0%	142	25.4%	0	-	-	-	-	superfamily_L domain-like
SLIT1	6585	genome.wustl.edu	37	10	98808794	98808794	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003061.2	-1	validated	p.T461	0.114	54	0%	51	25.5%	0	-	-	-	-	HMMSmart_SM00082,superfamily_L domain-like
EXOSC1	51013	genome.wustl.edu	37	10	99196982	99196982	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016046.3	-1	validated	p.N149	0.892	82	0%	165	34.5%	105	41.9%	-	-	-	NULL
MMS19	64210	genome.wustl.edu	37	10	99226621	99226621	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000434538	-1	known	p.A20V	0.995	119	0%	190	28.9%	28	35.7%	-	-	-	superfamily_ARM repeat
MORN4	118812	genome.wustl.edu	37	10	99377006	99377006	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098831.1	-1	validated	p.L47	0.945	116	0%	279	32.6%	7	42.8%	-	-	-	HMMPfam_MORN,HMMSmart_SM00698,superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
GOLGA7B	401647	genome.wustl.edu	37	10	99619229	99619229	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010917.1	+1	provisional	p.Q9H	1.000	96	0%	108	33.3%	0	-	probably_damaging(0.982)	deleterious(0.01)	deleterious(0.832)	NULL
CRTAC1	55118	genome.wustl.edu	37	10	99643977	99643977	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018058.4	-1	validated	p.P540T	0.035	102	0%	94	36.2%	0	-	benign(0)	tolerated(0.16)	neutral(0.059)	NULL
C10orf28	27291	genome.wustl.edu	37	10	99969543	99969543	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014472.4	+1	validated	p.E558K	0.118	114	0%	138	30.4%	4	25%	benign(0.139)	tolerated(0.07)	neutral(0.331)	NULL
LOXL4	84171	genome.wustl.edu	37	10	100019157	100019157	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032211.6	-1	reviewed	p.P231L	1.000	150	0%	212	36.3%	0	-	probably_damaging(0.996)	tolerated(0.09)	deleterious(0.758)	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like
HPSE2	60495	genome.wustl.edu	37	10	100401613	100401613	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021828.4	-1	reviewed	p.K363N	1.000	250	0%	284	32.7%	0	-	probably_damaging(0.99)	tolerated(0.25)	deleterious(0.478)	HMMPfam_Glyco_hydro_79n
CNNM1	26507	genome.wustl.edu	37	10	101120664	101120664	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020348.2	+1	validated	p.S597L	0.999	109	0%	139	31.7%	0	-	probably_damaging(0.991)	tolerated(0.17)	deleterious(0.503)	NULL
CUTC	51076	genome.wustl.edu	37	10	101492143	101492143	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015960.2	+1	validated	p.A13V	0.320	21	0%	32	37.5%	8	37.5%	benign(0.013)	deleterious(0)	neutral(0.445)	NULL
CUTC	51076	genome.wustl.edu	37	10	101507134	101507134	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015960.2	+1	validated	p.R187Q	0.997	235	0%	336	34.5%	7	57.1%	benign(0.002)	tolerated(0.3)	neutral(0.029)	HMMPfam_CutC,superfamily_CutC-like (Pfam 03932)
ABCC2	1244	genome.wustl.edu	37	10	101578906	101578906	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000392.3	+1	reviewed	p.L834M	0.264	139	0%	191	31.9%	0	-	benign(0.031)	tolerated(0.38)	neutral(0.019)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCC2	1244	genome.wustl.edu	37	10	101578977	101578977	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000392.3	+1	reviewed	p.K857N	1.000	111	0%	153	34%	0	-	benign(0.11)	deleterious(0.01)	neutral(0.414)	NULL
ABCC2	1244	genome.wustl.edu	37	10	101594172	101594172	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000392.3	+1	reviewed	p.S1098	0.879	265	0%	385	24.7%	0	-	-	-	-	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
CPN1	1369	genome.wustl.edu	37	10	101816879	101816879	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001308.2	-1	reviewed	p.N301S	1.000	47	0%	87	31%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases
CHUK	1147	genome.wustl.edu	37	10	101982694	101982694	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001278.3	-1	reviewed	p.E82K	1.000	168	0%	268	31%	3	66.6%	benign(0.045)	tolerated(0.19)	neutral(0.052)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
BLOC1S2	282991	genome.wustl.edu	37	10	102039907	102039907	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173809.2	-1	validated	p.K124T	1.000	91	0%	145	26.2%	33	36.3%	probably_damaging(0.955)	deleterious(0.03)	deleterious(0.763)	HMMPfam_BLOC1_2
PAX2	5076	genome.wustl.edu	37	10	102541073	102541073	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003988.3	+1	reviewed	p.G189	1.000	293	0%	465	35.1%	0	-	unknown(0)	-	-	NULL
FAM178A	55719	genome.wustl.edu	37	10	102676961	102676961	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136123.1	+1	validated	p.L273	0.993	60	0%	108	35.2%	3	33.3%	-	-	-	NULL
FAM178A	55719	genome.wustl.edu	37	10	102676969	102676969	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136123.1	+1	validated	p.K276T	0.925	55	0%	102	31.4%	2	0%	probably_damaging(0.971)	deleterious(0.01)	deleterious(0.819)	NULL
FAM178A	55719	genome.wustl.edu	37	10	102678181	102678181	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136123.1	+1	validated	p.S319*	1.000	135	0%	119	29.4%	1	100%	-	-	-	NULL
FAM178A	55719	genome.wustl.edu	37	10	102684373	102684373	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136123.1	+1	validated	p.K539*	0.971	71	1.4%	122	32%	1	0%	-	-	-	NULL
SEMA4G	57715	genome.wustl.edu	37	10	102737461	102737461	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017893.2	+1	reviewed	p.A137T	1.000	253	0%	285	33.3%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
C10orf2	56652	genome.wustl.edu	37	10	102749105	102749105	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021830.4	+1	reviewed	p.E380*	1.000	42	0%	73	31.5%	7	28.5%	-	-	-	NULL
SFXN3	81855	genome.wustl.edu	37	10	102795738	102795738	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000436746	+1	known	p.S112I	0.001	121	0%	177	44.1%	0	-	-	-	-	HMMPfam_Mtc
BTRC	8945	genome.wustl.edu	37	10	103296370	103296370	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033637.2	+1	reviewed	p.R513*	1.000	301	0%	635	32.1%	4	0%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
NPM3	10360	genome.wustl.edu	37	10	103542277	103542277	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006993.2	-1	reviewed	p.I94	0.984	216	0%	315	33.7%	120	37.5%	-	-	-	HMMPfam_Nucleoplasmin,superfamily_Nucleoplasmin
MGEA5	10724	genome.wustl.edu	37	10	103551148	103551148	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012215.3	-1	validated	p.L742V	1.000	122	0%	263	37.3%	36	58.3%	benign(0.001)	tolerated(0.54)	neutral(0.007)	superfamily_Acyl-CoA N-acyltransferases (Nat)
HPS6	79803	genome.wustl.edu	37	10	103826015	103826015	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024747.4	+1	reviewed	p.L262	0.686	23	0%	24	33.3%	22	31.8%	-	-	-	NULL
PPRC1	23082	genome.wustl.edu	37	10	103908961	103908961	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015062.3	+1	reviewed	p.R1589H	1.000	116	0%	177	24.9%	59	22%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
ELOVL3	83401	genome.wustl.edu	37	10	103988684	103988684	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152310.1	+1	provisional	p.K163T	0.007	96	0%	175	36%	0	-	benign(0)	tolerated(0.17)	neutral(0.059)	HMMPfam_ELO
GBF1	8729	genome.wustl.edu	37	10	104130495	104130495	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004193.1	+1	provisional	p.R1179*	1.000	252	0%	412	31.8%	33	6%	-	-	-	NULL
NFKB2	4791	genome.wustl.edu	37	10	104161211	104161211	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077494.1	+1	validated	p.K743N	1.000	86	0%	111	36%	71	33.8%	probably_damaging(0.978)	tolerated(0.2)	deleterious(0.469)	NULL
PSD	5662	genome.wustl.edu	37	10	104164802	104164802	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002779.3	-1	provisional	p.K803T	1.000	68	0%	93	36.6%	20	0%	benign(0.004)	tolerated(0.07)	neutral(0.319)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
PSD	5662	genome.wustl.edu	37	10	104173861	104173861	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002779.3	-1	provisional	p.F406	1.000	39	0%	88	36.4%	0	-	-	-	-	NULL
SUFU	51684	genome.wustl.edu	37	10	104356918	104356918	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016169.3	+1	reviewed	p.E260K	1.000	99	0%	140	37.9%	6	66.6%	benign(0.016)	tolerated(0.17)	neutral(0.059)	HMMPfam_SUFU,superfamily_Suppressor of Fused N-terminal domain
AS3MT	57412	genome.wustl.edu	37	10	104650348	104650348	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000369880	+1	known	p.K311N	1.000	101	0%	212	35.8%	3	0%	benign(0.019)	tolerated(0.16)	neutral(0.060)	NULL
CNNM2	54805	genome.wustl.edu	37	10	104678990	104678990	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017649.3	+1	validated	p.F251L	1.000	13	0%	20	25%	8	50%	benign(0.009)	tolerated(0.57)	neutral(0.007)	NULL
CNNM2	54805	genome.wustl.edu	37	10	104679654	104679654	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017649.3	+1	validated	p.I473L	1.000	90	0%	232	31%	10	10%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	HMMPfam_CBS
CNNM2	54805	genome.wustl.edu	37	10	104835948	104835948	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017649.3	+1	validated	p.N780T	1.000	112	0%	180	36.7%	14	21.4%	benign(0.008)	tolerated(0.58)	neutral(0.005)	NULL
NT5C2	22978	genome.wustl.edu	37	10	104849642	104849642	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134373.1	-1	validated	p.E491	0.996	158	0.6%	262	35.1%	47	42.5%	-	-	-	HMMPfam_5_nucleotid
LOC729020	729020	genome.wustl.edu	37	10	105005926	105005926	+	Missense_Mutation	SNP	G	G	T	rs61746133	byFrequency;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143909.1	+1	provisional	p.R58L	0.104	184	0%	412	32.8%	3	0%	-	-	-	HMMPfam_Ribul_P_3_epim,superfamily_RibP_bind_barrel
SLK	9748	genome.wustl.edu	37	10	105762247	105762247	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014720.2	+1	provisional	p.E437D	0.981	114	0%	162	31.5%	3	66.6%	benign(0.139)	tolerated(0.34)	neutral(0.035)	superfamily_Protein kinase-like (PK-like)
COL17A1	1308	genome.wustl.edu	37	10	105803329	105803329	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000494.3	-1	reviewed	p.S815	0.009	54	0%	70	40%	1	100%	-	-	-	NULL
COL17A1	1308	genome.wustl.edu	37	10	105815739	105815739	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000494.3	-1	reviewed	p.K496N	0.023	83	0%	129	36.4%	1	0%	unknown(0)	deleterious(0)	-	NULL
COL17A1	1308	genome.wustl.edu	37	10	105831820	105831820	+	Nonsense_Mutation	SNP	G	G	A	rs121912774		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000494.3	-1	reviewed	p.R145*	1.000	192	0%	253	31.6%	1	0%	-	-	-	NULL
WDR96	80217	genome.wustl.edu	37	10	105920909	105920909	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000434629	-1	known	p.N503S	0.595	310	0%	321	31.5%	0	-	-	-	-	NULL
WDR96	80217	genome.wustl.edu	37	10	105926473	105926473	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025145.5	-1	provisional	p.R938W	0.609	98	0%	124	33.9%	0	-	probably_damaging(0.989)	deleterious(0.01)	deleterious(0.845)	superfamily_WD40 repeat-like
CCDC147	159686	genome.wustl.edu	37	10	106118141	106118141	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008723.1	+1	validated	p.E18*	1.000	91	0%	84	31%	0	-	-	-	-	NULL
CCDC147	159686	genome.wustl.edu	37	10	106153215	106153215	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008723.1	+1	validated	p.K552N	1.000	86	0%	119	28.6%	0	-	benign(0.171)	tolerated(0.05)	neutral(0.361)	NULL
CCDC147	159686	genome.wustl.edu	37	10	106166535	106166535	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008723.1	+1	validated	p.K747T	1.000	136	0%	171	16.4%	1	0%	probably_damaging(0.988)	tolerated(0.14)	deleterious(0.687)	NULL
CCDC147	159686	genome.wustl.edu	37	10	106209949	106209949	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008723.1	+1	validated	p.E833*	1.000	70	0%	100	41%	0	-	-	-	-	NULL
SORCS3	22986	genome.wustl.edu	37	10	106959780	106959780	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014978.1	+1	reviewed	p.R678H	1.000	122	0%	125	35.2%	0	-	possibly_damaging(0.895)	tolerated(0.08)	deleterious(0.653)	HMMSmart_VPS10,superfamily_SSF110296
SORCS3	22986	genome.wustl.edu	37	10	106960988	106960988	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014978.1	+1	reviewed	p.V746	0.999	123	0%	132	31.8%	0	-	-	-	-	HMMSmart_VPS10
SORCS1	114815	genome.wustl.edu	37	10	108434809	108434809	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013031.1	-1	reviewed	p.M646I	1.000	165	0%	194	34%	0	-	benign(0.078)	tolerated(0.14)	neutral(0.255)	HMMSmart_VPS10,superfamily_SSF110296
ADD3	120	genome.wustl.edu	37	10	111860477	111860477	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016824.3	+1	reviewed	p.E22D	1.000	105	1%	137	38%	3	33.3%	probably_damaging(0.987)	deleterious(0.02)	deleterious(0.820)	NULL
ADD3	120	genome.wustl.edu	37	10	111890220	111890220	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016824.3	+1	reviewed	p.E570K	1.000	119	0%	248	32.3%	6	50%	possibly_damaging(0.749)	deleterious(0)	deleterious(0.720)	NULL
DUSP5	1847	genome.wustl.edu	37	10	112269830	112269830	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004419.3	+1	reviewed	p.I267	1.000	26	0%	46	39.1%	10	0%	-	-	-	HMMPfam_DSPc,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_DSPc,superfamily_SSF52799
SMC3	9126	genome.wustl.edu	37	10	112338427	112338427	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005445.3	+1	reviewed	p.S131Y	1.000	276	0%	369	33.3%	7	28.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
SMC3	9126	genome.wustl.edu	37	10	112361730	112361730	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005445.3	+1	reviewed	p.R967*	1.000	59	0%	74	36.5%	25	16%	-	-	-	HMMPfam_SMC_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
SHOC2	8036	genome.wustl.edu	37	10	112769582	112769582	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007373.3	+1	reviewed	p.E512*	1.000	96	0%	116	25.9%	13	23%	-	-	-	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,HMMSmart_SM00365,superfamily_L domain-like
ADRA2A	150	genome.wustl.edu	37	10	112838248	112838248	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000681.3	+1	reviewed	p.I165T	1.000	78	0%	86	32.6%	2	0%	probably_damaging(0.976)	deleterious(0.01)	deleterious(0.824)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
GPAM	57678	genome.wustl.edu	37	10	113913340	113913340	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020918.4	-1	validated	p.L819I	1.000	200	0%	210	35.2%	2	50%	probably_damaging(0.995)	tolerated(0.42)	deleterious(0.472)	NULL
TECTB	6975	genome.wustl.edu	37	10	114044301	114044301	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_058222.1	+1	provisional	p.L29I	1.000	100	0%	139	30.9%	0	-	benign(0.008)	tolerated(0.4)	neutral(0.016)	HMMPfam_Zona_pellucida
TECTB	6975	genome.wustl.edu	37	10	114061878	114061878	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_058222.1	+1	provisional	p.L309	0.456	435	0%	481	34.3%	0	-	-	-	-	NULL
TCF7L2	6934	genome.wustl.edu	37	10	114910865	114910865	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030756.4	+1	reviewed	p.V305	0.998	185	0%	275	34.9%	16	50%	-	-	-	NULL
TCF7L2	6934	genome.wustl.edu	37	10	114910882	114910882	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030756.4	+1	reviewed	p.S311L	1.000	172	0%	233	36.9%	13	46.1%	benign(0.002)	tolerated(0.18)	neutral(0.056)	NULL
NRAP	4892	genome.wustl.edu	37	10	115401232	115401232	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198060.2	-1	validated	e13-1	1.000	246	0%	250	36%	0	-	-	-	-	-
ADRB1	153	genome.wustl.edu	37	10	115804449	115804449	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000684.2	+1	reviewed	p.S186	0.342	37	0%	37	51.4%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
C10orf118	55088	genome.wustl.edu	37	10	115895996	115895996	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018017.2	-1	validated	p.E446*	1.000	324	0%	352	33.2%	1	0%	-	-	-	NULL
TDRD1	56165	genome.wustl.edu	37	10	115970722	115970722	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198795.1	+1	reviewed	p.F552	1.000	233	0%	255	36.5%	0	-	-	-	-	HMMSmart_TUDOR,HMMPfam_TUDOR,superfamily_SSF63748
TDRD1	56165	genome.wustl.edu	37	10	115986970	115986970	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198795.1	+1	reviewed	p.E1105D	0.970	125	0.8%	199	34.7%	0	-	benign(0.183)	tolerated(0.18)	neutral(0.073)	NULL
VWA2	340706	genome.wustl.edu	37	10	116049087	116049087	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198496.1	+1	provisional	p.K654T	1.000	111	0%	155	28.4%	23	47.8%	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300
FAM160B1	57700	genome.wustl.edu	37	10	116606013	116606013	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020940.3	+1	validated	p.E429*	1.000	167	0%	312	36.2%	6	16.6%	-	-	-	HMMPfam_RAI16-like
TRUB1	142940	genome.wustl.edu	37	10	116731930	116731930	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139169.4	+1	validated	p.S211	0.965	183	0%	194	31.4%	5	20%	-	-	-	HMMPfam_TruB_N,superfamily_PsdUridine_synth_cat_dom
ATRNL1	26033	genome.wustl.edu	37	10	116879956	116879956	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207303.2	+1	validated	p.E101*	1.000	62	0%	44	36.4%	2	0%	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
ATRNL1	26033	genome.wustl.edu	37	10	117704253	117704253	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207303.2	+1	validated	p.R1368Q	1.000	163	0%	108	23.1%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
PNLIPRP3	119548	genome.wustl.edu	37	10	118220538	118220538	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001011709.2	+1	validated	p.S209L	0.101	217	0%	315	29.5%	0	-	possibly_damaging(0.907)	deleterious(0)	deleterious(0.805)	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases
PNLIPRP2	5408	genome.wustl.edu	37	10	118401676	118401676	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005396.4	+1	validated	p.L411V	0.002	145	0%	166	34.3%	0	-	possibly_damaging(0.436)	tolerated(0.16)	neutral(0.201)	NULL
KIAA1598	57698	genome.wustl.edu	37	10	118708485	118708485	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127211.1	-1	validated	p.K186N	0.996	166	0%	141	34.8%	1	100%	benign(0.003)	tolerated(0.5)	neutral(0.010)	NULL
VAX1	11023	genome.wustl.edu	37	10	118893611	118893611	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001112704.1	-1	reviewed	p.E305*	1.000	50	0%	41	36.6%	0	-	-	-	-	NULL
VAX1	11023	genome.wustl.edu	37	10	118896116	118896116	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001112704.1	-1	reviewed	p.R99Q	1.000	26	0%	25	36%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Homeodomain-like
SLC18A2	6571	genome.wustl.edu	37	10	119015156	119015156	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003054.4	+1	reviewed	p.L295I	1.000	88	0%	98	28.6%	0	-	benign(0.09)	tolerated(0.38)	neutral(0.024)	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
PDZD8	118987	genome.wustl.edu	37	10	119043231	119043231	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173791.3	-1	provisional	p.E1005*	1.000	218	0%	277	34.7%	41	46.3%	-	-	-	NULL
RAB11FIP2	22841	genome.wustl.edu	37	10	119805441	119805441	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014904.2	-1	validated	p.E78D	1.000	231	0%	300	32.7%	0	-	benign(0.009)	tolerated(0.26)	neutral(0.035)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
LOC100287264	100287264	genome.wustl.edu	37	10	120354412	120354412	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343034.1	+1	model	p.R221W	0.678	18	0%	19	36.8%	0	-	-	-	-	NULL
EIF3A	8661	genome.wustl.edu	37	10	120795664	120795664	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003750.2	-1	validated	p.E1346*	1.000	160	0%	337	30%	135	45.9%	-	-	-	NULL
EIF3A	8661	genome.wustl.edu	37	10	120802033	120802033	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003750.2	-1	validated	p.R1000Q	0.996	186	0%	267	34.1%	164	51.8%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
GRK5	2869	genome.wustl.edu	37	10	121140377	121140377	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005308.2	+1	reviewed	p.F67I	1.000	166	0%	313	37.7%	8	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam
RGS10	6001	genome.wustl.edu	37	10	121286825	121286825	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005339.1	-1	reviewed	p.R54I	1.000	82	0%	189	33.9%	27	33.3%	benign(0.041)	tolerated(0.35)	neutral(0.023)	HMMPfam_RGS,HMMSmart_RGS,superfamily_Regulat_G_prot_signal_superfam
TIAL1	7073	genome.wustl.edu	37	10	121336538	121336538	+	Nonstop_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000369092	-1	known	p.*266Y	0.000	59	0%	116	30.2%	6	16.6%	-	-	-	NULL
SEC23IP	11196	genome.wustl.edu	37	10	121658165	121658165	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007190.2	+1	reviewed	p.S130	0.000	125	0%	216	38.9%	11	36.3%	-	-	-	NULL
FGFR2	2263	genome.wustl.edu	37	10	123245037	123245037	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022970.3	-1	reviewed	p.F690	0.986	115	0%	151	37.1%	4	25%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
TACC2	10579	genome.wustl.edu	37	10	123842206	123842206	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206862.2	+1	reviewed	p.S64I	0.003	90	0%	76	28.9%	2	0%	possibly_damaging(0.922)	deleterious(0)	deleterious(0.816)	NULL
TACC2	10579	genome.wustl.edu	37	10	123842909	123842909	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206862.2	+1	reviewed	p.Q298H	0.001	30	0%	72	31.9%	0	-	possibly_damaging(0.855)	deleterious(0.01)	deleterious(0.736)	NULL
TACC2	10579	genome.wustl.edu	37	10	123843390	123843390	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206862.2	+1	reviewed	p.E459*	0.001	84	0%	170	38.8%	1	0%	-	-	-	NULL
TACC2	10579	genome.wustl.edu	37	10	123844856	123844856	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206862.2	+1	reviewed	p.K947	0.000	70	0%	144	35.4%	3	66.6%	-	-	-	NULL
TACC2	10579	genome.wustl.edu	37	10	123844926	123844926	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206862.2	+1	reviewed	p.D971Y	0.002	37	0%	90	43.3%	3	100%	possibly_damaging(0.926)	deleterious(0)	deleterious(0.819)	NULL
DMBT1	1755	genome.wustl.edu	37	10	124339169	124339169	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007329.2	+1	reviewed	p.R252Q	0.004	371	0.3%	541	36.8%	0	-	benign(0.056)	tolerated(1)	neutral(0.004)	HMMPfam_SRCR,PatternScan_SRCR_1,HMMSmart_SM00202,superfamily_SRCR-like
DMBT1	1755	genome.wustl.edu	37	10	124341319	124341319	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007329.2	+1	reviewed	p.P348	0.000	1013	0.1%	1554	17.7%	0	-	-	-	-	NULL
DMBT1	1755	genome.wustl.edu	37	10	124377590	124377590	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007329.2	+1	reviewed	p.R1521Q	0.986	376	0%	537	31.5%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_SRCR,PatternScan_SRCR_1,HMMSmart_SM00202,superfamily_SRCR-like
DMBT1	1755	genome.wustl.edu	37	10	124380872	124380872	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007329.2	+1	reviewed	p.E1733K	0.973	232	0%	262	32.4%	0	-	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like
DMBT1	1755	genome.wustl.edu	37	10	124390636	124390636	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007329.2	+1	reviewed	p.V1933A	0.151	215	0%	318	36.8%	0	-	possibly_damaging(0.476)	tolerated(0.09)	neutral(0.454)	HMMPfam_SRCR,HMMSmart_SM00202,superfamily_SRCR-like
C10orf88	80007	genome.wustl.edu	37	10	124708295	124708295	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024942.3	-1	validated	p.S173Y	0.017	139	0%	150	39.3%	4	0%	benign(0.004)	tolerated(0.18)	neutral(0.056)	NULL
PSTK	118672	genome.wustl.edu	37	10	124742896	124742896	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153336.2	+1	validated	p.G206E	0.000	143	0%	201	37.8%	4	50%	benign(0)	tolerated(1)	-	HMMPfam_KTI12,superfamily_P-loop containing nucleoside triphosphate hydrolases
IKZF5	64376	genome.wustl.edu	37	10	124753794	124753794	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022466.5	-1	provisional	p.Q254H	1.000	172	0%	323	35.3%	5	20%	probably_damaging(0.996)	tolerated(0.11)	deleterious(0.733)	NULL
ACADSB	36	genome.wustl.edu	37	10	124802675	124802675	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001609.3	+1	reviewed	p.F265	1.000	173	0%	223	30.5%	2	0%	-	-	-	superfamily_Acyl-CoA dehydrogenase NM domain-like
CPXM2	119587	genome.wustl.edu	37	10	125528214	125528214	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198148.2	-1	validated	p.A376V	0.999	39	0%	53	35.8%	7	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,superfamily_Zn-dependent exopeptidases
CHST15	51363	genome.wustl.edu	37	10	125780868	125780868	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015892.2	-1	validated	p.E417	0.586	101	0%	140	32.9%	2	100%	-	-	-	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
CHST15	51363	genome.wustl.edu	37	10	125804295	125804295	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015892.2	-1	validated	p.F229	0.910	148	0%	314	34.1%	3	0%	-	-	-	NULL
ZRANB1	54764	genome.wustl.edu	37	10	126673439	126673439	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017580.2	+1	validated	p.R669W	0.992	80	0%	86	32.6%	30	40%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
BCCIP	56647	genome.wustl.edu	37	10	127522501	127522501	+	Nonsense_Mutation	SNP	G	G	T	rs17153610		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016567.3	+1	reviewed	p.E254*	1.000	125	0%	176	33%	54	40.7%	-	-	-	NULL
DHX32	55760	genome.wustl.edu	37	10	127527585	127527585	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018180.2	-1	reviewed	p.S622	0.010	124	0%	209	29.7%	41	43.9%	-	-	-	HMMPfam_DUF1605
ADAM12	8038	genome.wustl.edu	37	10	127967504	127967504	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003474.4	-1	reviewed	p.I80	0.839	422	0%	364	31.3%	1	0%	-	-	-	HMMPfam_Pep_M12B_propep
NPS	594857	genome.wustl.edu	37	10	129350776	129350776	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001030013.1	+1	provisional	p.R48I	0.197	276	0%	286	26.9%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
CLRN3	119467	genome.wustl.edu	37	10	129676611	129676611	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152311.3	-1	validated	p.F161	0.000	134	0%	227	35.7%	0	-	-	-	-	NULL
CLRN3	119467	genome.wustl.edu	37	10	129676676	129676676	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152311.3	-1	validated	p.V140I	0.000	84	0%	169	37.9%	0	-	benign(0.001)	tolerated(0.2)	neutral(0.049)	NULL
PTPRE	5791	genome.wustl.edu	37	10	129845728	129845728	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000439034	+1	known	p.C74*	0.019	59	0%	38	31.6%	0	-	-	-	-	NULL
PTPRE	5791	genome.wustl.edu	37	10	129866455	129866455	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006504.4	+1	reviewed	p.F304	0.875	35	0%	61	37.7%	3	0%	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
PTPRE	5791	genome.wustl.edu	37	10	129874922	129874922	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006504.4	+1	reviewed	p.T552M	0.001	134	0%	187	25.1%	1	0%	probably_damaging(0.982)	tolerated(0.13)	deleterious(0.679)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II
MKI67	4288	genome.wustl.edu	37	10	129907384	129907384	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002417.4	-1	reviewed	p.R907I	0.002	304	0%	435	33.8%	5	40%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
EBF3	253738	genome.wustl.edu	37	10	131755558	131755558	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005463.1	-1	validated	p.R173I	1.000	307	0.3%	398	30.9%	2	0%	probably_damaging(0.977)	deleterious(0)	deleterious(0.863)	NULL
TCERG1L	256536	genome.wustl.edu	37	10	133107448	133107448	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174937.3	-1	validated	p.S153R	0.982	145	0%	222	30.6%	0	-	benign(0.002)	tolerated(0.37)	neutral(0.019)	NULL
PPP2R2D	55844	genome.wustl.edu	37	10	133761289	133761289	+	Missense_Mutation	SNP	C	C	T	rs142846802		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000455566	+1	known	p.S328L	0.025	60	0%	58	25.9%	41	36.5%	benign(0.254)	deleterious(0)	deleterious(0.471)	HMMSmart_SM00320,superfamily_WD40 repeat-like
JAKMIP3	282973	genome.wustl.edu	37	10	133978172	133978172	+	Splice_Site	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105521.2	+1	provisional	e20-2	1.000	177	0%	310	24.5%	0	-	-	-	-	-
DPYSL4	10570	genome.wustl.edu	37	10	134014421	134014421	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006426.2	+1	validated	p.F348	1.000	89	0%	83	41%	2	50%	-	-	-	HMMPfam_Amidohydro_1,superfamily_Composite domain of metallo-dependent hydrolases,superfamily_Metallo-dependent hydrolases
INPP5A	3632	genome.wustl.edu	37	10	134563295	134563295	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005539.3	+1	reviewed	p.K283N	1.000	51	0%	94	26.6%	13	15.3%	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	HMMSmart_IPPc,HMMPfam_Exo_endo_phos,superfamily_Exo_endo_phos
KNDC1	85442	genome.wustl.edu	37	10	135025185	135025185	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152643.6	+1	validated	p.I1353	0.943	72	0%	69	26.1%	2	0%	-	-	-	HMMSmart_SM00229,superfamily_Ras GEF
PRAP1	118471	genome.wustl.edu	37	10	135164935	135164935	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145202.4	+1	validated	p.E42D	0.931	139	0%	191	28.8%	0	-	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	NULL
PRAP1	118471	genome.wustl.edu	37	10	135165804	135165804	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145202.4	+1	validated	p.E106K	0.979	60	0%	77	36.4%	2	0%	possibly_damaging(0.922)	deleterious(0)	deleterious(0.816)	NULL
ECHS1	1892	genome.wustl.edu	37	10	135178183	135178183	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004092.3	-1	reviewed	p.L262	0.997	215	0%	347	27.1%	268	35%	-	-	-	superfamily_SSF52096
ECHS1	1892	genome.wustl.edu	37	10	135183499	135183499	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004092.3	-1	reviewed	p.F108C	1.000	175	0%	285	37.5%	166	39.7%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_ECH,superfamily_SSF52096
PAOX	196743	genome.wustl.edu	37	10	135197516	135197516	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152911.2	+1	validated	p.E307D	0.905	96	0%	174	31.6%	2	50%	benign(0.002)	tolerated(0.44)	neutral(0.013)	HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain
MTG1	92170	genome.wustl.edu	37	10	135212723	135212723	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138384.2	+1	validated	p.R138Q	1.000	78	0%	117	33.3%	52	51.9%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_P-loop containing nucleoside triphosphate hydrolases
MTG1	92170	genome.wustl.edu	37	10	135233611	135233611	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138384.2	+1	validated	p.S316F	0.508	72	0%	76	32.9%	104	47.1%	benign(0.258)	tolerated(0.1)	neutral(0.314)	NULL
RIC8A	60626	genome.wustl.edu	37	11	209842	209842	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021932.4	+1	provisional	p.R190C	0.043	51	0%	65	38.5%	42	40.4%	possibly_damaging(0.739)	deleterious(0.04)	deleterious(0.619)	HMMPfam_Ric8
PSMD13	5719	genome.wustl.edu	37	11	244732	244732	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175932.2	+1	validated	p.L125V	0.640	117	0%	284	35.6%	68	64.7%	possibly_damaging(0.925)	deleterious(0)	deleterious(0.818)	NULL
PSMD13	5719	genome.wustl.edu	37	11	248825	248825	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175932.2	+1	validated	p.L208	0.989	117	0%	229	38.4%	130	10.7%	-	-	-	NULL
NLRP6	171389	genome.wustl.edu	37	11	279849	279849	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138329.1	+1	provisional	p.S109F	0.002	17	0%	28	32.1%	0	-	possibly_damaging(0.509)	tolerated(0.38)	neutral(0.188)	NULL
IFITM3	10410	genome.wustl.edu	37	11	320720	320720	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021034.2	-1	validated	p.L32M	0.000	75	0%	119	36.1%	797	0.5%	benign(0.007)	tolerated(0.14)	neutral(0.249)	NULL
B4GALNT4	338707	genome.wustl.edu	37	11	379966	379966	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178537.4	+1	validated	p.F863	0.968	39	0%	31	45.2%	5	0%	-	-	-	HMMPfam_CHGN,superfamily_SSF53448
B4GALNT4	338707	genome.wustl.edu	37	11	380313	380313	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178537.4	+1	validated	p.L913I	1.000	40	2.5%	32	25%	5	20%	possibly_damaging(0.943)	deleterious(0.04)	deleterious(0.736)	HMMPfam_CHGN,superfamily_SSF53448
SIGIRR	59307	genome.wustl.edu	37	11	407872	407872	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135053.1	-1	validated	p.C142	0.911	32	0%	33	36.4%	53	35.8%	unknown(0)	deleterious(0.02)	-	NULL
ANO9	338440	genome.wustl.edu	37	11	419588	419588	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012302.2	-1	validated	p.T643I	0.000	57	0%	94	36.2%	6	0%	benign(0.246)	tolerated(0.12)	neutral(0.286)	HMMPfam_DUF590
PHRF1	57661	genome.wustl.edu	37	11	591409	591409	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020901.2	+1	validated	p.R149Q	0.999	264	0%	460	30.9%	16	50%	benign(0.142)	deleterious(0)	neutral(0.457)	superfamily_SSF57850
PHRF1	57661	genome.wustl.edu	37	11	607787	607787	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020901.2	+1	validated	p.F776	0.483	18	0%	35	42.9%	22	40.9%	-	-	-	NULL
DEAF1	10522	genome.wustl.edu	37	11	691531	691531	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021008.2	-1	validated	p.A119	0.010	56	0%	80	35%	14	35.7%	-	-	-	NULL
CHID1	66005	genome.wustl.edu	37	11	899390	899390	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142676.1	-1	validated	p.F211	0.999	74	0%	127	33.1%	234	40.1%	-	-	-	HMMSmart_Glyco_18,superfamily_Glyco_hydro_cat
MUC6	4588	genome.wustl.edu	37	11	1031685	1031685	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005961.2	-1	validated	p.F135	0.892	56	0%	67	40.3%	1	100%	-	-	-	HMMPfam_VWD,HMMSmart_SM00216
MUC2	4583	genome.wustl.edu	37	11	1079701	1079701	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002457.2	+1	reviewed	p.S306	0.187	17	0%	17	35.3%	0	-	-	-	-	superfamily_Serine proterase inhibitors
MUC5B	727897	genome.wustl.edu	37	11	1267410	1267410	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002458.1	+1	validated	p.P3103	0.000	277	0.4%	527	36.8%	0	-	-	-	-	NULL
MUC5B	727897	genome.wustl.edu	37	11	1268763	1268763	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002458.1	+1	validated	p.S3554	0.000	288	0%	413	31.2%	0	-	-	-	-	NULL
MUC5B	727897	genome.wustl.edu	37	11	1270290	1270290	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002458.1	+1	validated	p.Q4063	0.001	524	0%	937	19.2%	3	33.3%	-	-	-	NULL
MUC5B	727897	genome.wustl.edu	37	11	1270556	1270556	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002458.1	+1	validated	p.G4152D	0.016	269	0%	248	24.6%	1	0%	unknown(0)	-	-	NULL
MUC5B	727897	genome.wustl.edu	37	11	1270585	1270585	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002458.1	+1	validated	p.R4162S	0.008	234	0%	258	22.9%	0	-	unknown(0)	-	-	NULL
MUC5B	727897	genome.wustl.edu	37	11	1274083	1274083	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002458.1	+1	validated	p.C5033	0.058	53	0%	79	36.7%	1	0%	-	-	-	NULL
KRTAP5-1	387264	genome.wustl.edu	37	11	1605952	1605952	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005922.1	-1	validated	p.G176	1.000	86	0%	131	14.5%	1	0%	-	-	-	NULL
TNNT3	7140	genome.wustl.edu	37	11	1944119	1944119	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006757.3	+1	reviewed	p.E5D	1.000	132	0%	218	29.8%	0	-	unknown(0)	deleterious(0)	-	NULL
TNNT3	7140	genome.wustl.edu	37	11	1955025	1955025	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006757.3	+1	reviewed	p.R82	0.990	63	0%	133	42.1%	0	-	-	-	-	HMMPfam_Troponin
MRPL23	6150	genome.wustl.edu	37	11	1977578	1977578	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021134.3	+1	reviewed	p.L130	0.036	27	0%	43	37.2%	232	37.9%	-	-	-	NULL
SLC22A18	5002	genome.wustl.edu	37	11	2943415	2943415	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000441077	+1	known	p.S152L	0.000	60	0%	69	31.9%	9	0%	-	-	-	NULL
NAP1L4	4676	genome.wustl.edu	37	11	2993398	2993398	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005969.3	-1	reviewed	p.K83N	1.000	229	0%	336	37.2%	49	42.8%	possibly_damaging(0.691)	deleterious(0.04)	deleterious(0.597)	HMMPfam_NAP
ZNF195	7748	genome.wustl.edu	37	11	3380849	3380849	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130520.1	-1	validated	p.E463D	0.973	154	0%	226	40.3%	25	52%	benign(0.379)	deleterious(0.01)	deleterious(0.526)	superfamily_C2H2 and C2HC zinc fingers
ART5	116969	genome.wustl.edu	37	11	3661226	3661226	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079536.1	-1	reviewed	p.R145*	0.028	50	0%	92	35.9%	0	-	-	-	-	HMMPfam_ART,superfamily_ADP-ribosylation
CHRNA10	57053	genome.wustl.edu	37	11	3691031	3691031	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020402.2	-1	provisional	p.D68N	1.000	124	0%	197	34%	0	-	possibly_damaging(0.93)	deleterious(0)	deleterious(0.821)	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD
NUP98	4928	genome.wustl.edu	37	11	3744669	3744669	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016320.4	-1	reviewed	p.K622E	1.000	125	0%	231	37.7%	11	18.1%	benign(0.023)	tolerated(0.51)	neutral(0.010)	NULL
TRIM21	6737	genome.wustl.edu	37	11	4411571	4411571	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003141.3	-1	reviewed	p.F23	0.021	46	0%	55	36.4%	14	28.5%	-	-	-	HMMSmart_RING,HMMPfam_zf-C3HC4,superfamily_SSF57850
OR52K2	119774	genome.wustl.edu	37	11	4471491	4471491	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005172.2	+1	validated	p.V308L	0.054	200	0%	266	32%	0	-	benign(0)	tolerated(0.96)	-	superfamily_Family A G protein-coupled receptor-like
ENSG00000225101	0	genome.wustl.edu	37	11	4496741	4496741	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000416879	+1	known	p.R18H	0.031	157	0%	182	31.3%	1	0%	-	-	-	superfamily_Family A G protein-coupled receptor-like
OR51E1	143503	genome.wustl.edu	37	11	4674429	4674429	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152430.3	+1	validated	p.L225I	1.000	396	0%	537	33.5%	0	-	possibly_damaging(0.584)	tolerated(0.19)	neutral(0.251)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR51F2	119694	genome.wustl.edu	37	11	4843076	4843076	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004753.1	+1	provisional	p.R154Q	0.002	217	0%	192	31.2%	0	-	probably_damaging(0.997)	tolerated(0.24)	deleterious(0.504)	HMMPfam_7tm_1,superfamily_SSF81321
OR51F2	119694	genome.wustl.edu	37	11	4843089	4843089	+	Silent	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004753.1	+1	provisional	p.I158	0.039	208	0%	181	33.1%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR51T1	401665	genome.wustl.edu	37	11	4903446	4903446	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004759.1	+1	provisional	p.V133G	0.013	392	0%	348	33%	0	-	possibly_damaging(0.861)	deleterious(0)	deleterious(0.778)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR51T1	401665	genome.wustl.edu	37	11	4903992	4903992	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004759.1	+1	provisional	p.V315A	0.981	235	0%	156	28.2%	0	-	probably_damaging(0.974)	tolerated(0.07)	deleterious(0.735)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR51G2	81282	genome.wustl.edu	37	11	4936359	4936359	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005238.1	-1	provisional	p.L179I	0.974	132	0%	201	32.8%	0	-	possibly_damaging(0.896)	tolerated(0.12)	deleterious(0.614)	HMMPfam_7tm_1,superfamily_SSF81321
OR51A2	401667	genome.wustl.edu	37	11	4976291	4976291	+	Missense_Mutation	SNP	G	G	T	rs55889636	byCluster;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004748.1	-1	provisional	p.S218Y	0.881	322	0%	344	28.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
OR51A2	401667	genome.wustl.edu	37	11	4976494	4976494	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004748.1	-1	provisional	p.F150	0.000	205	0%	252	32.5%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR51A2	401667	genome.wustl.edu	37	11	4976610	4976610	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004748.1	-1	provisional	p.L112M	0.005	200	0%	227	33.9%	0	-	benign(0)	tolerated(1)	-	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321
OR51V1	283111	genome.wustl.edu	37	11	5221893	5221893	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004760.2	-1	validated	p.P13H	0.002	103	0%	137	23.4%	0	-	unknown(0)	tolerated(0.06)	-	NULL
HBG1	3047	genome.wustl.edu	37	11	5270968	5270968	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000559.2	-1	reviewed	p.D23Y	0.039	585	0%	730	18.9%	0	-	possibly_damaging(0.459)	deleterious(0)	deleterious(0.595)	HMMPfam_Globin,superfamily_Globin-like
OR51B6	390058	genome.wustl.edu	37	11	5373264	5373264	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004750.1	+1	provisional	p.F176S	0.986	362	0%	341	31.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_SSF81321
OR51B6	390058	genome.wustl.edu	37	11	5373395	5373395	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004750.1	+1	provisional	p.L220I	0.996	401	0.2%	468	33.1%	0	-	possibly_damaging(0.54)	tolerated(0.18)	neutral(0.239)	HMMPfam_7tm_1,superfamily_SSF81321
OR51M1	390059	genome.wustl.edu	37	11	5410760	5410760	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004756.2	+1	validated	p.F44L	0.000	280	0%	372	30.6%	0	-	probably_damaging(0.955)	tolerated(0.16)	neutral(0.458)	superfamily_Family A G protein-coupled receptor-like
OR51M1	390059	genome.wustl.edu	37	11	5410940	5410940	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004756.2	+1	validated	p.I104	0.305	228	0%	282	32.3%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR51Q1	390061	genome.wustl.edu	37	11	5444111	5444111	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004757.2	+1	validated	p.I227	0.000	161	0%	179	34.1%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR51Q1	390061	genome.wustl.edu	37	11	5444261	5444261	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004757.2	+1	validated	p.I277	0.129	102	0%	109	25.7%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR51I2	390064	genome.wustl.edu	37	11	5474918	5474918	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004754.2	+1	validated	p.S67F	0.995	165	0%	172	34.3%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_7tm_1,superfamily_SSF81321
UBQLN3	50613	genome.wustl.edu	37	11	5529304	5529304	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017481.2	-1	reviewed	p.P495	0.044	61	0%	62	25.8%	0	-	-	-	-	NULL
UBQLNL	143630	genome.wustl.edu	37	11	5536513	5536513	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145053.4	-1	validated	p.E387K	0.000	449	0%	641	34.6%	0	-	probably_damaging(0.957)	tolerated(0.12)	deleterious(0.661)	NULL
UBQLNL	143630	genome.wustl.edu	37	11	5536528	5536528	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145053.4	-1	validated	p.A382T	0.001	494	0%	651	33%	0	-	possibly_damaging(0.689)	deleterious(0.05)	deleterious(0.592)	NULL
TRIM6-TRIM34	445372	genome.wustl.edu	37	11	5626762	5626762	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003819.2	+1	reviewed	p.R267C	0.331	104	0%	194	34%	0	-	possibly_damaging(0.838)	tolerated(0.05)	deleterious(0.665)	NULL
TRIM34	53840	genome.wustl.edu	37	11	5662429	5662429	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130390.2	+1	reviewed	p.W261*	0.586	434	0%	748	35.7%	0	-	-	-	-	NULL
TRIM6-TRIM34	445372	genome.wustl.edu	37	11	5664631	5664631	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003819.2	+1	reviewed	p.L741I	0.013	152	0%	226	32.7%	2	0%	benign(0.001)	tolerated(0.31)	neutral(0.027)	HMMPfam_SPRY,HMMSmart_SPRY
OR56B1	387748	genome.wustl.edu	37	11	5758225	5758225	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005180.1	+1	provisional	p.R160I	0.994	266	0%	299	29.8%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_7tm_1,superfamily_SSF81321
OR52N4	390072	genome.wustl.edu	37	11	5776816	5776816	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005175.2	+1	validated	p.I282	0.033	302	0%	281	30.6%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR52L1	338751	genome.wustl.edu	37	11	6007469	6007469	+	Missense_Mutation	SNP	G	G	A	rs141030184	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005173.2	-1	validated	p.A231V	0.383	164	0%	234	40.2%	0	-	benign(0)	tolerated(0.21)	neutral(0.044)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR52L2P	79274	genome.wustl.edu	37	11	6078955	6078955	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000316540	-1	known	p.L184R	0.267	108	0%	119	38.7%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR56B4	196335	genome.wustl.edu	37	11	6129055	6129055	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005181.1	+1	provisional	p.S16F	0.000	91	0%	148	27.7%	0	-	probably_damaging(0.99)	deleterious(0.02)	deleterious(0.825)	superfamily_SSF81321
OR52W1	120787	genome.wustl.edu	37	11	6220604	6220605	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005178.1	+1	provisional	p.P51fs	0.000:0.000	-	-	-	-	-	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
C11orf42	160298	genome.wustl.edu	37	11	6232257	6232257	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173525.2	+1	validated	p.F329	1.000	38	0%	23	26.1%	1	0%	-	-	-	NULL
FAM160A2	84067	genome.wustl.edu	37	11	6238727	6238727	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032127.3	-1	validated	p.E711*	0.997	78	0%	105	30.5%	22	27.2%	-	-	-	NULL
FAM160A2	84067	genome.wustl.edu	37	11	6243764	6243764	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032127.3	-1	validated	p.L367F	1.000	190	0%	361	32.7%	19	10.5%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_RAI16-like
FAM160A2	84067	genome.wustl.edu	37	11	6245214	6245214	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032127.3	-1	validated	p.E135*	1.000	44	0%	27	33.3%	14	50%	-	-	-	HMMPfam_RAI16-like
CNGA4	1262	genome.wustl.edu	37	11	6265271	6265271	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037329.2	+1	validated	p.L454	1.000	78	0%	103	33%	0	-	-	-	-	HMMPfam_cNMP_binding,HMMSmart_SM00100,superfamily_cAMP-binding domain-like
SMPD1	6609	genome.wustl.edu	37	11	6415691	6415691	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000543.3	+1	reviewed	p.E584K	0.964	75	0%	77	36.4%	53	22.6%	benign(0.159)	tolerated(0.36)	neutral(0.034)	NULL
DNHD1	144132	genome.wustl.edu	37	11	6579361	6579361	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144666.2	+1	provisional	p.P2946S	0.966	88	0%	114	30.7%	0	-	probably_damaging(0.999)	tolerated(0.32)	deleterious(0.514)	NULL
DNHD1	144132	genome.wustl.edu	37	11	6585118	6585118	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144666.2	+1	provisional	p.L3350	0.994	35	0%	30	36.7%	0	-	-	-	-	NULL
TPP1	1200	genome.wustl.edu	37	11	6636774	6636774	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000391.3	-1	reviewed	p.G389R	1.000	161	0%	281	32.7%	55	45.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Subtilisin-like
DCHS1	8642	genome.wustl.edu	37	11	6651021	6651021	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003737.2	-1	reviewed	p.V1639	0.242	23	0%	29	37.9%	1	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
DCHS1	8642	genome.wustl.edu	37	11	6655525	6655525	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003737.2	-1	reviewed	p.D604N	1.000	72	0%	99	32.3%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
DCHS1	8642	genome.wustl.edu	37	11	6662628	6662628	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003737.2	-1	reviewed	p.A73S	0.529	16	0%	19	31.6%	1	0%	benign(0.007)	tolerated(0.84)	neutral(0.001)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
OR2AG2	338755	genome.wustl.edu	37	11	6789367	6789367	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004490.1	-1	provisional	p.I274	0.997	300	0%	531	33.7%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR6A2	8590	genome.wustl.edu	37	11	6816425	6816425	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003696.2	-1	provisional	p.S172Y	0.173	125	0%	158	23.4%	0	-	possibly_damaging(0.86)	deleterious(0.05)	deleterious(0.678)	HMMPfam_7tm_1,superfamily_SSF81321
OR10A5	144124	genome.wustl.edu	37	11	6867597	6867597	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178168.1	+1	provisional	p.K228N	0.998	331	0%	446	31.2%	0	-	benign(0.001)	deleterious(0.01)	neutral(0.406)	HMMPfam_7tm_1,superfamily_SSF81321
OR10A4	283297	genome.wustl.edu	37	11	6898503	6898503	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207186.2	+1	validated	p.L209I	1.000	245	0%	291	36.1%	0	-	benign(0.018)	tolerated(0.16)	neutral(0.060)	HMMPfam_7tm_1,superfamily_SSF81321
OR2D2	120776	genome.wustl.edu	37	11	6913545	6913545	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003700.1	-1	provisional	p.L63I	0.996	160	0%	199	31.7%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_7tm_1,superfamily_SSF81321
ZNF215	7762	genome.wustl.edu	37	11	6977395	6977395	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013250.2	+1	validated	p.R396Q	0.004	125	0%	123	37.4%	0	-	probably_damaging(0.999)	tolerated(0.59)	deleterious(0.495)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
NLRP14	338323	genome.wustl.edu	37	11	7064670	7064670	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176822.3	+1	reviewed	p.E471	0.004	130	0%	140	38.6%	0	-	-	-	-	NULL
OLFML1	283298	genome.wustl.edu	37	11	7507122	7507122	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198474.3	+1	validated	p.R6*	0.000	234	0%	231	34.6%	5	0%	-	-	-	NULL
OLFML1	283298	genome.wustl.edu	37	11	7509417	7509417	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198474.3	+1	validated	p.F63L	1.000	80	0%	106	31.1%	3	0%	unknown(0)	-	-	NULL
PPFIBP2	8495	genome.wustl.edu	37	11	7631561	7631561	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003621.2	+1	validated	p.D176N	0.999	329	0%	609	34.3%	7	14.2%	benign(0.037)	deleterious(0.01)	neutral(0.408)	NULL
OVCH2	341277	genome.wustl.edu	37	11	7716874	7716874	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198185.2	-1	validated	p.F403	0.982	172	0%	198	26.8%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
OVCH2	341277	genome.wustl.edu	37	11	7718062	7718062	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198185.2	-1	validated	p.S364Y	0.830	186	0%	246	31.3%	0	-	possibly_damaging(0.691)	deleterious(0.01)	deleterious(0.653)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
OR5P2	120065	genome.wustl.edu	37	11	7818426	7818426	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153444.1	-1	provisional	p.D22Y	0.001	79	0%	73	31.5%	0	-	probably_damaging(0.981)	deleterious(0.03)	deleterious(0.790)	superfamily_SSF81321
OR10A6	390093	genome.wustl.edu	37	11	7949338	7949338	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004461.1	-1	provisional	p.S291I	0.533	223	0%	234	35.5%	0	-	possibly_damaging(0.691)	deleterious(0)	deleterious(0.692)	superfamily_SSF81321
OR10A6	390093	genome.wustl.edu	37	11	7949397	7949397	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004461.1	-1	provisional	p.K271N	0.746	245	0.4%	272	28.3%	0	-	probably_damaging(0.999)	tolerated(0.22)	deleterious(0.532)	HMMPfam_7tm_1,superfamily_SSF81321
OR10A3	26496	genome.wustl.edu	37	11	7960881	7960881	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003745.1	-1	provisional	p.L63I	0.998	144	0%	207	24.6%	0	-	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
NLRP10	338322	genome.wustl.edu	37	11	7981377	7981377	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176821.3	-1	reviewed	p.K594N	0.001	208	0%	282	35.5%	0	-	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	NULL
STK33	65975	genome.wustl.edu	37	11	8414133	8414133	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030906.2	-1	validated	p.V490A	0.000	303	0%	426	27.7%	6	50%	benign(0.067)	tolerated(0.47)	neutral(0.015)	NULL
STK33	65975	genome.wustl.edu	37	11	8435232	8435232	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030906.2	-1	validated	p.K385T	0.001	284	0%	299	34.8%	5	60%	benign(0)	tolerated(1)	-	superfamily_Protein kinase-like (PK-like)
STK33	65975	genome.wustl.edu	37	11	8462292	8462292	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030906.2	-1	validated	p.V294I	1.000	93	0%	80	27.5%	4	50%	possibly_damaging(0.553)	tolerated(0.16)	neutral(0.248)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
TRIM66	9866	genome.wustl.edu	37	11	8639495	8639495	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014818.1	-1	validated	p.V1216A	1.000	188	0%	306	29.4%	2	0%	possibly_damaging(0.942)	deleterious(0)	deleterious(0.832)	NULL
NRIP3	56675	genome.wustl.edu	37	11	9005437	9005437	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020645.2	-1	validated	p.S232Y	0.845	278	0%	456	34.2%	1	100%	possibly_damaging(0.528)	deleterious(0)	deleterious(0.623)	NULL
NRIP3	56675	genome.wustl.edu	37	11	9005463	9005463	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020645.2	-1	validated	p.E223D	1.000	307	0%	526	35.2%	1	0%	benign(0.137)	tolerated(0.38)	neutral(0.029)	NULL
NRIP3	56675	genome.wustl.edu	37	11	9005629	9005629	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020645.2	-1	validated	p.R202Q	1.000	188	0%	356	38.5%	1	100%	benign(0.036)	deleterious(0.04)	neutral(0.351)	superfamily_Pept_Aspartic,HMMPfam_Asp_protease
NRIP3	56675	genome.wustl.edu	37	11	9007398	9007398	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020645.2	-1	validated	e4-1	1.000	125	0%	208	29.8%	0	-	-	-	-	-
SCUBE2	57758	genome.wustl.edu	37	11	9049077	9049077	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020974.2	-1	validated	p.F816L	1.000	244	0%	331	34.1%	3	0%	possibly_damaging(0.829)	deleterious(0)	deleterious(0.759)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
SCUBE2	57758	genome.wustl.edu	37	11	9069079	9069079	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020974.2	-1	validated	p.R580Q	0.997	108	0%	122	27.9%	1	0%	probably_damaging(0.96)	deleterious(0)	deleterious(0.848)	NULL
TMEM41B	440026	genome.wustl.edu	37	11	9316856	9316856	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015012.2	-1	validated	p.K106	1.000	123	0%	246	28.9%	21	52.3%	-	-	-	NULL
SWAP70	23075	genome.wustl.edu	37	11	9754216	9754216	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015055.2	+1	validated	p.A347T	1.000	79	0%	114	41.2%	6	33.3%	probably_damaging(0.999)	tolerated(0.28)	deleterious(0.522)	NULL
SBF2	81846	genome.wustl.edu	37	11	9834095	9834095	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030962.3	-1	reviewed	p.S1380Y	1.000	114	0%	164	33.5%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_(Phosphotyrosine protein) phosphatases II
SBF2	81846	genome.wustl.edu	37	11	9874255	9874255	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030962.3	-1	reviewed	p.R860*	1.000	157	0%	191	26.7%	3	0%	-	-	-	NULL
AMPD3	272	genome.wustl.edu	37	11	10526104	10526104	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000480.2	+1	reviewed	p.L684	0.874	121	0.8%	189	31.2%	1	0%	-	-	-	HMMPfam_A_deaminase,superfamily_SSF51556
RNF141	50862	genome.wustl.edu	37	11	10555654	10555654	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016422.3	-1	reviewed	p.E18*	1.000	251	0%	418	32.5%	4	0%	-	-	-	NULL
MRVI1	10335	genome.wustl.edu	37	11	10603531	10603531	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098579.1	-1	reviewed	p.G739V	1.000	198	0%	231	23.8%	2	0%	probably_damaging(0.995)	deleterious(0.03)	deleterious(0.822)	HMMPfam_MRVI1
EIF4G2	1982	genome.wustl.edu	37	11	10828867	10828867	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000429377	-1	known	p.K65	1.000	72	0%	116	32.8%	120	45%	-	-	-	NULL
ZBED5	58486	genome.wustl.edu	37	11	10876045	10876045	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143667.1	-1	reviewed	p.R150*	1.000	224	0%	323	33.1%	19	57.8%	-	-	-	NULL
USP47	55031	genome.wustl.edu	37	11	11964232	11964232	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017944.3	+1	validated	p.I820	0.950	89	0%	89	41.6%	15	46.6%	-	-	-	NULL
MICAL2	9645	genome.wustl.edu	37	11	12281375	12281375	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014632.2	+1	provisional	p.R1089W	0.002	61	0%	103	27.2%	11	9%	possibly_damaging(0.862)	deleterious(0.04)	deleterious(0.682)	NULL
MICALCL	84953	genome.wustl.edu	37	11	12315302	12315302	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032867.2	+1	validated	p.E108D	0.004	77	0%	135	35.6%	0	-	benign(0.015)	deleterious(0)	neutral(0.445)	NULL
MICALCL	84953	genome.wustl.edu	37	11	12315811	12315811	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032867.2	+1	validated	p.R278Q	0.418	36	0%	39	43.6%	0	-	possibly_damaging(0.938)	deleterious(0.04)	deleterious(0.732)	NULL
MICALCL	84953	genome.wustl.edu	37	11	12376376	12376376	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032867.2	+1	validated	p.Q625H	1.000	175	0%	277	34.3%	0	-	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	NULL
MICALCL	84953	genome.wustl.edu	37	11	12379958	12379958	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032867.2	+1	validated	p.E674*	0.998	102	0%	209	36.8%	1	0%	-	-	-	NULL
PARVA	55742	genome.wustl.edu	37	11	12525924	12525924	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018222.3	+1	provisional	p.R202H	1.000	214	0%	279	38.7%	44	18.1%	benign(0.228)	deleterious(0.01)	neutral(0.428)	HMMPfam_CH,superfamily_Calponin-homology domain CH-domain
ARNTL	406	genome.wustl.edu	37	11	13388320	13388320	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001030272.1	+1	reviewed	p.D221Y	1.000	107	0%	133	28.6%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PAS
ARNTL	406	genome.wustl.edu	37	11	13400046	13400046	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000396441	+1	known	p.K103T	0.000	90	0%	104	29.8%	0	-	-	-	-	NULL
BTBD10	84280	genome.wustl.edu	37	11	13410443	13410443	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032320.5	-1	validated	p.L455I	1.000	109	0%	113	26.5%	25	44%	probably_damaging(0.967)	tolerated(0.09)	deleterious(0.706)	NULL
FAR1	84188	genome.wustl.edu	37	11	13716436	13716436	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032228.5	+1	validated	p.V42F	1.000	190	0%	290	28.3%	10	70%	possibly_damaging(0.789)	deleterious(0.01)	deleterious(0.702)	HMMPfam_NAD_binding_4,superfamily_NAD(P)-bd
SPON1	10418	genome.wustl.edu	37	11	14157106	14157106	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000310358	+1	known	p.R272*	1.000	79	0%	192	34.9%	7	0%	-	-	-	HMMPfam_Spond_N
SPON1	10418	genome.wustl.edu	37	11	14278226	14278226	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000310358	+1	known	p.E432*	1.000	198	0%	373	21.4%	12	0%	-	-	-	NULL
COPB1	1315	genome.wustl.edu	37	11	14502640	14502640	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144061.1	-1	reviewed	p.L321M	1.000	125	0%	143	35.7%	40	65%	benign(0.093)	tolerated(0.21)	neutral(0.051)	HMMPfam_Adaptin_N,superfamily_ARM-type_fold
PDE3B	5140	genome.wustl.edu	37	11	14808123	14808123	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000922.3	+1	validated	p.F390	1.000	238	0%	142	28.9%	0	-	-	-	-	NULL
PDE3B	5140	genome.wustl.edu	37	11	14889224	14889224	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000922.3	+1	validated	p.N1020T	0.974	283	0%	446	34.3%	1	0%	benign(0)	tolerated(0.05)	neutral(0.345)	HMMPfam_PDEase_I,superfamily_HD-domain/PDEase-like
CYP2R1	120227	genome.wustl.edu	37	11	14899829	14899829	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024514.4	-1	reviewed	p.L449I	1.000	186	0%	117	35.9%	29	51.7%	probably_damaging(0.976)	tolerated(0.12)	deleterious(0.678)	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450
INSC	387755	genome.wustl.edu	37	11	15262015	15262015	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031853.3	+1	provisional	p.L519	1.000	167	0%	132	40.9%	0	-	-	-	-	HMMSmart_SM00185,superfamily_ARM repeat
SOX6	55553	genome.wustl.edu	37	11	16010674	16010674	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033326.3	-1	reviewed	p.R592H	1.000	169	0%	152	35.5%	0	-	probably_damaging(0.961)	deleterious(0)	deleterious(0.849)	superfamily_HMG-box
C11orf58	10944	genome.wustl.edu	37	11	16774348	16774348	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014267.5	+1	validated	p.K75N	1.000	154	0%	272	34.6%	195	47.6%	probably_damaging(0.991)	tolerated(0.1)	deleterious(0.730)	NULL
PIK3C2A	5286	genome.wustl.edu	37	11	17132027	17132027	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002645.2	-1	validated	p.D1166Y	1.000	222	0%	412	28.4%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,superfamily_Protein kinase-like (PK-like)
PIK3C2A	5286	genome.wustl.edu	37	11	17172170	17172170	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002645.2	-1	validated	p.R401H	0.000	294	0%	431	24.6%	3	33.3%	benign(0.005)	tolerated(0.21)	neutral(0.044)	superfamily_Ubiquitin-like
PIK3C2A	5286	genome.wustl.edu	37	11	17191191	17191191	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002645.2	-1	validated	p.Q33P	1.000	207	0%	433	30.9%	2	50%	possibly_damaging(0.951)	deleterious(0.01)	deleterious(0.800)	NULL
KCNC1	3746	genome.wustl.edu	37	11	17793324	17793324	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001112741.1	+1	reviewed	p.R228H	0.988	253	0%	386	36.3%	0	-	benign(0.222)	tolerated(0.27)	neutral(0.056)	superfamily_Voltage-gated potassium channels
KCNC1	3746	genome.wustl.edu	37	11	17793473	17793473	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001112741.1	+1	reviewed	p.L278I	0.927	212	0%	306	35.9%	0	-	probably_damaging(0.99)	tolerated(0.09)	deleterious(0.738)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
KCNC1	3746	genome.wustl.edu	37	11	17801027	17801027	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001112741.1	+1	reviewed	p.A510V	1.000	74	0%	90	22.2%	0	-	benign(0.001)	deleterious(0.02)	neutral(0.383)	NULL
TPH1	7166	genome.wustl.edu	37	11	18042711	18042711	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004179.2	-1	reviewed	p.E388*	1.000	201	0%	232	31%	0	-	-	-	-	HMMPfam_Biopterin_H,superfamily_Aromatic aminoacid monoxygenases catalytic and oligomerization domains
MRGPRX4	117196	genome.wustl.edu	37	11	18194805	18194805	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_054032.3	+1	validated	p.M1T	0.008	96	0%	170	30.6%	0	-	benign(0.296)	deleterious(0)	deleterious(0.536)	NULL
MRGPRX4	117196	genome.wustl.edu	37	11	18194853	18194853	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_054032.3	+1	validated	p.G17V	0.000	120	0%	240	28.7%	0	-	benign(0.003)	tolerated(0.37)	neutral(0.019)	NULL
ENSG00000189332	0	genome.wustl.edu	37	11	18231290	18231290	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000340135	+1	known	p.E26K	0.009	51	0%	74	23%	0	-	benign(0.017)	tolerated(0.33)	neutral(0.025)	NULL
ENSG00000189332	0	genome.wustl.edu	37	11	18231482	18231482	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000340135	+1	known	p.R90W	0.999	69	0%	141	31.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Mitochondrial carrier
HPS5	11234	genome.wustl.edu	37	11	18318408	18318408	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181507.1	-1	reviewed	p.E483*	1.000	73	0%	130	36.9%	2	50%	-	-	-	NULL
LDHAL6A	160287	genome.wustl.edu	37	11	18487239	18487239	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144071.1	+1	validated	p.Q100H	0.858	168	0%	303	30.7%	2	100%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_Ldh_1_N,superfamily_NAD(P)-bd
TSG101	7251	genome.wustl.edu	37	11	18541149	18541149	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006292.2	-1	reviewed	p.Y15C	1.000	122	0%	188	39.9%	27	48.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_UBC-like
UEVLD	55293	genome.wustl.edu	37	11	18568443	18568443	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040697.1	-1	validated	p.L290	0.518	125	0%	243	31.7%	6	33.3%	-	-	-	HMMPfam_Ldh_1_N,superfamily_NAD(P)-binding Rossmann-fold domains
SPTY2D1	144108	genome.wustl.edu	37	11	18636920	18636920	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194285.2	-1	validated	p.R301S	0.009	73	0%	156	35.3%	11	72.7%	benign(0.325)	tolerated(0.58)	neutral(0.107)	NULL
IGSF22	283284	genome.wustl.edu	37	11	18740216	18740216	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173588.3	-1	validated	p.V252	0.023	191	0.5%	333	34.8%	0	-	-	-	-	HMMSmart_IG,HMMPfam_I-set,superfamily_SSF48726
PTPN5	84867	genome.wustl.edu	37	11	18763930	18763930	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006906.1	-1	validated	p.E202K	0.979	107	0%	83	38.6%	0	-	possibly_damaging(0.8)	deleterious(0.05)	deleterious(0.646)	NULL
MRGPRX1	259249	genome.wustl.edu	37	11	18956062	18956062	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_147199.3	-1	provisional	p.I90	0.000	159	0%	303	18.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
MRGPRX1	259249	genome.wustl.edu	37	11	18956211	18956211	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000433222	-1	known	e2-1	0.179	216	0%	330	28.2%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	-
MRGPRX2	117194	genome.wustl.edu	37	11	19077883	19077883	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_054030.2	-1	provisional	p.L23I	0.000	52	0%	68	27.9%	0	-	benign(0)	tolerated(0.4)	neutral(0.016)	superfamily_SSF81321
E2F8	79733	genome.wustl.edu	37	11	19259673	19259673	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024680.2	-1	validated	p.L8I	1.000	119	0%	141	28.4%	0	-	benign(0.288)	tolerated(1)	neutral(0.088)	NULL
NAV2	89797	genome.wustl.edu	37	11	19914112	19914112	+	Silent	SNP	A	A	G	rs140502141		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182964.5	+1	validated	p.P301	0.631	134	0%	174	29.3%	1	0%	-	-	-	NULL
NAV2	89797	genome.wustl.edu	37	11	19955393	19955393	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182964.5	+1	validated	p.K535Q	1.000	77	0%	157	41.4%	0	-	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	NULL
NAV2	89797	genome.wustl.edu	37	11	20066886	20066886	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182964.5	+1	validated	p.R1191Q	1.000	84	0%	112	33.9%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
NAV2	89797	genome.wustl.edu	37	11	20119198	20119198	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182964.5	+1	validated	p.E2033*	1.000	121	0%	168	29.8%	8	25%	-	-	-	NULL
HTATIP2	10553	genome.wustl.edu	37	11	20404712	20404712	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098520.1	+1	validated	p.I264	0.468	111	0%	169	32.5%	107	42%	-	-	-	NULL
SLC6A5	9152	genome.wustl.edu	37	11	20636242	20636242	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004211.3	+1	reviewed	p.D335Y	1.000	163	0%	237	34.6%	0	-	benign(0.002)	deleterious(0.03)	neutral(0.364)	HMMPfam_SNF
SLC6A5	9152	genome.wustl.edu	37	11	20639313	20639313	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004211.3	+1	reviewed	p.K381N	1.000	281	0%	357	22.4%	0	-	benign(0.001)	tolerated(0.22)	neutral(0.042)	HMMPfam_SNF
SLC6A5	9152	genome.wustl.edu	37	11	20648305	20648305	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004211.3	+1	reviewed	p.I438V	1.000	155	0%	167	33.5%	0	-	benign(0.006)	tolerated(0.56)	neutral(0.006)	HMMPfam_SNF
NELL1	4745	genome.wustl.edu	37	11	20949977	20949977	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006157.3	+1	reviewed	p.D317Y	1.000	270	0%	293	31.7%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMSmart_SM00215
NELL1	4745	genome.wustl.edu	37	11	21592479	21592479	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006157.3	+1	reviewed	p.R717Q	0.998	209	0%	113	36.3%	0	-	benign(0.419)	tolerated(0.42)	neutral(0.150)	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMSmart_SM00215
ANO5	203859	genome.wustl.edu	37	11	22257748	22257748	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_213599.2	+1	reviewed	p.D230Y	1.000	351	0%	292	33.2%	0	-	possibly_damaging(0.921)	deleterious(0.01)	deleterious(0.776)	NULL
ANO5	203859	genome.wustl.edu	37	11	22257756	22257756	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_213599.2	+1	reviewed	p.K232N	1.000	355	0%	272	32%	0	-	probably_damaging(0.986)	tolerated(0.45)	neutral(0.447)	NULL
ANO5	203859	genome.wustl.edu	37	11	22294372	22294372	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_213599.2	+1	reviewed	p.P691H	1.000	358	0%	419	32.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF590
SVIP	258010	genome.wustl.edu	37	11	22848789	22848789	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148893.1	-1	provisional	p.I61	0.028	86	0%	68	19.1%	54	42.5%	-	-	-	NULL
ANO3	63982	genome.wustl.edu	37	11	26529757	26529757	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031418.2	+1	validated	p.R180I	1.000	158	0%	171	34.5%	0	-	possibly_damaging(0.887)	deleterious(0)	deleterious(0.791)	NULL
ANO3	63982	genome.wustl.edu	37	11	26621235	26621235	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031418.2	+1	validated	p.F604V	1.000	417	0.2%	459	32.5%	0	-	probably_damaging(0.986)	tolerated(0.07)	deleterious(0.754)	NULL
ANO3	63982	genome.wustl.edu	37	11	26681908	26681908	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031418.2	+1	validated	p.E955*	1.000	127	0%	108	50%	0	-	-	-	-	NULL
SLC5A12	159963	genome.wustl.edu	37	11	26725356	26725356	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178498.3	-1	validated	p.R222*	1.000	222	0%	172	33.7%	4	0%	-	-	-	NULL
CCDC34	91057	genome.wustl.edu	37	11	27360432	27360432	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030771.1	-1	validated	p.S353Y	0.054	240	0.4%	331	31.7%	24	54.1%	possibly_damaging(0.745)	deleterious(0.04)	deleterious(0.623)	NULL
CCDC34	91057	genome.wustl.edu	37	11	27371811	27371811	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080654.2	-1	validated	p.S225*	0.000	378	0%	424	23.1%	1	0%	-	-	-	NULL
KIF18A	81930	genome.wustl.edu	37	11	28058076	28058076	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031217.3	-1	validated	p.S695Y	1.000	159	0%	96	44.8%	8	50%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	NULL
MPPED2	744	genome.wustl.edu	37	11	30557586	30557586	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001584.2	-1	reviewed	p.E89K	1.000	144	0%	131	35.9%	4	75%	possibly_damaging(0.952)	tolerated(0.87)	neutral(0.396)	HMMPfam_Metallophos,superfamily_Metallo-dependent phosphatases
ENSG00000226746	0	genome.wustl.edu	37	11	30974051	30974051	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000399333	-1	known	p.P505S	1.000	403	0%	409	29.8%	0	-	-	-	-	NULL
ENSG00000226746	0	genome.wustl.edu	37	11	31115678	31115678	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000399333	-1	known	p.F298L	0.011	121	0%	117	35.9%	0	-	-	-	-	NULL
EIF3M	10480	genome.wustl.edu	37	11	32622377	32622377	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006360.3	+1	provisional	p.D314	1.000	174	0%	218	32.1%	376	38.8%	-	-	-	"HMMPfam_PCI,HMMSmart_SM00088,superfamily_""Winged helix"" DNA-binding domain"
CCDC73	493860	genome.wustl.edu	37	11	32675584	32675584	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008391.2	-1	validated	e10-1	1.000	172	0%	144	33.3%	0	-	-	-	-	-
CCDC73	493860	genome.wustl.edu	37	11	32697145	32697145	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008391.2	-1	validated	p.K204T	1.000	114	0%	92	31.5%	0	-	possibly_damaging(0.527)	tolerated(0.13)	neutral(0.430)	NULL
CCDC73	493860	genome.wustl.edu	37	11	32697466	32697466	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008391.2	-1	validated	p.L177	0.997	373	0%	420	37.9%	0	-	-	-	-	NULL
CCDC73	493860	genome.wustl.edu	37	11	32720808	32720808	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008391.2	-1	validated	p.K127Q	1.000	464	0%	617	24.8%	0	-	probably_damaging(1)	tolerated(0.3)	deleterious(0.528)	NULL
QSER1	79832	genome.wustl.edu	37	11	32955694	32955694	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001076786.1	+1	provisional	p.F835V	1.000	67	0%	97	41.2%	3	33.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
QSER1	79832	genome.wustl.edu	37	11	32956714	32956714	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001076786.1	+1	provisional	p.R1175	1.000	129	0%	102	25.5%	4	100%	-	-	-	NULL
CSTF3	1479	genome.wustl.edu	37	11	33123747	33123747	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001326.2	-1	reviewed	p.D268N	1.000	305	0%	318	25.8%	9	33.3%	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	superfamily_TPR-like
C11orf41	25758	genome.wustl.edu	37	11	33566801	33566801	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012194.1	+1	validated	p.P797T	0.789	99	0%	139	43.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CD59	966	genome.wustl.edu	37	11	33731685	33731685	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000611.5	-1	reviewed	p.S125N	0.000	135	0%	156	29.5%	300	30.6%	benign(0.189)	tolerated(0.25)	neutral(0.054)	NULL
CD59	966	genome.wustl.edu	37	11	33731839	33731839	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000611.5	-1	reviewed	p.D74N	0.000	171	0%	244	30.7%	288	27.4%	benign(0.002)	tolerated(0.35)	neutral(0.021)	HMMPfam_UPAR_LY6,HMMSmart_SM00134,superfamily_Snake toxin-like
FBXO3	26273	genome.wustl.edu	37	11	33777332	33777332	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012175.3	-1	reviewed	p.V221	1.000	129	0%	181	29.8%	19	52.6%	-	-	-	HMMPfam_SMI1_KNR4
FBXO3	26273	genome.wustl.edu	37	11	33790506	33790506	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012175.3	-1	reviewed	p.Y83	0.994	255	0%	360	33.3%	10	30%	-	-	-	superfamily_F-box domain
NAT10	55226	genome.wustl.edu	37	11	34154639	34154639	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024662.2	+1	validated	p.P562S	1.000	267	0%	567	31.6%	23	34.7%	possibly_damaging(0.893)	deleterious(0.04)	deleterious(0.701)	NULL
ABTB2	25841	genome.wustl.edu	37	11	34184250	34184250	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145804.1	-1	provisional	p.S511	0.208	30	0%	35	42.9%	3	33.3%	-	-	-	superfamily_ANK
ABTB2	25841	genome.wustl.edu	37	11	34378308	34378308	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145804.1	-1	provisional	p.A89T	1.000	33	0%	49	40.8%	6	16.6%	possibly_damaging(0.804)	deleterious(0.01)	deleterious(0.708)	superfamily_Histone-fold
ELF5	2001	genome.wustl.edu	37	11	34502381	34502381	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198381.1	-1	reviewed	p.K213N	1.000	372	0%	446	37%	0	-	possibly_damaging(0.913)	tolerated(0.07)	deleterious(0.683)	"HMMPfam_Ets,HMMSmart_SM00413,superfamily_""Winged helix"" DNA-binding domain"
PDHX	8050	genome.wustl.edu	37	11	34991821	34991821	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003477.2	+1	reviewed	p.D318Y	0.998	178	0%	192	29.2%	16	50%	benign(0.072)	tolerated(0.09)	neutral(0.301)	HMMPfam_2-oxoacid_dh,superfamily_SSF52777
PDHX	8050	genome.wustl.edu	37	11	35006231	35006231	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003477.2	+1	reviewed	p.D380Y	1.000	175	0%	186	28.5%	26	30.7%	possibly_damaging(0.822)	deleterious(0)	deleterious(0.756)	HMMPfam_2-oxoacid_dh,superfamily_SSF52777
CD44	960	genome.wustl.edu	37	11	35198121	35198121	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000610.3	+1	reviewed	e2-1	0.977	61	0%	62	25.8%	0	-	-	-	-	-
PAMR1	25891	genome.wustl.edu	37	11	35454063	35454063	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015430.2	-1	validated	p.I685	0.971	69	0%	101	36.6%	28	0%	-	-	-	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
LDLRAD3	143458	genome.wustl.edu	37	11	36057774	36057774	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174902.2	+1	provisional	p.F56	0.994	126	0%	159	34%	8	37.5%	-	-	-	HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_LDL_rcpt_classA_cys-rich
RAG1	5896	genome.wustl.edu	37	11	36597696	36597696	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000448.2	+1	reviewed	p.E948*	1.000	156	0%	234	34.2%	0	-	-	-	-	NULL
RAG2	5897	genome.wustl.edu	37	11	36614907	36614907	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000536.3	-1	reviewed	p.F271C	1.000	126	0%	153	35.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RAG2
LRRC4C	57689	genome.wustl.edu	37	11	40136642	40136642	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020929.1	-1	validated	p.V401M	1.000	127	0%	169	34.9%	0	-	benign(0.054)	tolerated(0.1)	neutral(0.290)	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
LRRC4C	57689	genome.wustl.edu	37	11	40137423	40137423	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020929.1	-1	validated	p.P140	0.001	101	1%	128	33.6%	2	100%	-	-	-	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like
API5	8539	genome.wustl.edu	37	11	43342374	43342374	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142930.1	+1	validated	p.R79*	1.000	196	0%	298	35.6%	12	16.6%	-	-	-	HMMPfam_API5,superfamily_ARM-type_fold
ENSG00000246250	0	genome.wustl.edu	37	11	43852284	43852284	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000499066	-1	known	NULL	0.985	14	0%	30	40%	0	-	-	-	-	-
ACCSL	390110	genome.wustl.edu	37	11	44070018	44070018	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031854.2	+1	validated	p.V144	0.000	77	0%	90	23.3%	0	-	-	-	-	superfamily_PLP-dependent transferases
EXT2	2132	genome.wustl.edu	37	11	44130751	44130751	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000401.3	+1	reviewed	p.R195*	1.000	138	0%	152	31.6%	34	2.9%	-	-	-	HMMPfam_Exostosin
GYLTL1B	120071	genome.wustl.edu	37	11	45948049	45948049	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152312.3	+1	validated	p.F355L	1.000	144	0%	281	37.4%	95	53.6%	benign(0.001)	tolerated(0.26)	neutral(0.034)	superfamily_Nucleotide-diphospho-sugar transferases
PHF21A	51317	genome.wustl.edu	37	11	45987025	45987025	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001101802.1	-1	validated	p.Q278H	1.000	152	0%	284	37.3%	21	23.8%	probably_damaging(0.97)	deleterious(0.03)	deleterious(0.777)	NULL
ARHGAP1	392	genome.wustl.edu	37	11	46700685	46700685	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004308.2	-1	provisional	p.I408V	1.000	148	0%	360	30%	77	36.3%	benign(0.001)	tolerated(1)	-	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP
ARHGAP1	392	genome.wustl.edu	37	11	46702650	46702650	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004308.2	-1	provisional	p.F182	1.000	175	0%	299	31.1%	30	26.6%	-	-	-	HMMSmart_SEC14,superfamily_CRAL_TRIO_C
CKAP5	9793	genome.wustl.edu	37	11	46771888	46771888	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008938.1	-1	validated	p.V1880	0.999	177	0%	365	31.2%	73	32.8%	-	-	-	NULL
CKAP5	9793	genome.wustl.edu	37	11	46774960	46774960	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008938.1	-1	validated	p.S1653A	0.992	121	0%	220	31.4%	60	48.3%	benign(0.003)	tolerated(0.74)	neutral(0.002)	NULL
CKAP5	9793	genome.wustl.edu	37	11	46776498	46776498	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008938.1	-1	validated	p.E1603D	1.000	185	0.5%	405	30.9%	70	45.7%	benign(0.001)	tolerated(0.48)	neutral(0.011)	NULL
LRP4	4038	genome.wustl.edu	37	11	46911963	46911963	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002334.3	-1	reviewed	p.D594N	1.000	48	0%	64	34.4%	9	11.1%	benign(0.043)	tolerated(0.23)	neutral(0.044)	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,superfamily_YWTD domain
MADD	8567	genome.wustl.edu	37	11	47331089	47331089	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003682.3	+1	reviewed	p.R1362C	1.000	127	0%	301	38.5%	22	22.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MADD	8567	genome.wustl.edu	37	11	47345343	47345343	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003682.3	+1	reviewed	p.R1500I	1.000	112	0%	277	37.9%	33	45.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SLC39A13	91252	genome.wustl.edu	37	11	47436905	47436905	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128225.2	+1	reviewed	p.F369	0.000	131	0%	244	33.2%	55	23.6%	-	-	-	NULL
RAPSN	5913	genome.wustl.edu	37	11	47464266	47464266	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005055.3	-1	reviewed	p.H211R	1.000	59	0%	83	39.8%	1	0%	possibly_damaging(0.733)	tolerated(0.59)	neutral(0.273)	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
LOC100289572	100289572	genome.wustl.edu	37	11	47470718	47470718	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343082.1	+1	model	p.A275T	1.000	7	0.000	19	0.526	1	100%	-	-	-	NULL
CELF1	10658	genome.wustl.edu	37	11	47494692	47494692	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025596.2	-1	reviewed	p.V427	0.998	77	0%	182	38.5%	29	24.1%	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
AGBL2	79841	genome.wustl.edu	37	11	47707579	47707579	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024783.2	-1	validated	p.L552M	0.991	145	0.7%	250	30.4%	0	-	benign(0.429)	tolerated(0.1)	neutral(0.426)	HMMPfam_Peptidase_M14,superfamily_Zn-dependent exopeptidases
FNBP4	23360	genome.wustl.edu	37	11	47765580	47765580	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015308.2	-1	validated	p.R461*	1.000	175	0%	369	11.7%	20	15%	-	-	-	NULL
NUP160	23279	genome.wustl.edu	37	11	47833884	47833884	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015231.1	-1	validated	p.E684*	0.992	333	0%	658	30.5%	5	0%	-	-	-	NULL
NUP160	23279	genome.wustl.edu	37	11	47861855	47861855	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000458312	-1	known	p.C166	0.000	62	0%	127	30.7%	0	-	-	-	-	NULL
PTPRJ	5795	genome.wustl.edu	37	11	48177584	48177584	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002843.3	+1	reviewed	p.P1117	0.996	128	0%	230	27.4%	7	28.5%	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
OR4X2	119764	genome.wustl.edu	37	11	48267317	48267317	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004727.1	+1	provisional	p.S221I	0.000	177	0%	244	41%	0	-	possibly_damaging(0.882)	deleterious(0.03)	deleterious(0.709)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4C45	403257	genome.wustl.edu	37	11	48373937	48373937	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000415304	-1	known	p.F21L	0.605	365	0%	552	15.4%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
LOC283116	283116	genome.wustl.edu	37	11	49053375	49053375	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_208043.4	+1	model	p.S75Y	0.024	175	0%	225	32.4%	0	-	possibly_damaging(0.839)	tolerated(0.12)	deleterious(0.581)	superfamily_SSF57850
LOC283116	283116	genome.wustl.edu	37	11	49056656	49056656	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_208043.4	+1	model	p.D250Y	0.026	199	0%	198	24.2%	0	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
LOC283116	283116	genome.wustl.edu	37	11	49059070	49059070	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_208043.4	+1	model	p.I300	0.000	97	0%	117	36.8%	0	-	-	-	-	NULL
LOC646754	646754	genome.wustl.edu	37	11	49078870	49078870	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_929704.3	-1	model	p.L190F	0.005	194	0%	247	27.5%	0	-	probably_damaging(0.999)	tolerated(0.05)	deleterious(0.836)	NULL
FOLH1	2346	genome.wustl.edu	37	11	49192803	49192803	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004476.1	-1	reviewed	p.F418I	1.000	382	0%	370	23%	4	25%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Peptidase_M28,superfamily_Zn-dependent exopeptidases
OR4C13	283092	genome.wustl.edu	37	11	49974330	49974330	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001955.2	+1	validated	p.D119G	1.000	202	0%	192	24%	0	-	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_7tm_1,superfamily_SSF81321
OR4C12	283093	genome.wustl.edu	37	11	50003294	50003294	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005270.2	-1	validated	p.F248L	0.000	161	1.2%	154	32.5%	0	-	benign(0.008)	deleterious(0)	neutral(0.445)	HMMPfam_7tm_1,superfamily_SSF81321
OR4C12	283093	genome.wustl.edu	37	11	50003836	50003836	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005270.2	-1	validated	p.D68Y	0.992	130	0%	170	28.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
OR4C46	119749	genome.wustl.edu	37	11	51515359	51515359	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004703.1	+1	provisional	p.F26	0.459	356	0%	413	28.3%	0	-	-	-	-	superfamily_SSF81321
LOC440041	440041	genome.wustl.edu	37	11	55062219	55062219	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_016142.3	-1	model	NULL	0.016	58	0%	18	50%	0	-	-	-	-	-
ENSG00000166007	0	genome.wustl.edu	37	11	55062991	55062991	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000309470	-1	known	p.G217E	0.202	127	0%	48	16.7%	0	-	-	-	-	NULL
ENSG00000166007	0	genome.wustl.edu	37	11	55065531	55065531	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000309470	-1	known	p.N72I	0.065	57	0%	22	27.3%	0	-	-	-	-	superfamily_SSF57850
OR4A15	81328	genome.wustl.edu	37	11	55136168	55136168	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005275.1	+1	provisional	p.S270Y	0.960	402	0%	302	29.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
ENSG00000181943	0	genome.wustl.edu	37	11	55259401	55259401	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000314657	+1	known	p.H228R	0.925	96	0%	60	21.7%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4C15	81309	genome.wustl.edu	37	11	55322463	55322463	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001920.1	+1	provisional	p.I227	0.001	203	0%	218	18.3%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4C11	219429	genome.wustl.edu	37	11	55371310	55371310	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004700.1	-1	provisional	p.Q180	0.996	71	0%	55	32.7%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR4C11	219429	genome.wustl.edu	37	11	55371648	55371648	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004700.1	-1	provisional	p.D68N	0.528	108	0%	99	29.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
OR4P4	81300	genome.wustl.edu	37	11	55405844	55405844	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004124.1	+1	provisional	p.S4I	0.000	149	0%	137	28.5%	0	-	benign(0.002)	tolerated(0.23)	neutral(0.042)	superfamily_SSF81321
OR4P4	81300	genome.wustl.edu	37	11	55406480	55406480	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004124.1	+1	provisional	p.Y216S	0.682	240	0.4%	299	41.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_SSF81321
OR4P4	81300	genome.wustl.edu	37	11	55406513	55406513	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004124.1	+1	provisional	p.S227Y	0.040	260	0%	345	27.5%	0	-	benign(0.003)	deleterious(0)	neutral(0.445)	HMMPfam_7tm_1,superfamily_SSF81321
OR4S2	219431	genome.wustl.edu	37	11	55419140	55419140	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004059.2	+1	validated	p.F254C	0.972	213	0%	153	31.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4S2	219431	genome.wustl.edu	37	11	55419308	55419308	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004059.2	+1	validated	p.G310V	0.000	47	0%	27	51.9%	0	-	benign(0.009)	deleterious(0.04)	neutral(0.349)	NULL
OR4C6	219432	genome.wustl.edu	37	11	55433159	55433159	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004704.1	+1	provisional	p.D173Y	0.200	118	0%	141	25.5%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR5D14	219436	genome.wustl.edu	37	11	55563568	55563568	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004735.1	+1	provisional	p.F179L	0.373	285	0%	307	27%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
OR5D14	219436	genome.wustl.edu	37	11	55563701	55563701	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004735.1	+1	provisional	p.F224V	0.023	242	0%	281	32.4%	0	-	benign(0)	tolerated(0.67)	neutral(0.003)	HMMPfam_7tm_1,superfamily_SSF81321
OR5D18	219438	genome.wustl.edu	37	11	55587411	55587411	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001952.1	+1	provisional	p.F102L	0.114	263	0%	435	39.5%	0	-	benign(0.085)	tolerated(0.46)	neutral(0.018)	HMMPfam_7tm_1,superfamily_SSF81321
OR5D18	219438	genome.wustl.edu	37	11	55587651	55587651	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001952.1	+1	provisional	p.F182L	0.025	273	0%	346	32.7%	0	-	benign(0)	tolerated(1)	-	HMMPfam_7tm_1,superfamily_SSF81321
OR5D16	390144	genome.wustl.edu	37	11	55606553	55606553	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005496.1	+1	provisional	p.F109C	0.506	194	0%	204	40.2%	0	-	benign(0.111)	tolerated(0.08)	neutral(0.308)	HMMPfam_7tm_1,superfamily_SSF81321
OR5I1	10798	genome.wustl.edu	37	11	55703649	55703649	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006637.1	-1	reviewed	p.F76L	0.012	76	0%	37	45.9%	0	-	benign(0)	deleterious(0)	neutral(0.445)	HMMPfam_7tm_1,superfamily_SSF81321
OR10AG1	282770	genome.wustl.edu	37	11	55735481	55735481	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005491.1	-1	provisional	p.Q153	0.001	168	0%	174	28.2%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR5F1	338674	genome.wustl.edu	37	11	55761422	55761422	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003697.1	-1	provisional	p.S227Y	0.000	69	0%	66	28.8%	0	-	benign(0.082)	deleterious(0)	neutral(0.451)	HMMPfam_7tm_1,superfamily_SSF81321
OR8H2	390151	genome.wustl.edu	37	11	55873329	55873329	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005200.1	+1	provisional	p.D271N	0.002	208	0%	151	23.8%	0	-	benign(0.029)	tolerated(0.14)	neutral(0.251)	HMMPfam_7tm_1,superfamily_SSF81321
OR8H3	390152	genome.wustl.edu	37	11	55890562	55890562	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005201.1	+1	provisional	p.F238L	0.996	311	0%	307	34.9%	0	-	benign(0.012)	tolerated(0.08)	neutral(0.300)	HMMPfam_7tm_1,superfamily_SSF81321
OR5J2	282775	genome.wustl.edu	37	11	55945009	55945009	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005492.1	+1	provisional	p.E306*	0.845	118	0%	141	35.5%	0	-	-	-	-	superfamily_SSF81321
OR5T3	390154	genome.wustl.edu	37	11	56019826	56019826	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004747.1	+1	provisional	p.F51V	0.000	260	0%	216	37%	0	-	benign(0.001)	tolerated(0.09)	neutral(0.296)	superfamily_SSF81321
OR5T3	390154	genome.wustl.edu	37	11	56019988	56019988	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004747.1	+1	provisional	p.T105A	0.011	225	0%	198	32.8%	0	-	possibly_damaging(0.573)	deleterious(0)	deleterious(0.641)	HMMPfam_7tm_1,superfamily_SSF81321
OR5T1	390155	genome.wustl.edu	37	11	56043510	56043510	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004745.1	+1	provisional	p.Y132	0.980	283	0%	326	29.4%	0	-	-	-	-	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
OR8K3	219473	genome.wustl.edu	37	11	56086458	56086458	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005202.1	+1	provisional	p.L226I	0.020	251	0%	250	30.4%	0	-	benign(0.041)	tolerated(0.05)	neutral(0.348)	HMMPfam_7tm_1,superfamily_SSF81321
OR8K1	390157	genome.wustl.edu	37	11	56113810	56113810	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002907.1	+1	provisional	p.S99Y	0.996	182	0%	225	33.3%	0	-	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_7tm_1,superfamily_SSF81321
OR8K1	390157	genome.wustl.edu	37	11	56113962	56113962	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002907.1	+1	provisional	p.L150M	0.051	289	0%	401	32.7%	0	-	probably_damaging(0.999)	tolerated(0.12)	deleterious(0.751)	HMMPfam_7tm_1,superfamily_SSF81321
OR8J1	219477	genome.wustl.edu	37	11	56128034	56128034	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005205.1	+1	provisional	p.F104L	0.970	393	0%	429	33.1%	0	-	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR8U1	219417	genome.wustl.edu	37	11	56143825	56143825	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005204.1	+1	provisional	p.G242	0.021	212	0%	155	26.5%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR8U1	219417	genome.wustl.edu	37	11	56143844	56143844	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005204.1	+1	provisional	p.T249A	0.001	189	0%	132	28.8%	0	-	benign(0.318)	tolerated(0.25)	neutral(0.137)	HMMPfam_7tm_1,superfamily_SSF81321
OR5M3	219482	genome.wustl.edu	37	11	56237799	56237799	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004742.1	-1	provisional	p.F59V	1.000	152	0%	141	33.3%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR5M11	219487	genome.wustl.edu	37	11	56310243	56310243	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005245.1	-1	provisional	p.R164H	0.000	55	0%	42	40.5%	1	100%	benign(0.012)	tolerated(0.19)	neutral(0.050)	HMMPfam_7tm_1,superfamily_SSF81321
OR5M1	390168	genome.wustl.edu	37	11	56380184	56380184	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004740.1	-1	provisional	p.E265D	0.001	245	0%	234	29.5%	0	-	benign(0)	tolerated(0.18)	neutral(0.056)	HMMPfam_7tm_1,superfamily_SSF81321
OR5M1	390168	genome.wustl.edu	37	11	56380880	56380880	+	Silent	SNP	C	C	T	rs186105577	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004740.1	-1	provisional	p.A33	0.028	302	0%	336	29.8%	0	-	-	-	-	superfamily_SSF81321
OR5AP2	338675	genome.wustl.edu	37	11	56409867	56409867	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002925.1	-1	provisional	p.E17*	0.318	149	0%	175	30.3%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
OR5AR1	219493	genome.wustl.edu	37	11	56431251	56431251	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004730.1	+1	provisional	p.V30	0.084	210	0%	256	33.6%	0	-	-	-	-	superfamily_SSF81321
OR5AR1	219493	genome.wustl.edu	37	11	56431324	56431324	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004730.1	+1	provisional	p.L55F	0.959	282	0.4%	342	29.8%	0	-	possibly_damaging(0.743)	deleterious(0)	deleterious(0.717)	HMMPfam_7tm_1,superfamily_SSF81321
OR5AR1	219493	genome.wustl.edu	37	11	56431692	56431692	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004730.1	+1	provisional	p.F177L	0.998	312	0%	325	30.5%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_SSF81321
OR9G1	390174	genome.wustl.edu	37	11	56467903	56467903	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005213.1	+1	provisional	p.L14	0.010	328	0%	364	19%	0	-	-	-	-	superfamily_SSF81321
OR9G1	390174	genome.wustl.edu	37	11	56468163	56468163	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005213.1	+1	provisional	p.F100L	0.999	362	0%	383	17.5%	0	-	probably_damaging(0.998)	tolerated(0.72)	deleterious(0.476)	HMMPfam_7tm_1,superfamily_SSF81321
OR9G1	390174	genome.wustl.edu	37	11	56468719	56468719	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005213.1	+1	provisional	p.L286I	0.992	278	0%	365	21.1%	0	-	benign(0)	deleterious(0)	neutral(0.445)	HMMPfam_7tm_1,superfamily_SSF81321
OR9G4	283189	genome.wustl.edu	37	11	56510749	56510749	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005284.1	-1	provisional	p.R180H	0.010	96	0%	126	30.2%	0	-	probably_damaging(0.993)	tolerated(0.17)	deleterious(0.509)	HMMPfam_7tm_1,superfamily_SSF81321
LRRC55	219527	genome.wustl.edu	37	11	56949617	56949617	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005210.2	+1	validated	p.L84I	1.000	77	0%	92	26.1%	0	-	benign(0.195)	tolerated(0.22)	neutral(0.060)	HMMPfam_LRRNT,HMMSmart_SM00013,superfamily_L domain-like
TNKS1BP1	85456	genome.wustl.edu	37	11	57077549	57077549	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033396.2	-1	validated	p.R879Q	0.000	170	0%	249	36.5%	41	29.2%	benign(0.034)	tolerated(0.17)	neutral(0.061)	NULL
TNKS1BP1	85456	genome.wustl.edu	37	11	57087724	57087724	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033396.2	-1	validated	p.R186H	1.000	79	0%	73	28.8%	25	36%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
SSRP1	6749	genome.wustl.edu	37	11	57099737	57099737	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003146.2	-1	reviewed	p.R297H	1.000	98	0%	193	37.8%	128	35.9%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_SSrecog
P2RX3	5024	genome.wustl.edu	37	11	57114597	57114597	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002559.2	+1	reviewed	p.S88L	0.999	151	0%	250	28.4%	0	-	possibly_damaging(0.909)	deleterious(0.01)	deleterious(0.768)	HMMPfam_P2X_receptor
P2RX3	5024	genome.wustl.edu	37	11	57116176	57116176	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002559.2	+1	reviewed	p.E187	0.999	93	0%	138	34.8%	0	-	-	-	-	HMMPfam_P2X_receptor
PRG3	10394	genome.wustl.edu	37	11	57147249	57147249	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006093.3	-1	validated	p.E31	0.012	121	0%	168	28.6%	0	-	-	-	-	NULL
PRG2	5553	genome.wustl.edu	37	11	57157369	57157369	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002728.4	-1	reviewed	p.L17I	0.708	137	0%	302	33.8%	1	0%	unknown(0)	tolerated(0.21)	-	NULL
SLC43A3	29015	genome.wustl.edu	37	11	57184110	57184110	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014096.2	-1	validated	p.E235D	0.001	292	0%	465	32.5%	3	0%	unknown(0)	tolerated(0.18)	-	superfamily_MFS_gen_substrate_transporter
UBE2L6	9246	genome.wustl.edu	37	11	57319963	57319963	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004223.3	-1	reviewed	p.V110	0.048	93	0%	142	35.2%	37	5.4%	-	-	-	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like
ZDHHC5	25921	genome.wustl.edu	37	11	57466162	57466162	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015457.2	+1	validated	p.F418	0.504	72	0%	82	32.9%	77	54.5%	-	-	-	NULL
TMX2	51075	genome.wustl.edu	37	11	57506465	57506465	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015959.2	+1	validated	p.N190H	1.000	242	0%	382	31.9%	75	46.6%	benign(0.001)	deleterious(0.04)	neutral(0.349)	superfamily_Thioredoxin-like,HMMPfam_Thioredoxin
CTNND1	1500	genome.wustl.edu	37	11	57559067	57559067	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001085458.1	+1	validated	p.A39	1.000	53	0%	63	28.6%	8	62.5%	-	-	-	NULL
CTNND1	1500	genome.wustl.edu	37	11	57569309	57569309	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001085458.1	+1	validated	p.R354H	1.000	52	0%	92	30.4%	56	42.8%	possibly_damaging(0.836)	tolerated(0.19)	neutral(0.369)	NULL
CTNND1	1500	genome.wustl.edu	37	11	57569590	57569590	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001085458.1	+1	validated	p.K448Q	1.000	96	0%	170	41.8%	62	51.6%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Arm,HMMSmart_SM00185,superfamily_ARM repeat
OR6Q1	219952	genome.wustl.edu	37	11	57798568	57798568	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005186.2	+1	validated	p.I48	0.005	280	0%	487	20.1%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR6Q1	219952	genome.wustl.edu	37	11	57798905	57798905	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005186.2	+1	validated	p.I161V	0.000	289	0%	410	32.2%	0	-	benign(0)	tolerated(1)	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR9Q1	219956	genome.wustl.edu	37	11	57947826	57947826	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005212.3	+1	validated	p.L304I	0.215	55	0%	67	35.8%	0	-	benign(0.344)	tolerated(0.75)	neutral(0.110)	superfamily_SSF81321
OR10Q1	219960	genome.wustl.edu	37	11	57996230	57996230	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004471.2	-1	validated	p.L40V	0.000	199	0%	411	33.1%	0	-	benign(0.001)	tolerated(0.06)	neutral(0.323)	superfamily_SSF81321
OR10W1	81341	genome.wustl.edu	37	11	58035078	58035078	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207374.3	-1	validated	p.L85F	0.000	83	0%	142	27.5%	0	-	benign(0.046)	tolerated(0.61)	neutral(0.007)	HMMPfam_7tm_1,superfamily_SSF81321
ZFP91	80829	genome.wustl.edu	37	11	58377446	58377446	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053023.3	+1	reviewed	p.R172W	0.915	89	0%	145	39.3%	8	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GLYATL1	92292	genome.wustl.edu	37	11	58711117	58711117	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080661.2	+1	provisional	p.L42	0.032	111	0%	113	38.1%	0	-	-	-	-	HMMPfam_Gly_acyl_tr_N
LOC643637	643637	genome.wustl.edu	37	11	58817685	58817685	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343101.1	+1	model	p.T166M	0.000	25	0%	27	40.7%	0	-	-	-	-	HMMPfam_Gly_acyl_tr_N,superfamily_Acyl-CoA N-acyltransferases (Nat)
FAM111B	374393	genome.wustl.edu	37	11	58892543	58892543	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198947.3	+1	validated	p.L325I	0.000	51	0%	68	33.8%	2	50%	benign(0.033)	tolerated(0.54)	neutral(0.009)	NULL
FAM111A	63901	genome.wustl.edu	37	11	58919492	58919492	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142519.1	+1	validated	p.E117D	0.000	126	0%	147	25.2%	9	55.5%	probably_damaging(0.996)	tolerated(0.07)	deleterious(0.780)	NULL
OSBP	5007	genome.wustl.edu	37	11	59344432	59344432	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002556.2	-1	reviewed	p.G709	0.997	96	0%	198	40.9%	41	43.9%	-	-	-	HMMPfam_Oxysterol_BP
OR10V1	390201	genome.wustl.edu	37	11	59480844	59480844	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005324.1	-1	provisional	p.P159S	0.969	66	0%	96	22.9%	0	-	possibly_damaging(0.72)	tolerated(0.07)	deleterious(0.580)	HMMPfam_7tm_1,superfamily_SSF81321
GIF	2694	genome.wustl.edu	37	11	59599249	59599249	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005142.2	-1	reviewed	p.S365Y	1.000	139	0%	173	32.4%	0	-	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	NULL
TCN1	6947	genome.wustl.edu	37	11	59620489	59620489	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001062.3	-1	reviewed	p.R421C	0.002	148	0%	195	25.6%	0	-	benign(0.043)	deleterious(0.04)	neutral(0.351)	NULL
TCN1	6947	genome.wustl.edu	37	11	59630180	59630180	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001062.3	-1	reviewed	p.S92L	0.651	167	0%	139	34.5%	0	-	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	HMMPfam_Cobalamin_bind,PatternScan_ABC_TRANSPORTER_1
MS4A4A	51338	genome.wustl.edu	37	11	60064693	60064693	+	Silent	SNP	G	G	T	rs192805854	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148975.1	+1	reviewed	p.L75	0.061	160	0%	203	31%	5	0%	-	-	-	HMMPfam_CD20
MS4A6E	245802	genome.wustl.edu	37	11	60102487	60102487	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139249.2	+1	reviewed	p.R40H	0.000	353	0%	537	38.2%	0	-	benign(0.001)	tolerated(0.38)	neutral(0.018)	HMMPfam_CD20
MS4A6E	245802	genome.wustl.edu	37	11	60107343	60107343	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139249.2	+1	reviewed	p.T120I	0.005	294	0%	390	32.1%	0	-	probably_damaging(0.983)	tolerated(0.21)	deleterious(0.473)	HMMPfam_CD20
MS4A14	84689	genome.wustl.edu	37	11	60183171	60183171	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032597.3	+1	validated	p.S244P	0.000	104	0%	76	38.2%	0	-	possibly_damaging(0.526)	tolerated(0.22)	neutral(0.220)	NULL
MS4A14	84689	genome.wustl.edu	37	11	60184032	60184032	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032597.3	+1	validated	p.K531fs	0.001	-	-	-	-	-	-	-	-	-	NULL
MS4A12	54860	genome.wustl.edu	37	11	60268654	60268654	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017716.2	+1	reviewed	p.S138Y	0.351	233	0%	296	33.8%	0	-	possibly_damaging(0.929)	tolerated(1)	neutral(0.376)	HMMPfam_CD20
MS4A13	503497	genome.wustl.edu	37	11	60285568	60285568	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012417.2	+1	validated	p.I4	0.733	285	0%	340	35.6%	0	-	-	-	-	HMMPfam_CD20
MS4A13	503497	genome.wustl.edu	37	11	60285684	60285684	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012417.2	+1	validated	p.F43C	0.030	253	0%	328	34.5%	0	-	possibly_damaging(0.523)	tolerated(0.15)	neutral(0.417)	HMMPfam_CD20
MS4A13	503497	genome.wustl.edu	37	11	60292771	60292771	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012417.2	+1	validated	p.S93Y	0.041	76	0%	91	29.7%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_CD20
MS4A13	503497	genome.wustl.edu	37	11	60296837	60296837	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012417.2	+1	validated	e4-1	1.000	301	0.3%	350	36.9%	0	-	-	-	-	-
MS4A10	341116	genome.wustl.edu	37	11	60558482	60558482	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206893.3	+1	validated	p.V73	0.000	174	0%	268	31.7%	0	-	-	-	-	HMMPfam_CD20
CCDC86	79080	genome.wustl.edu	37	11	60609796	60609796	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024098.3	+1	validated	p.P67S	0.036	23	0%	25	44%	26	57.6%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	NULL
TMEM109	79073	genome.wustl.edu	37	11	60689269	60689269	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024092.2	+1	validated	p.K122Q	1.000	122	0%	203	30.5%	91	37.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
PGA5	5222	genome.wustl.edu	37	11	61017450	61017450	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014224.2	+1	validated	p.V327	0.000	214	0%	298	34.2%	0	-	-	-	-	HMMPfam_Asp,superfamily_Pept_Aspartic
DDB1	1642	genome.wustl.edu	37	11	61094320	61094320	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001923.3	-1	validated	p.E199*	1.000	158	0%	272	33.1%	26	0%	-	-	-	NULL
DAK	26007	genome.wustl.edu	37	11	61111618	61111618	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015533.3	+1	reviewed	p.S371	0.000	28	0%	57	38.6%	38	52.6%	-	-	-	superfamily_Citrobacter dihydroxyacetone kinase extra ATP-binding domain
FADS2	9415	genome.wustl.edu	37	11	61624518	61624518	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004265.2	+1	reviewed	p.N260	1.000	130	0%	210	35.7%	264	51.5%	-	-	-	HMMPfam_FA_desaturase
SCGB2A2	4250	genome.wustl.edu	37	11	62038354	62038354	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002411.2	+1	provisional	p.G19	0.894	130	0%	203	30%	154	41.5%	-	-	-	HMMPfam_Uteroglobin
SCGB1A1	7356	genome.wustl.edu	37	11	62189860	62189860	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003357.4	+1	reviewed	p.E75*	0.000	119	0.8%	299	24.1%	1	100%	-	-	-	HMMPfam_Uteroglobin,HMMSmart_SM00096,superfamily_Uteroglobin-like
AHNAK	79026	genome.wustl.edu	37	11	62286994	62286994	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001620.1	-1	validated	p.I4965	0.003	74	0%	148	35.1%	36	11.1%	-	-	-	NULL
AHNAK	79026	genome.wustl.edu	37	11	62291517	62291517	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001620.1	-1	validated	p.L3458I	0.076	144	0%	249	32.1%	7	14.2%	possibly_damaging(0.882)	tolerated(1)	neutral(0.344)	NULL
AHNAK	79026	genome.wustl.edu	37	11	62292230	62292230	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001620.1	-1	validated	p.S3220*	0.998	226	0%	383	23.5%	8	0%	-	-	-	NULL
AHNAK	79026	genome.wustl.edu	37	11	62292693	62292693	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001620.1	-1	validated	p.N3066D	0.006	253	0%	383	24%	6	16.6%	benign(0.362)	tolerated(0.36)	neutral(0.135)	HMMPfam_CheC
AHNAK	79026	genome.wustl.edu	37	11	62294255	62294255	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001620.1	-1	validated	p.K2545R	0.142	240	0%	466	33.5%	5	20%	possibly_damaging(0.646)	tolerated(0.17)	neutral(0.285)	HMMPfam_CheC
AHNAK	79026	genome.wustl.edu	37	11	62298628	62298628	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001620.1	-1	validated	p.I1087	0.334	78	0%	108	36.1%	5	60%	-	-	-	NULL
EEF1G	1937	genome.wustl.edu	37	11	62338515	62338515	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001404.4	-1	reviewed	p.T148	0.777	230	0%	444	32.4%	3957	41.6%	-	-	-	HMMPfam_GST_C,superfamily_Glutathione S-transferase (GST) C-terminal domain
GANAB	23193	genome.wustl.edu	37	11	62397065	62397065	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198335.2	-1	validated	p.R632H	1.000	52	0%	76	32.9%	206	43.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_hydro_31
GANAB	23193	genome.wustl.edu	37	11	62406541	62406541	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198335.2	-1	validated	p.M98I	1.000	60	0%	128	28.9%	118	32.2%	benign(0.004)	tolerated(0.84)	neutral(0.001)	NULL
TAF6L	10629	genome.wustl.edu	37	11	62549398	62549398	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006473.2	+1	reviewed	p.K188N	1.000	119	0%	274	36.9%	19	31.5%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	NULL
SLC22A8	9376	genome.wustl.edu	37	11	62760744	62760744	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004254.3	-1	reviewed	p.L532I	1.000	129	0%	152	32.2%	0	-	possibly_damaging(0.949)	deleterious(0)	deleterious(0.838)	NULL
SLC22A8	9376	genome.wustl.edu	37	11	62760866	62760866	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000311438	-1	known	p.L516F	0.004	115	0%	155	33.5%	0	-	benign(0.002)	tolerated(0.23)	neutral(0.042)	NULL
SLC22A24	283238	genome.wustl.edu	37	11	62863494	62863494	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136506.1	-1	validated	p.R347*	0.000	111	0%	182	36.8%	0	-	-	-	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
SLC22A25	387601	genome.wustl.edu	37	11	62951230	62951230	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199352.3	-1	validated	p.K297T	0.594	456	0%	457	35%	0	-	unknown(0)	-	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
LGALS12	85329	genome.wustl.edu	37	11	63276445	63276445	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142535.1	+1	reviewed	p.F141	0.986	60	0%	123	30.9%	0	-	-	-	-	HMMPfam_Gal-bind_lectin,HMMSmart_SM00276,superfamily_Concanavalin A-like lectins/glucanases
RTN3	10313	genome.wustl.edu	37	11	63487976	63487976	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201428.1	+1	validated	p.D649Y	0.000	46	0%	103	25.2%	3	100%	possibly_damaging(0.509)	deleterious(0)	deleterious(0.615)	NULL
PYGM	5837	genome.wustl.edu	37	11	64519106	64519106	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005609.2	-1	reviewed	p.K597T	0.980	117	0%	161	34.8%	2	0%	benign(0)	tolerated(0.51)	neutral(0.009)	HMMPfam_Phosphorylase,superfamily_SSF53756
MAP4K2	5871	genome.wustl.edu	37	11	64570097	64570097	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000444560	-1	known	p.N54D	1.000	46	0%	60	31.7%	2	50%	unknown(0)	tolerated(0.29)	-	NULL
MEN1	4221	genome.wustl.edu	37	11	64572592	64572592	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000244.3	-1	reviewed	p.K427E	1.000	66	0%	132	33.3%	25	60%	possibly_damaging(0.892)	tolerated(0.35)	neutral(0.372)	HMMPfam_Menin
CDC42BPG	55561	genome.wustl.edu	37	11	64595211	64595211	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017525.2	-1	validated	p.D1338Y	1.000	53	0%	87	33.3%	25	40%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_CNH,HMMSmart_SM00036
ZNHIT2	741	genome.wustl.edu	37	11	64884276	64884276	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014205.2	-1	validated	p.R284*	0.941	15	0%	31	38.7%	49	48.9%	-	-	-	NULL
EHBP1L1	254102	genome.wustl.edu	37	11	65349715	65349715	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099409.1	+1	validated	p.E524	1.000	36	0%	71	42.3%	3	0%	-	-	-	NULL
RELA	5970	genome.wustl.edu	37	11	65429196	65429196	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021975.3	-1	validated	p.F99L	1.000	49	0%	100	23%	66	22.7%	benign(0.3)	tolerated(0.08)	neutral(0.393)	superfamily_p53-like transcription factors,HMMPfam_RHD
OVOL1	5017	genome.wustl.edu	37	11	65562187	65562187	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004561.2	+1	reviewed	p.R166Q	1.000	34	0%	51	29.4%	10	80%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
SNX32	254122	genome.wustl.edu	37	11	65620387	65620387	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152760.2	+1	validated	p.K372N	1.000	107	0%	172	34.3%	1	0%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	HMMPfam_Vps5
MUS81	80198	genome.wustl.edu	37	11	65628880	65628880	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025128.4	+1	validated	p.A109S	0.104	75	0%	108	35.2%	24	37.5%	benign(0.001)	tolerated(0.66)	neutral(0.003)	NULL
EFEMP2	30008	genome.wustl.edu	37	11	65637603	65637603	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016938.3	-1	reviewed	p.R199H	1.000	31	0%	34	41.2%	74	1.3%	benign(0.123)	tolerated(0.14)	neutral(0.260)	HMMSmart_EGF_CA,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_SSF57196
FIBP	9158	genome.wustl.edu	37	11	65655500	65655500	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198897.1	-1	reviewed	p.F63L	1.000	33	0%	56	25%	111	28.8%	probably_damaging(0.998)	tolerated(0.1)	deleterious(0.761)	HMMPfam_FIBP
CATSPER1	117144	genome.wustl.edu	37	11	65790437	65790437	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053054.3	-1	reviewed	p.E438K	0.000	93	0%	168	32.1%	0	-	benign(0.104)	tolerated(0.61)	neutral(0.012)	superfamily_Voltage-gated potassium channels
CATSPER1	117144	genome.wustl.edu	37	11	65792876	65792876	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053054.3	-1	reviewed	p.L325	0.001	303	0%	748	29.8%	0	-	-	-	-	superfamily_Voltage-gated potassium channels
SF3B2	10992	genome.wustl.edu	37	11	65823051	65823051	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006842.2	+1	reviewed	p.K182E	1.000	157	0%	363	31.7%	83	22.8%	unknown(0)	deleterious(0.04)	-	NULL
SF3B2	10992	genome.wustl.edu	37	11	65825812	65825812	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006842.2	+1	reviewed	p.R301H	1.000	44	0%	67	29.9%	84	46.4%	possibly_damaging(0.945)	deleterious(0.03)	deleterious(0.754)	NULL
PACS1	55690	genome.wustl.edu	37	11	66010673	66010673	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018026.2	+1	reviewed	p.F938L	1.000	97	0%	104	26%	36	13.8%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_Pacs-1
TMEM151A	256472	genome.wustl.edu	37	11	66061917	66061917	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153266.3	+1	validated	p.V67A	0.999	47	0%	56	33.9%	0	-	probably_damaging(0.999)	tolerated(0.16)	deleterious(0.550)	NULL
SLC29A2	3177	genome.wustl.edu	37	11	66130916	66130916	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001532.2	-1	validated	p.A454	0.003	74	0%	157	35%	56	48.2%	-	-	-	HMMPfam_Nucleoside_tran
NPAS4	266743	genome.wustl.edu	37	11	66189940	66189940	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178864.3	+1	validated	p.G116C	1.000	167	0%	261	30.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_PAS,superfamily_SSF55785
NPAS4	266743	genome.wustl.edu	37	11	66192014	66192014	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178864.3	+1	validated	p.E551	0.724	86	0%	178	32.6%	0	-	-	-	-	NULL
CTSF	8722	genome.wustl.edu	37	11	66335464	66335464	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003793.3	-1	reviewed	p.K101N	0.090	49	0%	68	36.8%	23	21.7%	possibly_damaging(0.45)	deleterious(0.02)	deleterious(0.530)	NULL
SPTBN2	6712	genome.wustl.edu	37	11	66468401	66468401	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006946.2	-1	reviewed	p.R1057*	0.837	16	0.000	9	0.556	2	50%	-	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SPTBN2	6712	genome.wustl.edu	37	11	66482700	66482700	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006946.2	-1	reviewed	p.R159Q	0.994	113	0%	171	29.2%	5	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
C11orf80	79703	genome.wustl.edu	37	11	66581405	66581405	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024650.3	+1	validated	p.F370V	0.999	152	0%	307	34.2%	16	37.5%	benign(0.429)	deleterious(0.01)	deleterious(0.545)	NULL
PC	5091	genome.wustl.edu	37	11	66619979	66619979	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000920.3	-1	reviewed	p.D586N	1.000	67	0%	76	35.5%	9	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HMGL-like,superfamily_SSF51569
PC	5091	genome.wustl.edu	37	11	66631257	66631257	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000920.3	-1	reviewed	p.V452	0.998	82	0%	110	30.9%	11	45.4%	-	-	-	HMMPfam_Biotin_carb_C,superfamily_Rudmnt_hyb_motif
KDM2A	22992	genome.wustl.edu	37	11	67012811	67012811	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012308.2	+1	reviewed	p.R572Q	0.997	93	0%	159	37.7%	30	50%	probably_damaging(0.975)	deleterious(0.01)	deleterious(0.823)	HMMPfam_zf-CXXC
RPS6KB2	6199	genome.wustl.edu	37	11	67200130	67200130	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003952.2	+1	reviewed	e6+2	1.000	204	0%	298	28.5%	1	100%	-	-	-	-
PTPRCAP	5790	genome.wustl.edu	37	11	67203434	67203434	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005608.2	-1	reviewed	p.E131K	0.001	44	0%	42	33.3%	44	0%	benign(0)	tolerated(0.19)	neutral(0.050)	NULL
ALDH3B2	222	genome.wustl.edu	37	11	67430779	67430779	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000695.3	-1	reviewed	p.E355D	1.000	113	0%	191	34%	24	41.6%	-	-	-	NULL
ENSG00000221553	0	genome.wustl.edu	37	11	67700767	67700767	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000408626	+1	novel	NULL	0.130	65	0%	112	30.4%	0	-	-	-	-	-
ORAOV1	220064	genome.wustl.edu	37	11	69482348	69482348	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153451.2	-1	validated	p.S118L	0.998	158	0%	305	29.2%	6	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF1715
ANO1	55107	genome.wustl.edu	37	11	69951839	69951839	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018043.5	+1	validated	e5-1	1.000	212	0.5%	276	34.4%	0	-	-	-	-	-
SHANK2	22941	genome.wustl.edu	37	11	70336327	70336327	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133266.3	-1	reviewed	p.P281S	0.007	91	0%	133	33.1%	0	-	unknown(0)	deleterious(0)	-	NULL
SHANK2	22941	genome.wustl.edu	37	11	70507713	70507713	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012309.3	-1	reviewed	p.R54*	1.000	112	0.9%	145	39.3%	1	0%	-	-	-	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ
KRTAP5-7	440050	genome.wustl.edu	37	11	71238695	71238695	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012503.1	+1	validated	p.C117R	1.000	299	0%	301	21.9%	0	-	unknown(0)	deleterious(0)	-	PatternScan_VWFC_1
KRTAP5-11	440051	genome.wustl.edu	37	11	71293666	71293666	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005405.2	-1	validated	p.S73Y	0.502	290	0%	301	31.2%	0	-	unknown(0)	deleterious(0.05)	-	NULL
FAM86C1	55199	genome.wustl.edu	37	11	71500891	71500891	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018172.2	+1	validated	p.K53N	1.000	47	0%	107	36.4%	3	66.6%	possibly_damaging(0.605)	deleterious(0.01)	deleterious(0.615)	NULL
DEFB108B	245911	genome.wustl.edu	37	11	71548577	71548577	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002035.1	+1	provisional	p.R64I	0.000	73	0%	95	43.2%	0	-	possibly_damaging(0.922)	tolerated(0.61)	neutral(0.376)	NULL
LRTOMT	220074	genome.wustl.edu	37	11	71807683	71807683	+	RNA	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026886.1	+1	validated	NULL	0.000	48	0%	54	40.7%	5	40%	-	-	-	-
LRTOMT	220074	genome.wustl.edu	37	11	71807924	71807924	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026886.1	+1	validated	NULL	0.027	24	0%	22	31.8%	1	0%	-	-	-	-
C11orf51	25906	genome.wustl.edu	37	11	71820956	71820956	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014042.2	-1	validated	p.E113K	1.000	152	0%	207	28.5%	83	25.3%	benign(0.019)	tolerated(0.1)	neutral(0.287)	NULL
INPPL1	3636	genome.wustl.edu	37	11	71939864	71939864	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001567.3	+1	reviewed	p.E164A	0.996	32	0%	26	30.8%	50	54%	benign(0.003)	tolerated(0.26)	neutral(0.034)	NULL
LOC220077	220077	genome.wustl.edu	37	11	71961553	71961553	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_017002.2	-1	model	NULL	0.007	19	0%	24	37.5%	0	-	-	-	-	-
LOC220077	220077	genome.wustl.edu	37	11	71961766	71961766	+	RNA	SNP	C	C	T	rs137932387	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_017002.2	-1	model	NULL	0.989	32	0%	33	18.2%	0	-	-	-	-	-
PDE2A	5138	genome.wustl.edu	37	11	72292005	72292005	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002599.3	-1	validated	p.I686	1.000	112	0%	217	30.9%	1	0%	-	-	-	HMMPfam_PDEase_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like
PDE2A	5138	genome.wustl.edu	37	11	72296617	72296617	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002599.3	-1	validated	p.K401N	1.000	140	0%	251	29.9%	0	-	probably_damaging(0.959)	tolerated(0.34)	neutral(0.426)	superfamily_GAF domain-like
STARD10	10809	genome.wustl.edu	37	11	72466148	72466148	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006645.2	-1	validated	p.E224K	1.000	77	0%	106	34%	457	47.9%	benign(0.019)	tolerated(0.31)	neutral(0.028)	HMMPfam_START,HMMSmart_START,superfamily_SSF55961
STARD10	10809	genome.wustl.edu	37	11	72466771	72466771	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006645.2	-1	validated	p.K202T	1.000	85	0%	115	38.3%	401	45.3%	benign(0.008)	tolerated(0.17)	neutral(0.059)	HMMPfam_START,HMMSmart_START,superfamily_SSF55961
FCHSD2	9873	genome.wustl.edu	37	11	72553855	72553855	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014824.2	-1	validated	p.E579D	0.999	158	0%	275	31.6%	4	50%	benign(0.003)	tolerated(0.9)	-	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
FCHSD2	9873	genome.wustl.edu	37	11	72560875	72560875	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014824.2	-1	validated	p.F456	1.000	228	0%	415	31.6%	11	27.2%	unknown(0)	deleterious(0)	-	superfamily_SH3-domain
FCHSD2	9873	genome.wustl.edu	37	11	72613641	72613641	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014824.2	-1	validated	p.A291T	1.000	104	0%	245	38.8%	6	50%	benign(0)	tolerated(0.38)	neutral(0.018)	NULL
FCHSD2	9873	genome.wustl.edu	37	11	72700091	72700091	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014824.2	-1	validated	p.D147Y	1.000	360	0%	475	31.6%	6	33.3%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	NULL
PAAF1	80227	genome.wustl.edu	37	11	73611329	73611329	+	Silent	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025155.1	+1	provisional	p.G132	1.000	347	0%	704	35.7%	7	0%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
DNAJB13	374407	genome.wustl.edu	37	11	73679425	73679425	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153614.2	+1	provisional	p.I214	0.235	133	0.8%	256	30.5%	2	50%	-	-	-	HMMPfam_DnaJ_C,superfamily_HSP40/DnaJ peptide-binding domain
C2CD3	26005	genome.wustl.edu	37	11	73809064	73809064	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015531.4	-1	validated	p.S990Y	1.000	90	0%	152	32.2%	3	66.6%	probably_damaging(0.984)	deleterious(0.01)	deleterious(0.836)	NULL
P4HA3	283208	genome.wustl.edu	37	11	73979256	73979256	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182904.3	-1	reviewed	p.R500	0.999	106	0%	180	38.9%	4	0%	-	-	-	HMMPfam_2OG-FeII_Oxy,HMMSmart_SM00702
POLD3	10714	genome.wustl.edu	37	11	74329805	74329805	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006591.1	+1	validated	p.E206*	1.000	124	0%	299	27.4%	7	0%	-	-	-	HMMPfam_CDC27
RNF169	254225	genome.wustl.edu	37	11	74521325	74521325	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098638.1	+1	validated	p.E225*	1.000	141	0%	269	24.5%	1	0%	-	-	-	NULL
XRRA1	143570	genome.wustl.edu	37	11	74562192	74562192	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182969.1	-1	validated	p.R433*	1.000	130	0%	156	23.1%	4	75%	-	-	-	superfamily_L domain-like
SLCO2B1	11309	genome.wustl.edu	37	11	74875147	74875147	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007256.3	+1	validated	e3+2	1.000	15	0%	16	43.8%	0	-	-	-	-	-
GDPD5	81544	genome.wustl.edu	37	11	75155480	75155480	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030792.6	-1	validated	p.L259F	0.149	74	0%	101	38.6%	4	0%	benign(0.071)	tolerated(0.35)	neutral(0.026)	HMMPfam_GDPD,superfamily_PLC-like phosphodiesterases
DGAT2	84649	genome.wustl.edu	37	11	75508249	75508249	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032564.3	+1	validated	p.K227N	1.000	130	0%	168	25.6%	1	0%	possibly_damaging(0.49)	tolerated(0.13)	neutral(0.415)	HMMPfam_DAGAT
LRRC32	2615	genome.wustl.edu	37	11	76370908	76370908	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128922.1	-1	reviewed	p.G577S	0.974	41	0%	63	39.7%	6	0%	probably_damaging(0.988)	tolerated(0.31)	neutral(0.465)	superfamily_SSF52058
LRRC32	2615	genome.wustl.edu	37	11	76371068	76371068	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128922.1	-1	reviewed	p.E523D	0.976	22	0%	35	40%	7	0%	benign(0.218)	tolerated(0.62)	neutral(0.025)	superfamily_SSF52058
CAPN5	726	genome.wustl.edu	37	11	76834762	76834762	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004055.4	+1	reviewed	p.E590G	1.000	90	0%	72	37.5%	11	9%	benign(0.003)	tolerated(0.29)	neutral(0.029)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
MYO7A	4647	genome.wustl.edu	37	11	76868005	76868005	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000260.3	+1	reviewed	p.A230	1.000	42	0%	63	34.9%	0	-	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO7A	4647	genome.wustl.edu	37	11	76873970	76873970	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000260.3	+1	reviewed	p.K542N	1.000	331	0%	524	26%	1	0%	probably_damaging(0.97)	deleterious(0)	deleterious(0.857)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
RSF1	51773	genome.wustl.edu	37	11	77378145	77378145	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016578.3	-1	validated	p.E1381	1.000	120	0%	145	37.2%	23	39.1%	-	-	-	NULL
RSF1	51773	genome.wustl.edu	37	11	77409662	77409662	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016578.3	-1	validated	p.S862N	1.000	189	0%	261	36.4%	12	41.6%	possibly_damaging(0.81)	tolerated(0.34)	neutral(0.328)	NULL
RSF1	51773	genome.wustl.edu	37	11	77412666	77412666	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016578.3	-1	validated	p.E536D	0.982	173	0%	278	34.9%	9	44.4%	benign(0.098)	tolerated(0.31)	neutral(0.035)	NULL
INTS4	92105	genome.wustl.edu	37	11	77602451	77602451	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033547.3	-1	validated	p.R836W	0.997	71	0%	136	34.6%	37	45.9%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
KCTD14	65987	genome.wustl.edu	37	11	77728067	77728067	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023930.3	-1	validated	p.E114K	0.953	79	0%	131	37.4%	34	44.1%	possibly_damaging(0.513)	tolerated(0.58)	neutral(0.177)	HMMSmart_BTB,HMMPfam_K_tetra,superfamily_BTB/POZ_fold
USP35	57558	genome.wustl.edu	37	11	77907300	77907300	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020798.2	+1	provisional	p.K3N	1.000	33	0%	48	45.8%	0	-	unknown(0)	deleterious(0.01)	-	NULL
GAB2	9846	genome.wustl.edu	37	11	77991678	77991678	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080491.2	-1	reviewed	p.I115	1.000	211	0%	304	35.2%	9	55.5%	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
GAB2	9846	genome.wustl.edu	37	11	77991828	77991828	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080491.2	-1	reviewed	p.F65L	1.000	158	0%	199	33.7%	6	0%	benign(0)	tolerated(1)	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
NARS2	79731	genome.wustl.edu	37	11	78152161	78152161	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024678.4	-1	validated	p.S422L	0.680	102	0%	179	34.6%	21	66.6%	benign(0)	tolerated(1)	-	HMMPfam_tRNA-synt_2,superfamily_Class II aaRS and biotin synthetases
NARS2	79731	genome.wustl.edu	37	11	78282480	78282480	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024678.4	-1	validated	p.R51S	1.000	123	0%	222	26.6%	8	12.5%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_tRNA_anti,superfamily_Nucleic acid-binding proteins
ODZ4	26011	genome.wustl.edu	37	11	78600873	78600873	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098816.2	-1	validated	p.I347	0.997	187	0%	209	28.7%	0	-	-	-	-	NULL
PCF11	51585	genome.wustl.edu	37	11	82888854	82888854	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015885.3	+1	validated	p.L1326	0.999	88	0%	132	29.5%	18	38.8%	-	-	-	NULL
DLG2	1740	genome.wustl.edu	37	11	83173057	83173057	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142699.1	-1	reviewed	p.E937*	1.000	394	0%	394	25.6%	0	-	-	-	-	HMMSmart_SM00072,HMMPfam_Gua_kin_assoc_C,superfamily_P-loop containing nucleoside triphosphate hydrolases
DLG2	1740	genome.wustl.edu	37	11	83180409	83180409	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142699.1	-1	reviewed	p.T818	0.413	311	0%	226	35%	0	-	-	-	-	HMMPfam_Guanylate_kin,HMMSmart_SM00072,PatternScan_GUANYLATE_KINASE_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
DLG2	1740	genome.wustl.edu	37	11	83344359	83344359	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142699.1	-1	reviewed	p.R612Q	1.000	217	0%	198	32.8%	2	50%	probably_damaging(0.999)	tolerated(0.09)	deleterious(0.787)	superfamily_PDZ domain-like
DLG2	1740	genome.wustl.edu	37	11	84865682	84865682	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142699.1	-1	reviewed	p.S67N	0.908	363	0%	299	33.4%	0	-	benign(0.378)	tolerated(0.59)	neutral(0.125)	NULL
TMEM126B	55863	genome.wustl.edu	37	11	85342821	85342821	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018480.2	+1	provisional	p.E28*	1.000	68	0%	73	42.5%	19	26.3%	-	-	-	HMMPfam_DUF1370
SYTL2	54843	genome.wustl.edu	37	11	85407243	85407243	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206927.2	-1	reviewed	p.R1219H	1.000	147	0%	154	41.6%	7	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
SYTL2	54843	genome.wustl.edu	37	11	85407400	85407400	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206927.2	-1	reviewed	p.R1167C	1.000	247	0%	331	29%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
SYTL2	54843	genome.wustl.edu	37	11	85418483	85418483	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206927.2	-1	reviewed	p.E1036K	1.000	473	0%	522	28.4%	3	0%	possibly_damaging(0.704)	deleterious(0)	deleterious(0.698)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
SYTL2	54843	genome.wustl.edu	37	11	85436163	85436163	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206927.2	-1	reviewed	p.P446H	0.025	64	0%	103	38.8%	0	-	possibly_damaging(0.891)	deleterious(0)	deleterious(0.795)	NULL
SYTL2	54843	genome.wustl.edu	37	11	85437427	85437427	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206927.2	-1	reviewed	p.E25*	0.739	190	0%	183	29%	0	-	-	-	-	NULL
SYTL2	54843	genome.wustl.edu	37	11	85447595	85447595	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032943.3	-1	reviewed	p.N178H	0.986	557	0%	648	36.9%	0	-	benign(0.133)	tolerated(0.09)	neutral(0.307)	NULL
CCDC83	220047	genome.wustl.edu	37	11	85623769	85623769	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173556.3	+1	provisional	p.S291Y	0.872	367	0%	556	30%	0	-	possibly_damaging(0.604)	deleterious(0.02)	deleterious(0.593)	NULL
PICALM	8301	genome.wustl.edu	37	11	85707892	85707892	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007166.2	-1	validated	p.S412Y	1.000	148	0%	249	32.9%	40	62.5%	benign(0.009)	tolerated(0.12)	neutral(0.261)	NULL
PICALM	8301	genome.wustl.edu	37	11	85723423	85723423	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007166.2	-1	validated	p.E187*	1.000	228	0%	361	27.4%	17	5.8%	-	-	-	HMMPfam_ANTH,superfamily_GAT-like domain
PICALM	8301	genome.wustl.edu	37	11	85737348	85737348	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007166.2	-1	validated	p.K112R	1.000	257	0%	281	33.1%	20	5%	benign(0.003)	tolerated(0.31)	neutral(0.027)	superfamily_ENTH/VHS domain,HMMPfam_ANTH,HMMSmart_SM00273
ME3	10873	genome.wustl.edu	37	11	86159236	86159236	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014811.1	-1	reviewed	p.S398F	0.994	136	0%	149	28.9%	2	0%	benign(0.296)	deleterious(0.05)	neutral(0.437)	HMMPfam_Malic_M,superfamily_NAD(P)-bd
ME3	10873	genome.wustl.edu	37	11	86176191	86176191	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014811.1	-1	reviewed	p.A287	1.000	282	0%	415	31.8%	0	-	-	-	-	HMMPfam_malic,superfamily_SSF53223
PRSS23	11098	genome.wustl.edu	37	11	86518704	86518704	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007173.4	+1	validated	p.L7F	0.999	264	0%	258	29.8%	31	25.8%	benign(0.001)	tolerated(0.13)	neutral(0.253)	NULL
GRM5	2915	genome.wustl.edu	37	11	88301131	88301131	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143831.2	-1	reviewed	p.R574*	0.973	116	0%	159	34%	0	-	-	-	-	NULL
GRM5	2915	genome.wustl.edu	37	11	88330482	88330482	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143831.2	-1	reviewed	p.Y478C	1.000	283	0%	324	26.9%	0	-	possibly_damaging(0.794)	tolerated(0.1)	deleterious(0.585)	superfamily_Periplasmic binding protein-like I
GRM5	2915	genome.wustl.edu	37	11	88337960	88337960	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143831.2	-1	reviewed	p.S440	0.998	165	0%	145	26.9%	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRM5	2915	genome.wustl.edu	37	11	88338129	88338129	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143831.2	-1	reviewed	p.S384Y	0.998	105	0%	98	26.5%	0	-	benign(0)	tolerated(0.19)	neutral(0.050)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRM5	2915	genome.wustl.edu	37	11	88583092	88583092	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143831.2	-1	reviewed	p.E298A	1.000	111	0%	135	30.4%	0	-	possibly_damaging(0.853)	tolerated(0.2)	neutral(0.378)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
NOX4	50507	genome.wustl.edu	37	11	89088167	89088167	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016931.3	-1	reviewed	p.E394K	0.997	307	0.3%	311	27%	10	10%	benign(0.021)	tolerated(0.39)	neutral(0.017)	HMMPfam_FAD_binding_8,superfamily_Riboflavin synthase domain-like
TRIM77P	390231	genome.wustl.edu	37	11	89447447	89447447	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343107.1	+1	model	p.E199*	0.024	139	0%	201	31.3%	0	-	-	-	-	NULL
TRIM77P	390231	genome.wustl.edu	37	11	89450739	89450739	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343107.1	+1	model	p.C351F	0.000	271	0.4%	280	21.1%	0	-	-	-	-	HMMPfam_SPRY
TRIM49	57093	genome.wustl.edu	37	11	89531486	89531486	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020358.2	-1	reviewed	p.L391I	0.002	164	0%	298	24.2%	0	-	probably_damaging(0.966)	deleterious(0)	deleterious(0.853)	HMMPfam_SPRY
ENSG00000204455	0	genome.wustl.edu	37	11	89595809	89595809	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000311917	+1	known	p.D380E	0.000	256	0%	430	16.7%	0	-	-	-	-	HMMPfam_SPRY
TRIM64B	642446	genome.wustl.edu	37	11	89604018	89604018	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000329862	-1	known	p.R374I	0.002	492	0%	532	19.4%	0	-	benign(0)	tolerated(0.27)	neutral(0.034)	HMMPfam_SPRY
TRIM64B	642446	genome.wustl.edu	37	11	89604038	89604038	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000329862	-1	known	p.F367	0.000	420	0%	421	20%	0	-	-	-	-	HMMPfam_SPRY
ENSG00000223709	0	genome.wustl.edu	37	11	89790999	89790999	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000436580	-1	known	p.R373I	0.001	169	0%	242	48.3%	0	-	-	-	-	HMMPfam_SPRY,HMMSmart_SM00449
ENSG00000204449	0	genome.wustl.edu	37	11	89806361	89806361	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000432771	+1	known	p.H382N	0.000	118	0%	113	19.5%	0	-	possibly_damaging(0.85)	deleterious(0.02)	deleterious(0.710)	HMMPfam_SPRY
NAALAD2	10003	genome.wustl.edu	37	11	89896718	89896718	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005467.3	+1	reviewed	p.R404I	1.000	196	0%	191	29.3%	2	0%	unknown(0)	deleterious(0)	-	HMMPfam_Peptidase_M28,superfamily_Zn-dependent exopeptidases
ENSG00000214391	0	genome.wustl.edu	37	11	90016441	90016441	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000318973	+1	known	p.E206K	1.000	261	0%	402	34.1%	164	0%	-	-	-	HMMPfam_Tubulin,superfamily_Tubulin_FtsZ
FAT3	120114	genome.wustl.edu	37	11	92087768	92087768	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008781.2	+1	validated	p.V830	0.510	149	0%	141	34%	0	-	-	-	-	superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92087884	92087884	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008781.2	+1	validated	p.S869L	1.000	175	0%	151	39.1%	0	-	possibly_damaging(0.943)	deleterious(0.01)	deleterious(0.793)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92525939	92525939	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008781.2	+1	validated	p.D1540N	1.000	238	0%	204	34.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92532184	92532184	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008781.2	+1	validated	p.A2002D	1.000	91	0%	137	29.9%	0	-	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	HMMPfam_Cadherin,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92532333	92532333	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008781.2	+1	validated	p.L2052	1.000	126	0%	112	33.9%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92532848	92532848	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008781.2	+1	validated	p.I2223	0.038	111	0%	133	33.1%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92533638	92533638	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008781.2	+1	validated	p.L2487F	0.687	195	0%	239	30.1%	0	-	possibly_damaging(0.631)	tolerated(0.08)	deleterious(0.520)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92534397	92534397	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008781.2	+1	validated	p.F2740L	0.999	137	0%	177	33.9%	0	-	benign(0.246)	deleterious(0.02)	neutral(0.408)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like
FAT3	120114	genome.wustl.edu	37	11	92592329	92592329	+	Splice_Site	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008781.2	+1	validated	e20-2	1.000	234	0%	234	33.8%	0	-	-	-	-	-
FAT3	120114	genome.wustl.edu	37	11	92592375	92592375	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008781.2	+1	validated	p.R3849W	1.000	309	0%	292	29.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Concanavalin A-like lectins/glucanases
FAT3	120114	genome.wustl.edu	37	11	92615943	92615943	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008781.2	+1	validated	p.C4107	0.948	169	0%	130	30%	0	-	-	-	-	HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_CA,superfamily_EGF/Laminin
SLC36A4	120103	genome.wustl.edu	37	11	92881895	92881895	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152313.2	-1	provisional	p.S441	0.971	96	0%	41	41.5%	15	6.6%	-	-	-	HMMPfam_Aa_trans
SLC36A4	120103	genome.wustl.edu	37	11	92896014	92896014	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152313.2	-1	provisional	p.E299*	1.000	176	0%	183	37.2%	8	0%	-	-	-	HMMPfam_Aa_trans
CCDC67	159989	genome.wustl.edu	37	11	93127778	93127778	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181645.3	+1	validated	p.K399Q	1.000	94	0%	108	31.5%	0	-	possibly_damaging(0.633)	deleterious(0.01)	deleterious(0.627)	NULL
KIAA1731	85459	genome.wustl.edu	37	11	93430970	93430970	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033395.1	+1	validated	p.L964	0.955	65	0%	102	25.5%	1	0%	-	-	-	NULL
KIAA1731	85459	genome.wustl.edu	37	11	93433231	93433231	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033395.1	+1	validated	p.R1718I	0.384	116	0%	156	34.6%	2	100%	possibly_damaging(0.951)	deleterious(0)	deleterious(0.839)	NULL
KIAA1731	85459	genome.wustl.edu	37	11	93458827	93458827	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033395.1	+1	validated	p.S2110Y	0.008	171	0%	259	32%	4	75%	probably_damaging(0.982)	tolerated(0.21)	deleterious(0.470)	NULL
TAF1D	79101	genome.wustl.edu	37	11	93471465	93471465	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024116.3	-1	validated	p.R90I	0.696	114	0%	133	25.6%	42	35.7%	benign(0.007)	deleterious(0.01)	neutral(0.406)	NULL
HEPHL1	341208	genome.wustl.edu	37	11	93796828	93796828	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098672.1	+1	validated	p.I190	0.794	109	0%	93	39.8%	0	-	-	-	-	superfamily_Cupredoxin
HEPHL1	341208	genome.wustl.edu	37	11	93806546	93806546	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098672.1	+1	validated	p.S482I	1.000	152	0%	151	33.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Cupredoxin
HEPHL1	341208	genome.wustl.edu	37	11	93815698	93815698	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098672.1	+1	validated	p.E611*	1.000	145	0%	127	33.9%	0	-	-	-	-	superfamily_Cupredoxin
HEPHL1	341208	genome.wustl.edu	37	11	93839168	93839168	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098672.1	+1	validated	p.K973Q	0.995	224	0%	253	33.6%	0	-	probably_damaging(0.999)	tolerated(0.32)	deleterious(0.514)	superfamily_Cupredoxin,HMMPfam_Cu-oxidase_2
HEPHL1	341208	genome.wustl.edu	37	11	93844085	93844085	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098672.1	+1	validated	p.R1021Q	1.000	252	0%	226	29.6%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_Cupredoxin,HMMPfam_Cu-oxidase_2
PANX1	24145	genome.wustl.edu	37	11	93914016	93914016	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015368.3	+1	reviewed	p.L421R	0.997	346	0%	351	39%	7	57.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MRE11A	4361	genome.wustl.edu	37	11	94192696	94192696	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005591.3	-1	reviewed	p.E460*	1.000	339	0%	441	32.2%	6	0%	-	-	-	HMMPfam_Mre11_DNA_bind
PIWIL4	143689	genome.wustl.edu	37	11	94340634	94340634	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152431.2	+1	validated	p.K556N	1.000	253	0.4%	277	28.9%	1	0%	probably_damaging(0.994)	deleterious(0.03)	deleterious(0.817)	HMMPfam_Piwi,superfamily_Ribonuclease H-like
AMOTL1	154810	genome.wustl.edu	37	11	94501681	94501681	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130847.2	+1	reviewed	p.W2R	0.998	54	0%	66	40.9%	2	50%	benign(0)	tolerated(0.68)	neutral(0.002)	NULL
AMOTL1	154810	genome.wustl.edu	37	11	94528264	94528264	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130847.2	+1	reviewed	p.S46Y	0.995	165	0%	262	32.1%	2	0%	possibly_damaging(0.926)	deleterious(0)	deleterious(0.819)	NULL
AMOTL1	154810	genome.wustl.edu	37	11	94564656	94564656	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130847.2	+1	reviewed	p.E533K	1.000	168	0%	230	31.3%	5	40%	possibly_damaging(0.902)	tolerated(0.07)	deleterious(0.676)	NULL
KDM4DL	390245	genome.wustl.edu	37	11	94759472	94759472	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000450979	+1	known	p.L251I	0.925	101	0%	131	42.7%	0	-	probably_damaging(0.988)	deleterious(0.02)	deleterious(0.821)	HMMSmart_JmjC,HMMPfam_JmjC
KDM4DL	390245	genome.wustl.edu	37	11	94760160	94760160	+	Nonsense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000450979	+1	known	p.L480*	0.000	107	0%	201	33.3%	0	-	-	-	-	NULL
CEP57	9702	genome.wustl.edu	37	11	95555087	95555087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014679.3	+1	validated	p.P251L	0.009	140	0%	138	39.1%	13	38.4%	benign(0.002)	deleterious(0.01)	neutral(0.406)	HMMPfam_DUF1167
MTMR2	8898	genome.wustl.edu	37	11	95568575	95568575	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016156.5	-1	reviewed	p.R604Q	1.000	263	0%	151	31.8%	25	36%	possibly_damaging(0.513)	tolerated(0.3)	neutral(0.201)	NULL
JRKL	8690	genome.wustl.edu	37	11	96124636	96124636	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003772.3	+1	reviewed	p.R275*	0.953	70	0%	139	26.6%	8	62.5%	-	-	-	HMMPfam_DDE
CNTN5	53942	genome.wustl.edu	37	11	99690268	99690268	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000279463	+1	known	p.L1I	0.945	82	0%	93	36.6%	0	-	-	-	-	NULL
CNTN5	53942	genome.wustl.edu	37	11	100126538	100126538	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014361.2	+1	reviewed	p.E684	0.872	162	0%	282	31.6%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_Immunoglobulin
CNTN5	53942	genome.wustl.edu	37	11	100169929	100169929	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014361.2	+1	reviewed	p.F807	1.000	113	0%	45	33.3%	1	100%	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
ARHGAP42	143872	genome.wustl.edu	37	11	100792260	100792260	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152432.2	+1	provisional	p.F174L	1.000	131	0%	97	28.9%	1	0%	probably_damaging(0.994)	deleterious(0.04)	deleterious(0.801)	NULL
ARHGAP42	143872	genome.wustl.edu	37	11	100819223	100819223	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152432.2	+1	provisional	p.A360D	1.000	135	0%	73	32.9%	0	-	benign(0.226)	tolerated(0.53)	neutral(0.030)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
ARHGAP42	143872	genome.wustl.edu	37	11	100843949	100843949	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152432.2	+1	provisional	p.L532I	1.000	105	0%	105	34.3%	3	66.6%	probably_damaging(0.974)	deleterious(0.01)	deleterious(0.822)	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
TRPC6	7225	genome.wustl.edu	37	11	101359799	101359799	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004621.5	-1	reviewed	p.L388I	0.997	91	0%	146	36.3%	0	-	possibly_damaging(0.951)	tolerated(0.1)	deleterious(0.680)	NULL
KIAA1377	57562	genome.wustl.edu	37	11	101793446	101793446	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020802.2	+1	validated	p.R68Q	1.000	161	0%	218	29.8%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KIAA1377	57562	genome.wustl.edu	37	11	101832972	101832972	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020802.2	+1	validated	p.F402L	0.003	32	0%	52	26.9%	1	100%	benign(0.004)	tolerated(1)	-	NULL
KIAA1377	57562	genome.wustl.edu	37	11	101833221	101833221	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020802.2	+1	validated	p.I485M	0.046	96	0%	137	38%	1	100%	benign(0.028)	deleterious(0.02)	neutral(0.385)	NULL
KIAA1377	57562	genome.wustl.edu	37	11	101834276	101834276	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020802.2	+1	validated	p.S837Y	0.000	175	0%	193	31.1%	1	100%	benign(0)	tolerated(1)	-	NULL
C11orf70	85016	genome.wustl.edu	37	11	101951950	101951950	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032930.1	+1	predicted	p.R167*	1.000	151	0%	238	38.7%	12	25%	-	-	-	NULL
BIRC3	330	genome.wustl.edu	37	11	102199655	102199655	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001165.3	+1	reviewed	p.D354Y	1.000	42	0%	65	10.8%	2	0%	probably_damaging(0.974)	deleterious(0.02)	deleterious(0.799)	superfamily_SSF57924
MMP8	4317	genome.wustl.edu	37	11	102584157	102584157	+	Nonsense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002424.2	-1	reviewed	p.Y442*	0.206	234	0%	214	37.9%	0	-	-	-	-	superfamily_Hemopexin,HMMPfam_Hemopexin,HMMSmart_HX
MMP1	4312	genome.wustl.edu	37	11	102665952	102665952	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002421.3	-1	reviewed	p.F284	0.954	251	0%	300	29.3%	1	0%	-	-	-	superfamily_Hemopexin,HMMPfam_Hemopexin,HMMSmart_HX
MMP12	4321	genome.wustl.edu	37	11	102745643	102745643	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000326227	-1	known	p.L9	0.002	191	0%	208	36.1%	0	-	-	-	-	NULL
MMP13	4322	genome.wustl.edu	37	11	102819780	102819780	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002427.3	-1	reviewed	p.S342Y	0.001	189	0%	201	29.9%	0	-	benign(0.062)	deleterious(0.04)	neutral(0.353)	superfamily_Hemopexin,HMMPfam_Hemopexin,HMMSmart_HX
DYNC2H1	79659	genome.wustl.edu	37	11	103014039	103014039	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080463.1	+1	reviewed	p.E873*	1.000	323	0%	457	32.2%	0	-	-	-	-	NULL
DYNC2H1	79659	genome.wustl.edu	37	11	103026059	103026059	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080463.1	+1	reviewed	e25-1	1.000	159	0%	139	27.3%	0	-	-	-	-	-
DYNC2H1	79659	genome.wustl.edu	37	11	103047131	103047131	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080463.1	+1	reviewed	p.E1948*	1.000	187	0%	170	35.3%	0	-	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
DYNC2H1	79659	genome.wustl.edu	37	11	103062276	103062276	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080463.1	+1	reviewed	p.S2490C	1.000	442	0%	514	34%	0	-	probably_damaging(0.968)	tolerated(0.09)	deleterious(0.706)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DYNC2H1	79659	genome.wustl.edu	37	11	103104762	103104762	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080463.1	+1	reviewed	e61-1	1.000	105	0%	72	37.5%	0	-	-	-	-	-
DYNC2H1	79659	genome.wustl.edu	37	11	103191810	103191810	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080463.1	+1	reviewed	p.I3933M	1.000	223	0%	217	32.7%	9	33.3%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_Dynein_heavy
CASP1	834	genome.wustl.edu	37	11	104901930	104901930	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033292.2	-1	reviewed	p.E139*	0.016	302	0%	229	36.7%	5	0%	-	-	-	superfamily_Caspase-like
CARD16	114769	genome.wustl.edu	37	11	104912293	104912293	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017534.1	-1	validated	p.R143I	0.038	179	0%	137	25.5%	1	0%	unknown(0)	-	-	NULL
GRIA4	2893	genome.wustl.edu	37	11	105483047	105483047	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000829.3	+1	reviewed	p.R45*	1.000	245	0%	236	32.2%	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_SSF53822
MSANTD4	84437	genome.wustl.edu	37	11	105881303	105881303	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032424.1	-1	validated	p.K114N	1.000	247	0%	281	27%	7	57.1%	probably_damaging(0.97)	tolerated(0.06)	deleterious(0.735)	NULL
AASDHPPT	60496	genome.wustl.edu	37	11	105950307	105950307	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015423.2	+1	reviewed	p.S99	0.369	126	0%	188	34%	23	47.8%	-	-	-	superfamily_4-PPT_transf
ELMOD1	55531	genome.wustl.edu	37	11	107501440	107501440	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018712.3	+1	validated	p.D60N	0.995	250	0%	189	32.3%	0	-	benign(0)	tolerated(0.31)	neutral(0.027)	NULL
RAB39A	54734	genome.wustl.edu	37	11	107833084	107833084	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017516.1	+1	provisional	p.E214*	1.000	53	0%	108	38.9%	0	-	-	-	-	HMMSmart_SM00176,superfamily_P-loop containing nucleoside triphosphate hydrolases
CUL5	8065	genome.wustl.edu	37	11	107966303	107966303	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003478.3	+1	validated	p.T597M	1.000	131	0%	218	33%	5	80%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cullin,superfamily_Cullin homology domain
CUL5	8065	genome.wustl.edu	37	11	107969240	107969240	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003478.3	+1	validated	p.R711Q	1.000	69	0%	150	29.3%	6	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	"HMMPfam_Cullin_Nedd8,superfamily_""Winged helix"" DNA-binding domain"
ACAT1	38	genome.wustl.edu	37	11	108002641	108002641	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000019.3	+1	reviewed	p.R27I	0.424	49	0%	51	29.4%	4	0%	possibly_damaging(0.833)	deleterious(0)	deleterious(0.762)	NULL
ACAT1	38	genome.wustl.edu	37	11	108009763	108009763	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000019.3	+1	reviewed	p.H192N	1.000	145	0%	318	28.6%	20	40%	probably_damaging(0.998)	tolerated(0.17)	deleterious(0.533)	HMMPfam_Thiolase_N,superfamily_Thiolase-like
ATM	472	genome.wustl.edu	37	11	108115600	108115600	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000051.3	+1	reviewed	p.R250*	0.997	211	0%	261	27.6%	1	0%	-	-	-	NULL
ATM	472	genome.wustl.edu	37	11	108216486	108216486	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000051.3	+1	reviewed	p.S2812Y	0.979	105	0%	92	35.9%	5	100%	possibly_damaging(0.822)	tolerated(0.28)	neutral(0.343)	HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,superfamily_Protein kinase-like (PK-like),superfamily_ARM repeat
EXPH5	23086	genome.wustl.edu	37	11	108380473	108380473	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015065.2	-1	validated	p.F1921V	1.000	147	0%	215	34.9%	6	16.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
EXPH5	23086	genome.wustl.edu	37	11	108381917	108381917	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015065.2	-1	validated	p.Q1439H	0.000	155	0%	211	35.1%	1	100%	benign(0.006)	deleterious(0)	neutral(0.445)	NULL
EXPH5	23086	genome.wustl.edu	37	11	108384444	108384444	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015065.2	-1	validated	p.L597S	0.000	81	0%	84	23.8%	0	-	benign(0.113)	tolerated(0.31)	neutral(0.036)	NULL
DDX10	1662	genome.wustl.edu	37	11	108593996	108593996	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004398.2	+1	reviewed	p.E591A	0.023	210	0%	286	30.8%	20	50%	benign(0.032)	tolerated(0.17)	neutral(0.060)	NULL
ZC3H12C	85463	genome.wustl.edu	37	11	110030212	110030212	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033390.1	+1	validated	p.D382G	1.000	68	0%	82	31.7%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
RDX	5962	genome.wustl.edu	37	11	110108305	110108305	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002906.3	-1	reviewed	p.R388Q	1.000	310	0%	475	32.8%	10	0%	benign(0.105)	tolerated(0.4)	neutral(0.024)	HMMPfam_ERM
RDX	5962	genome.wustl.edu	37	11	110124752	110124752	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002906.3	-1	reviewed	p.R293Q	1.000	226	0%	293	28.3%	8	0%	possibly_damaging(0.564)	deleterious(0)	deleterious(0.637)	HMMPfam_FERM_C,superfamily_PH domain-like
RDX	5962	genome.wustl.edu	37	11	110134830	110134830	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002906.3	-1	reviewed	p.E108*	1.000	113	0%	154	20.1%	7	0%	-	-	-	HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295
ARHGAP20	57569	genome.wustl.edu	37	11	110450673	110450673	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020809.2	-1	validated	p.S999	0.087	85	0%	114	28.1%	0	-	-	-	-	NULL
ARHGAP20	57569	genome.wustl.edu	37	11	110457032	110457032	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020809.2	-1	validated	p.I441	0.999	87	0%	57	45.6%	0	-	-	-	-	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
BTG4	54766	genome.wustl.edu	37	11	111369461	111369461	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017589.2	-1	reviewed	p.R14I	1.000	248	0%	232	28.9%	0	-	probably_damaging(0.957)	deleterious(0.01)	deleterious(0.806)	HMMPfam_BTG,HMMSmart_btg1
C11orf88	399949	genome.wustl.edu	37	11	111385664	111385664	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207430.2	+1	validated	p.S52F	0.992	66	0%	67	32.8%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
SIK2	23235	genome.wustl.edu	37	11	111574103	111574103	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015191.1	+1	validated	p.R302*	1.000	120	0%	178	32%	4	25%	-	-	-	superfamily_Protein kinase-like (PK-like)
SIK2	23235	genome.wustl.edu	37	11	111575755	111575755	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015191.1	+1	validated	p.F331	1.000	212	0%	276	31.9%	3	33.3%	-	-	-	superfamily_Protein kinase-like (PK-like)
BCO2	83875	genome.wustl.edu	37	11	112065435	112065435	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031938.4	+1	validated	p.L231	0.816	202	0%	272	34.2%	0	-	-	-	-	HMMPfam_RPE65
BCO2	83875	genome.wustl.edu	37	11	112072759	112072759	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031938.4	+1	validated	p.R347K	0.114	149	0%	215	32.1%	0	-	benign(0)	tolerated(1)	-	HMMPfam_RPE65
NCAM1	4684	genome.wustl.edu	37	11	113130947	113130947	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000401611	+1	known	p.A585V	0.998	225	0%	294	36.7%	3	66.6%	benign(0.001)	tolerated(0.16)	neutral(0.059)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
LOC100288346	100288346	genome.wustl.edu	37	11	113140924	113140924	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343129.1	-1	model	e2+2	0.954	168	0%	114	47.4%	5	60%	benign(0.003)	tolerated(0.72)	neutral(0.002)	-
NCAM1	4684	genome.wustl.edu	37	11	113142517	113142517	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000433634	+1	known	p.R247Q	1.000	108	0%	191	31.9%	3	33.3%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
DRD2	1813	genome.wustl.edu	37	11	113288842	113288842	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000795.3	-1	reviewed	p.K101T	1.000	130	0%	188	34.6%	0	-	benign(0)	tolerated(0.59)	neutral(0.004)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
LOC390251	390251	genome.wustl.edu	37	11	113660410	113660410	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_016610.3	+1	model	NULL	0.491	35	0%	48	25%	2	0%	-	-	-	-
LOC390251	390251	genome.wustl.edu	37	11	113660567	113660567	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_016610.3	+1	model	NULL	1.000	25	0%	24	33.3%	0	-	-	-	-	-
USP28	57646	genome.wustl.edu	37	11	113704272	113704272	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020886.2	-1	validated	p.R210I	1.000	104	0%	160	32.5%	8	37.5%	probably_damaging(0.994)	deleterious(0.03)	deleterious(0.817)	HMMPfam_UCH,superfamily_Cysteine proteinases
HTR3B	9177	genome.wustl.edu	37	11	113802114	113802114	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006028.3	+1	reviewed	p.E74D	1.000	207	0%	207	30.4%	0	-	benign(0.202)	deleterious(0.05)	neutral(0.365)	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
HTR3B	9177	genome.wustl.edu	37	11	113802536	113802536	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006028.3	+1	reviewed	p.E105D	1.000	160	0%	211	27.5%	0	-	possibly_damaging(0.919)	tolerated(0.06)	deleterious(0.692)	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
ZBTB16	7704	genome.wustl.edu	37	11	113934498	113934498	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001018011.1	+1	reviewed	p.S159L	1.000	35	0%	53	47.2%	0	-	benign(0.429)	deleterious(0.01)	deleterious(0.545)	NULL
ZBTB16	7704	genome.wustl.edu	37	11	114057719	114057719	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001018011.1	+1	reviewed	p.S471L	0.991	244	0%	362	34.8%	1	0%	benign(0.235)	deleterious(0.02)	neutral(0.407)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
NNMT	4837	genome.wustl.edu	37	11	114183101	114183101	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006169.2	+1	reviewed	p.E233K	0.000	92	0%	86	31.4%	146	0%	benign(0.001)	tolerated(0.11)	neutral(0.272)	HMMPfam_NNMT_PNMT_TEMT,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
RBM7	10179	genome.wustl.edu	37	11	114278296	114278296	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016090.2	+1	provisional	p.R190C	1.000	152	0%	274	37.2%	22	45.4%	benign(0.08)	deleterious(0.01)	neutral(0.411)	NULL
BUD13	84811	genome.wustl.edu	37	11	116640871	116640871	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032725.3	-1	validated	p.E71*	1.000	276	0%	497	19.7%	6	16.6%	-	-	-	NULL
ZNF259	8882	genome.wustl.edu	37	11	116654314	116654314	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003904.3	-1	provisional	p.E305*	1.000	184	0%	307	31.6%	54	16.6%	-	-	-	HMMPfam_zf-ZPR1,HMMSmart_Zpr1
ZNF259	8882	genome.wustl.edu	37	11	116657731	116657731	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003904.3	-1	provisional	p.R126S	1.000	191	0%	262	35.9%	25	8%	benign(0.023)	tolerated(0.61)	neutral(0.005)	HMMPfam_zf-ZPR1,HMMSmart_Zpr1
APOA4	337	genome.wustl.edu	37	11	116691607	116691607	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000482.3	-1	reviewed	p.Q389H	0.002	59	0%	64	37.5%	0	-	unknown(0)	tolerated(0.05)	-	NULL
SIK3	23387	genome.wustl.edu	37	11	116732935	116732935	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025164.3	-1	validated	p.L632I	1.000	305	0%	584	35.6%	5	20%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	superfamily_Protein kinase-like (PK-like)
SIK3	23387	genome.wustl.edu	37	11	116767013	116767013	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025164.3	-1	validated	p.R216H	1.000	88	0%	155	27.7%	2	0%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PCSK7	9159	genome.wustl.edu	37	11	117100340	117100340	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004716.2	-1	reviewed	p.A74V	0.913	30	0%	47	29.8%	19	47.3%	possibly_damaging(0.643)	deleterious(0)	deleterious(0.670)	NULL
RNF214	257160	genome.wustl.edu	37	11	117110559	117110559	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077239.1	+1	validated	p.D221Y	1.000	132	0%	199	32.7%	16	31.2%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
CEP164	22897	genome.wustl.edu	37	11	117261929	117261929	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014956.4	+1	validated	p.E761*	0.994	47	0%	88	29.5%	7	14.2%	-	-	-	NULL
DSCAML1	57453	genome.wustl.edu	37	11	117375658	117375658	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020693.2	-1	provisional	p.V781	1.000	104	0%	126	38.1%	0	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
FXYD6	53826	genome.wustl.edu	37	11	117712733	117712733	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022003.2	-1	reviewed	p.K23N	1.000	185	0%	314	36%	4	0%	benign(0.034)	tolerated(0.37)	neutral(0.021)	HMMPfam_ATP1G1_PLM_MAT8
FXYD6	53826	genome.wustl.edu	37	11	117713433	117713433	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022003.2	-1	reviewed	e1+1	1.000	71	0%	52	40.4%	0	-	-	-	-	-
TMPRSS4	56649	genome.wustl.edu	37	11	117985920	117985920	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019894.3	+1	reviewed	p.D359	0.044	81	0%	137	29.9%	87	34.4%	-	-	-	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
SCN4B	6330	genome.wustl.edu	37	11	118007622	118007622	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_024527.1	-1	reviewed	NULL	0.528	59	0%	58	48.3%	0	-	-	-	-	-
SCN4B	6330	genome.wustl.edu	37	11	118015883	118015883	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174934.3	-1	reviewed	p.I41	0.999	107	0%	178	36%	0	-	-	-	-	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
CD3E	916	genome.wustl.edu	37	11	118184528	118184528	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000733.3	+1	reviewed	p.K153N	0.987	80	0%	94	45.7%	23	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CD3G	917	genome.wustl.edu	37	11	118221314	118221314	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000073.2	+1	reviewed	p.L119I	0.094	208	0%	439	35.5%	1	0%	benign(0)	tolerated(1)	-	NULL
UBE4A	9354	genome.wustl.edu	37	11	118245629	118245629	+	Missense_Mutation	SNP	G	G	A	rs34527432		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004788.2	+1	reviewed	p.E386K	1.000	75	0%	104	30.8%	9	33.3%	benign(0.139)	tolerated(0.06)	neutral(0.335)	HMMPfam_Ufd2P_core
TREH	11181	genome.wustl.edu	37	11	118533511	118533511	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000450700	-1	known	p.F47	0.000	34	0%	48	25%	0	-	-	-	-	NULL
UPK2	7379	genome.wustl.edu	37	11	118828923	118828923	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006760.3	+1	reviewed	p.A179S	1.000	49	0%	73	38.4%	0	-	benign(0.397)	tolerated(0.1)	neutral(0.414)	HMMPfam_Uroplakin_II
DPAGT1	1798	genome.wustl.edu	37	11	118971797	118971797	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001382.3	-1	reviewed	p.F71L	1.000	39	0%	90	37.8%	30	20%	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	NULL
C2CD2L	9854	genome.wustl.edu	37	11	118981996	118981996	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014807.3	+1	validated	p.M274I	0.003	156	0%	281	33.5%	38	36.8%	benign(0)	tolerated(0.3)	neutral(0.029)	superfamily_C2_CaLB
MFRP	83552	genome.wustl.edu	37	11	119216175	119216175	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031433.2	-1	reviewed	p.F199C	0.971	50	0%	96	29.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
MFRP	83552	genome.wustl.edu	37	11	119216629	119216629	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031433.2	-1	reviewed	p.A94V	0.928	80	0%	152	36.2%	0	-	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	NULL
LOC100130353	100130353	genome.wustl.edu	37	11	119274293	119274293	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_078444.1	+1	model	NULL	0.949	112	0%	120	32.5%	0	-	-	-	-	-
PVRL1	5818	genome.wustl.edu	37	11	119510641	119510641	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203285.1	-1	reviewed	p.A362V	0.000	35	0%	55	29.1%	0	-	benign(0.001)	tolerated(1)	-	NULL
TRIM29	23650	genome.wustl.edu	37	11	119986053	119986053	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012101.3	-1	reviewed	p.T566N	0.766	101	0%	165	18.2%	1	0%	probably_damaging(0.958)	deleterious(0.01)	deleterious(0.807)	NULL
ARHGEF12	23365	genome.wustl.edu	37	11	120319861	120319861	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015313.1	+1	reviewed	p.R594Q	1.000	81	0%	123	25.2%	7	71.4%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
GRIK4	2900	genome.wustl.edu	37	11	120690559	120690559	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014619.2	+1	reviewed	p.S147	1.000	153	0%	211	23.2%	0	-	-	-	-	HMMPfam_ANF_receptor,superfamily_SSF53822
TECTA	7007	genome.wustl.edu	37	11	120973417	120973417	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005422.2	+1	reviewed	p.F15V	1.000	189	0%	153	29.4%	0	-	benign(0)	tolerated(0.77)	neutral(0.001)	NULL
TECTA	7007	genome.wustl.edu	37	11	121028717	121028717	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005422.2	+1	reviewed	p.G1491	0.788	42	0%	50	38%	0	-	-	-	-	HMMPfam_VWD,HMMSmart_SM00216
BSX	390259	genome.wustl.edu	37	11	122852141	122852141	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098169.1	-1	validated	p.H80P	1.000	78	0%	158	29.1%	1	0%	benign(0.001)	tolerated(0.25)	neutral(0.037)	NULL
HSPA8	3312	genome.wustl.edu	37	11	122930609	122930609	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006597.3	-1	reviewed	p.E231A	1.000	72	0%	130	35.4%	550	55.6%	possibly_damaging(0.804)	deleterious(0)	deleterious(0.747)	HMMPfam_HSP70,superfamily_Actin-like ATPase domain
GRAMD1B	57476	genome.wustl.edu	37	11	123448102	123448102	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020716.1	+1	validated	p.T17	0.933	24	0%	31	35.5%	0	-	-	-	-	NULL
ZNF202	7753	genome.wustl.edu	37	11	123600393	123600393	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003455.2	-1	validated	p.S181	0.768	159	0%	172	32.6%	1	0%	-	-	-	NULL
OR6X1	390260	genome.wustl.edu	37	11	123624897	123624897	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005188.1	-1	provisional	p.F110L	0.001	245	0%	434	35%	0	-	possibly_damaging(0.81)	deleterious(0.01)	deleterious(0.711)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
OR6M1	390261	genome.wustl.edu	37	11	123676786	123676786	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005325.1	-1	provisional	p.S91Y	0.162	146	0%	146	30.1%	0	-	benign(0.405)	deleterious(0.01)	deleterious(0.536)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR6M1	390261	genome.wustl.edu	37	11	123676802	123676802	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005325.1	-1	provisional	p.E86K	0.007	157	0%	179	34.1%	0	-	benign(0.002)	tolerated(0.18)	neutral(0.056)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
TMEM225	338661	genome.wustl.edu	37	11	123754790	123754790	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013743.1	-1	provisional	p.S152Y	0.000	137	0%	99	25.3%	0	-	benign(0.045)	tolerated(0.51)	neutral(0.011)	NULL
OR4D5	219875	genome.wustl.edu	37	11	123811166	123811166	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001965.1	+1	provisional	p.M281I	0.897	107	0%	202	31.7%	0	-	benign(0)	tolerated(0.09)	neutral(0.296)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4D5	219875	genome.wustl.edu	37	11	123811220	123811220	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001965.1	+1	provisional	p.K299N	0.995	70	0%	108	31.5%	0	-	probably_damaging(0.991)	deleterious(0.03)	deleterious(0.808)	superfamily_Family A G protein-coupled receptor-like
OR10G4	390264	genome.wustl.edu	37	11	123887150	123887150	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004462.1	+1	provisional	p.R290I	1.000	195	0.5%	241	29.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF81321
VWA5A	4013	genome.wustl.edu	37	11	123994475	123994475	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130142.1	+1	validated	p.I376M	0.698	126	0%	156	32.7%	12	50%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
OR8G5	219865	genome.wustl.edu	37	11	124121033	124121033	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000341493	+1	known	p.A204V	0.000	377	0%	376	33.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR8G5	219865	genome.wustl.edu	37	11	124135375	124135375	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005198.1	+1	provisional	p.S218Y	0.001	310	0%	489	32.9%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR8G5	219865	genome.wustl.edu	37	11	124135654	124135654	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005198.1	+1	provisional	p.V311A	0.326	251	0%	284	26.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR8D2	283160	genome.wustl.edu	37	11	124189622	124189622	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002918.1	-1	provisional	p.V158F	0.000	122	0%	109	43.1%	0	-	possibly_damaging(0.819)	tolerated(0.1)	deleterious(0.596)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR8B8	26493	genome.wustl.edu	37	11	124310725	124310725	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012378.1	-1	provisional	p.V86G	0.656	215	0%	436	33.9%	0	-	possibly_damaging(0.864)	deleterious(0)	deleterious(0.779)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR8A1	390275	genome.wustl.edu	37	11	124440688	124440688	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005194.1	+1	provisional	p.L242I	0.990	168	0%	240	30%	0	-	possibly_damaging(0.758)	tolerated(0.09)	deleterious(0.577)	HMMPfam_7tm_1,superfamily_SSF81321
PANX3	116337	genome.wustl.edu	37	11	124489589	124489589	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052959.2	+1	reviewed	p.L313I	1.000	270	0%	396	31.3%	0	-	possibly_damaging(0.95)	tolerated(0.54)	neutral(0.401)	NULL
SIAE	54414	genome.wustl.edu	37	11	124509731	124509731	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170601.3	-1	validated	p.D333	0.004	131	0%	150	28.7%	7	42.8%	-	-	-	NULL
SIAE	54414	genome.wustl.edu	37	11	124530643	124530643	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170601.3	-1	validated	p.E96K	0.342	129	0%	233	34.3%	5	40%	benign(0)	tolerated(0.74)	neutral(0.002)	NULL
MSANTD2	79684	genome.wustl.edu	37	11	124637424	124637424	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024631.2	-1	validated	p.S391F	0.003	86	0%	124	35.5%	9	22.2%	benign(0.003)	deleterious(0.05)	neutral(0.345)	NULL
ROBO4	54538	genome.wustl.edu	37	11	124756589	124756589	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019055.5	-1	validated	p.V855	0.000	51	0%	82	36.6%	8	0%	-	-	-	NULL
CCDC15	80071	genome.wustl.edu	37	11	124824662	124824662	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025004.2	+1	validated	p.N12H	0.000	141	0%	238	31.1%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
CCDC15	80071	genome.wustl.edu	37	11	124856678	124856678	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025004.2	+1	validated	p.S265Y	0.016	112	0.9%	280	38.2%	1	0%	probably_damaging(0.991)	tolerated(0.06)	deleterious(0.766)	NULL
SLC37A2	219855	genome.wustl.edu	37	11	124951781	124951781	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198277.2	+1	validated	p.F288L	0.938	77	0%	118	31.4%	2	0%	benign(0.086)	tolerated(0.17)	neutral(0.066)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
STT3A	3703	genome.wustl.edu	37	11	125465872	125465872	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152713.3	+1	validated	p.L21P	1.000	293	0%	544	25%	95	28.4%	benign(0.208)	tolerated(0.11)	neutral(0.292)	HMMPfam_STT3
ACRV1	56	genome.wustl.edu	37	11	125548067	125548067	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001612.4	-1	reviewed	p.S60A	0.835	76	0%	90	31.1%	0	-	benign(0.021)	tolerated(0.39)	neutral(0.017)	NULL
PATE1	160065	genome.wustl.edu	37	11	125616252	125616252	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138294.2	+1	validated	e1+1	0.902	223	0%	156	32.7%	0	-	-	-	-	-
DDX25	29118	genome.wustl.edu	37	11	125780330	125780330	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013264.3	+1	reviewed	p.F193L	1.000	441	0%	802	36%	0	-	possibly_damaging(0.903)	deleterious(0)	deleterious(0.802)	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
CDON	50937	genome.wustl.edu	37	11	125891281	125891281	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016952.4	-1	validated	p.N71H	0.077	188	0%	207	33.3%	1	0%	probably_damaging(0.977)	tolerated(0.22)	neutral(0.461)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
FAM118B	79607	genome.wustl.edu	37	11	126110835	126110835	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024556.3	+1	validated	p.F79V	1.000	88	0%	120	26.7%	17	52.9%	probably_damaging(0.978)	tolerated(0.25)	neutral(0.457)	NULL
FOXRED1	55572	genome.wustl.edu	37	11	126146037	126146037	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017547.2	+1	provisional	p.I298	0.005	20	0%	32	28.1%	29	51.7%	-	-	-	HMMPfam_DAO,superfamily_FAD/NAD(P)-binding domain
KIRREL3	84623	genome.wustl.edu	37	11	126432806	126432806	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032531.3	-1	reviewed	p.E19	1.000	193	0%	233	30.9%	0	-	-	-	-	NULL
KCNJ5	3762	genome.wustl.edu	37	11	128781510	128781510	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000890.3	+1	reviewed	p.I114	1.000	187	0%	279	35.8%	1	0%	-	-	-	HMMPfam_IRK,superfamily_SSF81324
ARHGAP32	9743	genome.wustl.edu	37	11	128850515	128850515	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142685.1	-1	validated	p.E623K	1.000	184	0%	173	31.2%	1	0%	benign(0.221)	deleterious(0.05)	neutral(0.367)	NULL
BARX2	8538	genome.wustl.edu	37	11	129306882	129306882	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003658.4	+1	reviewed	p.E142K	1.000	54	0%	81	39.5%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
NFRKB	4798	genome.wustl.edu	37	11	129744065	129744065	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006165.3	-1	validated	p.S766L	0.160	218	0%	572	31.6%	7	57.1%	unknown(0)	deleterious(0.04)	-	NULL
NFRKB	4798	genome.wustl.edu	37	11	129755505	129755505	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006165.3	-1	validated	e4-1	1.000	46	0%	53	41.5%	4	100%	-	-	-	-
NFRKB	4798	genome.wustl.edu	37	11	129758685	129758685	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006165.3	-1	validated	p.E60D	1.000	79	0%	145	30.3%	5	20%	benign(0.001)	tolerated(0.67)	neutral(0.003)	NULL
PRDM10	56980	genome.wustl.edu	37	11	129784892	129784892	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020228.2	-1	reviewed	p.R854*	1.000	141	0.7%	246	34.1%	0	-	-	-	-	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZBTB44	29068	genome.wustl.edu	37	11	130131604	130131604	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014155.4	-1	validated	p.F55L	1.000	161	0%	188	34.6%	4	75%	possibly_damaging(0.94)	tolerated(0.05)	deleterious(0.730)	HMMSmart_BTB,superfamily_BTB/POZ_fold,HMMPfam_BTB
ADAMTS15	170689	genome.wustl.edu	37	11	130343213	130343213	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139055.2	+1	reviewed	p.L784I	1.000	22	0%	30	36.7%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_ADAM_spacer1
SNX19	399979	genome.wustl.edu	37	11	130749591	130749591	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014758.2	-1	validated	p.I925S	1.000	201	0%	263	30.8%	8	25%	possibly_damaging(0.914)	deleterious(0)	deleterious(0.810)	HMMPfam_Nexin_C
OPCML	4978	genome.wustl.edu	37	11	132204989	132204989	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000425719	+1	known	p.A206V	1.000	103	0%	91	37.4%	3	0%	-	-	-	NULL
LOC100128095	100128095	genome.wustl.edu	37	11	132813230	132813230	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343137.1	+1	model	p.S155Y	0.946	22	0%	17	29.4%	0	-	-	-	-	NULL
IGSF9B	22997	genome.wustl.edu	37	11	133790997	133790997	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014987.1	-1	validated	p.E875K	0.999	93	0%	91	41.8%	0	-	benign(0.243)	deleterious(0)	deleterious(0.469)	NULL
IGSF9B	22997	genome.wustl.edu	37	11	133791078	133791078	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014987.1	-1	validated	p.E848K	1.000	82	1.2%	86	73.3%	0	-	probably_damaging(0.977)	deleterious(0)	deleterious(0.863)	NULL
IGSF9B	22997	genome.wustl.edu	37	11	133795709	133795709	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014987.1	-1	validated	p.V653	0.008	68	0%	105	31.4%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
NCAPD3	23310	genome.wustl.edu	37	11	134054820	134054820	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015261.2	-1	validated	p.K771	0.019	164	0%	239	28.5%	14	42.8%	-	-	-	superfamily_ARM-type_fold
VPS26B	112936	genome.wustl.edu	37	11	134109908	134109908	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052875.3	+1	validated	p.S135N	1.000	130	0%	219	32.9%	27	44.4%	benign(0.002)	tolerated(0.56)	neutral(0.006)	HMMPfam_Vps26
VPS26B	112936	genome.wustl.edu	37	11	134115410	134115410	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052875.3	+1	validated	p.R313C	1.000	84	0%	106	29.2%	56	32.1%	probably_damaging(0.994)	tolerated(0.1)	deleterious(0.738)	NULL
GLB1L3	112937	genome.wustl.edu	37	11	134180494	134180494	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080407.2	+1	validated	p.D377N	0.994	126	0%	136	34.6%	0	-	probably_damaging(0.995)	tolerated(0.12)	deleterious(0.718)	HMMPfam_Glyco_hydro_35
GLB1L2	89944	genome.wustl.edu	37	11	134234254	134234254	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138342.3	+1	validated	p.E256K	0.703	217	0%	265	33.6%	19	36.8%	benign(0)	tolerated(1)	-	HMMPfam_Glyco_hydro_35,superfamily_Glyco_hydro_cat
SLC6A12	6539	genome.wustl.edu	37	12	301665	301665	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122847.1	-1	validated	p.K560N	0.869	83	0%	203	28.1%	0	-	benign(0.01)	tolerated(0.2)	neutral(0.050)	HMMPfam_SNF
SLC6A13	6540	genome.wustl.edu	37	12	335629	335629	+	Silent	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016615.2	-1	provisional	p.G329	0.810	74	0%	138	44.9%	0	-	-	-	-	HMMPfam_SNF
SLC6A13	6540	genome.wustl.edu	37	12	369007	369007	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000436453	-1	known	p.R71I	0.530	140	0%	148	42.6%	0	-	benign(0)	tolerated(0.09)	neutral(0.296)	NULL
KDM5A	5927	genome.wustl.edu	37	12	422312	422312	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042603.1	-1	reviewed	p.K982N	1.000	187	0%	287	32.1%	3	33.3%	benign(0.024)	tolerated(0.19)	neutral(0.051)	HMMPfam_PLU-1
KDM5A	5927	genome.wustl.edu	37	12	431664	431664	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042603.1	-1	reviewed	p.R782Q	1.000	106	0%	150	29.3%	7	14.2%	benign(0.133)	tolerated(1)	neutral(0.011)	HMMPfam_PLU-1
KDM5A	5927	genome.wustl.edu	37	12	493224	493224	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042603.1	-1	reviewed	p.K113N	1.000	155	0%	249	35.7%	1	100%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like
B4GALNT3	283358	genome.wustl.edu	37	12	657444	657444	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173593.3	+1	validated	p.L278	0.001	146	0%	244	29.5%	31	51.6%	-	-	-	NULL
B4GALNT3	283358	genome.wustl.edu	37	12	662507	662507	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173593.3	+1	validated	p.R473Q	0.553	24	0%	51	35.3%	19	42.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
B4GALNT3	283358	genome.wustl.edu	37	12	666859	666859	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173593.3	+1	validated	p.I822	1.000	46	2.2%	103	25.2%	30	33.3%	-	-	-	superfamily_Nucleotide-diphospho-sugar transferases
WNK1	65125	genome.wustl.edu	37	12	922977	922977	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018979.3	+1	reviewed	p.K310R	1.000	168	0%	271	31.7%	4	0%	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	superfamily_Kinase_like,HMMPfam_Pkinase
WNK1	65125	genome.wustl.edu	37	12	989900	989900	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018979.3	+1	reviewed	p.R949Q	1.000	75	0%	163	38.7%	6	16.6%	unknown(0)	tolerated(0.28)	-	NULL
WNK1	65125	genome.wustl.edu	37	12	994397	994397	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018979.3	+1	reviewed	p.S1476Y	0.976	89	0%	87	34.5%	14	35.7%	unknown(0)	deleterious(0.03)	-	NULL
WNK1	65125	genome.wustl.edu	37	12	994538	994538	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018979.3	+1	reviewed	p.V1523A	1.000	72	0%	107	42.1%	20	55%	unknown(0)	tolerated(0.16)	-	NULL
WNK1	65125	genome.wustl.edu	37	12	1005274	1005274	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018979.3	+1	reviewed	p.K1874R	0.777	146	0%	169	29.6%	16	62.5%	unknown(0)	tolerated(0.11)	-	NULL
WNT5B	81029	genome.wustl.edu	37	12	1748903	1748903	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030775.2	+1	reviewed	p.A128T	1.000	16	0%	25	36%	1	0%	benign(0.17)	tolerated(0.13)	neutral(0.268)	HMMPfam_wnt,HMMSmart_SM00097
CACNA2D4	93589	genome.wustl.edu	37	12	1919734	1919734	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172364.4	-1	reviewed	p.P878L	0.003	73	0%	102	32.4%	0	-	benign(0)	tolerated(0.25)	neutral(0.037)	NULL
CACNA2D4	93589	genome.wustl.edu	37	12	1993438	1993438	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172364.4	-1	reviewed	p.R441H	0.789	141	0.7%	262	29.4%	0	-	probably_damaging(0.987)	deleterious(0.04)	deleterious(0.785)	HMMSmart_SM00327,superfamily_vWA-like
CACNA1C	775	genome.wustl.edu	37	12	2224610	2224610	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199460.2	+1	reviewed	p.K90N	1.000	17	0%	12	58.3%	1	0%	benign(0.304)	deleterious(0.03)	neutral(0.459)	NULL
CACNA1C	775	genome.wustl.edu	37	12	2692013	2692013	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199460.2	+1	reviewed	p.S710L	1.000	190	0%	297	39.4%	1	0%	possibly_damaging(0.621)	tolerated(0.2)	neutral(0.266)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1C	775	genome.wustl.edu	37	12	2715777	2715777	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199460.2	+1	reviewed	p.G1073*	1.000	190	0%	267	33%	1	0%	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1C	775	genome.wustl.edu	37	12	2717753	2717753	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199460.2	+1	reviewed	p.F1165V	1.000	365	0.3%	522	28.5%	0	-	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
LOC100288472	100288472	genome.wustl.edu	37	12	2896136	2896136	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343142.1	-1	model	p.E129	1.000	37	0%	39	23.1%	0	-	-	-	-	HMMPfam_Chromo_shadow,superfamily_Chromo domain-like,HMMSmart_SM00300
PARP11	57097	genome.wustl.edu	37	12	3931047	3931047	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020367.4	-1	validated	p.F180L	1.000	151	0%	158	27.2%	2	50%	possibly_damaging(0.535)	tolerated(0.38)	neutral(0.199)	HMMPfam_PARP,superfamily_ADP-ribosylation
ENSG00000118976	0	genome.wustl.edu	37	12	3949254	3949254	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000237841	+1	known	p.I263L	0.998	239	0%	297	30.3%	0	-	-	-	-	NULL
ENSG00000118976	0	genome.wustl.edu	37	12	3949670	3949670	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000237841	+1	known	p.Q401H	0.979	291	0%	542	32.8%	0	-	-	-	-	NULL
C12orf4	57102	genome.wustl.edu	37	12	4626310	4626310	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020374.2	-1	predicted	p.R360Q	0.030	192	0%	206	20.4%	2	0%	benign(0.003)	tolerated(0.71)	neutral(0.002)	HMMPfam_DUF2362
C12orf4	57102	genome.wustl.edu	37	12	4627253	4627253	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020374.2	-1	predicted	p.R335Q	1.000	175	0%	178	29.8%	1	0%	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	HMMPfam_DUF2362
C12orf4	57102	genome.wustl.edu	37	12	4627349	4627349	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020374.2	-1	predicted	p.R303I	1.000	144	0%	207	33.3%	3	66.6%	possibly_damaging(0.918)	tolerated(0.39)	neutral(0.385)	HMMPfam_DUF2362
DYRK4	8798	genome.wustl.edu	37	12	4705881	4705881	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003845.1	+1	provisional	p.T182	1.000	355	0%	476	34.9%	0	-	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
AKAP3	10566	genome.wustl.edu	37	12	4736269	4736269	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006422.2	-1	reviewed	p.N600S	1.000	49	0%	63	17.5%	0	-	possibly_damaging(0.896)	tolerated(0.1)	deleterious(0.640)	HMMPfam_AKAP_110,HMMSmart_SM00807
GALNT8	26290	genome.wustl.edu	37	12	4854616	4854616	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017417.1	+1	reviewed	p.R294	0.855	130	0%	162	34%	0	-	-	-	-	HMMPfam_Glycos_transf_2,superfamily_SSF53448
KCNA6	3742	genome.wustl.edu	37	12	4919885	4919885	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002235.3	+1	reviewed	p.E226D	0.392	82	0%	139	20.9%	0	-	benign(0.008)	tolerated(0.78)	neutral(0.001)	superfamily_SSF81324
KCNA1	3736	genome.wustl.edu	37	12	5021267	5021267	+	Silent	SNP	C	C	T	rs147731985		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000217.2	+1	reviewed	p.F241	1.000	49	0%	103	27.2%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_SSF81324
LOC390282	390282	genome.wustl.edu	37	12	5141820	5141820	+	Silent	SNP	G	G	A	rs191378000	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_372447.5	-1	model	p.F92	0.999	52	0%	86	51.2%	0	-	-	-	-	NULL
LOC390282	390282	genome.wustl.edu	37	12	5141828	5141828	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_372447.5	-1	model	p.D90N	0.994	46	0%	82	25.6%	0	-	-	-	-	NULL
ANO2	57101	genome.wustl.edu	37	12	5685037	5685037	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020373.2	-1	validated	p.E862*	0.815	159	0%	209	36.4%	0	-	-	-	-	HMMPfam_DUF590
ANO2	57101	genome.wustl.edu	37	12	5708795	5708795	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020373.2	-1	validated	p.P696	1.000	212	0%	202	27.2%	0	-	-	-	-	HMMPfam_DUF590
ANO2	57101	genome.wustl.edu	37	12	6031939	6031939	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020373.2	-1	validated	p.R14	1.000	45	2.2%	85	37.6%	0	-	-	-	-	NULL
VWF	7450	genome.wustl.edu	37	12	6135142	6135142	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000552.3	-1	reviewed	p.Q1013R	1.000	191	0%	248	34.7%	18	0%	probably_damaging(0.983)	deleterious(0.04)	deleterious(0.778)	HMMPfam_VWD
VWF	7450	genome.wustl.edu	37	12	6138654	6138654	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000552.3	-1	reviewed	p.V941L	1.000	92	0%	123	43.9%	10	0%	possibly_damaging(0.902)	deleterious(0.02)	deleterious(0.740)	HMMPfam_VWD,HMMSmart_SM00216
PLEKHG6	55200	genome.wustl.edu	37	12	6425463	6425463	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144856.1	+1	validated	p.R217*	0.983	100	0%	140	22.1%	2	50%	-	-	-	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
TNFRSF1A	7132	genome.wustl.edu	37	12	6443013	6443013	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001065.2	-1	reviewed	p.D71G	0.961	126	0%	170	13.5%	49	8.1%	probably_damaging(0.999)	tolerated(0.05)	deleterious(0.836)	HMMPfam_TNFR_c6,HMMSmart_SM00208,PatternScan_TNFR_NGFR_1,superfamily_TNF receptor-like
LOC678655	678655	genome.wustl.edu	37	12	6559871	6559871	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_015382.1	-1	predicted	NULL	0.272	69	0%	105	39%	0	-	-	-	-	-
TAPBPL	55080	genome.wustl.edu	37	12	6570096	6570096	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018009.4	+1	validated	p.R428K	0.892	124	0%	204	34.8%	11	0%	possibly_damaging(0.653)	tolerated(0.12)	deleterious(0.490)	NULL
NCAPD2	9918	genome.wustl.edu	37	12	6619852	6619852	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014865.3	+1	validated	p.G107E	0.000	122	0%	208	34.1%	11	45.4%	benign(0.03)	tolerated(0.6)	neutral(0.006)	NULL
CHD4	1108	genome.wustl.edu	37	12	6701981	6701981	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001273.2	-1	reviewed	p.F885L	1.000	94	0%	189	32.8%	31	29%	probably_damaging(0.988)	tolerated(0.44)	neutral(0.450)	HMMPfam_SNF2_N,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
LPAR5	57121	genome.wustl.edu	37	12	6729295	6729295	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000435659	-1	known	e2-2	0.006	15	0%	37	35.1%	0	-	-	-	-	-
ACRBP	84519	genome.wustl.edu	37	12	6753398	6753398	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032489.2	-1	reviewed	p.E283D	0.999	137	0%	307	32.2%	0	-	possibly_damaging(0.891)	deleterious(0.05)	deleterious(0.696)	NULL
COPS7A	50813	genome.wustl.edu	37	12	6838453	6838453	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016319.2	+1	validated	p.R123H	0.620	162	0%	329	29.5%	58	25.8%	benign(0.017)	tolerated(0.08)	neutral(0.300)	HMMPfam_PCI,HMMSmart_SM00088
LEPREL2	10536	genome.wustl.edu	37	12	6943151	6943151	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000290510	+1	known	p.R465W	0.997	161	0%	218	32.1%	13	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00702
LRRC23	10233	genome.wustl.edu	37	12	7019121	7019121	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135217.1	+1	validated	p.R230Q	1.000	110	0%	206	38.3%	20	55%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00365,superfamily_L domain-like
LPCAT3	10162	genome.wustl.edu	37	12	7090169	7090169	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005768.5	-1	validated	p.N225S	1.000	91	0%	186	30.1%	116	44.8%	benign(0.004)	tolerated(0.84)	neutral(0.001)	HMMPfam_MBOAT
C1S	716	genome.wustl.edu	37	12	7173855	7173855	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001734.3	+1	reviewed	p.S302Y	0.926	257	0%	402	21.6%	89	1.1%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
C1S	716	genome.wustl.edu	37	12	7174372	7174372	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001734.3	+1	reviewed	p.S339	0.860	225	0%	365	36.2%	103	1.9%	-	-	-	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
C1S	716	genome.wustl.edu	37	12	7177895	7177895	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001734.3	+1	reviewed	p.K669N	0.884	46	0%	74	28.4%	211	0.4%	benign(0.119)	tolerated(0.35)	neutral(0.030)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
CLSTN3	9746	genome.wustl.edu	37	12	7288849	7288849	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014718.3	+1	validated	p.L264V	0.779	136	0%	165	36.4%	44	43.1%	possibly_damaging(0.854)	tolerated(0.08)	deleterious(0.629)	NULL
CD163	9332	genome.wustl.edu	37	12	7633660	7633660	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000432237	-1	known	p.S1147Y	0.000	50	0%	23	26.1%	0	-	-	-	-	NULL
APOBEC1	339	genome.wustl.edu	37	12	7805368	7805368	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001644.3	-1	reviewed	p.A36	0.991	12	0%	27	59.3%	0	-	unknown(0)	-	-	HMMPfam_APOBEC_N
APOBEC1	339	genome.wustl.edu	37	12	7805379	7805379	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001644.3	-1	reviewed	p.R33C	0.145	12	0%	23	21.7%	0	-	benign(0.001)	tolerated(0.08)	neutral(0.300)	HMMPfam_APOBEC_N
GDF3	9573	genome.wustl.edu	37	12	7848153	7848153	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020634.1	-1	reviewed	p.R58C	0.019	68	0%	118	36.4%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
GDF3	9573	genome.wustl.edu	37	12	7848274	7848274	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020634.1	-1	reviewed	p.A17	0.001	44	0%	68	36.8%	0	-	-	-	-	NULL
LOC360030	360030	genome.wustl.edu	37	12	7923088	7923088	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145465.1	+1	provisional	p.K163N	0.000	74	0%	143	20.3%	0	-	benign(0.002)	deleterious(0)	neutral(0.445)	NULL
SLC2A14	144195	genome.wustl.edu	37	12	7984288	7984288	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153449.2	-1	provisional	p.N85H	0.000	110	0%	271	31.4%	0	-	benign(0.041)	tolerated(0.53)	neutral(0.010)	HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter
NANOGP1	404635	genome.wustl.edu	37	12	8048239	8048239	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000316043	+1	known	p.Q49H	0.954	24	0%	74	40.5%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
SLC2A3	6515	genome.wustl.edu	37	12	8083102	8083102	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006931.2	-1	validated	p.R216I	0.990	149	0%	267	31.1%	13	0%	benign(0.148)	deleterious(0.01)	neutral(0.419)	HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter
CLEC4D	338339	genome.wustl.edu	37	12	8667865	8667865	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080387.4	+1	reviewed	p.S21L	0.138	327	0.3%	513	34.5%	0	-	benign(0)	tolerated(0.19)	neutral(0.050)	NULL
MFAP5	8076	genome.wustl.edu	37	12	8800752	8800752	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003480.2	-1	reviewed	p.R153C	0.898	153	0%	257	32.7%	30	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
A2ML1	144568	genome.wustl.edu	37	12	8976426	8976426	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144670.3	+1	validated	p.G119	0.043	93	0%	184	34.2%	1	0%	-	-	-	HMMPfam_A2M_N
A2ML1	144568	genome.wustl.edu	37	12	8988858	8988858	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144670.3	+1	validated	p.P217	0.992	334	0%	669	30.5%	0	-	-	-	-	HMMPfam_A2M_N
A2ML1	144568	genome.wustl.edu	37	12	9006811	9006811	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144670.3	+1	validated	p.R893Q	0.000	107	0%	212	32.5%	0	-	benign(0.001)	tolerated(0.12)	neutral(0.261)	NULL
A2ML1	144568	genome.wustl.edu	37	12	9008104	9008104	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144670.3	+1	validated	e23-1	0.998	117	0%	218	29.8%	0	-	-	-	-	-
A2ML1	144568	genome.wustl.edu	37	12	9013766	9013766	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144670.3	+1	validated	p.K1125N	0.002	171	0%	285	29.1%	0	-	benign(0.13)	tolerated(0.08)	neutral(0.311)	superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_comp
PHC1	1911	genome.wustl.edu	37	12	9085340	9085340	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004426.2	+1	reviewed	p.Q429	0.986	361	0.6%	518	21.4%	7	0%	-	-	-	NULL
A2M	2	genome.wustl.edu	37	12	9223111	9223111	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000014.4	-1	reviewed	p.F1389	1.000	129	0%	187	39.6%	1031	0%	-	-	-	HMMPfam_A2M_recep,superfamily_Alpha-macroglobulin receptor domain
A2M	2	genome.wustl.edu	37	12	9227195	9227195	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000014.4	-1	reviewed	p.T1239	0.060	183	0%	227	33%	441	0%	-	-	-	superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_comp
A2M	2	genome.wustl.edu	37	12	9265016	9265016	+	Silent	SNP	G	G	T	rs56202499	byCluster;byFrequency;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000014.4	-1	reviewed	p.V129	0.931	211	0%	206	22.8%	70	0%	-	-	-	HMMPfam_A2M_N
A2M	2	genome.wustl.edu	37	12	9268409	9268409	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000014.4	-1	reviewed	p.L13I	0.489	153	0%	154	31.2%	63	0%	probably_damaging(0.955)	tolerated(0.34)	neutral(0.422)	PatternScan_TONB_DEPENDENT_REC_1
PZP	5858	genome.wustl.edu	37	12	9322180	9322180	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002864.2	-1	validated	p.N616T	0.129	94	0%	177	27.7%	0	-	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	NULL
KLRF1	51348	genome.wustl.edu	37	12	9985996	9985996	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016523.1	+1	provisional	p.R94S	0.077	177	0%	173	35.3%	0	-	possibly_damaging(0.83)	deleterious(0)	deleterious(0.760)	NULL
CLEC2B	9976	genome.wustl.edu	37	12	10010218	10010218	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005127.2	-1	reviewed	p.S31Y	0.000	121	0%	79	38%	15	0%	benign(0.312)	deleterious(0.02)	deleterious(0.481)	superfamily_C-type lectin-like
CLEC12A	160364	genome.wustl.edu	37	12	10132004	10132004	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138337.5	+1	reviewed	p.R87I	0.022	138	0%	79	30.4%	0	-	probably_damaging(0.996)	tolerated(0.07)	deleterious(0.780)	NULL
CLEC7A	64581	genome.wustl.edu	37	12	10279257	10279257	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_197947.2	-1	reviewed	p.L85I	0.000	325	0%	404	35.1%	1	0%	unknown(0)	-	-	NULL
CLEC7A	64581	genome.wustl.edu	37	12	10280284	10280284	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000422474	-1	known	p.R88	0.000	73	0%	149	28.2%	0	-	-	-	-	NULL
C12orf59	120939	genome.wustl.edu	37	12	10342608	10342608	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153022.2	+1	validated	p.A121T	1.000	63	0%	170	31.8%	0	-	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
KLRC2	3822	genome.wustl.edu	37	12	10588453	10588453	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002260.3	-1	reviewed	p.L45I	0.032	390	0.3%	369	44.7%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
KLRC1	3821	genome.wustl.edu	37	12	10603610	10603610	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002259.4	-1	reviewed	p.S49Y	0.003	415	0.2%	641	35.3%	0	-	possibly_damaging(0.949)	deleterious(0)	deleterious(0.838)	NULL
ENSG00000180574	0	genome.wustl.edu	37	12	10658907	10658907	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000322446	+1	known	p.P136T	1.000	298	0%	443	29.6%	14	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GTP_EFTU,superfamily_P-loop containing nucleoside triphosphate hydrolases
TAS2R7	50837	genome.wustl.edu	37	12	10954379	10954379	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023919.2	-1	reviewed	p.E264G	0.758	219	0%	197	33%	0	-	possibly_damaging(0.758)	deleterious(0.01)	deleterious(0.686)	HMMPfam_TAS2R,superfamily_SSF81321
TAS2R8	50836	genome.wustl.edu	37	12	10959364	10959364	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023918.1	-1	reviewed	p.N72	0.001	207	0%	158	32.9%	0	-	-	-	-	HMMPfam_TAS2R,superfamily_SSF81321
TAS2R10	50839	genome.wustl.edu	37	12	10978034	10978034	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023921.1	-1	reviewed	p.L279I	0.992	166	0%	131	26%	1	100%	probably_damaging(0.998)	tolerated(0.11)	deleterious(0.746)	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like
TAS2R10	50839	genome.wustl.edu	37	12	10978514	10978514	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023921.1	-1	reviewed	p.L119I	0.998	92	0%	37	29.7%	0	-	probably_damaging(0.992)	deleterious(0.05)	deleterious(0.793)	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like
PRH1	5554	genome.wustl.edu	37	12	11034971	11034971	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006250.2	-1	provisional	p.R122*	0.000	362	0%	505	18.6%	1	0%	-	-	-	NULL
TAS2R14	50840	genome.wustl.edu	37	12	11091457	11091457	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023922.1	-1	reviewed	p.S117Y	0.000	78	0%	60	25%	0	-	benign(0.418)	tolerated(0.65)	neutral(0.139)	HMMPfam_TAS2R,superfamily_SSF81321
TAS2R14	50840	genome.wustl.edu	37	12	11091679	11091679	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023922.1	-1	reviewed	p.S43L	0.000	101	0%	103	30.1%	0	-	benign(0)	tolerated(0.16)	neutral(0.059)	HMMPfam_TAS2R,superfamily_SSF81321
TAS2R20	259295	genome.wustl.edu	37	12	11149894	11149894	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176889.2	-1	validated	p.S194Y	0.004	300	0%	273	31.1%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_TAS2R,superfamily_SSF81321
TAS2R46	259292	genome.wustl.edu	37	12	11214444	11214444	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176887.2	-1	validated	p.N150	0.001	309	0%	299	27.8%	0	-	-	-	-	HMMPfam_TAS2R,superfamily_SSF81321
TAS2R43	259289	genome.wustl.edu	37	12	11244768	11244768	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176884.2	-1	provisional	p.N21H	0.224	7	0.000	13	0.462	0	-	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_TAS2R,superfamily_Family A G protein-coupled receptor-like
PRB2	653247	genome.wustl.edu	37	12	11546213	11546213	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006248.3	-1	validated	p.P267S	0.801	314	0%	592	18.8%	0	-	unknown(0)	tolerated(0.79)	-	NULL
PRB2	653247	genome.wustl.edu	37	12	11546500	11546500	+	Missense_Mutation	SNP	C	C	T	rs192416830	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006248.3	-1	validated	p.R171Q	0.069	291	0.3%	537	37.6%	0	-	unknown(0)	tolerated(0.62)	-	NULL
LRP6	4040	genome.wustl.edu	37	12	12283824	12283824	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002336.2	-1	reviewed	p.L1325R	0.996	73	0%	90	41.1%	3	0%	benign(0.001)	tolerated(0.09)	neutral(0.296)	HMMPfam_Ldl_recept_a,HMMSmart_SM00192,superfamily_LDL receptor-like module
LRP6	4040	genome.wustl.edu	37	12	12334356	12334356	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002336.2	-1	reviewed	p.L332I	1.000	48	0%	94	43.6%	1	0%	probably_damaging(0.987)	tolerated(0.16)	deleterious(0.496)	superfamily_EGF/Laminin,superfamily_YWTD domain
LRP6	4040	genome.wustl.edu	37	12	12334365	12334365	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002336.2	-1	reviewed	p.E329*	1.000	41	0%	83	34.9%	1	100%	-	-	-	superfamily_EGF/Laminin,superfamily_YWTD domain
KIAA1467	57613	genome.wustl.edu	37	12	13221338	13221338	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020853.1	+1	validated	p.N415H	0.985	125	0%	144	34.7%	3	66.6%	possibly_damaging(0.843)	deleterious(0.02)	deleterious(0.706)	NULL
GSG1	83445	genome.wustl.edu	37	12	13256440	13256440	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080555.1	-1	validated	p.D3Y	0.105	272	0%	456	33.1%	0	-	possibly_damaging(0.92)	-	-	NULL
GRIN2B	2904	genome.wustl.edu	37	12	13906797	13906797	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000834.3	-1	reviewed	p.S155Y	0.980	83	0%	100	38%	0	-	probably_damaging(0.982)	deleterious(0.04)	deleterious(0.775)	superfamily_SSF53822
ATF7IP	55729	genome.wustl.edu	37	12	14576892	14576892	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018179.3	+1	validated	p.R15*	1.000	71	0%	116	31%	7	100%	-	-	-	NULL
ATF7IP	55729	genome.wustl.edu	37	12	14578317	14578317	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018179.3	+1	validated	p.E490*	1.000	48	0%	61	27.9%	8	0%	-	-	-	NULL
ATF7IP	55729	genome.wustl.edu	37	12	14589067	14589067	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018179.3	+1	validated	p.K558T	1.000	162	0%	300	27.7%	10	20%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	NULL
GUCY2C	2984	genome.wustl.edu	37	12	14840961	14840961	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004963.3	-1	validated	p.S85L	0.021	102	0%	112	35.7%	0	-	benign(0.183)	tolerated(0.35)	neutral(0.038)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
H2AFJ	55766	genome.wustl.edu	37	12	14927761	14927761	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000228929	+1	known	e1+2	1.000	73	0%	106	26.4%	553	39.2%	-	-	-	-
C12orf60	144608	genome.wustl.edu	37	12	14976123	14976123	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175874.3	+1	validated	p.S85F	0.016	161	0%	189	25.9%	2	50%	possibly_damaging(0.745)	deleterious(0.01)	deleterious(0.679)	NULL
C12orf60	144608	genome.wustl.edu	37	12	14976265	14976265	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175874.3	+1	validated	p.I132	0.022	176	0%	195	28.2%	5	40%	-	-	-	NULL
PTPRO	5800	genome.wustl.edu	37	12	15656964	15656964	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030667.1	+1	reviewed	p.R410*	1.000	131	0%	114	22.8%	1	0%	-	-	-	NULL
PTPRO	5800	genome.wustl.edu	37	12	15699583	15699583	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030667.1	+1	reviewed	p.A749S	1.000	337	0%	291	25.1%	0	-	benign(0.167)	deleterious(0.01)	neutral(0.421)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
PTPRO	5800	genome.wustl.edu	37	12	15747947	15747947	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030667.1	+1	reviewed	p.V1208D	1.000	193	0%	232	31.5%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
EPS8	2059	genome.wustl.edu	37	12	15774354	15774354	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004447.5	-1	reviewed	p.G789V	0.999	200	0%	128	33.6%	10	30%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
EPS8	2059	genome.wustl.edu	37	12	15818732	15818732	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004447.5	-1	reviewed	p.R232*	1.000	37	0%	47	48.9%	5	0%	-	-	-	NULL
SLC15A5	729025	genome.wustl.edu	37	12	16392736	16392736	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000344941	-1	known	p.P347	0.238	139	0%	209	31.1%	0	-	-	-	-	HMMPfam_PTR2
PLCZ1	89869	genome.wustl.edu	37	12	18837079	18837079	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033123.2	-1	provisional	p.L576I	0.856	196	0%	118	42.4%	0	-	possibly_damaging(0.872)	deleterious(0.04)	deleterious(0.688)	HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
PLCZ1	89869	genome.wustl.edu	37	12	18841027	18841027	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033123.2	-1	provisional	p.K529N	0.976	230	0%	132	32.6%	0	-	benign(0)	tolerated(1)	-	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
PLCZ1	89869	genome.wustl.edu	37	12	18854538	18854538	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000447925	-1	known	p.K87T	0.001	401	0%	321	37.7%	0	-	unknown(0)	tolerated(0.57)	-	superfamily_PLC-like_Pdiesterase_TIM-brl
PLEKHA5	54477	genome.wustl.edu	37	12	19427589	19427589	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019012.3	+1	validated	p.E323*	1.000	171	0%	348	32.5%	15	20%	-	-	-	NULL
ENSG00000248116	0	genome.wustl.edu	37	12	19459843	19459843	+	RNA	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000510738	+1	novel	NULL	1.000	151	0%	270	24.4%	2	50%	-	-	-	-
ENSG00000248116	0	genome.wustl.edu	37	12	19460751	19460751	+	RNA	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000510738	+1	novel	NULL	0.991	48	0%	110	23.6%	8	50%	-	-	-	-
PDE3A	5139	genome.wustl.edu	37	12	20803484	20803484	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000921.3	+1	validated	p.E959*	1.000	260	0%	353	28.9%	4	25%	-	-	-	HMMPfam_PDEase_I,HMMSmart_HDc,superfamily_SSF109604
SLCO1C1	53919	genome.wustl.edu	37	12	20896300	20896300	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017435.4	+1	reviewed	p.L599I	1.000	442	0%	518	35.5%	0	-	probably_damaging(0.97)	deleterious(0.01)	deleterious(0.818)	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter
SLCO1C1	53919	genome.wustl.edu	37	12	20905318	20905318	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000381552	+1	known	p.E700*	1.000	104	0%	114	27.2%	0	-	-	-	-	NULL
SLCO1B3	28234	genome.wustl.edu	37	12	21008099	21008099	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019844.2	+1	validated	p.E74D	1.000	263	0%	221	29%	2	100%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter
SLCO1B3	28234	genome.wustl.edu	37	12	21032374	21032374	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019844.2	+1	validated	p.I380	0.000	106	0%	121	21.5%	1	0%	-	-	-	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter
SLCO1B3	28234	genome.wustl.edu	37	12	21036398	21036398	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019844.2	+1	validated	p.R515I	0.000	301	0%	270	33.7%	1	0%	benign(0.064)	tolerated(0.12)	neutral(0.265)	HMMPfam_OATP,superfamily_MFS_gen_substrate_transporter
LST-3TM12	338821	genome.wustl.edu	37	12	21205079	21205079	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009562.4	+1	validated	p.S414A	1.000	283	0%	154	26%	0	-	probably_damaging(1)	tolerated(0.24)	deleterious(0.537)	HMMPfam_OATP,superfamily_MFS general substrate transporter,superfamily_Kazal-type serine protease inhibitors
LST-3TM12	338821	genome.wustl.edu	37	12	21205160	21205160	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009562.4	+1	validated	p.G441*	1.000	276	0%	130	28.5%	0	-	-	-	-	HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS general substrate transporter,superfamily_Kazal-type serine protease inhibitors
SLCO1B1	10599	genome.wustl.edu	37	12	21370150	21370150	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006446.4	+1	reviewed	p.R532M	0.010	270	0%	343	35.6%	0	-	benign(0.398)	tolerated(0.16)	neutral(0.188)	HMMPfam_OATP,superfamily_MFS general substrate transporter
SLCO1B1	10599	genome.wustl.edu	37	12	21391945	21391945	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006446.4	+1	reviewed	p.R633I	0.008	66	0%	51	45.1%	0	-	benign(0.004)	tolerated(0.07)	neutral(0.319)	superfamily_MFS general substrate transporter
SLCO1A2	6579	genome.wustl.edu	37	12	21457469	21457469	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021094.3	-1	reviewed	p.V161I	1.000	109	0%	94	21.3%	0	-	possibly_damaging(0.935)	tolerated(0.06)	deleterious(0.703)	HMMPfam_OATP,superfamily_MFS general substrate transporter
SLCO1A2	6579	genome.wustl.edu	37	12	21467607	21467607	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021094.3	-1	reviewed	p.L71	1.000	145	0%	148	40.5%	0	-	-	-	-	HMMPfam_OATP,superfamily_MFS general substrate transporter
RECQL	5965	genome.wustl.edu	37	12	21636315	21636315	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002907.3	-1	reviewed	p.R232I	1.000	185	0%	195	29.2%	14	28.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
GOLT1B	51026	genome.wustl.edu	37	12	21661320	21661320	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016072.4	+1	validated	p.L41V	0.998	620	0%	601	31.6%	17	47%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Got1
KCNJ8	3764	genome.wustl.edu	37	12	21918742	21918742	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004982.2	-1	reviewed	p.S397Y	1.000	277	0%	362	32.6%	3	0%	benign(0.282)	deleterious(0.05)	neutral(0.432)	NULL
ABCC9	10060	genome.wustl.edu	37	12	21958235	21958235	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005691.2	-1	reviewed	p.S1508Y	1.000	197	0%	292	33.9%	0	-	benign(0.352)	deleterious(0.01)	deleterious(0.517)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCC9	10060	genome.wustl.edu	37	12	22017400	22017400	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005691.2	-1	reviewed	p.S737F	1.000	111	0%	81	39.5%	0	-	benign(0.147)	deleterious(0.02)	neutral(0.396)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIAA0528	9847	genome.wustl.edu	37	12	22635534	22635534	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014802.1	-1	predicted	p.R565I	1.000	364	0%	334	31.4%	4	50%	probably_damaging(0.976)	deleterious(0)	deleterious(0.863)	NULL
KIAA0528	9847	genome.wustl.edu	37	12	22635662	22635662	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014802.1	-1	predicted	p.K522N	1.000	316	0%	304	38.5%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SOX5	6660	genome.wustl.edu	37	12	23687402	23687402	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006940.4	-1	reviewed	p.I681	0.993	150	0.7%	244	33.6%	1	100%	-	-	-	NULL
SOX5	6660	genome.wustl.edu	37	12	23716202	23716202	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006940.4	-1	reviewed	p.R493Q	1.000	319	0%	264	30.7%	0	-	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
LRMP	4033	genome.wustl.edu	37	12	25236394	25236394	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006152.2	+1	reviewed	p.D94E	0.002	187	0%	311	30.2%	0	-	benign(0.005)	tolerated(0.12)	neutral(0.261)	HMMPfam_MRVI1
LRMP	4033	genome.wustl.edu	37	12	25243000	25243000	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006152.2	+1	reviewed	p.L159I	1.000	247	0%	301	34.9%	2	0%	probably_damaging(0.996)	tolerated(0.22)	deleterious(0.504)	HMMPfam_MRVI1
CASC1	55259	genome.wustl.edu	37	12	25307359	25307359	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018272.3	-1	validated	p.P111H	0.994	236	0%	394	31.2%	1	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
CASC1	55259	genome.wustl.edu	37	12	25308316	25308316	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018272.3	-1	validated	p.E77*	0.983	271	0%	292	30.1%	0	-	-	-	-	NULL
CASC1	55259	genome.wustl.edu	37	12	25311443	25311443	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018272.3	-1	validated	p.R54Q	0.005	309	0%	453	31.1%	1	0%	possibly_damaging(0.867)	deleterious(0)	deleterious(0.781)	NULL
IFLTD1	160492	genome.wustl.edu	37	12	25679755	25679755	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145728.1	-1	validated	p.S209Y	0.006	227	0%	289	35.3%	0	-	possibly_damaging(0.907)	deleterious(0.01)	deleterious(0.766)	HMMPfam_IF_tail,superfamily_Lamin A/C globular tail domain
RASSF8	11228	genome.wustl.edu	37	12	26217610	26217610	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007211.4	+1	validated	p.R95*	1.000	72	0%	76	35.5%	0	-	-	-	-	NULL
ITPR2	3709	genome.wustl.edu	37	12	26629876	26629876	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002223.2	-1	validated	p.R2063I	1.000	303	0%	333	30.9%	0	-	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	NULL
ITPR2	3709	genome.wustl.edu	37	12	26709168	26709168	+	Silent	SNP	C	C	T	rs191789657	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002223.2	-1	validated	p.S1654	0.918	117	0%	165	37%	0	-	-	-	-	NULL
ITPR2	3709	genome.wustl.edu	37	12	26875445	26875445	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002223.2	-1	validated	p.R137I	1.000	263	0.4%	191	41.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_MIR domain (Pfam 02815),HMMPfam_Ins145_P3_rec,HMMSmart_SM00472
TM7SF3	51768	genome.wustl.edu	37	12	27132787	27132787	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016551.2	-1	validated	p.S373	0.001	180	0%	313	31.9%	36	25%	-	-	-	NULL
C12orf71	728858	genome.wustl.edu	37	12	27235122	27235122	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080406.1	-1	inferred	p.D99N	0.000	138	0%	218	31.7%	0	-	benign(0.001)	tolerated(1)	-	NULL
C12orf70	341346	genome.wustl.edu	37	12	27628648	27628648	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145010.1	+1	validated	p.E166*	0.992	56	0%	60	30%	0	-	-	-	-	NULL
C12orf70	341346	genome.wustl.edu	37	12	27648767	27648767	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145010.1	+1	validated	p.S271F	0.015	64	0%	90	42.2%	0	-	possibly_damaging(0.449)	deleterious(0.01)	deleterious(0.552)	NULL
PPFIBP1	8496	genome.wustl.edu	37	12	27813822	27813822	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003622.2	+1	reviewed	p.E284K	1.000	164	0%	254	30.7%	3	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
REP15	387849	genome.wustl.edu	37	12	27849971	27849971	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029874.1	+1	provisional	p.C159S	1.000	53	0%	108	36.1%	0	-	probably_damaging(0.958)	deleterious(0)	deleterious(0.846)	NULL
MRPS35	60488	genome.wustl.edu	37	12	27908273	27908273	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021821.2	+1	reviewed	p.E288*	1.000	80	0%	78	33.3%	28	57.1%	-	-	-	NULL
CCDC91	55297	genome.wustl.edu	37	12	28605449	28605449	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018318.3	+1	validated	p.V321	0.020	83	0%	45	26.7%	8	37.5%	-	-	-	NULL
ENSG00000245593	0	genome.wustl.edu	37	12	29446020	29446020	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000500230	-1	known	NULL	0.007	27	0%	22	22.7%	0	-	-	-	-	-
FAR2	55711	genome.wustl.edu	37	12	29446285	29446285	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018099.3	+1	provisional	p.A81D	0.155	231	0%	307	27.7%	0	-	possibly_damaging(0.78)	deleterious(0.01)	deleterious(0.697)	HMMPfam_NAD_binding_4,superfamily_NAD(P)-bd
FAR2	55711	genome.wustl.edu	37	12	29474808	29474808	+	Missense_Mutation	SNP	C	C	T	rs184375580	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018099.3	+1	provisional	p.T403M	0.989	158	0%	247	32.8%	0	-	probably_damaging(0.987)	deleterious(0.01)	deleterious(0.842)	HMMPfam_Sterile
OVCH1	341350	genome.wustl.edu	37	12	29592331	29592331	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183378.2	-1	validated	p.K1065T	0.005	335	0%	307	30.6%	0	-	benign(0.001)	deleterious(0)	neutral(0.445)	NULL
OVCH1	341350	genome.wustl.edu	37	12	29625985	29625985	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183378.2	-1	validated	p.S551Y	0.000	303	0%	300	24.3%	0	-	probably_damaging(0.959)	tolerated(0.07)	deleterious(0.722)	NULL
OVCH1	341350	genome.wustl.edu	37	12	29640808	29640808	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183378.2	-1	validated	p.S237Y	0.996	126	0%	215	35.8%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases,PatternScan_TRYPSIN_SER
TMTC1	83857	genome.wustl.edu	37	12	29736401	29736401	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175861.2	-1	provisional	p.L345F	1.000	105	0%	138	29.7%	1	0%	benign(0.059)	tolerated(0.19)	neutral(0.054)	NULL
TMTC1	83857	genome.wustl.edu	37	12	29757194	29757194	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175861.2	-1	provisional	p.F281	1.000	139	0%	199	24.6%	2	50%	-	-	-	NULL
IPO8	10526	genome.wustl.edu	37	12	30792530	30792530	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006390.2	-1	reviewed	p.R803Q	0.787	169	0%	273	28.2%	12	66.6%	benign(0.001)	tolerated(0.24)	neutral(0.037)	superfamily_ARM-type_fold
IPO8	10526	genome.wustl.edu	37	12	30805937	30805937	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006390.2	-1	reviewed	p.E680*	1.000	108	0%	88	33%	8	12.5%	-	-	-	superfamily_ARM-type_fold
OVOS2	144203	genome.wustl.edu	37	12	31269982	31269982	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343151.1	-1	model	p.F1296C	0.961	394	0%	660	22.9%	7	0%	-	-	-	NULL
OVOS2	144203	genome.wustl.edu	37	12	31302339	31302339	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343151.1	-1	model	p.K318N	0.000	270	0%	307	18.9%	0	-	-	-	-	NULL
OVOS2	144203	genome.wustl.edu	37	12	31303138	31303138	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343151.1	-1	model	p.V301	0.000	258	0%	379	19.8%	0	-	-	-	-	NULL
DENND5B	160518	genome.wustl.edu	37	12	31605376	31605376	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144973.3	-1	validated	p.F376C	0.962	79	0%	124	31.5%	2	50%	benign(0.002)	tolerated(0.19)	neutral(0.050)	NULL
DENND5B	160518	genome.wustl.edu	37	12	31613208	31613208	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144973.3	-1	validated	p.L338I	1.000	156	0%	269	34.6%	0	-	probably_damaging(0.984)	deleterious(0.02)	deleterious(0.814)	HMMPfam_DENN,HMMSmart_SM00799
METTL20	254013	genome.wustl.edu	37	12	31820767	31820767	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135863.1	+1	validated	p.R211I	0.444	146	0%	313	30.7%	0	-	benign(0.072)	deleterious(0.01)	neutral(0.411)	HMMPfam_Methyltransf_16
H3F3C	440093	genome.wustl.edu	37	12	31944947	31944947	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013699.2	-1	validated	p.R52C	1.000	66	0%	114	35.1%	126	0.7%	probably_damaging(1)	-	-	HMMSmart_H3,superfamily_Histone-fold
BICD1	636	genome.wustl.edu	37	12	32369267	32369267	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001714.2	+1	reviewed	p.S100	0.000	116	0%	211	36%	2	100%	-	-	-	HMMPfam_BicD
BICD1	636	genome.wustl.edu	37	12	32480500	32480500	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001714.2	+1	reviewed	p.L371F	1.000	61	0%	110	28.2%	3	33.3%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_BicD
FGD4	121512	genome.wustl.edu	37	12	32764182	32764182	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139241.2	+1	reviewed	p.R435W	1.000	103	0%	159	44.7%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
DNM1L	10059	genome.wustl.edu	37	12	32884297	32884297	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012062.3	+1	reviewed	p.R403H	1.000	135	0%	196	28.1%	34	55.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Dynamin_M
PKP2	5318	genome.wustl.edu	37	12	32994089	32994089	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004572.3	-1	reviewed	p.T521A	1.000	143	0%	240	40%	7	42.8%	benign(0.106)	tolerated(0.27)	neutral(0.042)	superfamily_ARM repeat
ENSG00000245482	0	genome.wustl.edu	37	12	34175278	34175278	+	RNA	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000501954	-1	known	NULL	0.003	6	0.000	7	0.714	0	-	-	-	-	-
ALG10	84920	genome.wustl.edu	37	12	34178864	34178864	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032834.3	+1	reviewed	p.F146V	1.000	378	0%	422	41%	6	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_DIE2_ALG10
ALG10	84920	genome.wustl.edu	37	12	34179674	34179674	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032834.3	+1	reviewed	p.R416C	1.000	430	0%	482	30.5%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DIE2_ALG10
KIF21A	55605	genome.wustl.edu	37	12	39734163	39734163	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017641.3	-1	validated	p.S692L	1.000	251	0.4%	196	31.1%	9	33.3%	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	superfamily_WD40 repeat-like
KIF21A	55605	genome.wustl.edu	37	12	39734778	39734778	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017641.3	-1	validated	p.E667D	1.000	484	0%	346	29.5%	7	42.8%	possibly_damaging(0.717)	tolerated(0.2)	neutral(0.308)	superfamily_WD40 repeat-like
KIF21A	55605	genome.wustl.edu	37	12	39761813	39761813	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017641.3	-1	validated	p.D158Y	1.000	68	0%	54	25.9%	4	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
C12orf40	283461	genome.wustl.edu	37	12	40040169	40040169	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031748.2	+1	validated	p.D81Y	0.960	89	0%	52	28.8%	0	-	possibly_damaging(0.8)	-	-	NULL
C12orf40	283461	genome.wustl.edu	37	12	40041697	40041697	+	Missense_Mutation	SNP	G	G	A	rs185655294	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031748.2	+1	validated	p.R163K	0.054	197	0%	118	24.6%	0	-	possibly_damaging(0.792)	-	-	NULL
C12orf40	283461	genome.wustl.edu	37	12	40076860	40076860	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031748.2	+1	validated	p.Q378H	0.170	51	0%	42	33.3%	0	-	probably_damaging(0.991)	-	-	NULL
C12orf40	283461	genome.wustl.edu	37	12	40077242	40077242	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031748.2	+1	validated	p.E414D	0.076	115	0%	99	26.3%	0	-	benign(0.004)	-	-	NULL
C12orf40	283461	genome.wustl.edu	37	12	40114593	40114593	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031748.2	+1	validated	p.S500F	0.998	37	0%	15	40%	0	-	probably_damaging(0.991)	-	-	NULL
SLC2A13	114134	genome.wustl.edu	37	12	40153884	40153884	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052885.3	-1	validated	p.R631W	1.000	284	0.4%	178	33.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
LRRK2	120892	genome.wustl.edu	37	12	40668462	40668462	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198578.3	+1	reviewed	p.E578D	0.258	316	0%	256	20.7%	0	-	possibly_damaging(0.815)	tolerated(0.46)	neutral(0.320)	superfamily_ARM-type_fold
LRRK2	120892	genome.wustl.edu	37	12	40697829	40697829	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198578.3	+1	reviewed	p.E1224*	1.000	172	0%	149	30.9%	0	-	-	-	-	superfamily_SSF52058
LRRK2	120892	genome.wustl.edu	37	12	40722219	40722219	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198578.3	+1	reviewed	p.V1905A	1.000	164	0%	110	31.8%	0	-	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
LRRK2	120892	genome.wustl.edu	37	12	40749933	40749933	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198578.3	+1	reviewed	p.L2263I	1.000	183	0%	164	29.9%	0	-	benign(0.128)	tolerated(0.1)	neutral(0.297)	HMMSmart_WD40,superfamily_WD40_like
CNTN1	1272	genome.wustl.edu	37	12	41318406	41318406	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001843.2	+1	reviewed	p.E150*	1.000	227	0%	204	31.9%	0	-	-	-	-	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
CNTN1	1272	genome.wustl.edu	37	12	41331399	41331399	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001843.2	+1	reviewed	p.D380Y	0.397	274	0.4%	247	24.3%	0	-	possibly_damaging(0.565)	deleterious(0.04)	deleterious(0.542)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
CNTN1	1272	genome.wustl.edu	37	12	41387065	41387065	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001843.2	+1	reviewed	p.G703S	1.000	104	0%	79	30.4%	0	-	possibly_damaging(0.804)	deleterious(0.04)	deleterious(0.651)	superfamily_Fibronectin type III
PDZRN4	29951	genome.wustl.edu	37	12	41966766	41966766	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013377.3	+1	validated	p.E471*	1.000	88	0%	82	34.1%	0	-	-	-	-	NULL
GXYLT1	283464	genome.wustl.edu	37	12	42491806	42491806	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173601.1	-1	validated	p.W298C	1.000	243	0%	288	33%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_transf_8,superfamily_Nucleotide-diphospho-sugar transferases
YAF2	10138	genome.wustl.edu	37	12	42555484	42555484	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005748.3	-1	reviewed	p.K79T	1.000	313	0%	344	33.7%	5	20%	probably_damaging(0.978)	tolerated(0.23)	neutral(0.462)	NULL
PRICKLE1	144165	genome.wustl.edu	37	12	42854077	42854077	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144881.1	-1	reviewed	p.R677I	1.000	108	0%	139	30.2%	7	14.2%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	NULL
ADAMTS20	80070	genome.wustl.edu	37	12	43793026	43793026	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025003.3	-1	validated	p.S1432Y	0.998	179	0%	165	26.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
ADAMTS20	80070	genome.wustl.edu	37	12	43833785	43833785	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025003.3	-1	validated	p.R793I	0.876	223	0%	255	28.6%	0	-	benign(0.068)	tolerated(0.18)	neutral(0.060)	HMMPfam_ADAM_spacer1
ADAMTS20	80070	genome.wustl.edu	37	12	43896085	43896085	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025003.3	-1	validated	p.R246I	0.996	385	0%	516	32.9%	0	-	possibly_damaging(0.446)	tolerated(0.08)	neutral(0.446)	NULL
PUS7L	83448	genome.wustl.edu	37	12	44142271	44142271	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098614.1	-1	validated	p.R351I	1.000	193	0%	228	31.6%	1	100%	probably_damaging(0.984)	tolerated(0.08)	deleterious(0.730)	HMMPfam_TruD,superfamily_PsdUridine_synth_cat_dom
TWF1	5756	genome.wustl.edu	37	12	44193302	44193302	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002822.3	-1	reviewed	p.D162Y	1.000	192	0.5%	196	30.1%	11	45.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Cofilin_ADF,HMMSmart_SM00102,superfamily_Actin depolymerizing proteins
TMEM117	84216	genome.wustl.edu	37	12	44770476	44770476	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032256.1	+1	provisional	p.I289	1.000	150	0%	107	33.6%	3	0%	-	-	-	NULL
TMEM117	84216	genome.wustl.edu	37	12	44782065	44782065	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032256.1	+1	provisional	p.F385L	0.999	227	0%	167	35.3%	1	0%	benign(0.139)	deleterious(0.04)	neutral(0.361)	NULL
ANO6	196527	genome.wustl.edu	37	12	45796969	45796969	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142679.1	+1	validated	p.F576C	0.999	197	0%	215	33.5%	6	33.3%	probably_damaging(0.968)	deleterious(0)	deleterious(0.855)	NULL
ARID2	196528	genome.wustl.edu	37	12	46125024	46125024	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152641.2	+1	validated	p.E71*	1.000	250	0%	369	28.7%	0	-	-	-	-	HMMPfam_ARID,HMMSmart_SM00501,superfamily_ARID-like
ARID2	196528	genome.wustl.edu	37	12	46230405	46230405	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152641.2	+1	validated	p.R247S	1.000	185	0%	245	36.7%	0	-	probably_damaging(0.991)	tolerated(0.74)	neutral(0.446)	NULL
ARID2	196528	genome.wustl.edu	37	12	46245958	46245958	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152641.2	+1	validated	p.S1351I	0.987	100	0%	117	33.3%	4	0%	benign(0)	deleterious(0.01)	neutral(0.406)	NULL
SCAF11	9169	genome.wustl.edu	37	12	46316294	46316294	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004719.2	-1	validated	p.D1399	0.993	196	0%	233	32.2%	23	43.4%	-	-	-	NULL
SCAF11	9169	genome.wustl.edu	37	12	46325330	46325330	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004719.2	-1	validated	p.R267I	1.000	85	0%	100	33%	4	25%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	NULL
SLC38A1	81539	genome.wustl.edu	37	12	46633484	46633484	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077484.1	-1	validated	p.V34L	1.000	237	0%	342	33.6%	7	42.8%	possibly_damaging(0.789)	tolerated(0.72)	neutral(0.297)	NULL
SLC38A2	54407	genome.wustl.edu	37	12	46754957	46754957	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018976.4	-1	validated	p.M486I	1.000	103	0%	120	31.7%	27	33.3%	probably_damaging(0.99)	deleterious(0.05)	deleterious(0.787)	HMMPfam_Aa_trans
SLC38A4	55089	genome.wustl.edu	37	12	47170709	47170709	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143824.1	-1	validated	p.L384	0.763	110	0%	64	21.9%	0	-	-	-	-	HMMPfam_Aa_trans
AMIGO2	347902	genome.wustl.edu	37	12	47472178	47472178	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143668.1	-1	validated	p.R203Q	0.157	55	0%	86	33.7%	7	85.7%	benign(0.268)	tolerated(0.07)	neutral(0.348)	superfamily_SSF52058
LOC100288986	100288986	genome.wustl.edu	37	12	47628796	47628796	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343197.1	-1	model	p.C232	0.000	38	0%	65	38.5%	3	0%	-	-	-	NULL
LOC100288986	100288986	genome.wustl.edu	37	12	47629014	47629014	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343197.1	-1	model	p.E160K	0.579	60	0%	79	30.4%	2	0%	-	-	-	NULL
ENDOU	8909	genome.wustl.edu	37	12	48105543	48105543	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006025.3	-1	reviewed	p.D289N	1.000	95	0%	143	33.6%	10	40%	probably_damaging(0.999)	tolerated(0.26)	deleterious(0.524)	NULL
RAPGEF3	10411	genome.wustl.edu	37	12	48137390	48137390	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098531.2	-1	validated	p.R583I	0.718	94	0%	149	38.3%	13	38.4%	possibly_damaging(0.819)	tolerated(0.18)	neutral(0.365)	superfamily_Ras GEF
SLC48A1	55652	genome.wustl.edu	37	12	48174518	48174518	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390229	+1	known	p.I170M	0.000	17	0%	32	34.4%	22	45.4%	-	-	-	NULL
C12orf68	387856	genome.wustl.edu	37	12	48577967	48577967	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013635.3	+1	validated	p.E21G	1.000	20	0%	55	36.4%	3	0%	benign(0.034)	-	-	NULL
C12orf68	387856	genome.wustl.edu	37	12	48578326	48578326	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013635.3	+1	validated	p.E141K	0.034	10	0.000	7	0.571	3	33.3%	benign(0.007)	-	-	NULL
ZNF641	121274	genome.wustl.edu	37	12	48737362	48737362	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152320.2	-1	validated	p.L237	0.343	78	0%	104	37.5%	2	0%	-	-	-	NULL
LALBA	3906	genome.wustl.edu	37	12	48963707	48963707	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002289.2	-1	reviewed	p.D33Y	0.015	101	0%	164	27.4%	0	-	possibly_damaging(0.562)	deleterious(0.01)	deleterious(0.598)	HMMPfam_Lys,HMMSmart_LYZ1,superfamily_SSF53955
LOC100288297	100288297	genome.wustl.edu	37	12	49075176	49075176	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343165.1	+1	model	p.L29F	1.000	277	0%	514	31.9%	19	31.5%	-	-	-	NULL
DDX23	9416	genome.wustl.edu	37	12	49237729	49237729	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004818.2	-1	reviewed	p.R105Q	1.000	285	0%	632	35.1%	74	39.1%	unknown(0)	-	-	NULL
DDX23	9416	genome.wustl.edu	37	12	49239501	49239501	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004818.2	-1	reviewed	p.R22Q	1.000	50	0%	125	31.2%	43	41.8%	unknown(0)	-	-	NULL
RND1	27289	genome.wustl.edu	37	12	49255856	49255856	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014470.3	-1	validated	p.S85L	1.000	165	0%	378	32.5%	2	0%	possibly_damaging(0.811)	deleterious(0)	deleterious(0.750)	HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
WNT10B	7480	genome.wustl.edu	37	12	49364107	49364107	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003394.2	-1	reviewed	p.L34	0.999	38	0%	35	42.9%	0	-	-	-	-	NULL
PRKAG1	5571	genome.wustl.edu	37	12	49397621	49397621	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002733.3	-1	reviewed	p.R208C	1.000	66	0%	131	41.2%	47	42.5%	possibly_damaging(0.552)	tolerated(0.18)	neutral(0.244)	HMMPfam_CBS,HMMSmart_CBS,superfamily_SSF54631
MLL2	8085	genome.wustl.edu	37	12	49415645	49415645	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003482.3	-1	validated	p.D5511A	1.000	84	0%	133	30.1%	46	23.9%	unknown(0)	-	-	HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain
MLL2	8085	genome.wustl.edu	37	12	49420253	49420253	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003482.3	-1	validated	p.A5166T	1.000	34	0%	71	40.8%	19	57.8%	unknown(0)	-	-	NULL
MLL2	8085	genome.wustl.edu	37	12	49427369	49427369	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003482.3	-1	validated	p.R3707*	1.000	25	0%	35	40%	7	57.1%	-	-	-	NULL
TUBA1C	84790	genome.wustl.edu	37	12	49663619	49663619	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032704.3	+1	provisional	p.R79C	1.000	155	0.6%	377	41.1%	519	45.6%	probably_damaging(0.999)	-	-	HMMPfam_Tubulin,superfamily_Tubulin_FtsZ
ENSG00000246003	0	genome.wustl.edu	37	12	49690187	49690187	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000501178	-1	known	NULL	0.077	78	0%	150	36.7%	0	-	-	-	-	-
TROAP	10024	genome.wustl.edu	37	12	49722784	49722784	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005480.3	+1	validated	p.C322	0.000	94	0%	180	31.7%	25	44%	-	-	-	NULL
KCNH3	23416	genome.wustl.edu	37	12	49937697	49937697	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012284.1	+1	validated	e6-1	1.000	52	0%	66	45.5%	2	100%	-	-	-	-
NCKAP5L	57701	genome.wustl.edu	37	12	50196918	50196918	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037806.3	-1	validated	p.E52K	1.000	78	0%	174	34.5%	4	25%	probably_damaging(0.985)	deleterious(0.01)	deleterious(0.838)	NULL
ASIC1	41	genome.wustl.edu	37	12	50452864	50452864	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020039.2	+1	reviewed	p.K105N	1.000	81	1.2%	144	45.1%	0	-	possibly_damaging(0.492)	tolerated(0.47)	neutral(0.175)	HMMPfam_ASC
LIMA1	51474	genome.wustl.edu	37	12	50589625	50589625	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113546.1	-1	validated	p.E340K	0.982	38	0%	108	37%	10	30%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	NULL
LIMA1	51474	genome.wustl.edu	37	12	50615859	50615859	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113546.1	-1	validated	p.V192A	0.987	302	0%	499	30.3%	5	60%	probably_damaging(0.957)	deleterious(0)	deleterious(0.845)	NULL
LIMA1	51474	genome.wustl.edu	37	12	50616127	50616127	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113546.1	-1	validated	p.H103N	0.958	107	0%	225	27.6%	13	38.4%	benign(0.009)	tolerated(0.33)	neutral(0.025)	NULL
DIP2B	57609	genome.wustl.edu	37	12	51034576	51034576	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173602.2	+1	validated	p.A81D	0.988	104	0%	210	30.5%	5	40%	benign(0.245)	tolerated(0.23)	neutral(0.067)	HMMPfam_DMAP_binding
DIP2B	57609	genome.wustl.edu	37	12	51080411	51080411	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173602.2	+1	validated	p.P499	0.970	157	0%	267	39%	4	50%	-	-	-	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
DIP2B	57609	genome.wustl.edu	37	12	51108288	51108288	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173602.2	+1	validated	p.L920	1.000	138	0%	276	31.2%	3	66.6%	-	-	-	superfamily_Acetyl-CoA synthetase-like
DIP2B	57609	genome.wustl.edu	37	12	51126253	51126253	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173602.2	+1	validated	p.I1305	0.404	83	0%	112	32.1%	8	0%	-	-	-	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ATF1	466	genome.wustl.edu	37	12	51189724	51189724	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005171.3	+1	validated	p.Q42H	1.000	127	0%	247	32.4%	9	0%	probably_damaging(0.98)	deleterious(0.04)	deleterious(0.773)	NULL
CSRNP2	81566	genome.wustl.edu	37	12	51457699	51457699	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030809.1	-1	provisional	p.D488Y	0.995	68	0%	133	31.6%	22	50%	possibly_damaging(0.922)	deleterious(0)	deleterious(0.816)	NULL
TFCP2	7024	genome.wustl.edu	37	12	51493439	51493439	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005653.4	-1	reviewed	p.F425	1.000	320	0%	577	36.9%	34	14.7%	-	-	-	NULL
TFCP2	7024	genome.wustl.edu	37	12	51497498	51497498	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005653.4	-1	reviewed	p.R339*	1.000	200	0%	428	31.1%	20	5%	-	-	-	superfamily_SAM/Pointed domain
POU6F1	5463	genome.wustl.edu	37	12	51584232	51584232	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002702.3	-1	validated	p.R235H	1.000	80	0%	166	34.3%	5	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
POU6F1	5463	genome.wustl.edu	37	12	51584312	51584312	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002702.3	-1	validated	p.W208*	1.000	103	0%	212	30.7%	5	20%	-	-	-	HMMPfam_Pou,HMMSmart_SM00352,superfamily_lambda repressor-like DNA-binding domains
GALNT6	11226	genome.wustl.edu	37	12	51752037	51752037	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007210.3	-1	reviewed	p.F459	0.854	116	0%	216	31.5%	3	33.3%	-	-	-	superfamily_SSF53448
GALNT6	11226	genome.wustl.edu	37	12	51758030	51758030	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007210.3	-1	reviewed	p.F308	0.726	118	0%	155	27.1%	8	62.5%	-	-	-	HMMPfam_Glycos_transf_2,superfamily_SSF53448
SLC4A8	9498	genome.wustl.edu	37	12	51834555	51834555	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039960.1	+1	validated	p.E38*	1.000	158	0%	276	35.9%	0	-	-	-	-	NULL
SLC4A8	9498	genome.wustl.edu	37	12	51865243	51865243	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039960.1	+1	validated	p.E611*	1.000	226	0%	240	31.7%	0	-	-	-	-	HMMPfam_HCO3_cotransp
SLC4A8	9498	genome.wustl.edu	37	12	51890948	51890948	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004858.2	+1	validated	p.N1041H	0.025	108	0%	211	39.3%	0	-	possibly_damaging(0.776)	deleterious(0)	deleterious(0.734)	NULL
SCN8A	6334	genome.wustl.edu	37	12	52094966	52094966	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014191.2	+1	reviewed	p.L323F	1.000	357	0%	516	34.7%	0	-	possibly_damaging(0.823)	deleterious(0)	deleterious(0.756)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN8A	6334	genome.wustl.edu	37	12	52156333	52156333	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014191.2	+1	reviewed	p.A806V	1.000	249	0%	336	33.6%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN8A	6334	genome.wustl.edu	37	12	52156341	52156341	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014191.2	+1	reviewed	p.P809S	1.000	250	0%	319	34.2%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
KRT80	144501	genome.wustl.edu	37	12	52566004	52566004	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182507.2	-1	reviewed	p.L386M	1.000	117	0%	200	29%	17	41.1%	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	HMMPfam_Filament
KRT6C	286887	genome.wustl.edu	37	12	52864991	52864991	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173086.4	-1	reviewed	p.I334	0.970	348	0%	475	29.9%	0	-	-	-	-	HMMPfam_Filament
KRT6A	3853	genome.wustl.edu	37	12	52884491	52884491	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005554.3	-1	reviewed	p.I313	1.000	320	0.3%	462	31.8%	27	55.5%	-	-	-	HMMPfam_Filament
KRT6A	3853	genome.wustl.edu	37	12	52884955	52884955	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005554.3	-1	reviewed	p.Y253H	1.000	463	0%	641	33.4%	26	46.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Filament
KRT6A	3853	genome.wustl.edu	37	12	52886677	52886677	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005554.3	-1	reviewed	p.G99E	0.996	288	0%	339	22.4%	2	50%	unknown(0)	deleterious(0.04)	-	NULL
KRT5	3852	genome.wustl.edu	37	12	52911437	52911437	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000424.3	-1	reviewed	p.K343N	0.994	271	0%	310	35.2%	957	45.5%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Filament
LOC100129218	100129218	genome.wustl.edu	37	12	52912843	52912843	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001718439.2	+1	model	p.E234K	0.103	297	0%	349	36.4%	418	50.4%	-	-	-	NULL
KRT73	319101	genome.wustl.edu	37	12	53010078	53010078	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175068.2	-1	reviewed	p.N178K	1.000	292	0%	350	30.9%	0	-	possibly_damaging(0.932)	deleterious(0)	deleterious(0.823)	HMMPfam_Filament
KRT2	3849	genome.wustl.edu	37	12	53039159	53039159	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000423.2	-1	reviewed	p.G522R	1.000	158	0%	287	38.7%	0	-	unknown(0)	tolerated(0.34)	-	NULL
KRT77	374454	genome.wustl.edu	37	12	53085738	53085738	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175078.2	-1	reviewed	p.Q482H	1.000	85	0%	119	31.1%	0	-	unknown(0)	tolerated(0.12)	-	NULL
KRT77	374454	genome.wustl.edu	37	12	53090208	53090208	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175078.2	-1	reviewed	p.E255D	1.000	193	0%	315	23.8%	0	-	probably_damaging(0.992)	tolerated(0.06)	deleterious(0.770)	HMMPfam_Filament
KRT3	3850	genome.wustl.edu	37	12	53186950	53186950	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_057088.2	-1	reviewed	p.K308N	1.000	330	0%	631	33.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Filament
KRT3	3850	genome.wustl.edu	37	12	53188005	53188005	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_057088.2	-1	reviewed	p.E252D	0.965	230	0%	329	29.8%	0	-	probably_damaging(0.991)	tolerated(0.12)	deleterious(0.705)	HMMPfam_Filament
KRT79	338785	genome.wustl.edu	37	12	53217734	53217734	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175834.2	-1	reviewed	p.E361D	1.000	88	0%	136	35.3%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_Prefoldin,HMMPfam_Filament
KRT18	3875	genome.wustl.edu	37	12	53343375	53343375	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000224.2	+1	reviewed	e1+1	1.000	29	0%	31	22.6%	32	65.6%	-	-	-	-
CSAD	51380	genome.wustl.edu	37	12	53567555	53567555	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015989.4	-1	validated	e2-1	0.382	89	0%	328	32.6%	8	62.5%	-	-	-	-
RARG	5916	genome.wustl.edu	37	12	53609098	53609098	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000966.4	-1	validated	p.E152K	1.000	165	0%	316	37%	11	27.2%	benign(0.141)	tolerated(0.17)	neutral(0.071)	HMMPfam_zf-C4,HMMSmart_SM00399,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
SP7	121340	genome.wustl.edu	37	12	53723091	53723091	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152860.1	-1	provisional	p.K45N	1.000	172	0%	313	42.2%	1	0%	benign(0.328)	tolerated(0.25)	neutral(0.140)	NULL
SP1	6667	genome.wustl.edu	37	12	53800403	53800403	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138473.2	+1	validated	p.A570	0.962	63	0%	160	30%	19	36.8%	-	-	-	NULL
NPFF	8620	genome.wustl.edu	37	12	53900610	53900610	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003717.2	-1	reviewed	p.N98H	0.000	80	0%	143	29.4%	5	20%	benign(0.002)	tolerated(0.16)	neutral(0.059)	NULL
ATF7	11016	genome.wustl.edu	37	12	53946348	53946348	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130059.1	-1	validated	p.R41Q	1.000	182	0%	365	34.5%	6	33.3%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
CALCOCO1	57658	genome.wustl.edu	37	12	54105605	54105605	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026554.1	-1	validated	NULL	0.182	65	0%	103	35%	45	46.6%	-	-	-	-
HOXC5	3222	genome.wustl.edu	37	12	54427047	54427047	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018953.2	+1	reviewed	p.I47	1.000	85	0%	75	34.7%	0	-	-	-	-	NULL
GPR84	53831	genome.wustl.edu	37	12	54757322	54757322	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020370.2	-1	validated	p.S105F	1.000	152	0%	323	34.4%	2	0%	possibly_damaging(0.906)	tolerated(0.17)	neutral(0.418)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ITGA5	3678	genome.wustl.edu	37	12	54795258	54795258	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002205.2	-1	reviewed	p.S798T	1.000	114	0%	197	36.5%	30	0%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_Integrin_alpha2,superfamily_SSF69179
ITGA5	3678	genome.wustl.edu	37	12	54795425	54795425	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002205.2	-1	reviewed	p.S777	1.000	184	0%	353	33.7%	40	0%	-	-	-	HMMPfam_Integrin_alpha2,superfamily_SSF69179
ITGA5	3678	genome.wustl.edu	37	12	54798534	54798534	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002205.2	-1	reviewed	p.G457V	1.000	56	0%	66	27.3%	19	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FG-GAP,HMMSmart_Int_alpha,superfamily_SSF69318
NCKAP1L	3071	genome.wustl.edu	37	12	54901636	54901636	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005337.4	+1	reviewed	e4-1	1.000	318	0%	463	31.3%	0	-	-	-	-	-
PPP1R1A	5502	genome.wustl.edu	37	12	54971294	54971294	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000379690	-1	known	p.P114S	0.001	11	0%	19	52.6%	0	-	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_DARPP-32
DCD	117159	genome.wustl.edu	37	12	55038502	55038502	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053283.2	-1	reviewed	p.L110I	0.000	84	0%	82	36.6%	0	-	unknown(0)	-	-	NULL
KIAA0748	9840	genome.wustl.edu	37	12	55356965	55356965	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098815.1	-1	validated	p.S239	1.000	108	0%	193	37.3%	0	-	unknown(0)	-	-	NULL
OR6C74	254783	genome.wustl.edu	37	12	55641105	55641105	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005490.1	+1	provisional	p.L12I	0.885	320	0%	260	35.4%	0	-	probably_damaging(0.991)	deleterious(0.02)	deleterious(0.827)	superfamily_SSF81321
PHC1P1	653441	genome.wustl.edu	37	12	55807234	55807234	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000326184	-1	known	p.Q429	0.998	205	0%	315	19.4%	3	0%	-	-	-	NULL
PHC1P1	653441	genome.wustl.edu	37	12	55807956	55807956	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000326184	-1	known	p.E189*	1.000	171	0%	245	29.4%	3	0%	-	-	-	NULL
LOC100288280	100288280	genome.wustl.edu	37	12	55808271	55808271	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343188.1	+1	model	p.A31V	1.000	183	0%	236	32.2%	4	0%	-	-	-	NULL
OR6C2	341416	genome.wustl.edu	37	12	55846864	55846864	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_054105.1	+1	provisional	p.T289	0.000	221	0%	153	27.5%	0	-	-	-	-	superfamily_SSF81321
OR6C70	390327	genome.wustl.edu	37	12	55863736	55863736	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005499.1	-1	provisional	p.N63H	0.973	48	0%	60	35%	0	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_7tm_1,superfamily_SSF81321
OR6C4	341418	genome.wustl.edu	37	12	55945748	55945748	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005494.1	+1	provisional	p.I246	0.032	189	0%	219	42.9%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
ITGA7	3679	genome.wustl.edu	37	12	56090160	56090160	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144996.1	-1	reviewed	p.Q602H	0.003	51	0%	67	43.3%	2	50%	benign(0.002)	tolerated(0.08)	neutral(0.300)	HMMPfam_Integrin_alpha2,superfamily_Integrin domains
ITGA7	3679	genome.wustl.edu	37	12	56092353	56092353	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144996.1	-1	reviewed	p.D340Y	1.000	65	0%	108	42.6%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FG-GAP,HMMSmart_SM00191,superfamily_Integrin alpha N-terminal domain
ITGA7	3679	genome.wustl.edu	37	12	56094833	56094833	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144996.1	-1	reviewed	p.D174N	0.999	154	0%	243	30.9%	0	-	probably_damaging(0.986)	tolerated(0.05)	deleterious(0.780)	superfamily_Integrin alpha N-terminal domain
RDH5	5959	genome.wustl.edu	37	12	56117724	56117724	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002905.3	+1	reviewed	p.F208	1.000	46	0%	71	32.4%	2	100%	-	-	-	superfamily_NAD(P)-bd
SARNP	84324	genome.wustl.edu	37	12	56182893	56182893	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033082.3	-1	reviewed	p.R156I	1.000	191	0%	291	21.3%	127	24.4%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
RAB5B	5869	genome.wustl.edu	37	12	56385188	56385188	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002868.2	+1	validated	p.E161	1.000	122	0%	289	27.3%	55	49%	-	-	-	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
IKZF4	64375	genome.wustl.edu	37	12	56417543	56417543	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022465.3	+1	validated	p.C59F	1.000	167	0%	250	32.4%	0	-	benign(0)	deleterious(0.01)	neutral(0.406)	NULL
IKZF4	64375	genome.wustl.edu	37	12	56418790	56418790	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000431367	+1	known	p.R4I	0.000	37	0%	60	40%	0	-	-	-	-	NULL
PA2G4	5036	genome.wustl.edu	37	12	56505310	56505310	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006191.2	+1	reviewed	p.K372N	1.000	230	0%	385	34.5%	202	37.6%	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	NULL
ZC3H10	84872	genome.wustl.edu	37	12	56514516	56514516	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032786.1	+1	provisional	p.R57Q	1.000	92	0%	145	38.6%	9	55.5%	probably_damaging(0.994)	deleterious(0.03)	deleterious(0.817)	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1
ESYT1	23344	genome.wustl.edu	37	12	56526334	56526334	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015292.2	+1	validated	p.R372C	0.996	151	0%	292	32.9%	66	43.9%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
MYL6B	140465	genome.wustl.edu	37	12	56548599	56548599	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002475.3	+1	reviewed	p.I59	1.000	179	0%	270	32.6%	97	34%	-	-	-	NULL
MYL6	4637	genome.wustl.edu	37	12	56555179	56555179	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_079423.2	+1	reviewed	p.R146C	0.998	177	0%	299	38.1%	4774	36.7%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMSmart_SM00054,superfamily_EF-hand
SMARCC2	6601	genome.wustl.edu	37	12	56574845	56574845	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003075.3	-1	reviewed	p.E333*	1.000	315	0%	660	22.1%	27	14.8%	-	-	-	NULL
RNF41	10193	genome.wustl.edu	37	12	56600237	56600237	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005785.2	-1	reviewed	p.E316D	1.000	49	0%	99	30.3%	28	32.1%	benign(0)	tolerated(0.12)	neutral(0.261)	NULL
OBFC2B	79035	genome.wustl.edu	37	12	56619962	56619962	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024068.3	+1	validated	e4-1	1.000	143	0%	277	33.2%	2	100%	-	-	-	-
GLS2	27165	genome.wustl.edu	37	12	56865592	56865592	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013267.2	-1	reviewed	p.I539	0.982	98	0%	246	32.9%	3	0%	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
BAZ2A	11176	genome.wustl.edu	37	12	56998031	56998031	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013449.3	-1	validated	p.N1005S	1.000	139	0%	242	38%	19	42.1%	possibly_damaging(0.942)	deleterious(0.03)	deleterious(0.752)	NULL
NACA	4666	genome.wustl.edu	37	12	57114324	57114324	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113203.1	-1	validated	p.A330	0.001	95	0%	230	33.9%	0	-	-	-	-	NULL
PRIM1	5557	genome.wustl.edu	37	12	57132306	57132306	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000946.2	-1	reviewed	p.F352L	0.939	199	0%	423	36.4%	15	53.3%	benign(0)	tolerated(0.69)	neutral(0.002)	superfamily_SSF56747
RDH16	8608	genome.wustl.edu	37	12	57346690	57346690	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003708.3	-1	validated	p.F219L	0.000	131	0%	212	38.7%	0	-	benign(0)	tolerated(1)	-	superfamily_NAD(P)-bd
ZBTB39	9880	genome.wustl.edu	37	12	57397276	57397276	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014830.1	-1	provisional	p.N476H	0.944	34	0%	83	22.9%	2	0%	possibly_damaging(0.491)	deleterious(0.01)	deleterious(0.569)	superfamily_C2H2 and C2HC zinc fingers
MYO1A	4640	genome.wustl.edu	37	12	57437734	57437734	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005379.2	-1	reviewed	p.E266D	1.000	183	0%	280	35.7%	0	-	probably_damaging(0.956)	tolerated(0.49)	neutral(0.410)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYO1A	4640	genome.wustl.edu	37	12	57440849	57440849	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005379.2	-1	reviewed	p.R158Q	1.000	181	0%	381	35.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
LRP1	4035	genome.wustl.edu	37	12	57532311	57532311	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002332.2	+1	reviewed	p.R46Q	1.000	218	0%	353	32.6%	5	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_LDL receptor-like module
LRP1	4035	genome.wustl.edu	37	12	57556270	57556270	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002332.2	+1	reviewed	p.E791D	1.000	106	0%	132	34.1%	8	12.5%	benign(0.296)	tolerated(0.66)	neutral(0.094)	superfamily_YWTD domain
LRP1	4035	genome.wustl.edu	37	12	57572681	57572681	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002332.2	+1	reviewed	p.P1539S	1.000	48	0%	85	22.4%	11	18.1%	possibly_damaging(0.943)	tolerated(0.07)	deleterious(0.707)	HMMSmart_SM00181,superfamily_EGF/Laminin
SHMT2	6472	genome.wustl.edu	37	12	57624596	57624596	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005412.5	+1	reviewed	p.R15I	1.000	48	0%	118	33.9%	84	58.3%	benign(0)	deleterious(0)	neutral(0.445)	NULL
STAC3	246329	genome.wustl.edu	37	12	57642489	57642489	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145064.1	-1	provisional	p.I144	0.964	196	0%	332	34.3%	6	66.6%	-	-	-	superfamily_Cysteine-rich domain
R3HDM2	22864	genome.wustl.edu	37	12	57651887	57651887	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014925.3	-1	validated	p.S765P	1.000	82	0%	173	27.2%	38	39.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
INHBE	83729	genome.wustl.edu	37	12	57849510	57849510	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031479.3	+1	validated	p.T64N	0.020	117	0%	165	31.5%	1	100%	probably_damaging(0.974)	tolerated(0.08)	deleterious(0.716)	NULL
GLI1	2735	genome.wustl.edu	37	12	57858942	57858942	+	Silent	SNP	G	G	A	rs148571068	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005269.2	+1	reviewed	p.S146	0.910	75	0%	132	30.3%	2	0%	-	-	-	NULL
GLI1	2735	genome.wustl.edu	37	12	57865314	57865314	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005269.2	+1	reviewed	p.L931M	0.999	42	0%	83	31.3%	7	0%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
ARHGAP9	64333	genome.wustl.edu	37	12	57868672	57868672	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032496.2	-1	reviewed	p.A546D	1.000	39	0%	79	35.4%	5	0%	possibly_damaging(0.9)	tolerated(0.52)	neutral(0.365)	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP
MARS	4141	genome.wustl.edu	37	12	57910042	57910042	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004990.2	+1	reviewed	p.P826	0.822	88	0%	135	34.8%	205	48.2%	-	-	-	NULL
DDIT3	1649	genome.wustl.edu	37	12	57910762	57910762	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004083.4	-1	validated	p.R114W	1.000	197	0%	338	36.1%	140	50.7%	possibly_damaging(0.824)	deleterious(0)	deleterious(0.756)	HMMSmart_SM00338,HMMPfam_bZIP_2
MIR616	693201	genome.wustl.edu	37	12	57912984	57912984	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000385293	-1	known	NULL	0.000	142	0%	296	41.6%	0	-	-	-	-	-
MBD6	114785	genome.wustl.edu	37	12	57922220	57922220	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052897.3	+1	validated	p.F899L	1.000	27	0%	27	29.6%	30	33.3%	possibly_damaging(0.865)	-	-	NULL
KIF5A	3798	genome.wustl.edu	37	12	57966024	57966024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004984.2	+1	reviewed	p.L515M	0.999	136	0%	328	40.2%	0	-	probably_damaging(0.994)	tolerated(0.07)	deleterious(0.771)	NULL
KIF5A	3798	genome.wustl.edu	37	12	57971822	57971822	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004984.2	+1	reviewed	p.R798C	1.000	95	0%	172	36%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Prefoldin
CYP27B1	1594	genome.wustl.edu	37	12	58157540	58157540	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000785.3	-1	reviewed	p.P423T	1.000	90	0%	167	36.5%	0	-	possibly_damaging(0.736)	deleterious(0.04)	deleterious(0.618)	HMMPfam_p450,superfamily_Cytochrome P450
CYP27B1	1594	genome.wustl.edu	37	12	58158285	58158285	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000785.3	-1	reviewed	p.E338K	0.976	118	0%	197	39.1%	1	0%	possibly_damaging(0.439)	tolerated(0.06)	neutral(0.466)	HMMPfam_p450,superfamily_Cytochrome P450
TSFM	10102	genome.wustl.edu	37	12	58180838	58180838	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005726.5	+1	reviewed	p.D126Y	1.000	100	0%	126	28.6%	34	44.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_EF_TS,superfamily_Elongation factor Ts (EF-Ts) dimerisation domain,PatternScan_EF_TS_2
XRCC6BP1	91419	genome.wustl.edu	37	12	58347431	58347431	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033276.2	+1	provisional	p.E166*	1.000	374	0%	538	28.4%	32	56.2%	-	-	-	HMMPfam_Peptidase_M76
LRIG3	121227	genome.wustl.edu	37	12	59268113	59268113	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153377.3	-1	provisional	e18-1	1.000	211	0%	228	33.8%	0	-	-	-	-	-
SLC16A7	9194	genome.wustl.edu	37	12	60173362	60173362	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004731.3	+1	provisional	p.E447*	0.912	147	0%	154	34.4%	0	-	-	-	-	NULL
MON2	23041	genome.wustl.edu	37	12	62877993	62877993	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015026.2	+1	validated	p.R52Q	1.000	79	0%	73	17.8%	2	50%	possibly_damaging(0.602)	tolerated(0.21)	neutral(0.253)	NULL
MON2	23041	genome.wustl.edu	37	12	62954874	62954874	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015026.2	+1	validated	p.A1338D	1.000	115	0.9%	122	26.2%	6	33.3%	benign(0.403)	deleterious(0.02)	deleterious(0.512)	superfamily_ARM-type_fold
MON2	23041	genome.wustl.edu	37	12	62986476	62986476	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015026.2	+1	validated	p.F1701V	1.000	157	0%	181	35.4%	19	52.6%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
ENSG00000250314	0	genome.wustl.edu	37	12	63397592	63397592	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000514535	-1	known	NULL	1.000	150	0%	182	34.6%	0	-	-	-	-	-
AVPR1A	552	genome.wustl.edu	37	12	63541185	63541185	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000706.3	-1	reviewed	p.S404L	0.967	281	0%	447	26.8%	1	0%	possibly_damaging(0.918)	tolerated(0.09)	deleterious(0.665)	HMMPfam_DUF1856
DPY19L2	283417	genome.wustl.edu	37	12	63954405	63954405	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173812.4	-1	validated	p.D722Y	1.000	97	0%	130	30.8%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF2211
DPY19L2	283417	genome.wustl.edu	37	12	64020267	64020267	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173812.4	-1	validated	p.F281L	1.000	58	0%	48	22.9%	0	-	benign(0.043)	deleterious(0.02)	neutral(0.386)	HMMPfam_DUF2211
C12orf56	115749	genome.wustl.edu	37	12	64746746	64746746	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099676.2	-1	validated	p.E115*	0.368	144	0%	225	38.7%	0	-	-	-	-	NULL
XPOT	11260	genome.wustl.edu	37	12	64818478	64818478	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007235.3	+1	reviewed	p.R428C	1.000	187	0%	275	32.4%	21	57.1%	benign(0.013)	deleterious(0.02)	neutral(0.384)	superfamily_ARM-type_fold
TBK1	29110	genome.wustl.edu	37	12	64849723	64849723	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013254.2	+1	reviewed	p.R25C	1.000	125	0%	242	38%	5	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
LEMD3	23592	genome.wustl.edu	37	12	65633925	65633925	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014319.4	+1	reviewed	p.R678Q	1.000	119	0%	125	28%	7	42.8%	probably_damaging(0.991)	tolerated(0.26)	deleterious(0.478)	HMMPfam_MAN1_C
MSRB3	253827	genome.wustl.edu	37	12	65856990	65856990	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198080.2	+1	validated	p.R156I	1.000	202	0%	257	35.4%	5	0%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_SelR,superfamily_Mss4_like
TMBIM4	51643	genome.wustl.edu	37	12	66531743	66531743	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016056.2	-1	validated	p.K238N	0.998	77	0%	84	32.1%	54	33.3%	-	-	-	NULL
TMBIM4	51643	genome.wustl.edu	37	12	66547187	66547187	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016056.2	-1	validated	p.L47I	1.000	109	0%	130	24.6%	51	25.4%	benign(0.228)	tolerated(0.16)	neutral(0.082)	HMMPfam_UPF0005
IRAK3	11213	genome.wustl.edu	37	12	66641494	66641494	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007199.2	+1	reviewed	p.S445I	0.584	150	0%	200	32%	1	0%	possibly_damaging(0.916)	tolerated(0.06)	deleterious(0.690)	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
HELB	92797	genome.wustl.edu	37	12	66700197	66700197	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033647.2	+1	reviewed	p.R227Q	1.000	220	0%	264	39.4%	1	0%	probably_damaging(0.998)	tolerated(0.23)	deleterious(0.516)	NULL
HELB	92797	genome.wustl.edu	37	12	66715761	66715761	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033647.2	+1	reviewed	p.E730V	0.945	190	0%	233	33.5%	0	-	probably_damaging(0.964)	tolerated(0.26)	neutral(0.441)	superfamily_P-loop containing nucleoside triphosphate hydrolases
CAND1	55832	genome.wustl.edu	37	12	67675792	67675792	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018448.3	+1	validated	p.L57	1.000	217	0.5%	340	28.8%	6	50%	-	-	-	HMMPfam_HEAT,superfamily_ARM repeat
CAND1	55832	genome.wustl.edu	37	12	67699069	67699069	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018448.3	+1	validated	p.L541I	1.000	206	0%	188	35.6%	21	33.3%	benign(0.104)	tolerated(0.37)	neutral(0.027)	superfamily_ARM repeat
DYRK2	8445	genome.wustl.edu	37	12	68051680	68051680	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006482.2	+1	reviewed	p.S331	0.107	110	0%	148	34.5%	11	45.4%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
NUP107	57122	genome.wustl.edu	37	12	69103079	69103079	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020401.2	+1	reviewed	p.R264Q	1.000	95	0%	142	29.6%	12	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Nup84_Nup100
MDM2	4193	genome.wustl.edu	37	12	69222705	69222705	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002392.3	+1	reviewed	p.S226	0.724	84	0%	178	34.8%	12	41.6%	-	-	-	superfamily_SWIB/MDM2 domain
CPM	1368	genome.wustl.edu	37	12	69326507	69326507	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005502.2	-1	reviewed	p.Q37H	0.985	111	0%	186	32.8%	3	0%	benign(0.008)	tolerated(0.13)	neutral(0.253)	HMMPfam_Peptidase_M14,HMMSmart_Zn_pept,superfamily_SSF53187
BEST3	144453	genome.wustl.edu	37	12	70070717	70070717	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032735.2	-1	validated	p.F282L	1.000	62	1.6%	130	31.5%	0	-	benign(0.415)	tolerated(0.17)	neutral(0.194)	HMMPfam_Bestrophin
BEST3	144453	genome.wustl.edu	37	12	70078335	70078335	+	Nonstop_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000266661	-1	known	p.*73Q	0.262	168	0.6%	271	31.4%	0	-	-	-	-	NULL
RAB3IP	117177	genome.wustl.edu	37	12	70194054	70194054	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175623.2	+1	validated	p.C334	1.000	200	0%	223	33.6%	35	51.4%	-	-	-	NULL
CNOT2	4848	genome.wustl.edu	37	12	70672044	70672044	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014515.4	+1	provisional	p.R13I	1.000	164	0%	177	30.5%	7	57.1%	benign(0.099)	deleterious(0)	neutral(0.452)	NULL
CNOT2	4848	genome.wustl.edu	37	12	70704760	70704760	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014515.4	+1	provisional	p.S45N	1.000	166	0%	141	29.8%	17	64.7%	benign(0)	tolerated(1)	-	NULL
PTPRB	5787	genome.wustl.edu	37	12	70988321	70988321	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001109754.1	-1	reviewed	p.G481D	1.000	302	0%	368	32.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
PTPRR	5801	genome.wustl.edu	37	12	71050484	71050484	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002849.2	-1	reviewed	p.R627K	1.000	138	0%	160	38.8%	0	-	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
PTPRR	5801	genome.wustl.edu	37	12	71158515	71158515	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002849.2	-1	reviewed	p.R134Q	1.000	133	0%	173	40.5%	0	-	benign(0.001)	deleterious(0)	neutral(0.445)	NULL
PTPRR	5801	genome.wustl.edu	37	12	71286491	71286491	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002849.2	-1	reviewed	p.L109I	1.000	327	0.3%	283	25.1%	0	-	benign(0.241)	deleterious(0.01)	neutral(0.430)	NULL
PTPRR	5801	genome.wustl.edu	37	12	71314163	71314163	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002849.2	-1	reviewed	p.R3K	1.000	47	0%	84	35.7%	0	-	benign(0.002)	deleterious(0)	neutral(0.445)	NULL
LGR5	8549	genome.wustl.edu	37	12	71974109	71974109	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003667.2	+1	provisional	p.E486	0.310	258	0%	340	30.9%	8	50%	-	-	-	superfamily_L domain-like
ZFC3H1	196441	genome.wustl.edu	37	12	72013718	72013718	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144982.4	-1	validated	p.F1679L	1.000	100	0%	104	37.5%	2	0%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMSmart_SM00386,superfamily_Protein prenylyltransferase
ZFC3H1	196441	genome.wustl.edu	37	12	72013878	72013878	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144982.4	-1	validated	p.K1626T	0.491	155	0%	193	35.8%	2	50%	benign(0)	tolerated(0.3)	neutral(0.029)	superfamily_Protein prenylyltransferase
ZFC3H1	196441	genome.wustl.edu	37	12	72025967	72025967	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144982.4	-1	validated	p.E1049*	1.000	170	0%	136	26.5%	3	0%	-	-	-	NULL
ZFC3H1	196441	genome.wustl.edu	37	12	72027185	72027185	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144982.4	-1	validated	p.K848N	1.000	89	0%	74	18.9%	1	100%	possibly_damaging(0.619)	deleterious(0.03)	deleterious(0.580)	NULL
ZFC3H1	196441	genome.wustl.edu	37	12	72037952	72037952	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144982.4	-1	validated	p.R476*	1.000	513	0%	743	29.1%	6	33.3%	-	-	-	NULL
RAB21	23011	genome.wustl.edu	37	12	72163597	72163597	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014999.2	+1	provisional	p.K59N	1.000	184	0%	193	37.3%	13	15.3%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540
TBC1D15	64786	genome.wustl.edu	37	12	72288536	72288536	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022771.4	+1	reviewed	p.S260N	1.000	121	0%	89	27%	11	54.5%	benign(0.338)	deleterious(0.04)	neutral(0.455)	NULL
TPH2	121278	genome.wustl.edu	37	12	72338072	72338072	+	Splice_Site	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173353.3	+1	reviewed	e3-2	1.000	186	0%	239	40.2%	0	-	-	-	-	-
TPH2	121278	genome.wustl.edu	37	12	72338170	72338170	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173353.3	+1	reviewed	p.E118*	1.000	256	0.4%	307	37.5%	0	-	-	-	-	HMMPfam_ACT,superfamily_SSF55021
TRHDE	29953	genome.wustl.edu	37	12	72969300	72969300	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013381.2	+1	reviewed	p.D722N	1.000	350	0%	195	24.1%	0	-	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
KCNC2	3747	genome.wustl.edu	37	12	75444936	75444936	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139137.2	-1	reviewed	p.T283	0.626	280	0%	242	28.1%	0	-	-	-	-	superfamily_Voltage-gated potassium channels
CAPS2	84698	genome.wustl.edu	37	12	75672828	75672828	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000328705	-1	known	p.E331*	1.000	176	0%	101	21.8%	0	-	-	-	-	superfamily_SSF47473
CAPS2	84698	genome.wustl.edu	37	12	75676053	75676053	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032606.3	-1	validated	p.K549N	1.000	209	0%	180	26.1%	0	-	probably_damaging(0.975)	deleterious(0)	deleterious(0.861)	NULL
CAPS2	84698	genome.wustl.edu	37	12	75698581	75698581	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032606.3	-1	validated	p.K264N	0.000	333	0.6%	440	34.1%	0	-	benign(0.056)	tolerated(0.46)	neutral(0.015)	NULL
GLIPR1L2	144321	genome.wustl.edu	37	12	75816691	75816691	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000435775	+1	known	p.T163I	0.001	187	0%	301	34.2%	0	-	unknown(0)	-	-	HMMSmart_SCP
BBS10	79738	genome.wustl.edu	37	12	76741275	76741275	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024685.3	-1	reviewed	p.T164A	0.275	122	0%	156	39.1%	1	0%	possibly_damaging(0.496)	tolerated(0.4)	neutral(0.181)	superfamily_GroEL-ATPase
OSBPL8	114882	genome.wustl.edu	37	12	76791548	76791548	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020841.4	-1	reviewed	p.E200*	1.000	210	0%	314	38.2%	5	0%	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
CSRP2	1466	genome.wustl.edu	37	12	77257072	77257072	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001321.1	-1	reviewed	p.E55D	1.000	155	0%	225	33.3%	77	32.4%	possibly_damaging(0.473)	tolerated(0.19)	neutral(0.206)	HMMPfam_LIM,HMMSmart_SM00132,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
NAV3	89795	genome.wustl.edu	37	12	78400466	78400466	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014903.4	+1	validated	p.S383Y	1.000	122	0%	122	35.2%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
NAV3	89795	genome.wustl.edu	37	12	78400726	78400726	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014903.4	+1	validated	p.E470*	1.000	111	0%	121	33.9%	0	-	-	-	-	NULL
NAV3	89795	genome.wustl.edu	37	12	78513543	78513543	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014903.4	+1	validated	p.S1189	0.768	153	0%	213	39.4%	0	-	-	-	-	NULL
NAV3	89795	genome.wustl.edu	37	12	78531043	78531043	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014903.4	+1	validated	p.D1510Y	1.000	237	0%	169	26%	0	-	possibly_damaging(0.947)	deleterious(0)	deleterious(0.835)	NULL
NAV3	89795	genome.wustl.edu	37	12	78540155	78540155	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014903.4	+1	validated	p.E1564*	1.000	130	0%	74	25.7%	0	-	-	-	-	NULL
LOC338756	338756	genome.wustl.edu	37	12	79952808	79952808	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001714544.1	+1	model	p.E120K	0.096	6	0.000	16	0.250	0	-	-	-	-	NULL
PAWR	5074	genome.wustl.edu	37	12	79986416	79986416	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002583.2	-1	reviewed	p.L332	1.000	233	0%	186	27.4%	23	52.1%	-	-	-	NULL
PPP1R12A	4659	genome.wustl.edu	37	12	80214661	80214661	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143885.1	-1	reviewed	p.S336Y	1.000	442	0%	484	29.3%	5	60%	possibly_damaging(0.843)	deleterious(0.01)	deleterious(0.729)	NULL
OTOGL	283310	genome.wustl.edu	37	12	80645559	80645559	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000455751	+1	known	p.E63*	1.000	170	0%	211	31.3%	0	-	probably_damaging(0.985)	deleterious(0.04)	deleterious(0.781)	HMMPfam_C8
OTOGL	283310	genome.wustl.edu	37	12	80714296	80714296	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000442704	+1	known	p.R136Q	0.035	151	0%	151	33.1%	0	-	-	-	-	superfamily_AbfB domain (Pfam 05270)
OTOGL	283310	genome.wustl.edu	37	12	80729791	80729791	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343203.1	+1	model	p.N1396H	1.000	177	0%	132	31.1%	0	-	probably_damaging(0.991)	tolerated(0.05)	deleterious(0.789)	NULL
OTOGL	283310	genome.wustl.edu	37	12	80747162	80747162	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000298820	+1	known	p.E256*	1.000	118	0%	132	40.9%	0	-	probably_damaging(0.995)	deleterious(0.04)	deleterious(0.806)	superfamily_Serine proterase inhibitors
OTOGL	283310	genome.wustl.edu	37	12	80760404	80760404	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343203.1	+1	model	p.I2003M	0.372	162	0.6%	129	34.1%	0	-	benign(0.038)	tolerated(0.1)	neutral(0.288)	NULL
PTPRQ	374462	genome.wustl.edu	37	12	80889863	80889863	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145026.1	+1	validated	p.S506Y	0.946	200	0%	70	34.3%	0	-	-	-	-	NULL
PTPRQ	374462	genome.wustl.edu	37	12	80899947	80899947	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145026.1	+1	validated	p.E656*	1.000	101	0%	47	31.9%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	NULL
PTPRQ	374462	genome.wustl.edu	37	12	80935578	80935578	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000266688	+1	known	p.F1133L	1.000	40	0%	21	52.4%	0	-	possibly_damaging(0.496)	tolerated(0.65)	neutral(0.169)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
PTPRQ	374462	genome.wustl.edu	37	12	80998953	80998953	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145026.1	+1	validated	p.S1425*	0.967	173	0%	40	20%	0	-	-	-	-	NULL
MYF5	4617	genome.wustl.edu	37	12	81111152	81111152	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005593.2	+1	validated	p.E104K	1.000	37	0%	47	42.6%	0	-	benign(0.042)	deleterious(0)	neutral(0.447)	HMMPfam_HLH,HMMSmart_HLH,superfamily_HLH_basic
LIN7A	8825	genome.wustl.edu	37	12	81283065	81283065	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004664.2	-1	validated	p.V56L	1.000	332	0%	229	31%	4	0%	possibly_damaging(0.636)	deleterious(0.01)	deleterious(0.628)	HMMSmart_SM00569,HMMPfam_L27
PPFIA2	8499	genome.wustl.edu	37	12	81657132	81657132	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003625.2	-1	reviewed	p.R1198I	1.000	181	0%	206	32%	0	-	-	-	-	NULL
PPFIA2	8499	genome.wustl.edu	37	12	81675106	81675106	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003625.2	-1	reviewed	p.A1048T	1.000	176	0%	139	35.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SAM_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain
PPFIA2	8499	genome.wustl.edu	37	12	81693162	81693162	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003625.2	-1	reviewed	e21-1	1.000	187	0%	121	25.6%	0	-	-	-	-	-
PPFIA2	8499	genome.wustl.edu	37	12	81747039	81747039	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003625.2	-1	reviewed	p.T618I	1.000	329	0%	311	32.8%	0	-	benign(0.008)	tolerated(0.44)	neutral(0.013)	NULL
PPFIA2	8499	genome.wustl.edu	37	12	81851545	81851545	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003625.2	-1	reviewed	p.R135I	1.000	443	0%	348	27.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PPFIA2	8499	genome.wustl.edu	37	12	81851624	81851624	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003625.2	-1	reviewed	p.E109*	1.000	303	0%	206	38.8%	0	-	-	-	-	NULL
C12orf26	84190	genome.wustl.edu	37	12	82793124	82793124	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032230.2	+1	validated	p.S361Y	0.998	164	0%	110	30%	3	33.3%	probably_damaging(0.989)	deleterious(0.01)	deleterious(0.845)	NULL
C12orf26	84190	genome.wustl.edu	37	12	82796816	82796816	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032230.2	+1	validated	p.R396*	0.997	238	0%	215	21.9%	3	0%	-	-	-	NULL
SLC6A15	55117	genome.wustl.edu	37	12	85266389	85266389	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182767.4	-1	validated	p.L432I	1.000	155	0%	121	38%	0	-	benign(0.037)	tolerated(0.05)	neutral(0.347)	HMMPfam_SNF
LRRIQ1	84125	genome.wustl.edu	37	12	85459115	85459115	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079910.1	+1	validated	p.L823I	1.000	225	0%	106	34%	2	50%	probably_damaging(0.991)	tolerated(0.12)	deleterious(0.705)	HMMPfam_LRR_1,superfamily_RNI-like
LRRIQ1	84125	genome.wustl.edu	37	12	85492769	85492769	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079910.1	+1	validated	p.N1069S	1.000	128	0%	89	37.1%	1	100%	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	superfamily_RNI-like
RASSF9	9182	genome.wustl.edu	37	12	86199303	86199303	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005447.3	-1	reviewed	p.R162M	0.996	387	0%	410	36.6%	3	66.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
RASSF9	9182	genome.wustl.edu	37	12	86199529	86199529	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005447.3	-1	reviewed	p.E87K	1.000	163	0.6%	162	39.5%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00314
NTS	4922	genome.wustl.edu	37	12	86276065	86276065	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006183.3	+1	reviewed	p.R142I	1.000	108	0%	112	26.8%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_Pro-NT_NN
MGAT4C	25834	genome.wustl.edu	37	12	86373821	86373821	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013244.3	-1	validated	p.R228Q	0.558	109	0%	97	74.2%	0	-	possibly_damaging(0.602)	tolerated(0.38)	neutral(0.226)	HMMPfam_Glyco_transf_54
MGAT4C	25834	genome.wustl.edu	37	12	86374022	86374022	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013244.3	-1	validated	p.A161V	0.867	73	2.7%	48	31.2%	0	-	benign(0.208)	tolerated(0.1)	neutral(0.306)	HMMPfam_Glyco_transf_54
C12orf50	160419	genome.wustl.edu	37	12	88391937	88391937	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152589.1	-1	predicted	p.G55V	1.000	379	0%	386	32.4%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
C12orf29	91298	genome.wustl.edu	37	12	88436685	88436685	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009894.2	+1	validated	p.E98*	0.962	99	0%	46	32.6%	4	0%	-	-	-	NULL
CEP290	80184	genome.wustl.edu	37	12	88476854	88476854	+	Nonsense_Mutation	SNP	C	C	A	rs62638179		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025114.3	-1	reviewed	p.E1656*	1.000	247	0%	253	37.9%	0	-	-	-	-	NULL
CEP290	80184	genome.wustl.edu	37	12	88490731	88490731	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025114.3	-1	reviewed	p.E1013*	1.000	320	0%	318	30.8%	0	-	-	-	-	NULL
CEP290	80184	genome.wustl.edu	37	12	88514027	88514027	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025114.3	-1	reviewed	p.V462	0.961	177	0%	141	34%	1	100%	-	-	-	NULL
POC1B	282809	genome.wustl.edu	37	12	89861454	89861454	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000378528	-1	known	p.S60Y	0.991	93	0%	147	29.9%	17	64.7%	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
ENSG00000226982	0	genome.wustl.edu	37	12	89894379	89894379	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000413048	+1	known	p.S139	0.314	196	0%	255	28.2%	0	-	-	-	-	NULL
GALNT4	8693	genome.wustl.edu	37	12	89916872	89916872	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003774.3	-1	reviewed	p.F485L	1.000	114	0%	155	35.5%	7	71.4%	possibly_damaging(0.8)	tolerated(0.24)	neutral(0.338)	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,superfamily_Ricin B-like lectins
GALNT4	8693	genome.wustl.edu	37	12	89916942	89916942	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003774.3	-1	reviewed	p.S462F	0.403	124	0%	152	35.5%	4	25%	benign(0.313)	deleterious(0.02)	deleterious(0.481)	HMMPfam_Ricin_B_lectin,HMMSmart_SM00458,superfamily_Ricin B-like lectins
ATP2B1	490	genome.wustl.edu	37	12	89984923	89984923	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001682.2	-1	reviewed	p.A1167	0.999	251	0%	249	34.1%	63	33.3%	-	-	-	NULL
ATP2B1	490	genome.wustl.edu	37	12	90035953	90035953	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001682.2	-1	reviewed	p.P130S	1.000	150	0%	151	31.8%	8	75%	possibly_damaging(0.501)	tolerated(0.08)	neutral(0.468)	superfamily_SSF81665
EPYC	1833	genome.wustl.edu	37	12	91366662	91366662	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004950.4	-1	reviewed	p.A146T	0.997	345	0%	274	29.6%	4	100%	benign(0)	tolerated(1)	-	HMMSmart_SM00013,superfamily_L domain-like
LUM	4060	genome.wustl.edu	37	12	91502218	91502218	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002345.3	-1	reviewed	p.F180C	0.629	179	0%	177	35.6%	520	1.9%	possibly_damaging(0.931)	deleterious(0)	deleterious(0.822)	HMMSmart_SM00369,superfamily_L domain-like
DCN	1634	genome.wustl.edu	37	12	91550963	91550963	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001920.3	-1	reviewed	p.L181M	1.000	207	0.5%	197	29.9%	235	0.4%	probably_damaging(1)	tolerated(0.27)	deleterious(0.533)	superfamily_L domain-like
PLEKHG7	440107	genome.wustl.edu	37	12	93135293	93135293	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004330.2	+1	validated	p.L42	0.999	239	0%	338	28.4%	0	-	-	-	-	superfamily_DH-domain
PLEKHG7	440107	genome.wustl.edu	37	12	93155554	93155554	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004330.2	+1	validated	p.L243M	1.000	312	0%	283	28.6%	0	-	probably_damaging(0.963)	tolerated(0.17)	neutral(0.465)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
UBE2N	7334	genome.wustl.edu	37	12	93804881	93804881	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003348.3	-1	reviewed	p.I75M	0.998	229	0%	297	33.7%	124	54%	probably_damaging(0.967)	deleterious(0)	deleterious(0.853)	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like
SOCS2	8835	genome.wustl.edu	37	12	93966757	93966757	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003877.3	+1	reviewed	p.E28D	1.000	10	0.000	8	0.500	3	0%	unknown(0)	tolerated(0.1)	-	NULL
PLXNC1	10154	genome.wustl.edu	37	12	94634435	94634435	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005761.1	+1	provisional	p.W765*	1.000	212	0%	309	33.3%	3	0%	-	-	-	HMMPfam_TIG,HMMSmart_IPT
PLXNC1	10154	genome.wustl.edu	37	12	94642186	94642186	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005761.1	+1	provisional	p.R926W	0.281	68	0%	79	38%	3	0%	probably_damaging(0.967)	deleterious(0.03)	deleterious(0.773)	HMMSmart_IPT
PLXNC1	10154	genome.wustl.edu	37	12	94673353	94673353	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005761.1	+1	provisional	p.E1235*	1.000	118	0%	191	38.2%	2	0%	-	-	-	superfamily_Rho_GAP,HMMPfam_Plexin_cytopl
CCDC41	51134	genome.wustl.edu	37	12	94797039	94797039	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042399.1	-1	validated	e3-1	1.000	205	0.5%	233	27%	0	-	-	-	-	-
CCDC41	51134	genome.wustl.edu	37	12	94805551	94805551	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042399.1	-1	validated	p.E82D	1.000	318	0%	355	39.2%	2	0%	benign(0.108)	tolerated(0.13)	neutral(0.261)	NULL
NR2C1	7181	genome.wustl.edu	37	12	95416118	95416118	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003297.2	-1	reviewed	p.E567*	1.000	234	0%	350	29.4%	43	37.2%	-	-	-	HMMPfam_Hormone_recep,superfamily_Nuclear receptor ligand-binding domain
USP44	84101	genome.wustl.edu	37	12	95922739	95922739	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042403.1	-1	validated	p.E490*	1.000	113	0%	173	30.1%	0	-	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
NTN4	59277	genome.wustl.edu	37	12	96059658	96059658	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021229.3	-1	validated	p.F560I	0.883	195	0%	297	34.3%	2	50%	benign(0.002)	tolerated(0.4)	neutral(0.016)	superfamily_TIMP-like,HMMPfam_NTR,HMMSmart_SM00643
CCDC38	120935	genome.wustl.edu	37	12	96300199	96300199	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182496.2	-1	validated	p.F112C	1.000	151	0%	238	33.6%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
AMDHD1	144193	genome.wustl.edu	37	12	96350649	96350649	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152435.2	+1	validated	p.E166K	1.000	45	0%	38	39.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Composite domain of metallo-dependent hydrolases,superfamily_Metallo-dependent hydrolases
ELK3	2004	genome.wustl.edu	37	12	96640911	96640911	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005230.2	+1	reviewed	p.R134H	1.000	113	0%	174	39.7%	4	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	"superfamily_""Winged helix"" DNA-binding domain"
C12orf63	374467	genome.wustl.edu	37	12	97052058	97052058	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198520.2	+1	validated	p.Q223	0.001	159	0%	236	30.5%	0	-	-	-	-	NULL
C12orf63	374467	genome.wustl.edu	37	12	97057643	97057643	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198520.2	+1	validated	p.K257N	0.970	196	0%	178	33.7%	0	-	unknown(0)	tolerated(0.56)	-	NULL
C12orf63	374467	genome.wustl.edu	37	12	97137181	97137181	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198520.2	+1	validated	p.E832	1.000	101	0%	118	35.6%	0	-	-	-	-	NULL
TMPO	7112	genome.wustl.edu	37	12	98909672	98909672	+	Silent	SNP	G	G	A	rs190115355	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003276.2	+1	reviewed	p.S9	1.000	18	0%	41	48.8%	22	31.8%	-	-	-	superfamily_LEM domain,HMMPfam_Thymopoietin
ENSG00000225185	0	genome.wustl.edu	37	12	98984867	98984867	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000420972	-1	known	p.E39D	1.000	23	0%	57	35.1%	0	-	-	-	-	HMMPfam_Pro_isomerase,superfamily_Cyclophilin-like
SLC25A3	5250	genome.wustl.edu	37	12	98987810	98987810	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005888.3	+1	reviewed	p.H18	0.923	31	0%	23	34.8%	97	5.1%	-	-	-	NULL
SLC25A3	5250	genome.wustl.edu	37	12	98991775	98991775	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005888.3	+1	reviewed	p.E142*	1.000	185	0%	370	36.8%	257	6.2%	-	-	-	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr
APAF1	317	genome.wustl.edu	37	12	99059430	99059430	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181861.1	+1	reviewed	p.R352I	1.000	137	0%	189	19.6%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_NB-ARC,superfamily_WD40 repeat-like,superfamily_P-loop containing nucleoside triphosphate hydrolases
APAF1	317	genome.wustl.edu	37	12	99093185	99093185	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181861.1	+1	reviewed	e16-1	1.000	92	0%	149	34.2%	0	-	-	-	-	-
ANKS1B	56899	genome.wustl.edu	37	12	99145144	99145144	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152788.3	-1	validated	p.R1221C	1.000	307	0%	530	32.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ANKS1B	56899	genome.wustl.edu	37	12	99638150	99638150	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152788.3	-1	validated	p.E797*	1.000	446	0%	439	29.8%	2	50%	-	-	-	NULL
ANKS1B	56899	genome.wustl.edu	37	12	99793422	99793422	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152788.3	-1	validated	p.G581	0.000	236	0%	202	28.2%	0	-	-	-	-	NULL
UHRF1BP1L	23074	genome.wustl.edu	37	12	100451450	100451450	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015054.1	-1	validated	p.S1108Y	0.996	232	0%	228	34.6%	5	60%	possibly_damaging(0.509)	deleterious(0.03)	deleterious(0.535)	NULL
SCYL2	55681	genome.wustl.edu	37	12	100720524	100720524	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017988.4	+1	provisional	p.G545E	1.000	119	0%	194	27.3%	12	33.3%	possibly_damaging(0.603)	deleterious(0)	deleterious(0.653)	superfamily_ARM repeat
SCYL2	55681	genome.wustl.edu	37	12	100723015	100723015	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017988.4	+1	provisional	p.G560E	1.000	189	0%	170	18.8%	14	28.5%	probably_damaging(0.973)	deleterious(0)	deleterious(0.859)	superfamily_ARM repeat
SLC17A8	246213	genome.wustl.edu	37	12	100813602	100813602	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139319.2	+1	reviewed	p.E479*	1.000	72	0%	79	41.8%	0	-	-	-	-	superfamily_MFS general substrate transporter
SLC17A8	246213	genome.wustl.edu	37	12	100813844	100813844	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139319.2	+1	reviewed	p.K559N	0.252	120	0%	165	33.3%	0	-	possibly_damaging(0.85)	tolerated(0.18)	neutral(0.383)	NULL
NR1H4	9971	genome.wustl.edu	37	12	100926248	100926248	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005123.2	+1	provisional	p.R153I	1.000	203	0%	350	34.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
NR1H4	9971	genome.wustl.edu	37	12	100930764	100930764	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005123.2	+1	provisional	p.I286M	0.996	57	0%	19	31.6%	0	-	possibly_damaging(0.696)	tolerated(0.24)	neutral(0.287)	superfamily_Nuclear receptor ligand-binding domain
ANO4	121601	genome.wustl.edu	37	12	101368632	101368632	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178826.3	+1	validated	p.I154	1.000	204	0%	246	32.1%	0	-	-	-	-	NULL
SLC5A8	160728	genome.wustl.edu	37	12	101576625	101576625	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145913.3	-1	validated	p.R374I	0.000	183	0%	219	36.1%	0	-	benign(0.234)	tolerated(0.1)	neutral(0.310)	HMMPfam_SSF
UTP20	27340	genome.wustl.edu	37	12	101750828	101750828	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014503.2	+1	validated	p.E1887*	1.000	97	0%	119	36.1%	1	0%	-	-	-	superfamily_ARM repeat
UTP20	27340	genome.wustl.edu	37	12	101757432	101757432	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014503.2	+1	validated	p.R1957*	1.000	168	0%	289	31.1%	6	16.6%	-	-	-	superfamily_ARM repeat
UTP20	27340	genome.wustl.edu	37	12	101774940	101774940	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014503.2	+1	validated	p.S2536Y	1.000	188	0%	315	27.6%	6	66.6%	possibly_damaging(0.532)	tolerated(1)	neutral(0.180)	superfamily_ARM repeat
MYBPC1	4604	genome.wustl.edu	37	12	102025853	102025853	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002465.2	+1	validated	p.Y165D	1.000	207	0%	343	25.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
MYBPC1	4604	genome.wustl.edu	37	12	102036200	102036200	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002465.2	+1	validated	p.E223D	1.000	102	0%	184	37.5%	0	-	probably_damaging(0.984)	tolerated(0.35)	neutral(0.451)	NULL
MYBPC1	4604	genome.wustl.edu	37	12	102056274	102056274	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002465.2	+1	validated	p.A724D	1.000	183	0%	229	32.8%	0	-	benign(0.028)	tolerated(0.08)	neutral(0.301)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
SYCP3	50511	genome.wustl.edu	37	12	102127364	102127364	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153694.4	-1	reviewed	p.E148*	1.000	280	0%	393	30.3%	0	-	-	-	-	HMMPfam_Cor1
GNPTAB	79158	genome.wustl.edu	37	12	102155013	102155013	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024312.4	-1	reviewed	p.N1009	0.920	96	0%	123	39.8%	7	57.1%	-	-	-	NULL
GNPTAB	79158	genome.wustl.edu	37	12	102174022	102174022	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024312.4	-1	reviewed	p.L227V	0.980	332	0%	445	35.5%	3	66.6%	benign(0.027)	tolerated(0.13)	neutral(0.254)	NULL
DRAM1	55332	genome.wustl.edu	37	12	102313919	102313919	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018370.2	+1	reviewed	p.C204	1.000	372	0%	565	29.9%	7	0%	-	-	-	HMMPfam_Frag1
PMCH	5367	genome.wustl.edu	37	12	102590808	102590808	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002674.2	-1	validated	p.E131*	1.000	341	0%	199	28.6%	5	40%	-	-	-	HMMPfam_Pro-MCH
IGF1	3479	genome.wustl.edu	37	12	102811605	102811605	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001111285.1	-1	reviewed	p.K193N	0.503	517	0%	834	35.3%	8	12.5%	unknown(0)	tolerated(0.07)	-	NULL
HSP90B1	7184	genome.wustl.edu	37	12	104326616	104326616	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003299.1	+1	provisional	p.E103*	1.000	176	0%	274	31.4%	204	5.8%	-	-	-	HMMPfam_HATPase_c,HMMSmart_HATPase_c,superfamily_ATP_bd_ATPase,PatternScan_HSP90
HSP90B1	7184	genome.wustl.edu	37	12	104327992	104327992	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003299.1	+1	provisional	p.E224K	1.000	188	0%	276	38%	384	7.2%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_HATPase_c,HMMSmart_HATPase_c,superfamily_ATP_bd_ATPase
HSP90B1	7184	genome.wustl.edu	37	12	104336437	104336437	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003299.1	+1	provisional	p.R503*	1.000	135	0%	225	24%	1016	4.8%	-	-	-	superfamily_Ribosomal_S5_D2-typ_fold,HMMPfam_HSP90
HCFC2	29915	genome.wustl.edu	37	12	104458420	104458420	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013320.2	+1	reviewed	p.A28S	1.000	19	0%	16	43.8%	0	-	probably_damaging(0.967)	deleterious(0.04)	deleterious(0.758)	HMMPfam_Kelch_1,superfamily_Galactose oxidase central domain
HCFC2	29915	genome.wustl.edu	37	12	104492258	104492258	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013320.2	+1	reviewed	p.K626	1.000	63	0%	57	22.8%	5	0%	-	-	-	HMMSmart_SM00060,superfamily_Fibronectin type III
TXNRD1	7296	genome.wustl.edu	37	12	104651816	104651816	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000429002	+1	known	p.S88F	0.075	320	0%	526	25.9%	0	-	possibly_damaging(0.903)	deleterious(0)	deleterious(0.802)	HMMPfam_Glutaredoxin,superfamily_Thioredoxin-like
CHST11	50515	genome.wustl.edu	37	12	105151233	105151233	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018413.5	+1	validated	p.F237	1.000	136	0%	271	35.4%	33	33.3%	-	-	-	HMMPfam_Sulfotransfer_2
CHST11	50515	genome.wustl.edu	37	12	105151530	105151530	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018413.5	+1	validated	p.L336	0.983	56	0%	98	32.7%	27	55.5%	-	-	-	HMMPfam_Sulfotransfer_2
SLC41A2	84102	genome.wustl.edu	37	12	105322201	105322201	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032148.3	-1	validated	p.S35	0.997	110	0%	150	34%	1	0%	-	-	-	NULL
KIAA1033	23325	genome.wustl.edu	37	12	105540892	105540892	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015275.1	+1	validated	p.R828*	1.000	140	0%	184	35.3%	7	14.2%	-	-	-	NULL
LOC341378	341378	genome.wustl.edu	37	12	106565873	106565873	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001715424.1	+1	model	p.K239N	0.989	96	0%	122	29.5%	0	-	-	-	-	NULL
POLR3B	55703	genome.wustl.edu	37	12	106827548	106827548	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018082.5	+1	validated	p.R560Q	1.000	238	0%	239	34.3%	2	50%	probably_damaging(0.992)	deleterious(0.02)	deleterious(0.831)	HMMPfam_RNA_pol_Rpb2_4,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase
POLR3B	55703	genome.wustl.edu	37	12	106850942	106850942	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018082.5	+1	validated	p.N774H	1.000	288	0%	326	34%	4	75%	benign(0.001)	tolerated(0.06)	neutral(0.323)	HMMPfam_RNA_pol_Rpb2_6,superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase
RFX4	5992	genome.wustl.edu	37	12	107109185	107109185	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_213594.1	+1	reviewed	p.R334Q	1.000	120	0%	224	27.2%	0	-	possibly_damaging(0.559)	tolerated(0.07)	deleterious(0.510)	NULL
RFX4	5992	genome.wustl.edu	37	12	107109323	107109323	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_213594.1	+1	reviewed	e11+1	1.000	151	0%	275	31.6%	0	-	-	-	-	-
RFX4	5992	genome.wustl.edu	37	12	107126851	107126851	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_213594.1	+1	reviewed	p.L541I	1.000	188	0%	277	27.4%	0	-	benign(0)	tolerated(0.16)	neutral(0.059)	NULL
CRY1	1407	genome.wustl.edu	37	12	107391315	107391315	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004075.3	-1	validated	p.I481	0.997	203	1%	250	31.6%	21	42.8%	-	-	-	HMMPfam_FAD_binding_7,superfamily_Cryptochrome/photolyase FAD-binding domain
CRY1	1407	genome.wustl.edu	37	12	107393424	107393424	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004075.3	-1	validated	p.R348C	1.000	113	0%	122	36.1%	22	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FAD_binding_7,superfamily_Cryptochrome/photolyase FAD-binding domain
PRDM4	11108	genome.wustl.edu	37	12	108128059	108128059	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012406.3	-1	reviewed	p.S778	0.202	336	0%	470	33.6%	15	60%	-	-	-	NULL
WSCD2	9671	genome.wustl.edu	37	12	108603925	108603925	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014653.2	+1	validated	p.F175	0.999	17	0%	25	32%	0	-	-	-	-	HMMPfam_WSC,HMMSmart_SM00321
WSCD2	9671	genome.wustl.edu	37	12	108620877	108620877	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014653.2	+1	validated	p.S305	0.709	100	0%	102	36.3%	0	-	-	-	-	HMMPfam_WSC,HMMSmart_SM00321
SART3	9733	genome.wustl.edu	37	12	108917263	108917263	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014706.3	-1	reviewed	p.D955N	1.000	122	0%	160	34.4%	54	42.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Lsm_interact
SART3	9733	genome.wustl.edu	37	12	108954655	108954655	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014706.3	-1	reviewed	p.E92D	1.000	129	0%	168	29.8%	21	42.8%	benign(0.096)	tolerated(0.25)	neutral(0.044)	NULL
SELPLG	6404	genome.wustl.edu	37	12	109017754	109017754	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003006.3	-1	reviewed	p.G110	0.000	308	0%	544	34%	12	0%	-	-	-	NULL
SVOP	55530	genome.wustl.edu	37	12	109316479	109316479	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018711.2	-1	validated	p.L321I	0.735	153	0%	226	30.1%	0	-	-	-	-	NULL
ACACB	32	genome.wustl.edu	37	12	109704110	109704110	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001093.3	+1	reviewed	p.A2440	0.112	22	0%	16	50%	3	0%	-	-	-	NULL
UBE3B	89910	genome.wustl.edu	37	12	109939183	109939183	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130466.2	+1	reviewed	p.E376K	1.000	158	0%	217	32.7%	5	40%	benign(0.086)	deleterious(0.02)	neutral(0.390)	NULL
UBE3B	89910	genome.wustl.edu	37	12	109972546	109972546	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130466.2	+1	reviewed	p.R1056C	1.000	55	0%	96	35.4%	19	31.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
GIT2	9815	genome.wustl.edu	37	12	110421246	110421246	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_057169.3	-1	reviewed	p.L185	0.055	240	0%	552	32.1%	4	0%	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
IFT81	28981	genome.wustl.edu	37	12	110565950	110565950	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143779.1	+1	validated	p.D82Y	1.000	84	0%	206	26.2%	5	20%	probably_damaging(0.972)	deleterious(0.01)	deleterious(0.820)	NULL
ATP2A2	488	genome.wustl.edu	37	12	110778478	110778478	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170665.3	+1	reviewed	p.F592	0.971	59	0%	92	32.6%	180	38.8%	-	-	-	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M
ANAPC7	51434	genome.wustl.edu	37	12	110834103	110834103	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016238.2	-1	reviewed	p.T120P	0.996	110	0%	251	36.7%	14	50%	possibly_damaging(0.612)	tolerated(0.06)	deleterious(0.534)	superfamily_TPR-like
RAD9B	144715	genome.wustl.edu	37	12	110944485	110944485	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152442.3	+1	validated	p.F125L	0.996	113	0%	189	32.8%	0	-	benign(0.01)	tolerated(1)	neutral(0.001)	HMMPfam_Rad9,superfamily_DNA clamp
PPTC7	160760	genome.wustl.edu	37	12	110977650	110977650	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139283.1	-1	provisional	p.L235I	1.000	208	0%	357	28.9%	1	0%	benign(0.309)	tolerated(0.13)	neutral(0.349)	HMMSmart_PP2C_SIG,HMMSmart_PP2Cc,superfamily_PP2C-related,HMMPfam_SpoIIE
CCDC63	160762	genome.wustl.edu	37	12	111291336	111291336	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152591.1	+1	provisional	p.K46T	0.921	128	0%	292	33.9%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
ATXN2	6311	genome.wustl.edu	37	12	111893869	111893869	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002973.3	-1	reviewed	p.A1236	0.894	324	0%	754	32.6%	76	47.3%	-	-	-	NULL
ATXN2	6311	genome.wustl.edu	37	12	111951304	111951304	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002973.3	-1	reviewed	p.R632Q	1.000	104	0%	204	24%	16	31.2%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
ACAD10	80724	genome.wustl.edu	37	12	112143677	112143677	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136538.1	+1	reviewed	p.N158H	1.000	159	0%	305	34.4%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Hydrolase,superfamily_HAD-like
ACAD10	80724	genome.wustl.edu	37	12	112150335	112150335	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136538.1	+1	reviewed	p.E273*	0.934	134	0%	243	37%	2	50%	-	-	-	NULL
ERP29	10961	genome.wustl.edu	37	12	112457595	112457595	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006817.3	+1	reviewed	p.F60	1.000	137	0%	192	31.2%	313	20.1%	-	-	-	superfamily_Thiordxn-like_fd,HMMPfam_ERp29_N
TRAFD1	10906	genome.wustl.edu	37	12	112578784	112578784	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143906.1	+1	validated	p.E133D	0.524	112	0%	314	35.4%	24	20.8%	benign(0)	tolerated(0.53)	neutral(0.007)	NULL
TRAFD1	10906	genome.wustl.edu	37	12	112589777	112589777	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143906.1	+1	validated	p.P484	0.763	85	0%	167	32.9%	36	27.7%	-	-	-	NULL
C12orf51	283450	genome.wustl.edu	37	12	112657288	112657288	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001109662.2	-1	validated	p.R1904*	1.000	63	0%	104	28.8%	1	100%	-	-	-	NULL
C12orf51	283450	genome.wustl.edu	37	12	112691858	112691858	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001109662.2	-1	validated	p.D714Y	1.000	130	0%	167	29.9%	0	-	probably_damaging(0.964)	-	-	NULL
RPH3A	22895	genome.wustl.edu	37	12	113285583	113285583	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143854.1	+1	validated	p.E56*	1.000	121	0%	218	23.4%	0	-	-	-	-	HMMPfam_RPH3A_effector,superfamily_FYVE/PHD zinc finger
DTX1	1840	genome.wustl.edu	37	12	113531866	113531866	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004416.2	+1	reviewed	p.R397*	0.909	35	0%	84	42.9%	0	-	-	-	-	superfamily_SSF57850
RASAL1	8437	genome.wustl.edu	37	12	113539774	113539774	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004658.1	-1	reviewed	p.G714	0.977	33	0%	44	18.2%	3	66.6%	-	-	-	NULL
IQCD	115811	genome.wustl.edu	37	12	113645265	113645265	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138451.1	-1	provisional	p.R236I	0.000	94	0%	218	37.6%	12	33.3%	benign(0.037)	tolerated(0.21)	neutral(0.046)	NULL
SLC24A6	80024	genome.wustl.edu	37	12	113745573	113745573	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024959.2	-1	validated	p.R445Q	1.000	39	0%	67	22.4%	15	33.3%	probably_damaging(0.998)	tolerated(0.36)	deleterious(0.494)	HMMPfam_Na_Ca_ex
PLBD2	196463	genome.wustl.edu	37	12	113812778	113812778	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173542.3	+1	validated	p.K275N	1.000	86	0%	170	38.2%	16	37.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Phospholip_B
SDSL	113675	genome.wustl.edu	37	12	113875854	113875854	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138432.2	+1	provisional	p.Q320H	0.322	67	0%	91	39.6%	8	0%	possibly_damaging(0.683)	tolerated(0.11)	deleterious(0.515)	superfamily_PyrdxlP-dep_enz_bsu
TBX5	6910	genome.wustl.edu	37	12	114841626	114841626	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000192.3	-1	reviewed	p.S26	0.000	61	0%	25	16%	0	-	-	-	-	NULL
MED13L	23389	genome.wustl.edu	37	12	116420208	116420208	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015335.3	-1	validated	p.R1719I	1.000	62	0%	84	35.7%	5	40%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_TRAP_240kDa
MED13L	23389	genome.wustl.edu	37	12	116421111	116421111	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015335.3	-1	validated	p.S1589L	0.094	185	0%	203	35.5%	5	20%	unknown(0)	deleterious(0.02)	-	HMMPfam_TRAP_240kDa
MED13L	23389	genome.wustl.edu	37	12	116534497	116534497	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015335.3	-1	validated	p.K152N	1.000	205	0%	244	26.6%	1	0%	probably_damaging(0.98)	tolerated(0.62)	neutral(0.428)	NULL
TESC	54997	genome.wustl.edu	37	12	117494630	117494630	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017899.3	-1	validated	p.R117C	1.000	124	0%	222	41%	12	50%	probably_damaging(0.982)	deleterious(0.02)	deleterious(0.809)	superfamily_EF-hand
FBXO21	23014	genome.wustl.edu	37	12	117615409	117615409	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033624.2	-1	reviewed	p.L170I	1.000	215	0%	260	31.5%	3	0%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	superfamily_F-box domain
NOS1	4842	genome.wustl.edu	37	12	117705854	117705854	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000620.2	-1	reviewed	p.S645	1.000	116	0%	144	12.5%	0	-	-	-	-	HMMPfam_NO_synthase,superfamily_Nitric oxide (NO) synthase oxygenase domain
KSR2	283455	genome.wustl.edu	37	12	118105286	118105286	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173598.4	-1	validated	p.F359L	1.000	99	0%	138	30.4%	0	-	benign(0.119)	tolerated(0.17)	neutral(0.068)	superfamily_Cysteine-rich domain
KSR2	283455	genome.wustl.edu	37	12	118298119	118298119	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173598.4	-1	validated	p.D71N	0.999	49	0%	48	31.2%	0	-	benign(0.001)	tolerated(0.75)	neutral(0.002)	NULL
WSB2	55884	genome.wustl.edu	37	12	118480745	118480745	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018639.3	-1	reviewed	p.D154Y	1.000	90	0%	197	35%	65	43%	probably_damaging(0.988)	deleterious(0.02)	deleterious(0.821)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
PEBP1	5037	genome.wustl.edu	37	12	118575869	118575869	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002567.2	+1	validated	p.S54L	0.003	73	0%	170	28.2%	315	36.5%	benign(0.013)	tolerated(0.09)	neutral(0.297)	HMMPfam_PBP,superfamily_PEBP-like
PEBP1	5037	genome.wustl.edu	37	12	118582391	118582391	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002567.2	+1	validated	p.G116D	1.000	101	0%	133	27.8%	558	48.9%	probably_damaging(0.983)	deleterious(0.02)	deleterious(0.812)	HMMPfam_PBP,superfamily_PEBP-like
SRRM4	84530	genome.wustl.edu	37	12	119592104	119592104	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194286.2	+1	validated	p.A483V	0.000	19	0%	19	36.8%	0	-	possibly_damaging(0.93)	tolerated(0.2)	neutral(0.425)	NULL
CIT	11113	genome.wustl.edu	37	12	120150036	120150036	+	Nonsense_Mutation	SNP	C	C	A	rs34392404		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007174.1	-1	validated	p.E1559*	1.000	278	0%	406	31.8%	2	50%	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
CIT	11113	genome.wustl.edu	37	12	120151412	120151412	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007174.1	-1	validated	p.P1408T	1.000	91	0%	155	27.7%	6	66.6%	probably_damaging(1)	tolerated(0.16)	deleterious(0.559)	HMMPfam_C1_1,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_Cysteine-rich domain
CIT	11113	genome.wustl.edu	37	12	120156645	120156645	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007174.1	-1	validated	p.E1246*	1.000	119	0%	166	33.1%	1	0%	-	-	-	NULL
RAB35	11021	genome.wustl.edu	37	12	120534945	120534945	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000427416	-1	known	p.E106*	1.000	65	0%	189	39.7%	33	45.4%	-	-	-	NULL
RAB35	11021	genome.wustl.edu	37	12	120546259	120546259	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006861.6	-1	validated	p.S22N	1.000	35	0%	89	42.7%	14	28.5%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMSmart_SM00176,PatternScan_SIGMA54_INTERACT_1,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMSmart_SM00177,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
GCN1L1	10985	genome.wustl.edu	37	12	120616703	120616703	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006836.1	-1	validated	p.K159	1.000	49	0%	101	32.7%	12	41.6%	-	-	-	superfamily_ARM repeat
SIRT4	23409	genome.wustl.edu	37	12	120741510	120741510	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012240.1	+1	reviewed	p.R49H	0.999	36	0%	103	37.9%	3	0%	benign(0.036)	tolerated(0.08)	neutral(0.302)	superfamily_SSF52467
COQ5	84274	genome.wustl.edu	37	12	120941404	120941404	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000302223	-1	known	p.L227I	0.004	8	0.000	21	0.429	41	34.1%	unknown(0)	deleterious(0.03)	-	NULL
COQ5	84274	genome.wustl.edu	37	12	120941498	120941498	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000302223	-1	known	p.E195D	0.000	55	0%	112	36.6%	63	39.6%	unknown(0)	tolerated(0.17)	-	NULL
CABP1	9478	genome.wustl.edu	37	12	121088469	121088469	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031205.2	+1	reviewed	p.R10K	1.000	130	0%	237	31.2%	1	0%	benign(0)	tolerated(0.34)	neutral(0.023)	NULL
CABP1	9478	genome.wustl.edu	37	12	121098025	121098025	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033677.1	+1	reviewed	p.D238N	1.000	106	0%	220	27.7%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand
SPPL3	121665	genome.wustl.edu	37	12	121206271	121206271	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139015.3	-1	validated	p.I210	1.000	81	0%	123	37.4%	56	44.6%	-	-	-	HMMSmart_SM00730,HMMPfam_Peptidase_A22B
C12orf43	64897	genome.wustl.edu	37	12	121442123	121442123	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022895.1	-1	predicted	p.A208T	0.003	231	0%	363	33.3%	8	12.5%	benign(0.011)	tolerated(0.39)	neutral(0.017)	NULL
P2RX7	5027	genome.wustl.edu	37	12	121603921	121603921	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002562.4	+1	reviewed	p.Q225	1.000	256	0%	509	34.8%	1	0%	-	-	-	HMMPfam_P2X_receptor
P2RX7	5027	genome.wustl.edu	37	12	121615111	121615111	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002562.4	+1	reviewed	p.F350L	0.842	140	0%	288	33.7%	1	0%	benign(0)	tolerated(1)	-	HMMPfam_P2X_receptor
CAMKK2	10645	genome.wustl.edu	37	12	121681927	121681927	+	Nonstop_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172214.2	-1	reviewed	p.*534Y	0.000	94	0%	264	37.5%	0	-	-	-	-	NULL
CAMKK2	10645	genome.wustl.edu	37	12	121701662	121701662	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006549.3	-1	reviewed	p.E236K	1.000	73	0%	92	26.1%	7	71.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
KDM2B	84678	genome.wustl.edu	37	12	121947541	121947541	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032590.4	-1	reviewed	p.K492N	1.000	124	0%	208	36.5%	5	40%	benign(0.206)	tolerated(0.43)	neutral(0.034)	NULL
BCL7A	605	genome.wustl.edu	37	12	122468670	122468670	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020993.3	+1	reviewed	p.E53K	1.000	123	0%	214	28.5%	10	60%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	HMMPfam_BCL_N
CLIP1	6249	genome.wustl.edu	37	12	122758593	122758593	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002956.2	-1	validated	p.N1350	0.040	162	0%	281	32.7%	30	43.3%	-	-	-	NULL
RSRC2	65117	genome.wustl.edu	37	12	122990178	122990178	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023012.4	-1	validated	p.R401*	0.937	216	0%	372	32.8%	74	31%	-	-	-	NULL
HCAR3	8843	genome.wustl.edu	37	12	123201154	123201154	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006018.2	-1	validated	p.G44D	1.000	105	0%	242	33.1%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
CCDC62	84660	genome.wustl.edu	37	12	123285825	123285825	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201435.3	+1	validated	p.E378*	0.688	82	0%	233	20.6%	1	100%	-	-	-	NULL
HIP1R	9026	genome.wustl.edu	37	12	123340116	123340116	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003959.1	+1	validated	p.D338N	0.969	61	0%	67	31.3%	18	44.4%	benign(0.036)	tolerated(0.16)	neutral(0.061)	NULL
HIP1R	9026	genome.wustl.edu	37	12	123340144	123340144	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003959.1	+1	validated	p.S347F	0.885	62	0%	71	33.8%	18	50%	possibly_damaging(0.801)	tolerated(0.06)	deleterious(0.624)	NULL
OGFOD2	79676	genome.wustl.edu	37	12	123463411	123463411	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024623.1	+1	provisional	p.D155N	1.000	18	0.000	9	0.667	11	72.7%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	HMMPfam_2OG-FeII_Oxy,HMMSmart_P4Hc
MPHOSPH9	10198	genome.wustl.edu	37	12	123686834	123686834	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022782.2	-1	validated	p.R453Q	0.999	107	0%	196	29.6%	0	-	probably_damaging(0.994)	deleterious(0.02)	deleterious(0.835)	NULL
SBNO1	55206	genome.wustl.edu	37	12	123789165	123789165	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018183.3	-1	validated	p.L1243F	1.000	99	0%	103	36.9%	22	45.4%	probably_damaging(0.991)	tolerated(0.71)	neutral(0.446)	NULL
DDX55	57696	genome.wustl.edu	37	12	124090481	124090481	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020936.1	+1	reviewed	p.A38T	1.000	111	0%	269	29%	13	23%	benign(0.117)	deleterious(0)	neutral(0.454)	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH10	196385	genome.wustl.edu	37	12	124281333	124281333	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207437.3	+1	validated	p.R588Q	0.235	127	0%	291	25.8%	0	-	possibly_damaging(0.671)	tolerated(0.59)	neutral(0.242)	HMMPfam_DHC_N1
DNAH10	196385	genome.wustl.edu	37	12	124284841	124284841	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207437.3	+1	validated	p.E672*	1.000	157	0%	188	42%	0	-	-	-	-	HMMPfam_DHC_N1
DNAH10	196385	genome.wustl.edu	37	12	124297863	124297863	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207437.3	+1	validated	p.R981	0.868	154	0%	281	29.2%	0	-	-	-	-	NULL
DNAH10	196385	genome.wustl.edu	37	12	124330340	124330340	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207437.3	+1	validated	p.D1734N	1.000	130	0%	283	27.2%	0	-	benign(0.008)	tolerated(0.08)	neutral(0.300)	NULL
DNAH10	196385	genome.wustl.edu	37	12	124333349	124333349	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207437.3	+1	validated	p.D1890N	1.000	250	0%	403	32.5%	0	-	benign(0.089)	tolerated(0.15)	neutral(0.247)	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH10	196385	genome.wustl.edu	37	12	124352046	124352046	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207437.3	+1	validated	p.E2282D	0.956	182	0%	320	38.1%	0	-	benign(0.003)	tolerated(0.63)	neutral(0.004)	NULL
DNAH10	196385	genome.wustl.edu	37	12	124362347	124362347	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207437.3	+1	validated	p.K2637T	0.377	174	0%	300	33%	0	-	benign(0.004)	tolerated(0.24)	neutral(0.037)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH10	196385	genome.wustl.edu	37	12	124408892	124408892	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207437.3	+1	validated	p.E3775	1.000	153	0%	215	34.9%	0	-	-	-	-	HMMPfam_Dynein_heavy
NCOR2	9612	genome.wustl.edu	37	12	124841219	124841219	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006312.3	-1	validated	p.P1077	0.222	33	0%	79	32.9%	33	45.4%	-	-	-	NULL
TMEM132B	114795	genome.wustl.edu	37	12	126138876	126138876	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052907.2	+1	provisional	p.E953*	1.000	137	0%	148	27.7%	1	0%	-	-	-	NULL
SLC15A4	121260	genome.wustl.edu	37	12	129283882	129283882	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145648.3	-1	validated	p.G499R	1.000	102	0%	169	38.5%	20	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_MULTICOPPER_OXIDASE1,superfamily_MFS general substrate transporter
TMEM132D	121256	genome.wustl.edu	37	12	129822313	129822313	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133448.2	-1	validated	p.E389*	0.710	51	0%	44	27.3%	0	-	-	-	-	NULL
PIWIL1	9271	genome.wustl.edu	37	12	130831058	130831058	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004764.3	+1	reviewed	p.E154K	1.000	175	0%	223	35%	0	-	benign(0.347)	tolerated(0.46)	neutral(0.122)	superfamily_PAZ domain
PIWIL1	9271	genome.wustl.edu	37	12	130834455	130834455	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004764.3	+1	reviewed	p.K329N	0.974	141	0%	186	34.9%	2	50%	benign(0.001)	tolerated(0.45)	neutral(0.012)	HMMPfam_PAZ,superfamily_PAZ domain
GPR133	283383	genome.wustl.edu	37	12	131561348	131561348	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198827.3	+1	validated	p.T492	0.004	79	0%	129	31%	0	-	-	-	-	NULL
GPR133	283383	genome.wustl.edu	37	12	131605455	131605455	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198827.3	+1	validated	p.I724	0.214	129	0%	175	38.3%	0	-	-	-	-	HMMPfam_7tm_2
MMP17	4326	genome.wustl.edu	37	12	132322761	132322761	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016155.4	+1	reviewed	p.Y61H	1.000	34	0%	28	35.7%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PG_binding_1,superfamily_PGBD-like
P2RX2	22953	genome.wustl.edu	37	12	133197859	133197859	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170683.2	+1	reviewed	p.K308	0.000	63	0%	94	34%	0	-	-	-	-	HMMPfam_P2X_receptor
POLE	5426	genome.wustl.edu	37	12	133241911	133241911	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006231.2	-1	validated	p.F815L	1.000	78	0%	100	35%	9	22.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DNA_pol_B,HMMSmart_POLBc,superfamily_SSF56672
POLE	5426	genome.wustl.edu	37	12	133253184	133253184	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006231.2	-1	validated	p.P286R	1.000	113	0%	170	30.6%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DNA_pol_B_exo,HMMSmart_POLBc,superfamily_RNaseH_fold
ZNF10	7556	genome.wustl.edu	37	12	133732297	133732297	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015394.4	+1	reviewed	p.K155N	1.000	147	0%	273	35.2%	2	100%	possibly_damaging(0.877)	tolerated(0.42)	neutral(0.356)	NULL
ZNF268	10795	genome.wustl.edu	37	12	133764634	133764634	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003415.2	+1	validated	p.E70	0.002	106	0%	131	21.4%	1	0%	-	-	-	NULL
ZNF268	10795	genome.wustl.edu	37	12	133779747	133779747	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003415.2	+1	validated	p.R492I	1.000	104	0%	92	30.4%	3	0%	probably_damaging(1)	tolerated(0.18)	deleterious(0.556)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
TPTE2	93492	genome.wustl.edu	37	13	20024439	20024439	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199254.2	-1	validated	p.R283I	0.705	258	0%	241	32.8%	0	-	possibly_damaging(0.618)	tolerated(0.14)	neutral(0.465)	superfamily_(Phosphotyrosine protein) phosphatases II
TPTE2	93492	genome.wustl.edu	37	13	20049725	20049725	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199254.2	-1	validated	p.S73F	0.064	115	0%	135	29.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Voltage-gated potassium channels
ZMYM2	7750	genome.wustl.edu	37	13	20656935	20656935	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003453.2	+1	validated	p.R1195*	1.000	72	0%	150	38%	44	25%	-	-	-	NULL
GJB2	2706	genome.wustl.edu	37	13	20763271	20763271	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004004.5	-1	reviewed	p.F150L	1.000	104	0%	147	34.7%	31	25.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Connexin_CCC
N6AMT2	221143	genome.wustl.edu	37	13	21306205	21306205	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174928.1	-1	provisional	p.E95*	0.350	106	0%	207	36.7%	1	0%	-	-	-	HMMPfam_DPPF
N6AMT2	221143	genome.wustl.edu	37	13	21311878	21311878	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174928.1	-1	provisional	p.V71L	0.618	90	0%	131	30.5%	3	33.3%	benign(0.001)	tolerated(0.31)	neutral(0.027)	HMMPfam_DPPF
XPO4	64328	genome.wustl.edu	37	13	21370950	21370950	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022459.4	-1	validated	p.E857*	1.000	96	0%	109	31.2%	0	-	-	-	-	superfamily_ARM-type_fold
XPO4	64328	genome.wustl.edu	37	13	21383304	21383304	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022459.4	-1	validated	p.R471*	1.000	143	0.7%	201	32.3%	3	66.6%	-	-	-	superfamily_ARM-type_fold
XPO4	64328	genome.wustl.edu	37	13	21395946	21395946	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022459.4	-1	validated	p.R357L	1.000	223	0%	369	36.9%	1	100%	benign(0.12)	tolerated(0.33)	neutral(0.034)	superfamily_ARM-type_fold
LATS2	26524	genome.wustl.edu	37	13	21620000	21620000	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014572.2	-1	reviewed	p.D56Y	1.000	163	0%	248	37.1%	6	33.3%	possibly_damaging(0.762)	deleterious(0)	deleterious(0.727)	NULL
SKA3	221150	genome.wustl.edu	37	13	21746603	21746603	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000314759	-1	known	p.N69T	0.965	86	0%	170	34.7%	4	100%	benign(0)	tolerated(0.3)	neutral(0.029)	NULL
SGCG	6445	genome.wustl.edu	37	13	23777890	23777890	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000231.2	+1	reviewed	p.E19D	1.000	268	0%	377	35%	0	-	benign(0.273)	tolerated(0.33)	neutral(0.053)	NULL
SACS	26278	genome.wustl.edu	37	13	23907329	23907329	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014363.4	-1	reviewed	p.F3562L	1.000	103	0%	88	27.3%	1	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
SACS	26278	genome.wustl.edu	37	13	23910132	23910132	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014363.4	-1	reviewed	p.S2628Y	1.000	195	0%	149	32.9%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
SACS	26278	genome.wustl.edu	37	13	23910760	23910760	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014363.4	-1	reviewed	p.E2419K	1.000	146	0%	65	35.4%	0	-	benign(0.133)	tolerated(0.17)	neutral(0.070)	NULL
SACS	26278	genome.wustl.edu	37	13	23911754	23911754	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014363.4	-1	reviewed	p.E2087	0.964	44	0%	59	40.7%	1	0%	-	-	-	NULL
SACS	26278	genome.wustl.edu	37	13	23912751	23912751	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014363.4	-1	reviewed	p.K1755T	1.000	150	0%	125	32%	0	-	benign(0.109)	tolerated(0.12)	neutral(0.269)	NULL
SACS	26278	genome.wustl.edu	37	13	23915089	23915089	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014363.4	-1	reviewed	p.R976C	1.000	109	0%	108	28.7%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
SACS	26278	genome.wustl.edu	37	13	23915369	23915369	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014363.4	-1	reviewed	p.K882N	1.000	241	0%	249	24.1%	0	-	benign(0.001)	tolerated(0.33)	neutral(0.024)	NULL
SACS	26278	genome.wustl.edu	37	13	23930115	23930115	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000455470	-1	known	p.R112W	1.000	91	0%	139	33.1%	0	-	-	-	-	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
MIPEP	4285	genome.wustl.edu	37	13	24444223	24444223	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005932.2	-1	reviewed	p.R239C	0.687	145	0%	211	30.3%	16	56.2%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	superfamily_SSF55486
C1QTNF9B	387911	genome.wustl.edu	37	13	24465598	24465598	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007537.1	-1	provisional	p.D278Y	1.000	247	0%	416	36.1%	6	16.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_C1q,HMMSmart_SM00110,superfamily_TNF-like
ANKRD20A19P	400110	genome.wustl.edu	37	13	24515473	24515473	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001715330.2	-1	model	p.K212E	0.001	80	0%	154	42.2%	0	-	-	-	-	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
ATP12A	479	genome.wustl.edu	37	13	25255774	25255774	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001676.5	+1	reviewed	p.K28N	0.949	114	0%	242	30.6%	0	-	possibly_damaging(0.772)	tolerated(0.1)	deleterious(0.573)	NULL
ATP12A	479	genome.wustl.edu	37	13	25272961	25272961	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001676.5	+1	reviewed	p.L560M	1.000	73	0%	124	41.9%	0	-	probably_damaging(0.999)	tolerated(0.09)	deleterious(0.787)	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M
ATP12A	479	genome.wustl.edu	37	13	25280477	25280477	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001676.5	+1	reviewed	p.G682D	1.000	126	0%	178	34.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Calcium ATPase transmembrane domain M
ATP12A	479	genome.wustl.edu	37	13	25281474	25281474	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001676.5	+1	reviewed	p.I799S	1.000	238	0%	387	33.9%	0	-	probably_damaging(0.994)	deleterious(0.03)	deleterious(0.817)	superfamily_Calcium ATPase transmembrane domain M
RNF17	56163	genome.wustl.edu	37	13	25362263	25362263	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031277.2	+1	reviewed	p.S250L	0.740	88	0%	55	30.9%	0	-	benign(0.026)	deleterious(0.02)	neutral(0.384)	NULL
RNF17	56163	genome.wustl.edu	37	13	25417895	25417895	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031277.2	+1	reviewed	p.D873Y	0.988	107	0%	89	27%	0	-	possibly_damaging(0.931)	deleterious(0.01)	deleterious(0.783)	NULL
RNF17	56163	genome.wustl.edu	37	13	25418797	25418797	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031277.2	+1	reviewed	p.E947*	1.000	179	0%	259	32.4%	0	-	-	-	-	HMMPfam_TUDOR
RNF17	56163	genome.wustl.edu	37	13	25424529	25424529	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031277.2	+1	reviewed	p.S1051*	1.000	179	0%	260	31.2%	0	-	-	-	-	NULL
FAM123A	219287	genome.wustl.edu	37	13	25744542	25744542	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152704.2	-1	validated	p.P406S	0.993	43	0%	53	41.5%	0	-	benign(0.312)	tolerated(0.13)	neutral(0.350)	HMMPfam_WTX
ATP8A2	51761	genome.wustl.edu	37	13	26104781	26104781	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016529.4	+1	validated	p.E135K	1.000	251	0%	227	25.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_E1-E2_ATPase
ATP8A2	51761	genome.wustl.edu	37	13	26125475	26125475	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016529.4	+1	validated	e11-1	1.000	198	0.5%	354	34.2%	0	-	-	-	-	-
RNF6	6049	genome.wustl.edu	37	13	26788304	26788304	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005977.3	-1	reviewed	p.R572Q	0.076	136	0%	168	33.3%	15	46.6%	benign(0.001)	tolerated(0.09)	neutral(0.296)	NULL
WASF3	10810	genome.wustl.edu	37	13	27246057	27246057	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006646.5	+1	reviewed	p.F157L	1.000	163	0%	255	32.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
USP12	219333	genome.wustl.edu	37	13	27649407	27649407	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182488.2	-1	provisional	p.R285C	1.000	133	0%	225	29.3%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_UCH,superfamily_SSF54001
RPL21	6144	genome.wustl.edu	37	13	27829397	27829397	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000982.3	+1	reviewed	p.K50Q	1.000	204	0%	381	39.1%	384	43.2%	possibly_damaging(0.924)	deleterious(0.01)	deleterious(0.778)	HMMPfam_Ribosomal_L21e,superfamily_Translation proteins SH3-like domain,PatternScan_RIBOSOMAL_L21E
RASL11A	387496	genome.wustl.edu	37	13	27847448	27847448	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206827.1	+1	provisional	p.Y182	0.474	65	0%	145	31%	4	0%	-	-	-	superfamily_SSF52540
MTIF3	219402	genome.wustl.edu	37	13	28009825	28009825	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152912.4	-1	reviewed	p.V275A	0.000	266	0.4%	385	27.5%	36	33.3%	possibly_damaging(0.702)	deleterious(0.01)	deleterious(0.658)	NULL
LNX2	222484	genome.wustl.edu	37	13	28141902	28141902	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153371.3	-1	validated	p.Q244K	0.999	253	0%	283	31.8%	9	44.4%	benign(0.017)	tolerated(0.62)	neutral(0.005)	HMMPfam_PDZ,HMMSmart_PDZ,superfamily_PDZ
FLT1	2321	genome.wustl.edu	37	13	29008038	29008038	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002019.4	-1	reviewed	p.R244I	0.008	181	0%	230	35.2%	4	0%	possibly_damaging(0.847)	tolerated(0.09)	deleterious(0.621)	HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Immunoglobulin
MTUS2	23281	genome.wustl.edu	37	13	30014172	30014172	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033602.2	+1	validated	p.I1067S	1.000	227	0%	301	30.6%	2	100%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
KATNAL1	84056	genome.wustl.edu	37	13	30857784	30857784	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014380.1	-1	validated	p.R44K	1.000	301	0%	361	32.7%	0	-	probably_damaging(0.974)	tolerated(0.63)	neutral(0.419)	NULL
USPL1	10208	genome.wustl.edu	37	13	31233381	31233381	+	Missense_Mutation	SNP	C	C	T	rs148894312	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005800.4	+1	validated	p.P1056L	0.010	165	0%	214	33.2%	11	9%	possibly_damaging(0.883)	deleterious(0.01)	deleterious(0.750)	NULL
ALOX5AP	241	genome.wustl.edu	37	13	31326240	31326240	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001629.2	+1	reviewed	p.A74	0.013	372	0.3%	613	36.7%	15	0%	-	-	-	HMMPfam_MAPEG
C13orf33	84935	genome.wustl.edu	37	13	31491631	31491631	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032849.3	+1	validated	p.K124E	0.057	197	0%	244	34%	1	0%	benign(0)	tolerated(0.18)	neutral(0.056)	NULL
C13orf33	84935	genome.wustl.edu	37	13	31498456	31498456	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032849.3	+1	validated	p.D266Y	1.000	254	0%	377	34.2%	3	0%	-	-	-	NULL
HSPH1	10808	genome.wustl.edu	37	13	31725284	31725284	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000439123	-1	known	p.R89*	1.000	224	0%	139	33.1%	66	45.4%	-	-	-	NULL
RXFP2	122042	genome.wustl.edu	37	13	32340095	32340095	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130806.3	+1	reviewed	p.S143Y	1.000	209	0%	136	27.9%	0	-	benign(0.334)	tolerated(1)	neutral(0.105)	HMMSmart_SM00369,superfamily_L domain-like
RXFP2	122042	genome.wustl.edu	37	13	32349504	32349504	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130806.3	+1	reviewed	p.D207Y	1.000	302	0%	301	28.6%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_L domain-like
RXFP2	122042	genome.wustl.edu	37	13	32360739	32360739	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130806.3	+1	reviewed	p.K346N	0.992	263	0%	213	28.6%	0	-	benign(0.045)	tolerated(0.58)	neutral(0.007)	HMMSmart_SM00369,superfamily_L domain-like
RXFP2	122042	genome.wustl.edu	37	13	32365959	32365959	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130806.3	+1	reviewed	p.R388*	1.000	325	0%	430	28.4%	0	-	-	-	-	superfamily_L domain-like,superfamily_Family A G protein-coupled receptor-like
FRY	10129	genome.wustl.edu	37	13	32749726	32749726	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023037.2	+1	validated	p.S793Y	1.000	306	0%	366	30.3%	0	-	benign(0.412)	deleterious(0)	deleterious(0.578)	NULL
FRY	10129	genome.wustl.edu	37	13	32799169	32799169	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023037.2	+1	validated	p.F1672L	1.000	292	0%	347	34.9%	1	0%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
BRCA2	675	genome.wustl.edu	37	13	32907059	32907059	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000059.3	+1	reviewed	p.L482I	0.000	68	0%	78	42.3%	0	-	benign(0.004)	tolerated(0.42)	neutral(0.014)	NULL
BRCA2	675	genome.wustl.edu	37	13	32913198	32913198	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000059.3	+1	reviewed	p.Y1569C	0.013	27	0%	66	25.8%	0	-	possibly_damaging(0.924)	deleterious(0.01)	deleterious(0.778)	NULL
BRCA2	675	genome.wustl.edu	37	13	32914550	32914550	+	Missense_Mutation	SNP	G	G	A	rs80358842		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000059.3	+1	reviewed	p.E2020K	0.000	53	0%	51	25.5%	0	-	probably_damaging(0.978)	tolerated(0.07)	deleterious(0.740)	NULL
BRCA2	675	genome.wustl.edu	37	13	32945129	32945129	+	Missense_Mutation	SNP	C	C	T	rs80359104		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000059.3	+1	reviewed	p.R2842C	1.000	110	0%	159	23.3%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Tower,superfamily_Nucleic_acid_OB,superfamily_SSF81878
N4BP2L2	10443	genome.wustl.edu	37	13	33016894	33016894	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033111.3	-1	validated	p.Y594D	0.000	39	0%	73	32.9%	13	38.4%	possibly_damaging(0.776)	tolerated(0.35)	neutral(0.310)	NULL
N4BP2L2	10443	genome.wustl.edu	37	13	33017158	33017158	+	Missense_Mutation	SNP	G	G	A	rs17077569	byCluster;byFrequency;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033111.3	-1	validated	p.R506C	0.000	287	0.7%	491	28.3%	8	50%	benign(0.016)	tolerated(0.13)	neutral(0.253)	NULL
PDS5B	23047	genome.wustl.edu	37	13	33250043	33250043	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015032.3	+1	reviewed	p.K303N	1.000	221	0%	226	35.8%	1	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_ARM repeat
PDS5B	23047	genome.wustl.edu	37	13	33316753	33316753	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015032.3	+1	reviewed	p.R834*	1.000	202	0%	220	28.2%	4	25%	-	-	-	superfamily_ARM repeat
PDS5B	23047	genome.wustl.edu	37	13	33344892	33344892	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015032.3	+1	reviewed	p.K1389Q	0.947	149	0%	228	33.8%	9	44.4%	unknown(0)	tolerated(0.25)	-	NULL
KL	9365	genome.wustl.edu	37	13	33635692	33635692	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004795.3	+1	reviewed	p.D826Y	0.026	116	0%	199	30.7%	0	-	possibly_damaging(0.682)	tolerated(0.06)	deleterious(0.566)	HMMPfam_Glyco_hydro_1,superfamily_(Trans)glycosidases
KL	9365	genome.wustl.edu	37	13	33638011	33638011	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004795.3	+1	reviewed	p.L909	0.705	228	0%	256	35.2%	0	-	-	-	-	HMMPfam_Glyco_hydro_1,superfamily_(Trans)glycosidases
STARD13	90627	genome.wustl.edu	37	13	33692366	33692366	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178006.3	-1	validated	p.R706Q	1.000	140	0%	146	33.6%	5	0%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
NBEA	26960	genome.wustl.edu	37	13	35782974	35782974	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015678.4	+1	validated	p.S1835I	1.000	118	0%	81	35.8%	0	-	possibly_damaging(0.543)	deleterious(0)	deleterious(0.629)	superfamily_ARM repeat
NBEA	26960	genome.wustl.edu	37	13	36125116	36125116	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015678.4	+1	validated	p.V2251	0.982	212	0%	209	30.1%	1	0%	-	-	-	superfamily_ARM repeat,superfamily_PH domain-like
NBEA	26960	genome.wustl.edu	37	13	36129196	36129196	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015678.4	+1	validated	p.E2293D	1.000	213	0%	193	35.2%	1	0%	possibly_damaging(0.747)	deleterious(0.01)	deleterious(0.679)	HMMPfam_Beach,superfamily_BEACH domain,superfamily_ARM repeat
DCLK1	9201	genome.wustl.edu	37	13	36348746	36348746	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000360631	-1	known	p.E717K	1.000	98	0%	129	38.8%	2	100%	benign(0.076)	tolerated(0.05)	neutral(0.351)	NULL
DCLK1	9201	genome.wustl.edu	37	13	36700097	36700097	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004734.3	-1	validated	p.R60C	1.000	86	0%	122	31.1%	4	25%	possibly_damaging(0.548)	deleterious(0)	deleterious(0.631)	HMMSmart_DCX,superfamily_SSF89837
CCDC169	728591	genome.wustl.edu	37	13	36822757	36822757	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144981.1	-1	validated	p.E177D	0.997	174	0%	133	34.6%	0	-	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	NULL
SPG20	23111	genome.wustl.edu	37	13	36903576	36903576	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142294.1	-1	reviewed	p.E363*	0.584	449	0%	648	36%	19	10.5%	-	-	-	NULL
CCNA1	8900	genome.wustl.edu	37	13	37012892	37012892	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003914.3	+1	reviewed	p.R261*	0.047	153	0%	168	37.5%	6	0%	-	-	-	HMMSmart_SM00385,HMMPfam_Cyclin_N,PatternScan_CYCLINS,superfamily_Cyclin-like
RFXAP	5994	genome.wustl.edu	37	13	37394091	37394091	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000538.3	+1	reviewed	p.L199	0.992	41	0%	66	27.3%	6	50%	-	-	-	NULL
SMAD9	4093	genome.wustl.edu	37	13	37441423	37441423	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127217.2	-1	reviewed	p.S256	0.013	155	0%	268	31%	0	-	-	-	-	superfamily_SMAD/FHA domain
SMAD9	4093	genome.wustl.edu	37	13	37447042	37447042	+	Silent	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127217.2	-1	reviewed	p.P141	0.016	167	0%	260	34.6%	1	0%	-	-	-	NULL
FAM48A	55578	genome.wustl.edu	37	13	37583813	37583813	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014286.2	-1	validated	p.F779C	0.998	221	0%	291	36.8%	88	44.3%	unknown(0)	deleterious(0)	-	NULL
POSTN	10631	genome.wustl.edu	37	13	38154004	38154004	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006475.2	-1	validated	p.L552M	0.998	231	0.9%	290	30.7%	48	10.4%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Fasciclin,HMMSmart_SM00554,superfamily_FAS1 domain
FREM2	341640	genome.wustl.edu	37	13	39265449	39265449	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207361.4	+1	reviewed	p.N1323T	0.973	153	0%	172	37.8%	1	0%	benign(0)	tolerated(1)	-	NULL
FREM2	341640	genome.wustl.edu	37	13	39448622	39448622	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207361.4	+1	reviewed	p.S2727Y	0.935	188	0%	217	39.2%	4	25%	benign(0.016)	tolerated(0.93)	neutral(0.001)	NULL
STOML3	161003	genome.wustl.edu	37	13	39564825	39564825	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145286.2	-1	validated	p.D12Y	0.693	273	0%	326	29.1%	0	-	benign(0.051)	deleterious(0.01)	neutral(0.409)	NULL
PROSER1	80209	genome.wustl.edu	37	13	39588588	39588588	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025138.3	-1	validated	p.L267	0.997	216	0.5%	417	34.8%	25	40%	-	-	-	NULL
PROSER1	80209	genome.wustl.edu	37	13	39591665	39591665	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025138.3	-1	validated	p.S249	0.818	181	0%	164	31.1%	18	61.1%	-	-	-	NULL
PROSER1	80209	genome.wustl.edu	37	13	39598627	39598627	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025138.3	-1	validated	p.L183I	1.000	292	0%	201	36.3%	19	47.3%	probably_damaging(0.971)	tolerated(0.3)	neutral(0.442)	NULL
MRPS31	10240	genome.wustl.edu	37	13	41345204	41345204	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005830.3	-1	reviewed	p.S23	0.002	40	0%	141	44%	6	0%	-	-	-	NULL
ELF1	1997	genome.wustl.edu	37	13	41515330	41515330	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172373.3	-1	reviewed	p.R328Q	0.974	271	0%	340	31.2%	13	30.7%	possibly_damaging(0.756)	tolerated(0.58)	neutral(0.284)	NULL
ELF1	1997	genome.wustl.edu	37	13	41525537	41525537	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172373.3	-1	reviewed	p.E97*	1.000	88	0%	114	30.7%	12	25%	-	-	-	NULL
WBP4	11193	genome.wustl.edu	37	13	41654879	41654879	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007187.3	+1	reviewed	p.S285L	0.838	102	0%	180	31.7%	11	18.1%	benign(0.001)	tolerated(0.17)	neutral(0.059)	NULL
KBTBD6	89890	genome.wustl.edu	37	13	41704831	41704831	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152903.4	-1	validated	p.Q606R	1.000	207	0%	486	38.5%	2	0%	benign(0.4)	deleterious(0.03)	deleterious(0.493)	NULL
NAA16	79612	genome.wustl.edu	37	13	41943243	41943243	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024561.4	+1	validated	p.E591*	1.000	187	0%	219	28.8%	1	100%	-	-	-	superfamily_TPR-like
KIAA0564	23078	genome.wustl.edu	37	13	42293879	42293879	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015058.1	-1	validated	e26-1	1.000	181	0%	99	39.4%	0	-	-	-	-	-
KIAA0564	23078	genome.wustl.edu	37	13	42465557	42465557	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015058.1	-1	validated	p.R217Q	1.000	157	0%	154	32.5%	1	0%	benign(0)	tolerated(0.57)	neutral(0.006)	HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases
DGKH	160851	genome.wustl.edu	37	13	42773954	42773954	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178009.2	+1	reviewed	p.R801Q	1.000	118	0%	165	30.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DAGK_acc,HMMSmart_SM00045
TNFSF11	8600	genome.wustl.edu	37	13	43155327	43155327	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003701.3	+1	reviewed	p.E95D	0.348	142	0%	172	36.6%	0	-	benign(0.418)	deleterious(0.03)	deleterious(0.500)	NULL
TNFSF11	8600	genome.wustl.edu	37	13	43180773	43180773	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003701.3	+1	reviewed	p.H225N	1.000	189	0%	267	36.3%	0	-	probably_damaging(0.999)	tolerated(0.2)	deleterious(0.539)	HMMPfam_TNF,HMMSmart_SM00207,superfamily_TNF-like
TSC22D1	8848	genome.wustl.edu	37	13	45147544	45147544	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000486464	-1	known	p.D39N	0.963	106	0%	151	31.1%	26	46.1%	-	-	-	NULL
COG3	83548	genome.wustl.edu	37	13	46083907	46083907	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031431.2	+1	reviewed	p.R559*	1.000	189	0%	324	36.4%	8	0%	-	-	-	NULL
FAM194B	220081	genome.wustl.edu	37	13	46135623	46135623	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182542.2	-1	predicted	p.L430V	0.000	414	0%	558	32.1%	0	-	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	NULL
FAM194B	220081	genome.wustl.edu	37	13	46170583	46170583	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182542.2	-1	predicted	p.E186D	0.001	409	0%	502	36.1%	0	-	possibly_damaging(0.741)	tolerated(0.14)	deleterious(0.521)	NULL
ZC3H13	23091	genome.wustl.edu	37	13	46541939	46541939	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015070.3	-1	validated	p.R1341*	0.982	610	0%	592	31.8%	14	21.4%	-	-	-	NULL
CPB2	1361	genome.wustl.edu	37	13	46641446	46641446	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001872.3	-1	reviewed	p.K233R	1.000	247	0%	270	24.8%	0	-	benign(0.126)	deleterious(0.02)	neutral(0.394)	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases
KIAA0226L	80183	genome.wustl.edu	37	13	46923481	46923481	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025113.2	-1	validated	p.E524G	0.991	82	0%	152	32.9%	2	100%	possibly_damaging(0.795)	tolerated(0.32)	neutral(0.323)	NULL
NUDT15	55270	genome.wustl.edu	37	13	48615227	48615227	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018283.1	+1	provisional	p.K110N	1.000	119	0%	157	29.3%	9	33.3%	benign(0.213)	tolerated(0.14)	neutral(0.271)	HMMPfam_NUDIX,superfamily_Nudix
RB1	5925	genome.wustl.edu	37	13	48916752	48916752	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000321.2	+1	reviewed	p.K94N	1.000	105	0%	106	33%	1	0%	benign(0.068)	tolerated(0.24)	neutral(0.042)	NULL
RB1	5925	genome.wustl.edu	37	13	49030385	49030385	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000321.2	+1	reviewed	p.T620	0.620	199	0%	230	35.2%	10	30%	-	-	-	NULL
CYSLTR2	57105	genome.wustl.edu	37	13	49281064	49281064	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020377.2	+1	reviewed	p.K37N	0.016	187	0%	133	32.3%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_Family A G protein-coupled receptor-like
CAB39L	81617	genome.wustl.edu	37	13	49924940	49924940	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079670.1	-1	validated	p.F168L	1.000	135	0%	188	11.7%	5	0%	possibly_damaging(0.523)	deleterious(0.03)	deleterious(0.541)	HMMPfam_Mo25,superfamily_ARM-type_fold
SETDB2	83852	genome.wustl.edu	37	13	50062690	50062690	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031915.2	+1	validated	p.S626Y	0.002	84	0%	105	37.1%	17	47%	probably_damaging(0.958)	deleterious(0)	deleterious(0.846)	HMMPfam_SET,HMMSmart_SM00317,superfamily_SET domain
INTS6	26512	genome.wustl.edu	37	13	51950259	51950259	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012141.2	-1	reviewed	p.L552I	1.000	247	0%	266	28.6%	7	57.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ALG11	440138	genome.wustl.edu	37	13	52598175	52598175	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004127.1	+1	provisional	p.G103	0.027	161	0%	298	33.9%	2	0%	-	-	-	superfamily_SSF53756
ALG11	440138	genome.wustl.edu	37	13	52602604	52602604	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004127.1	+1	provisional	p.L453I	1.000	103	0%	138	37%	9	22.2%	possibly_damaging(0.911)	tolerated(0.38)	neutral(0.381)	HMMPfam_Glycos_transf_1,superfamily_SSF53756
NEK5	341676	genome.wustl.edu	37	13	52650264	52650264	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199289.1	-1	provisional	p.L555V	1.000	308	0%	389	24.9%	0	-	possibly_damaging(0.494)	deleterious(0)	deleterious(0.609)	NULL
CKAP2	26586	genome.wustl.edu	37	13	53049109	53049109	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098525.1	+1	validated	p.R629*	0.795	91	0%	132	32.6%	31	45.1%	-	-	-	NULL
PCDH17	27253	genome.wustl.edu	37	13	58299080	58299080	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040429.2	+1	reviewed	p.I1044	0.106	121	0%	102	25.5%	1	0%	-	-	-	NULL
LOC341689	341689	genome.wustl.edu	37	13	59104179	59104179	+	RNA	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_017487.3	+1	model	NULL	0.044	66	0%	80	26.3%	0	-	-	-	-	-
DIAPH3	81624	genome.wustl.edu	37	13	60453483	60453483	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042517.1	-1	validated	p.E829D	1.000	176	0%	159	37.7%	13	53.8%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMSmart_SM00498,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)
DIAPH3	81624	genome.wustl.edu	37	13	60545034	60545034	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042517.1	-1	validated	p.K637N	1.000	140	0%	120	45%	6	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00498,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)
TDRD3	81550	genome.wustl.edu	37	13	61102603	61102603	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030794.2	+1	validated	p.R322Q	1.000	92	0%	91	34.1%	1	100%	probably_damaging(0.998)	tolerated(0.19)	deleterious(0.524)	NULL
LOC390407	390407	genome.wustl.edu	37	13	61211967	61211967	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_078475.1	-1	model	NULL	1.000	34	0%	72	29.2%	0	-	-	-	-	-
PCDH20	64881	genome.wustl.edu	37	13	61985666	61985666	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022843.3	-1	validated	p.L856I	1.000	151	0%	120	31.7%	0	-	probably_damaging(0.99)	deleterious(0.02)	deleterious(0.825)	NULL
PCDH20	64881	genome.wustl.edu	37	13	61986483	61986483	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022843.3	-1	validated	p.S583	0.627	187	0%	221	35.3%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
PCDH20	64881	genome.wustl.edu	37	13	61987641	61987641	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022843.3	-1	validated	p.I197	0.999	71	0%	94	31.9%	1	0%	-	-	-	PatternScan_CADHERIN_1
PCDH9	5101	genome.wustl.edu	37	13	67799911	67799911	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203487.2	-1	reviewed	p.E888K	1.000	114	0%	117	29.1%	9	33.3%	probably_damaging(0.974)	tolerated(0.14)	deleterious(0.665)	HMMPfam_Protocadherin
PCDH9	5101	genome.wustl.edu	37	13	67800764	67800764	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203487.2	-1	reviewed	p.E603D	0.998	112	0%	115	35.7%	8	50%	benign(0.067)	tolerated(0.26)	neutral(0.038)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DIS3	22894	genome.wustl.edu	37	13	73343019	73343019	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014953.3	-1	validated	p.R596I	1.000	200	0%	245	31.8%	15	53.3%	benign(0.014)	tolerated(0.19)	neutral(0.050)	HMMPfam_RNB
TBC1D4	9882	genome.wustl.edu	37	13	75880452	75880452	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014832.2	-1	validated	p.E917*	1.000	150	0%	93	39.8%	4	0%	-	-	-	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p
TBC1D4	9882	genome.wustl.edu	37	13	75930289	75930289	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014832.2	-1	validated	p.E423D	0.998	84	0%	83	30.1%	1	0%	probably_damaging(0.997)	tolerated(0.05)	deleterious(0.811)	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like
TBC1D4	9882	genome.wustl.edu	37	13	75933987	75933987	+	Missense_Mutation	SNP	C	C	T	rs150208730		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014832.2	-1	validated	p.R363Q	1.000	144	0%	140	25.7%	0	-	probably_damaging(1)	tolerated(0.42)	deleterious(0.514)	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like
TBC1D4	9882	genome.wustl.edu	37	13	75936395	75936395	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014832.2	-1	validated	p.G283W	0.000	39	0%	48	33.3%	2	0%	benign(0.146)	deleterious(0.03)	neutral(0.377)	HMMPfam_PID,HMMSmart_SM00462,superfamily_PH domain-like
LMO7	4008	genome.wustl.edu	37	13	76378496	76378496	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015842.2	+1	reviewed	p.R12*	1.000	176	0%	194	32.5%	11	27.2%	-	-	-	NULL
MYCBP2	23077	genome.wustl.edu	37	13	77642872	77642872	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015057.4	-1	validated	p.S3962Y	1.000	325	0%	392	32.9%	7	14.2%	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	NULL
MYCBP2	23077	genome.wustl.edu	37	13	77754433	77754433	+	Silent	SNP	C	C	T	rs61753811		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015057.4	-1	validated	p.G1616	0.283	129	0%	120	32.5%	0	-	-	-	-	NULL
MYCBP2	23077	genome.wustl.edu	37	13	77834691	77834691	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015057.4	-1	validated	p.K592T	1.000	293	0%	232	38.4%	2	100%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	superfamily_RCC1/BLIP-II
SCEL	8796	genome.wustl.edu	37	13	78167696	78167696	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144777.2	+1	validated	p.R247I	0.991	345	0%	287	34.8%	0	-	possibly_damaging(0.667)	deleterious(0)	deleterious(0.680)	NULL
SCEL	8796	genome.wustl.edu	37	13	78202117	78202117	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144777.2	+1	validated	p.S555Y	0.927	91	0%	67	22.4%	2	100%	benign(0.004)	tolerated(0.18)	neutral(0.056)	NULL
POU4F1	5457	genome.wustl.edu	37	13	79175696	79175696	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006237.3	-1	validated	p.A372S	1.000	99	0%	100	38%	2	100%	probably_damaging(0.998)	tolerated(0.14)	deleterious(0.724)	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
RNF219	79596	genome.wustl.edu	37	13	79190282	79190282	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024546.3	-1	validated	p.I538	1.000	113	0%	149	33.6%	7	42.8%	-	-	-	NULL
RNF219	79596	genome.wustl.edu	37	13	79216295	79216295	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024546.3	-1	validated	p.R88W	1.000	319	0%	366	26.8%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SLITRK1	114798	genome.wustl.edu	37	13	84454061	84454061	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052910.1	-1	reviewed	p.G528R	1.000	68	0%	128	31.2%	0	-	benign(0.025)	deleterious(0.05)	neutral(0.346)	superfamily_SSF52058
SLITRK6	84189	genome.wustl.edu	37	13	86370523	86370523	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032229.2	-1	validated	p.D41Y	1.000	98	0%	59	37.3%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_L domain-like
SLITRK5	26050	genome.wustl.edu	37	13	88328362	88328362	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015567.1	+1	validated	p.S240Y	1.000	103	0%	124	20.2%	1	0%	probably_damaging(0.953)	deleterious(0)	deleterious(0.841)	HMMSmart_SM00082,superfamily_L domain-like
MIR622	693207	genome.wustl.edu	37	13	90883494	90883494	+	RNA	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000385123	+1	known	NULL	0.035	54	0%	129	34.9%	0	-	-	-	-	-
GPC5	2262	genome.wustl.edu	37	13	92345718	92345718	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004466.4	+1	reviewed	p.V201	0.257	115	0%	104	36.5%	0	-	-	-	-	HMMPfam_Glypican
SOX21	11166	genome.wustl.edu	37	13	95364217	95364217	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007084.2	-1	validated	p.E29D	1.000	74	0%	92	43.5%	12	83.3%	possibly_damaging(0.663)	tolerated(0.17)	neutral(0.293)	HMMPfam_HMG_box,HMMSmart_SM00398,superfamily_HMG-box
CLDN10	9071	genome.wustl.edu	37	13	96212691	96212691	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006984.4	+1	reviewed	p.F146L	1.000	388	0%	551	34.1%	65	33.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PMP22_Claudin
DNAJC3	5611	genome.wustl.edu	37	13	96409925	96409925	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006260.3	+1	reviewed	p.E141*	1.000	135	0%	133	29.3%	13	7.6%	-	-	-	superfamily_TPR-like
DNAJC3	5611	genome.wustl.edu	37	13	96439344	96439344	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006260.3	+1	reviewed	p.E431G	1.000	99	0%	147	38.8%	15	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_DnaJ,HMMSmart_SM00271,superfamily_Chaperone J-domain
UGGT2	55757	genome.wustl.edu	37	13	96622456	96622456	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020121.3	-1	validated	p.I415	0.003	169	0%	152	31.6%	1	0%	-	-	-	NULL
IPO5	3843	genome.wustl.edu	37	13	98637734	98637734	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000469360	+1	known	p.S79Y	0.998	129	0%	228	31.6%	25	60%	-	-	-	superfamily_ARM repeat
RNF113B	140432	genome.wustl.edu	37	13	98829149	98829149	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178861.4	-1	validated	p.F114	0.998	59	0%	52	30.8%	0	-	-	-	-	NULL
STK24	8428	genome.wustl.edu	37	13	99115965	99115965	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000444574	-1	known	p.E221K	0.997	156	0%	267	32.6%	60	70%	-	-	-	NULL
STK24	8428	genome.wustl.edu	37	13	99127564	99127564	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003576.3	-1	validated	p.E139*	1.000	232	0%	340	32.9%	42	2.3%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
STK24	8428	genome.wustl.edu	37	13	99171685	99171685	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003576.3	-1	validated	p.K41E	1.000	261	0%	391	37.6%	13	61.5%	benign(0.023)	tolerated(0.48)	neutral(0.011)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
DOCK9	23348	genome.wustl.edu	37	13	99505695	99505695	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000357329	-1	known	p.C1306R	1.000	213	0%	328	36.9%	3	100%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
GPR18	2841	genome.wustl.edu	37	13	99907377	99907377	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098200.1	-1	validated	p.I250	0.998	135	0%	210	31.4%	3	33.3%	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
TM9SF2	9375	genome.wustl.edu	37	13	100196132	100196132	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004800.1	+1	provisional	p.E345*	1.000	204	0%	250	31.2%	99	2%	-	-	-	HMMPfam_EMP70
CLYBL	171425	genome.wustl.edu	37	13	100515258	100515258	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000339105	+1	known	p.F151C	1.000	181	0%	182	28%	1	0%	benign(0.073)	tolerated(0.05)	neutral(0.350)	HMMPfam_HpcH_HpaI,superfamily_Phosphoenolpyruvate/pyruvate domain
NALCN	259232	genome.wustl.edu	37	13	101748006	101748006	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052867.2	-1	validated	p.I1063S	1.000	262	0%	135	40.7%	0	-	benign(0.097)	tolerated(0.17)	neutral(0.067)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
NALCN	259232	genome.wustl.edu	37	13	102030939	102030939	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052867.2	-1	validated	p.W119C	1.000	214	0%	277	35%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
TPP2	7174	genome.wustl.edu	37	13	103292684	103292684	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003291.2	+1	reviewed	p.R660*	1.000	324	0%	299	31.4%	5	20%	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103385293	103385293	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344085.1	-1	model	p.P5766	0.000	211	0%	191	32.5%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103386357	103386357	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344085.1	-1	model	p.L5412M	0.000	136	0%	80	26.3%	0	-	unknown(0)	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103388530	103388530	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344085.1	-1	model	p.F4687L	0.000	279	0%	204	30.9%	0	-	benign(0.014)	tolerated(0.31)	neutral(0.028)	NULL
LOC643677	643677	genome.wustl.edu	37	13	103390528	103390528	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344085.1	-1	model	p.D4102	0.000	570	0%	476	31.3%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103391292	103391292	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344085.1	-1	model	p.D3848Y	0.000	221	0%	114	32.5%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103391831	103391831	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344085.1	-1	model	p.R3668I	0.989	130	0%	56	28.6%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103392120	103392120	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344085.1	-1	model	p.I3572L	0.000	422	0%	216	26.9%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103393746	103393746	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344085.1	-1	model	p.E3030*	0.001	82	0%	45	24.4%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103395890	103395890	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344085.1	-1	model	p.I2315S	0.000	221	0%	101	36.6%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103396718	103396718	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344085.1	-1	model	p.S2039Y	0.000	125	0%	57	33.3%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103402412	103402412	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344085.1	-1	model	p.S141Y	0.989	160	0%	103	26.2%	0	-	-	-	-	NULL
LOC643677	643677	genome.wustl.edu	37	13	103411094	103411094	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344085.1	-1	model	p.K9N	0.144	72	0%	53	35.8%	0	-	-	-	-	NULL
TEX30	93081	genome.wustl.edu	37	13	103418763	103418763	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138779.3	-1	validated	p.K224N	1.000	227	0%	318	34.3%	23	47.8%	benign(0.102)	tolerated(0.24)	neutral(0.045)	NULL
KDELC1	79070	genome.wustl.edu	37	13	103443320	103443320	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024089.2	-1	reviewed	p.F338L	1.000	134	0%	176	29%	9	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_CAP10,HMMPfam_DUF821
BIVM	54841	genome.wustl.edu	37	13	103492015	103492015	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017693.3	+1	validated	p.E438*	1.000	107	0%	140	32.1%	5	60%	-	-	-	NULL
ERCC5	2073	genome.wustl.edu	37	13	103515050	103515050	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000123.2	+1	reviewed	p.P517	0.000	103	0%	123	32.5%	12	25%	-	-	-	superfamily_PIN domain-like
ERCC5	2073	genome.wustl.edu	37	13	103525642	103525642	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000123.2	+1	reviewed	p.T971	0.008	94	0%	167	32.9%	41	34.1%	-	-	-	superfamily_5' to 3' exonuclease C-terminal subdomain
SLC10A2	6555	genome.wustl.edu	37	13	103710651	103710651	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000452.2	-1	reviewed	p.V153	0.007	108	0%	118	30.5%	0	-	-	-	-	HMMPfam_SBF
SLC10A2	6555	genome.wustl.edu	37	13	103718340	103718340	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000452.2	-1	reviewed	p.S87L	1.000	142	0%	157	31.2%	0	-	benign(0.039)	deleterious(0.04)	neutral(0.351)	HMMPfam_SBF
DAOA	267012	genome.wustl.edu	37	13	106142414	106142414	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172370.3	+1	reviewed	p.S149Y	0.002	82	0%	74	24.3%	0	-	possibly_damaging(0.604)	deleterious(0)	deleterious(0.654)	NULL
LOC390424	390424	genome.wustl.edu	37	13	107315926	107315926	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344086.1	+1	model	p.R48W	0.917	149	0%	190	34.2%	0	-	-	-	-	NULL
LIG4	3981	genome.wustl.edu	37	13	108861953	108861953	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098268.1	-1	reviewed	p.V555G	1.000	194	0%	306	32%	2	50%	probably_damaging(0.991)	tolerated(0.31)	deleterious(0.471)	NULL
LIG4	3981	genome.wustl.edu	37	13	108863483	108863483	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098268.1	-1	reviewed	p.S45Y	1.000	108	0%	66	30.3%	4	25%	benign(0.26)	tolerated(0.21)	neutral(0.071)	HMMPfam_DNA_ligase_A_N
MYO16	23026	genome.wustl.edu	37	13	109318319	109318319	+	Silent	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015011.1	+1	validated	p.R16	0.978	77	0%	96	32.3%	0	-	-	-	-	NULL
MYO16	23026	genome.wustl.edu	37	13	109613904	109613904	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015011.1	+1	validated	p.F663L	1.000	212	0%	255	25.9%	0	-	possibly_damaging(0.775)	tolerated(0.13)	deleterious(0.541)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO16	23026	genome.wustl.edu	37	13	109617127	109617127	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015011.1	+1	validated	p.R727Q	0.408	273	0%	358	34.4%	0	-	probably_damaging(1)	tolerated(0.33)	deleterious(0.524)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO16	23026	genome.wustl.edu	37	13	109704685	109704685	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015011.1	+1	validated	p.S948	1.000	193	0%	170	23.5%	0	-	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO16	23026	genome.wustl.edu	37	13	109793721	109793721	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015011.1	+1	validated	p.E1699K	0.881	37	0%	35	25.7%	0	-	possibly_damaging(0.822)	deleterious(0.01)	deleterious(0.717)	NULL
COL4A1	1282	genome.wustl.edu	37	13	110828825	110828825	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001845.4	-1	reviewed	p.G1002C	1.000	167	0%	225	31.1%	87	3.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Collagen
COL4A2	1284	genome.wustl.edu	37	13	111009849	111009849	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001846.2	+1	reviewed	p.G44*	1.000	402	0%	663	12.2%	83	0%	-	-	-	NULL
COL4A2	1284	genome.wustl.edu	37	13	111160550	111160550	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001846.2	+1	reviewed	p.I1621	0.973	90	0%	80	31.2%	416	0.2%	-	-	-	HMMPfam_C4,HMMSmart_C4,superfamily_C-type_lectin_fold
ING1	3621	genome.wustl.edu	37	13	111372064	111372064	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005537.3	+1	reviewed	p.E352*	1.000	49	0%	85	37.6%	122	52.4%	-	-	-	superfamily_FYVE/PHD zinc finger
ARHGEF7	8874	genome.wustl.edu	37	13	111767943	111767943	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113511.1	+1	reviewed	p.I24V	1.000	13	0%	14	71.4%	0	-	benign(0.428)	tolerated(0.32)	neutral(0.163)	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
SPACA7	122258	genome.wustl.edu	37	13	113088848	113088848	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145248.3	+1	provisional	p.S191	0.000	106	0%	151	25.8%	0	-	-	-	-	NULL
ATP11A	23250	genome.wustl.edu	37	13	113512595	113512595	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032189.3	+1	reviewed	p.F886L	1.000	184	0%	201	34.3%	1	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Calcium ATPase transmembrane domain M
MCF2L	23263	genome.wustl.edu	37	13	113634065	113634065	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024979.3	+1	validated	p.S28	0.000	23	0%	22	36.4%	2	0%	-	-	-	NULL
F10	2159	genome.wustl.edu	37	13	113783828	113783828	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000504.3	+1	reviewed	p.L45I	0.000	89	1.1%	136	36.8%	0	-	benign(0.114)	deleterious(0.05)	neutral(0.354)	HMMPfam_Gla,HMMSmart_SM00069,superfamily_GLA-domain
LOC100289447	100289447	genome.wustl.edu	37	13	113803456	113803456	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344234.1	-1	model	p.E114K	0.997	23	4.3%	30	46.7%	1	0%	-	-	-	NULL
ADPRHL1	113622	genome.wustl.edu	37	13	114078645	114078645	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138430.3	-1	validated	p.S265L	0.999	74	0%	108	40.7%	4	25%	probably_damaging(0.999)	tolerated(0.31)	deleterious(0.517)	HMMPfam_ADP_ribosyl_GH,superfamily_ADP-ribosylglycohydrolase
TMCO3	55002	genome.wustl.edu	37	13	114150160	114150160	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017905.4	+1	validated	p.E88D	1.000	60	0%	172	35.5%	16	18.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TFDP1	7027	genome.wustl.edu	37	13	114287501	114287501	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007111.4	+1	reviewed	p.E125D	1.000	82	0%	145	35.2%	41	43.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_E2F_TDP,superfamily_SSF46785
TFDP1	7027	genome.wustl.edu	37	13	114294571	114294571	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007111.4	+1	reviewed	p.E408K	1.000	45	0%	77	33.8%	62	32.2%	unknown(0)	deleterious(0)	-	NULL
FAM70B	348013	genome.wustl.edu	37	13	114514716	114514716	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182614.2	+1	provisional	p.S274N	0.003	99	0%	90	31.1%	3	0%	benign(0.338)	tolerated(0.06)	neutral(0.429)	NULL
CDC16	8881	genome.wustl.edu	37	13	115004480	115004480	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001078645.1	+1	reviewed	p.R73C	1.000	318	0%	483	34.2%	20	20%	benign(0.056)	tolerated(0.19)	neutral(0.053)	superfamily_TPR-like
CDC16	8881	genome.wustl.edu	37	13	115037693	115037693	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001078645.1	+1	reviewed	p.D546	1.000	50	0%	67	35.8%	112	39.2%	-	-	-	NULL
LOC100132257	100132257	genome.wustl.edu	37	14	19114489	19114489	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343306.1	+1	model	p.T33A	0.996	81	0%	141	14.9%	0	-	-	-	-	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
OR11H12	440153	genome.wustl.edu	37	14	19378230	19378230	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013354.1	+1	provisional	p.F213L	0.001	538	0%	587	15%	0	-	benign(0)	tolerated(0.23)	neutral(0.042)	HMMPfam_7tm_1,superfamily_SSF81321
POTEG	404785	genome.wustl.edu	37	14	19553478	19553478	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005356.2	+1	validated	p.R21I	0.003	1000	0.1%	918	6.6%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
POTEG	404785	genome.wustl.edu	37	14	19553675	19553675	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005356.2	+1	validated	p.D87N	0.000	548	0%	635	10.9%	0	-	benign(0.006)	deleterious(0)	neutral(0.445)	NULL
ENSG00000226518	0	genome.wustl.edu	37	14	20087682	20087682	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000422907	+1	known	p.E84D	1.000	90	0%	132	22%	0	-	-	-	-	NULL
OR11H2	79334	genome.wustl.edu	37	14	20181611	20181611	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000334072	-1	known	p.L155	0.001	497	0%	628	14.5%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR11H2	79334	genome.wustl.edu	37	14	20181767	20181767	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000334072	-1	known	p.E103D	0.000	367	0%	462	13.6%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR11H2	79334	genome.wustl.edu	37	14	20181833	20181833	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000334072	-1	known	p.F81L	0.992	279	0%	332	24.4%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR4Q3	441669	genome.wustl.edu	37	14	20216153	20216153	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172194.1	+1	provisional	p.A189	0.997	537	0%	504	23.4%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR4Q3	441669	genome.wustl.edu	37	14	20216514	20216514	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172194.1	+1	provisional	p.P310T	0.000	128	0%	158	20.3%	0	-	benign(0.001)	deleterious(0.04)	neutral(0.349)	NULL
OR4M1	441670	genome.wustl.edu	37	14	20249377	20249377	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005500.1	+1	provisional	p.A299V	1.000	250	0%	315	25.4%	0	-	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	superfamily_Family A G protein-coupled receptor-like
OR4N2	390429	genome.wustl.edu	37	14	20295871	20295871	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004723.1	+1	provisional	p.A88	0.912	366	0%	507	21.3%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR4K2	390431	genome.wustl.edu	37	14	20344704	20344704	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005501.1	+1	provisional	p.S93Y	0.998	430	0%	570	20.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4K5	79317	genome.wustl.edu	37	14	20389043	20389043	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005483.1	+1	provisional	p.S93Y	0.727	322	0%	314	23.2%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_7tm_1,superfamily_SSF81321
OR4K5	79317	genome.wustl.edu	37	14	20389507	20389507	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005483.1	+1	provisional	p.I248L	0.000	599	0%	503	27.4%	0	-	benign(0)	tolerated(0.4)	neutral(0.016)	HMMPfam_7tm_1,superfamily_SSF81321
OR4K1	79544	genome.wustl.edu	37	14	20403974	20403974	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004063.2	+1	validated	p.S50Y	0.000	811	0%	896	19.5%	0	-	benign(0.009)	tolerated(0.08)	neutral(0.300)	HMMPfam_7tm_1,superfamily_SSF81321
OR4K1	79544	genome.wustl.edu	37	14	20404262	20404262	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004063.2	+1	validated	p.S146Y	0.000	325	0.3%	336	21.1%	0	-	benign(0.011)	tolerated(0.09)	neutral(0.297)	HMMPfam_7tm_1,superfamily_SSF81321
OR4K15	81127	genome.wustl.edu	37	14	20444383	20444383	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005486.1	+1	provisional	p.L236I	0.000	242	0%	183	28.4%	0	-	benign(0.155)	tolerated(0.5)	neutral(0.024)	HMMPfam_7tm_1,superfamily_SSF81321
OR4K13	390433	genome.wustl.edu	37	14	20502003	20502003	+	Nonstop_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004714.1	-1	provisional	p.*305Y	0.001	50	0%	40	25%	0	-	-	-	-	NULL
OR4L1	122742	genome.wustl.edu	37	14	20528974	20528974	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004717.1	+1	provisional	p.I257	0.814	263	0%	180	35%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR4N5	390437	genome.wustl.edu	37	14	20612213	20612213	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004724.1	+1	provisional	p.L107I	0.009	199	0%	209	32.1%	0	-	benign(0.012)	tolerated(0.17)	neutral(0.059)	HMMPfam_7tm_1,superfamily_SSF81321
OR11G2	390439	genome.wustl.edu	37	14	20666238	20666238	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005503.1	+1	provisional	p.L248	0.001	256	0.4%	386	31.9%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR11H6	122748	genome.wustl.edu	37	14	20692037	20692037	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004480.1	+1	provisional	p.L57M	0.179	187	0%	246	32.9%	0	-	benign(0.325)	deleterious(0)	deleterious(0.546)	superfamily_SSF81321
OR11H4	390442	genome.wustl.edu	37	14	20711176	20711176	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004479.1	+1	provisional	p.F76V	0.874	104	0%	216	35.2%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
TEP1	7011	genome.wustl.edu	37	14	20856156	20856156	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007110.4	-1	reviewed	p.K864N	1.000	142	0.7%	259	57.9%	3	100%	probably_damaging(0.999)	tolerated(0.13)	deleterious(0.743)	NULL
KLHL33	123103	genome.wustl.edu	37	14	20897488	20897488	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001109997.2	-1	validated	p.S294	0.795	138	0%	263	33.5%	0	-	-	-	-	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central
KLHL33	123103	genome.wustl.edu	37	14	20898098	20898098	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001109997.2	-1	validated	p.R166Q	0.082	55	0%	57	42.1%	1	0%	probably_damaging(0.988)	deleterious(0.04)	deleterious(0.786)	superfamily_Gal_oxid_central
RNASE11	122651	genome.wustl.edu	37	14	21052295	21052295	+	Silent	SNP	C	C	T	rs141129644	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145250.3	-1	validated	p.S113	0.000	159	1.3%	261	34.1%	0	-	-	-	-	superfamily_RNase A-like
OR6S1	341799	genome.wustl.edu	37	14	21109613	21109613	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001968.1	-1	provisional	p.I80V	1.000	102	0%	165	32.7%	0	-	benign(0.002)	tolerated(0.5)	neutral(0.010)	HMMPfam_7tm_1,superfamily_SSF81321
EDDM3A	10876	genome.wustl.edu	37	14	21216143	21216143	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006683.4	+1	validated	p.N135T	0.212	57	0%	103	34%	0	-	benign(0.01)	tolerated(0.13)	neutral(0.253)	superfamily_RNaseA
EDDM3B	64184	genome.wustl.edu	37	14	21238327	21238327	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022360.4	+1	validated	p.K6N	0.000	56	0%	83	37.3%	0	-	probably_damaging(0.958)	deleterious(0)	deleterious(0.846)	NULL
ENSG00000136315	0	genome.wustl.edu	37	14	21388182	21388182	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000258817	+1	known	p.A128T	0.000	105	0%	149	28.2%	1	0%	-	-	-	HMMPfam_RnaseA,HMMSmart_SM00092,superfamily_RNase A-like
ENSG00000246096	0	genome.wustl.edu	37	14	21464013	21464013	+	RNA	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000500338	-1	known	NULL	0.001	222	0%	279	38.4%	0	-	-	-	-	-
RNASE7	84659	genome.wustl.edu	37	14	21511502	21511502	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032572.3	+1	validated	p.P117	0.003	138	0%	206	35.9%	0	-	-	-	-	HMMPfam_RnaseA,HMMSmart_SM00092,superfamily_RNase A-like
RPGRIP1	57096	genome.wustl.edu	37	14	21771501	21771501	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020366.3	+1	reviewed	p.S200F	0.223	52	0%	92	34.8%	0	-	possibly_damaging(0.933)	tolerated(0.09)	deleterious(0.675)	NULL
RPGRIP1	57096	genome.wustl.edu	37	14	21780645	21780645	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020366.3	+1	reviewed	p.N377K	1.000	114	0%	255	35.7%	0	-	benign(0.141)	deleterious(0.02)	neutral(0.395)	NULL
CHD8	57680	genome.wustl.edu	37	14	21869147	21869147	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020920.3	-1	reviewed	p.F1140L	1.000	251	0.4%	426	32.6%	10	60%	benign(0)	tolerated(0.83)	neutral(0.001)	superfamily_P-loop containing nucleoside triphosphate hydrolases
CHD8	57680	genome.wustl.edu	37	14	21873897	21873897	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020920.3	-1	reviewed	p.L733I	1.000	133	0%	210	32.4%	9	66.6%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_SNF2_N
CHD8	57680	genome.wustl.edu	37	14	21882504	21882504	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020920.3	-1	reviewed	p.R421C	1.000	339	0%	527	30%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Chromo,HMMSmart_SM00298,superfamily_Chromo domain-like
TOX4	9878	genome.wustl.edu	37	14	21944860	21944860	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000416256	+1	known	p.R16Q	0.546	12	0%	15	40%	0	-	unknown(0)	-	-	NULL
OR4E2	26686	genome.wustl.edu	37	14	22133461	22133461	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001912.1	+1	validated	p.L55	0.922	336	0%	475	33.3%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
ABHD4	63874	genome.wustl.edu	37	14	23072380	23072380	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022060.2	+1	validated	p.N66	0.990	51	0%	75	38.7%	19	36.8%	-	-	-	superfamily_SSF53474
SLC7A7	9056	genome.wustl.edu	37	14	23244666	23244666	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001126105.1	-1	reviewed	p.S361Y	1.000	85	0%	172	38.4%	12	16.6%	benign(0.204)	deleterious(0)	neutral(0.464)	NULL
REM2	161253	genome.wustl.edu	37	14	23354010	23354010	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173527.2	+1	validated	p.L77	1.000	52	0%	77	41.6%	0	-	-	-	-	NULL
HAUS4	54930	genome.wustl.edu	37	14	23416390	23416390	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017815.2	-1	reviewed	p.R300C	1.000	72	0%	188	42%	34	20.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PSMB11	122706	genome.wustl.edu	37	14	23512056	23512056	+	Missense_Mutation	SNP	G	G	A	rs144901834	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099780.1	+1	validated	p.A208T	0.998	46	0%	69	39.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Proteasome,superfamily_SSF56235
SLC22A17	51310	genome.wustl.edu	37	14	23818557	23818557	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020372.2	-1	provisional	p.S150	0.995	58	0%	80	36.2%	11	0%	-	-	-	HMMPfam_MFS_1,superfamily_MFS general substrate transporter
MYH6	4624	genome.wustl.edu	37	14	23863307	23863307	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002471.3	-1	validated	p.E885	1.000	143	0%	171	39.8%	0	-	-	-	-	NULL
LOC100288922	100288922	genome.wustl.edu	37	14	23885021	23885021	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343268.1	+1	model	p.V60I	0.995	99	0%	128	32%	0	-	-	-	-	NULL
MYH7	4625	genome.wustl.edu	37	14	23886765	23886765	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000257.2	-1	reviewed	p.R1434C	1.000	139	0%	157	29.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_tail_1,superfamily_Prefoldin
MYH7	4625	genome.wustl.edu	37	14	23894508	23894508	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000257.2	-1	reviewed	p.K802N	1.000	121	0%	224	35.7%	0	-	benign(0)	tolerated(0.16)	neutral(0.059)	HMMPfam_IQ,HMMSmart_SM00015,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYH7	4625	genome.wustl.edu	37	14	23900644	23900644	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000257.2	-1	reviewed	p.S260Y	0.998	155	0%	243	31.3%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYH7	4625	genome.wustl.edu	37	14	23901694	23901694	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000257.2	-1	reviewed	p.L175R	1.000	345	0.3%	483	37.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
NGDN	25983	genome.wustl.edu	37	14	23940183	23940183	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042635.1	+1	validated	p.E47D	1.000	147	0%	337	32%	34	44.1%	benign(0)	tolerated(0.62)	neutral(0.004)	HMMPfam_Sas10_Utp3
AP1G2	8906	genome.wustl.edu	37	14	24029197	24029197	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003917.2	-1	reviewed	p.R736W	1.000	52	0%	75	33.3%	48	58.3%	possibly_damaging(0.851)	deleterious(0.02)	deleterious(0.710)	HMMPfam_Alpha_adaptinC2,HMMSmart_Alpha_adaptinC2,superfamily_Clath_adapt
DHRS4L1	728635	genome.wustl.edu	37	14	24518539	24518539	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001082488.1	+1	provisional	p.R241W	0.000	251	0.4%	549	37%	2	0%	benign(0.012)	tolerated(0.09)	neutral(0.297)	superfamily_NAD(P)-binding Rossmann-fold domains
LRRC16B	90668	genome.wustl.edu	37	14	24529234	24529234	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138360.3	+1	validated	p.R642C	1.000	106	0%	138	35.5%	0	-	unknown(0)	deleterious(0)	-	NULL
PCK2	5106	genome.wustl.edu	37	14	24566230	24566230	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004563.2	+1	reviewed	p.R53	0.968	52	0%	75	36%	29	31%	-	-	-	HMMPfam_PEPCK,superfamily_PEP carboxykinase N-terminal domain
PSME2	5721	genome.wustl.edu	37	14	24614371	24614371	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000429021	-1	known	p.L101F	0.982	291	0%	691	35.2%	1	0%	-	-	-	superfamily_Proteasome activator reg(alpha)
PSME2	5721	genome.wustl.edu	37	14	24614962	24614962	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002818.2	-1	reviewed	p.R34I	0.157	163	0%	357	28.6%	155	35.4%	benign(0.007)	tolerated(0.05)	neutral(0.345)	HMMPfam_PA28_alpha,superfamily_Prot_act_regA
RNF31	55072	genome.wustl.edu	37	14	24624626	24624626	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017999.4	+1	validated	p.R770C	1.000	147	0%	210	39%	40	30%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
IPO4	79711	genome.wustl.edu	37	14	24655131	24655131	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024658.3	-1	validated	p.R369C	1.000	58	0%	90	28.9%	56	51.7%	unknown(0)	tolerated(0.08)	-	HMMPfam_HEAT,superfamily_ARM repeat
RABGGTA	5875	genome.wustl.edu	37	14	24738118	24738118	+	Nonsense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004581.3	-1	validated	p.L266*	0.001	95	0%	187	29.4%	24	16.6%	-	-	-	HMMPfam_RabGGT_insert,superfamily_RabGG_trans_A,superfamily_Prenyl_trans
ADCY4	196883	genome.wustl.edu	37	14	24787668	24787668	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139247.2	-1	reviewed	p.N1063S	1.000	270	0%	443	32.7%	7	0%	benign(0)	tolerated(0.3)	neutral(0.029)	HMMPfam_Guanylate_cyc,superfamily_Adenylyl and guanylyl cyclase catalytic domain
NYNRIN	57523	genome.wustl.edu	37	14	24886097	24886097	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025081.2	+1	validated	p.T1714	0.001	21	0%	36	36.1%	22	50%	-	-	-	NULL
KHNYN	23351	genome.wustl.edu	37	14	24902032	24902032	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015299.2	+1	validated	p.R485H	1.000	240	0%	358	32.4%	40	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
KHNYN	23351	genome.wustl.edu	37	14	24905333	24905333	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015299.2	+1	validated	p.F545L	1.000	112	0%	176	25%	27	44.4%	benign(0.107)	tolerated(0.18)	neutral(0.065)	NULL
GZMB	3002	genome.wustl.edu	37	14	25102155	25102155	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004131.4	-1	reviewed	p.D57N	0.000	122	0%	177	40.7%	6	0%	possibly_damaging(0.445)	tolerated(0.36)	neutral(0.165)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
FOXG1	2290	genome.wustl.edu	37	14	29237185	29237185	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005249.3	+1	reviewed	p.S234P	1.000	33	0%	38	50%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Fork_head,HMMSmart_FH,superfamily_SSF46785
G2E3	55632	genome.wustl.edu	37	14	31085723	31085723	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017769.3	+1	validated	p.H702N	0.992	72	0%	85	24.7%	2	50%	benign(0.004)	deleterious(0)	neutral(0.445)	NULL
COCH	1690	genome.wustl.edu	37	14	31349942	31349942	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135058.1	+1	reviewed	e7+2	1.000	120	0%	177	35.6%	0	-	-	-	-	-
COCH	1690	genome.wustl.edu	37	14	31358960	31358960	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135058.1	+1	reviewed	p.R539K	1.000	168	0%	208	36.5%	10	90%	probably_damaging(0.99)	tolerated(0.8)	neutral(0.442)	superfamily_vWA-like
STRN3	29966	genome.wustl.edu	37	14	31364942	31364942	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001083893.1	-1	validated	p.H717R	1.000	111	0%	132	31.1%	18	44.4%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
HECTD1	25831	genome.wustl.edu	37	14	31618223	31618223	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015382.2	-1	validated	p.E767*	1.000	250	0%	405	35.6%	3	0%	-	-	-	superfamily_ARM repeat
ARHGAP5	394	genome.wustl.edu	37	14	32560511	32560511	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001030055.1	+1	reviewed	p.V212	0.998	109	0%	85	35.3%	4	25%	-	-	-	HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
ARHGAP5	394	genome.wustl.edu	37	14	32562651	32562651	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001030055.1	+1	reviewed	p.R926W	0.996	143	0.7%	134	32.1%	1	0%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
AKAP6	9472	genome.wustl.edu	37	14	33015749	33015749	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004274.4	+1	reviewed	p.Y630*	1.000	115	0%	170	30.6%	0	-	-	-	-	NULL
AKAP6	9472	genome.wustl.edu	37	14	33291974	33291974	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004274.4	+1	reviewed	p.R1652Q	1.000	99	0%	87	34.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
AKAP6	9472	genome.wustl.edu	37	14	33292160	33292160	+	Missense_Mutation	SNP	C	C	T	rs143719716	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004274.4	+1	reviewed	p.S1714L	0.996	142	0%	141	9.9%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
AKAP6	9472	genome.wustl.edu	37	14	33292416	33292416	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004274.4	+1	reviewed	p.K1799N	1.000	113	0%	150	34%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NPAS3	64067	genome.wustl.edu	37	14	34269154	34269154	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173159.2	+1	reviewed	p.F534	1.000	67	0%	68	29.4%	0	-	-	-	-	NULL
EGLN3	112399	genome.wustl.edu	37	14	34398307	34398307	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022073.3	-1	validated	p.E197K	1.000	119	0%	156	37.2%	29	31%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_2OG-FeII_Oxy,HMMSmart_P4Hc
EAPP	55837	genome.wustl.edu	37	14	34985778	34985778	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018453.3	-1	reviewed	p.K199I	1.000	79	0%	175	32.6%	32	43.7%	probably_damaging(0.972)	tolerated(0.11)	deleterious(0.685)	HMMPfam_Eapp_C
SNX6	58533	genome.wustl.edu	37	14	35072589	35072589	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152233.2	-1	reviewed	p.L173	1.000	64	0%	123	30.1%	19	31.5%	-	-	-	HMMPfam_PX,superfamily_PX domain
BAZ1A	11177	genome.wustl.edu	37	14	35245691	35245691	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013448.2	-1	validated	p.F756C	0.991	107	0%	189	44.4%	1	100%	benign(0.001)	tolerated(0.2)	neutral(0.049)	NULL
BAZ1A	11177	genome.wustl.edu	37	14	35280181	35280181	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013448.2	-1	validated	p.E200*	1.000	302	0%	435	26.7%	3	0%	-	-	-	NULL
SRP54	6729	genome.wustl.edu	37	14	35468834	35468834	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003136.3	+1	validated	p.K50T	1.000	175	0%	335	33.7%	12	91.6%	possibly_damaging(0.617)	tolerated(0.15)	neutral(0.456)	HMMPfam_SRP54_N,superfamily_Domain of the SRP/SRP receptor G-proteins
LOC100289251	100289251	genome.wustl.edu	37	14	35872871	35872871	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343271.1	+1	model	p.R75	0.013	60	0%	95	34.7%	0	-	-	-	-	NULL
RALGAPA1	253959	genome.wustl.edu	37	14	36143738	36143738	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194301.2	-1	provisional	p.W1095L	1.000	57	0%	74	35.1%	4	25%	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	NULL
RALGAPA1	253959	genome.wustl.edu	37	14	36217796	36217796	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194301.2	-1	provisional	p.R416S	1.000	117	0%	138	30.4%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RALGAPA1	253959	genome.wustl.edu	37	14	36230079	36230079	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194301.2	-1	provisional	p.R168Q	1.000	174	0%	235	30.2%	1	100%	probably_damaging(1)	tolerated(0.62)	deleterious(0.504)	NULL
MIPOL1	145282	genome.wustl.edu	37	14	37739656	37739656	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138731.5	+1	validated	p.E140G	1.000	102	0%	113	30.1%	1	0%	unknown(0)	deleterious(0)	-	NULL
TRAPPC6B	122553	genome.wustl.edu	37	14	39627545	39627545	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079537.1	-1	validated	p.D71Y	1.000	218	0%	306	33.7%	8	12.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TRAPP
PNN	5411	genome.wustl.edu	37	14	39648320	39648320	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002687.3	+1	validated	p.Q175P	1.000	168	0%	391	35.3%	40	50%	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	HMMPfam_Pinin_SDK_memA
MIA2	117153	genome.wustl.edu	37	14	39716340	39716340	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_054024.3	+1	validated	p.G188R	0.000	86	0%	170	31.2%	0	-	benign(0)	tolerated(0.89)	-	NULL
MIA2	117153	genome.wustl.edu	37	14	39722059	39722059	+	Missense_Mutation	SNP	G	G	A	rs146422472	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_054024.3	+1	validated	p.E559K	0.037	160	0%	191	34.6%	0	-	benign(0.002)	deleterious(0)	neutral(0.445)	NULL
CTAGE5	4253	genome.wustl.edu	37	14	39764189	39764189	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005930.3	+1	validated	p.D210Y	1.000	115	0%	179	24%	12	50%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
LRFN5	145581	genome.wustl.edu	37	14	42361143	42361143	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152447.3	+1	validated	p.S692	0.980	72	0%	97	38.1%	3	66.6%	-	-	-	NULL
FSCB	84075	genome.wustl.edu	37	14	44973891	44973891	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032135.3	-1	validated	p.G767E	0.000	54	0%	51	31.4%	0	-	probably_damaging(1)	tolerated(0.36)	deleterious(0.520)	NULL
FSCB	84075	genome.wustl.edu	37	14	44975122	44975122	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032135.3	-1	validated	p.E357K	0.008	89	0%	149	36.9%	0	-	possibly_damaging(0.749)	tolerated(0.38)	neutral(0.293)	NULL
KLHL28	54813	genome.wustl.edu	37	14	45403502	45403502	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017658.3	-1	validated	p.E387*	1.000	238	0%	269	33.8%	3	0%	-	-	-	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
FAM179B	23116	genome.wustl.edu	37	14	45465046	45465046	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015091.2	+1	validated	p.R715I	1.000	251	0%	362	33.1%	0	-	possibly_damaging(0.827)	deleterious(0)	deleterious(0.758)	superfamily_ARM repeat
FAM179B	23116	genome.wustl.edu	37	14	45535884	45535884	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015091.2	+1	validated	p.D1502Y	1.000	167	0%	214	34.6%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM repeat
FAM179B	23116	genome.wustl.edu	37	14	45542738	45542738	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015091.2	+1	validated	p.D1713N	0.870	102	0%	161	32.9%	7	14.2%	benign(0.013)	tolerated(0.13)	neutral(0.253)	NULL
FANCM	57697	genome.wustl.edu	37	14	45636235	45636235	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020937.2	+1	reviewed	p.R624I	0.994	106	0%	136	30.9%	0	-	benign(0.002)	tolerated(0.18)	neutral(0.056)	superfamily_P-loop containing nucleoside triphosphate hydrolases
FANCM	57697	genome.wustl.edu	37	14	45644492	45644492	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020937.2	+1	reviewed	p.I845	0.003	73	0%	76	28.9%	0	-	-	-	-	NULL
FANCM	57697	genome.wustl.edu	37	14	45644846	45644846	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020937.2	+1	reviewed	p.F963	0.976	54	0%	74	29.7%	0	-	-	-	-	NULL
MIS18BP1	55320	genome.wustl.edu	37	14	45673642	45673642	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018353.4	-1	validated	p.F1085L	0.182	183	0%	231	31.2%	19	52.6%	benign(0)	tolerated(0.63)	neutral(0.004)	NULL
RPL10L	140801	genome.wustl.edu	37	14	47120530	47120530	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080746.2	-1	reviewed	p.S137F	1.000	135	0%	164	33.5%	0	-	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_Ribosomal_L16,superfamily_Ribosomal_L10e/L16
MDGA2	161357	genome.wustl.edu	37	14	47351279	47351279	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113498.1	-1	validated	p.G726V	1.000	127	0%	77	31.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_FN_III-like
NEMF	9147	genome.wustl.edu	37	14	50251415	50251415	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004713.3	-1	validated	p.R1057I	1.000	135	0%	139	33.1%	20	35%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
NEMF	9147	genome.wustl.edu	37	14	50296111	50296111	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004713.3	-1	validated	p.R327*	1.000	234	0%	528	28.4%	1	0%	-	-	-	NULL
SOS2	6655	genome.wustl.edu	37	14	50585495	50585495	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006939.2	-1	validated	p.V1189A	1.000	26	0%	67	34.3%	9	44.4%	benign(0.003)	tolerated(0.61)	neutral(0.004)	NULL
SOS2	6655	genome.wustl.edu	37	14	50649319	50649319	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006939.2	-1	validated	p.I240	1.000	69	0%	94	33%	3	0%	-	-	-	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain
SOS2	6655	genome.wustl.edu	37	14	50655256	50655256	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006939.2	-1	validated	p.R225*	1.000	108	0%	135	34.1%	4	50%	-	-	-	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain
L2HGDH	79944	genome.wustl.edu	37	14	50713819	50713819	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024884.2	-1	reviewed	p.S450F	1.000	62	0%	86	31.4%	5	60%	probably_damaging(0.961)	deleterious(0)	deleterious(0.849)	HMMPfam_DAO
L2HGDH	79944	genome.wustl.edu	37	14	50736035	50736035	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024884.2	-1	reviewed	p.R251Q	0.869	70	0%	103	43.7%	8	62.5%	benign(0.014)	tolerated(0.39)	neutral(0.017)	HMMPfam_DAO,superfamily_FAD/NAD(P)-binding domain
ATL1	51062	genome.wustl.edu	37	14	51080016	51080016	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015915.4	+1	reviewed	p.E224K	1.000	291	0.3%	175	32%	1	0%	probably_damaging(0.964)	deleterious(0)	deleterious(0.851)	HMMPfam_GBP,superfamily_P-loop containing nucleoside triphosphate hydrolases
SAV1	60485	genome.wustl.edu	37	14	51131996	51131996	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021818.2	-1	reviewed	p.R146W	0.994	145	0%	216	29.6%	11	36.3%	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	NULL
NIN	51199	genome.wustl.edu	37	14	51210967	51210967	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020921.3	-1	reviewed	p.V1727	0.003	388	0%	518	30.7%	11	27.2%	-	-	-	NULL
NIN	51199	genome.wustl.edu	37	14	51223600	51223600	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020921.3	-1	reviewed	p.V1383G	0.000	163	0%	325	35.7%	1	100%	benign(0)	deleterious(0)	neutral(0.445)	NULL
PYGL	5836	genome.wustl.edu	37	14	51381530	51381530	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002863.4	-1	reviewed	p.F469L	1.000	210	0%	303	38.3%	7	42.8%	possibly_damaging(0.535)	tolerated(0.27)	neutral(0.214)	HMMPfam_Phosphorylase,superfamily_SSF53756
TRIM9	114088	genome.wustl.edu	37	14	51561083	51561083	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015163.5	-1	reviewed	p.P192L	1.000	33	0%	51	47.1%	0	-	benign(0.085)	tolerated(0.2)	neutral(0.055)	HMMSmart_SM00336
C14orf166	51637	genome.wustl.edu	37	14	52471088	52471088	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016039.2	+1	validated	p.L197I	1.000	165	0%	132	38.6%	293	49.8%	benign(0.001)	-	-	HMMPfam_RLL
NID2	22795	genome.wustl.edu	37	14	52481150	52481150	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007361.3	-1	validated	p.M1092T	0.006	163	0%	285	30.9%	12	0%	benign(0)	tolerated(1)	-	NULL
NID2	22795	genome.wustl.edu	37	14	52505500	52505500	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007361.3	-1	validated	p.R741I	0.281	238	0%	398	11.1%	8	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00682,superfamily_GFP-like
PTGER2	5732	genome.wustl.edu	37	14	52781362	52781362	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000956.3	+1	reviewed	p.F32L	0.969	20	0%	12	50%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	superfamily_SSF81321
PTGER2	5732	genome.wustl.edu	37	14	52781762	52781762	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000956.3	+1	reviewed	p.L166F	0.999	34	0%	38	28.9%	3	0%	benign(0.108)	tolerated(0.13)	neutral(0.261)	HMMPfam_7tm_1,superfamily_SSF81321
TXNDC16	57544	genome.wustl.edu	37	14	53010174	53010174	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020784.2	-1	validated	p.Q34H	0.976	113	0%	117	29.1%	1	0%	benign(0)	deleterious(0)	neutral(0.445)	superfamily_Thioredoxin-like
GPR137C	283554	genome.wustl.edu	37	14	53098897	53098897	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099652.1	+1	provisional	p.T246N	0.999	247	0%	281	31.3%	0	-	probably_damaging(0.962)	deleterious(0.02)	deleterious(0.788)	NULL
ERO1L	30001	genome.wustl.edu	37	14	53133162	53133162	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014584.1	-1	provisional	p.R187H	1.000	145	0%	254	34.6%	33	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ERO1,superfamily_ERO1
ERO1L	30001	genome.wustl.edu	37	14	53150576	53150576	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014584.1	-1	provisional	p.R55I	0.959	121	0%	161	21.7%	15	13.3%	possibly_damaging(0.531)	tolerated(0.39)	neutral(0.195)	superfamily_ERO1
CGRRF1	10668	genome.wustl.edu	37	14	54989231	54989231	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006568.2	+1	validated	p.R55I	1.000	207	0%	302	31.1%	10	30%	benign(0.111)	tolerated(0.34)	neutral(0.032)	NULL
CGRRF1	10668	genome.wustl.edu	37	14	54997737	54997737	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006568.2	+1	validated	p.A180V	1.000	118	0%	126	29.4%	9	44.4%	probably_damaging(0.956)	tolerated(0.22)	neutral(0.442)	NULL
SOCS4	122809	genome.wustl.edu	37	14	55510977	55510977	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080867.2	+1	reviewed	p.I406	0.979	149	0%	210	33.8%	6	50%	-	-	-	HMMPfam_SOCS_box,HMMSmart_SM00253,superfamily_SH2 domain
LGALS3	3958	genome.wustl.edu	37	14	55604621	55604621	+	RNA	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_003225.2	+1	reviewed	NULL	0.000	8	0.000	16	0.312	2	50%	-	-	-	-
DLGAP5	9787	genome.wustl.edu	37	14	55618421	55618421	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014750.4	-1	validated	p.S787Y	0.111	122	0%	113	31.9%	28	57.1%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
KTN1	3895	genome.wustl.edu	37	14	56079018	56079018	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079521.1	+1	validated	p.F84	0.996	62	0%	75	30.7%	14	42.8%	-	-	-	NULL
KTN1	3895	genome.wustl.edu	37	14	56139398	56139398	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079521.1	+1	validated	p.S1194	0.944	287	0%	206	29.6%	137	37.2%	-	-	-	NULL
PELI2	57161	genome.wustl.edu	37	14	56757152	56757152	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021255.2	+1	validated	p.S225L	1.000	106	0%	105	36.2%	3	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Pellino
C14orf101	54916	genome.wustl.edu	37	14	57088288	57088288	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017799.3	+1	validated	p.F422	1.000	187	0.5%	342	35.7%	7	71.4%	-	-	-	NULL
EXOC5	10640	genome.wustl.edu	37	14	57676477	57676477	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006544.3	-1	reviewed	p.Y582	0.998	197	0.5%	169	29%	9	33.3%	-	-	-	HMMPfam_Sec10
EXOC5	10640	genome.wustl.edu	37	14	57698260	57698260	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006544.3	-1	reviewed	p.S371L	1.000	126	0%	143	25.2%	6	33.3%	probably_damaging(0.982)	deleterious(0.01)	deleterious(0.832)	HMMPfam_Sec10
MUDENG	55745	genome.wustl.edu	37	14	57741091	57741091	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018229.3	+1	validated	p.F68	0.018	150	0%	184	34.2%	14	50%	-	-	-	NULL
NAA30	122830	genome.wustl.edu	37	14	57858409	57858409	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001011713.2	+1	validated	p.R245I	1.000	55	0%	60	35%	10	50%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	superfamily_Acyl-CoA N-acyltransferases (Nat)
SLC35F4	341880	genome.wustl.edu	37	14	58055985	58055985	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080455.1	-1	provisional	p.S215F	1.000	201	0%	228	34.2%	0	-	benign(0.209)	tolerated(0.26)	neutral(0.055)	NULL
C14orf37	145407	genome.wustl.edu	37	14	58605557	58605557	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001872.2	-1	predicted	p.E174K	0.003	73	0%	122	29.5%	4	50%	benign(0.425)	tolerated(0.36)	neutral(0.158)	NULL
KIAA0586	9786	genome.wustl.edu	37	14	58927786	58927786	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014749.3	+1	validated	p.R580Q	1.000	185	0%	259	31.3%	1	0%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
KIAA0586	9786	genome.wustl.edu	37	14	58975383	58975383	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014749.3	+1	validated	p.E1351*	0.013	250	0%	264	25.4%	10	10%	-	-	-	NULL
DAAM1	23002	genome.wustl.edu	37	14	59730251	59730251	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014992.1	+1	reviewed	p.R19Q	0.998	208	0%	232	33.6%	1	100%	unknown(0)	tolerated(0.43)	-	NULL
GPR135	64582	genome.wustl.edu	37	14	59930654	59930654	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022571.5	-1	validated	p.R431*	0.883	53	0%	69	29%	0	-	-	-	-	NULL
C14orf38	729665	genome.wustl.edu	37	14	59998597	59998597	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000281581	-1	known	p.K552T	0.005	326	0%	355	33.5%	0	-	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	NULL
C14orf38	729665	genome.wustl.edu	37	14	60005442	60005442	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000281581	-1	known	p.R491Q	0.002	370	0.3%	420	28.6%	0	-	probably_damaging(1)	tolerated(0.2)	deleterious(0.549)	NULL
C14orf38	729665	genome.wustl.edu	37	14	60030495	60030495	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000281581	-1	known	p.K268T	0.001	292	0.3%	219	29.7%	0	-	benign(0.046)	tolerated(0.32)	neutral(0.026)	NULL
RTN1	6252	genome.wustl.edu	37	14	60213158	60213158	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021136.2	-1	reviewed	p.T95A	0.000	41	0%	22	36.4%	0	-	benign(0)	tolerated(0.12)	neutral(0.261)	NULL
C14orf135	64430	genome.wustl.edu	37	14	60600862	60600862	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022495.5	+1	validated	p.L914I	1.000	179	0.6%	223	34.5%	28	35.7%	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	HMMPfam_Pecanex_C
C14orf39	317761	genome.wustl.edu	37	14	60923795	60923795	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174978.2	-1	validated	p.F400V	0.134	96	1%	43	39.5%	0	-	benign(0.119)	deleterious(0.01)	neutral(0.415)	NULL
SIX6	4990	genome.wustl.edu	37	14	60976364	60976364	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007374.2	+1	reviewed	p.S83L	1.000	67	0%	76	31.6%	0	-	possibly_damaging(0.943)	tolerated(0.33)	neutral(0.412)	NULL
SIX1	6495	genome.wustl.edu	37	14	61115663	61115663	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005982.3	-1	reviewed	p.K82R	1.000	71	0%	86	37.2%	2	100%	benign(0.205)	tolerated(0.06)	neutral(0.343)	NULL
TRMT5	57570	genome.wustl.edu	37	14	61446375	61446375	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020810.2	-1	validated	p.G81S	1.000	282	0%	352	28.7%	3	0%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
SLC38A6	145389	genome.wustl.edu	37	14	61510188	61510188	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153811.2	+1	validated	p.D237E	0.991	128	0%	136	27.9%	7	28.5%	benign(0.01)	tolerated(0.87)	neutral(0.001)	HMMPfam_Aa_trans
PRKCH	5583	genome.wustl.edu	37	14	61952307	61952307	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006255.3	+1	reviewed	p.A456T	0.993	267	0%	434	34.3%	10	20%	possibly_damaging(0.518)	tolerated(0.07)	deleterious(0.493)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
PRKCH	5583	genome.wustl.edu	37	14	61995853	61995853	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006255.3	+1	reviewed	p.F498	0.005	109	0%	195	33.3%	21	38%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SYT16	83851	genome.wustl.edu	37	14	62462834	62462834	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031914.2	+1	validated	p.D33Y	0.746	142	0%	108	29.6%	0	-	benign(0.046)	deleterious(0)	neutral(0.447)	NULL
GPHB5	122876	genome.wustl.edu	37	14	63779831	63779831	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145171.2	-1	validated	e2-1	1.000	187	0%	264	32.6%	0	-	-	-	-	-
SGPP1	81537	genome.wustl.edu	37	14	64152902	64152902	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030791.2	-1	provisional	p.R416P	1.000	111	0%	218	37.2%	8	62.5%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
SYNE2	23224	genome.wustl.edu	37	14	64375894	64375894	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182914.2	+1	reviewed	p.E10K	0.903	119	0%	201	35.3%	0	-	probably_damaging(0.955)	-	-	NULL
SYNE2	23224	genome.wustl.edu	37	14	64421478	64421478	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182914.2	+1	reviewed	p.R211I	1.000	273	0%	448	26.1%	0	-	probably_damaging(0.998)	-	-	HMMPfam_CH,HMMSmart_CH,superfamily_Calponin-homology
SYNE2	23224	genome.wustl.edu	37	14	64483259	64483259	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182914.2	+1	reviewed	p.K1599N	1.000	30	0%	42	45.2%	0	-	probably_damaging(0.99)	-	-	superfamily_Spectrin
SYNE2	23224	genome.wustl.edu	37	14	64483288	64483288	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182914.2	+1	reviewed	p.K1609T	0.947	38	0%	63	36.5%	0	-	probably_damaging(0.955)	-	-	superfamily_Spectrin
SYNE2	23224	genome.wustl.edu	37	14	64518863	64518863	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182914.2	+1	reviewed	p.K2744N	0.007	175	0%	305	29.2%	0	-	probably_damaging(0.99)	-	-	HMMSmart_SPEC,superfamily_Spectrin
SYNE2	23224	genome.wustl.edu	37	14	64522934	64522934	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182914.2	+1	reviewed	p.K3339	0.011	45	0%	114	35.1%	2	100%	-	-	-	superfamily_Spectrin
SYNE2	23224	genome.wustl.edu	37	14	64537607	64537607	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182914.2	+1	reviewed	p.S3559Y	0.052	72	0%	98	21.4%	4	50%	probably_damaging(0.998)	-	-	NULL
SYNE2	23224	genome.wustl.edu	37	14	64606741	64606741	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182914.2	+1	reviewed	p.N4976D	1.000	129	0%	207	29.5%	6	33.3%	unknown(0)	-	-	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
SYNE2	23224	genome.wustl.edu	37	14	64637091	64637091	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182914.2	+1	reviewed	p.L5716V	1.000	91	0%	154	37%	8	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Spectrin
ESR2	2100	genome.wustl.edu	37	14	64746774	64746774	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001437.2	-1	reviewed	p.D154N	1.000	118	0%	200	33%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C4,HMMSmart_SM00399,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
ZBTB1	22890	genome.wustl.edu	37	14	64988838	64988838	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001123329.1	+1	validated	p.E206*	1.000	101	0%	137	36.5%	15	66.6%	-	-	-	NULL
PPP1R36	145376	genome.wustl.edu	37	14	65053998	65053998	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172365.1	+1	predicted	p.L266	0.998	196	0%	321	39.6%	1	0%	-	-	-	NULL
SPTB	6710	genome.wustl.edu	37	14	65240055	65240055	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024858.2	-1	reviewed	p.E1687D	1.000	119	0.8%	188	34%	14	57.1%	benign(0.003)	tolerated(0.89)	-	HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_Spectrin
FUT8	2530	genome.wustl.edu	37	14	66083023	66083023	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178154.1	+1	reviewed	p.K138	0.995	98	0%	83	25.3%	7	28.5%	-	-	-	NULL
GPHN	10243	genome.wustl.edu	37	14	67147902	67147902	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020806.4	+1	reviewed	p.L48	0.998	220	0%	169	30.8%	0	-	-	-	-	HMMPfam_MoCF_biosynth,superfamily_MoCF_biosynth
GPHN	10243	genome.wustl.edu	37	14	67431927	67431927	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020806.4	+1	reviewed	p.S283F	1.000	305	0%	280	39.3%	5	40%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	NULL
GPHN	10243	genome.wustl.edu	37	14	67567593	67567593	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020806.4	+1	reviewed	p.R420C	1.000	222	0.5%	453	34.2%	4	50%	probably_damaging(1)	tolerated(0.07)	deleterious(0.819)	HMMPfam_MoeA_N,superfamily_MoeA_N
GPHN	10243	genome.wustl.edu	37	14	67626169	67626169	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020806.4	+1	reviewed	p.A625V	1.000	314	0%	411	30.2%	9	33.3%	probably_damaging(0.953)	deleterious(0.01)	deleterious(0.802)	HMMPfam_MoCF_biosynth,superfamily_MoCF_biosynth,PatternScan_MOCF_BIOSYNTHESIS_2
GPHN	10243	genome.wustl.edu	37	14	67646337	67646337	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020806.4	+1	reviewed	p.R708W	1.000	176	0%	263	37.6%	9	55.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MoeA_C,superfamily_MoeA_C
FAM71D	161142	genome.wustl.edu	37	14	67675013	67675013	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173526.2	+1	validated	p.N336S	0.727	149	0%	281	39.1%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
FAM71D	161142	genome.wustl.edu	37	14	67691837	67691837	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173526.2	+1	validated	p.L398I	0.000	353	0%	701	30.7%	0	-	benign(0.079)	-	-	NULL
MPP5	64398	genome.wustl.edu	37	14	67783593	67783593	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022474.2	+1	validated	p.E424*	1.000	122	0%	182	27.5%	2	0%	-	-	-	superfamily_SH3-domain
EIF2S1	1965	genome.wustl.edu	37	14	67847476	67847476	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004094.4	+1	validated	p.R192*	1.000	57	0%	76	38.2%	12	0%	-	-	-	HMMPfam_EIF_2_alpha,superfamily_eIF-2-alpha C-terminal domain
ZFYVE26	23503	genome.wustl.edu	37	14	68220817	68220817	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015346.3	-1	reviewed	p.N2367D	1.000	169	0%	254	26%	25	36%	possibly_damaging(0.911)	tolerated(0.46)	neutral(0.375)	NULL
ZFYVE26	23503	genome.wustl.edu	37	14	68221958	68221958	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015346.3	-1	reviewed	p.R2266W	1.000	194	0%	308	33.4%	9	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZFYVE26	23503	genome.wustl.edu	37	14	68250124	68250124	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015346.3	-1	reviewed	p.L1249F	0.394	77	0%	129	31.8%	10	70%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	NULL
GALNTL1	57452	genome.wustl.edu	37	14	69792727	69792727	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020692.2	+1	validated	p.R184H	1.000	156	0.6%	202	30.7%	3	33.3%	possibly_damaging(0.56)	deleterious(0)	deleterious(0.635)	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
KIAA0247	9766	genome.wustl.edu	37	14	70170206	70170206	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014734.3	+1	validated	p.Y72*	1.000	103	0%	175	37.1%	4	0%	-	-	-	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
SRSF5	6430	genome.wustl.edu	37	14	70234854	70234854	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039465.1	+1	validated	e1-1	0.907	158	0.6%	408	35%	7	85.7%	-	-	-	-
SRSF5	6430	genome.wustl.edu	37	14	70235601	70235601	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039465.1	+1	validated	p.R95Q	1.000	134	0.7%	245	31%	131	56.4%	benign(0.072)	tolerated(0.38)	neutral(0.023)	superfamily_RNA-binding domain RBD
SMOC1	64093	genome.wustl.edu	37	14	70489920	70489920	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034852.1	+1	validated	p.R349	1.000	85	0%	112	36.6%	0	-	-	-	-	superfamily_EF-hand
SLC8A3	6547	genome.wustl.edu	37	14	70633370	70633370	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183002.1	-1	reviewed	p.K590	1.000	212	0%	212	29.7%	2	50%	-	-	-	HMMPfam_Calx-beta,HMMSmart_SM00237
ENSG00000235812	0	genome.wustl.edu	37	14	70713401	70713401	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000433248	-1	known	p.N156T	0.005	231	0%	318	26.7%	0	-	-	-	-	"HMMPfam_Reprolysin,superfamily_Metalloproteases (""zincins"") catalytic domain"
ADAM21	8747	genome.wustl.edu	37	14	70924525	70924525	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003813.2	+1	reviewed	p.L103	0.538	164	0%	182	31.3%	0	-	-	-	-	HMMPfam_Pep_M12B_propep
ADAM21	8747	genome.wustl.edu	37	14	70924745	70924745	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003813.2	+1	reviewed	p.E177K	0.079	121	0%	146	32.9%	0	-	benign(0.008)	tolerated(0.28)	neutral(0.032)	NULL
PCNX	22990	genome.wustl.edu	37	14	71445297	71445297	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014982.2	+1	validated	p.R748Q	1.000	84	0%	163	28.8%	3	33.3%	benign(0.098)	tolerated(0.25)	neutral(0.044)	NULL
SIPA1L1	26037	genome.wustl.edu	37	14	72055902	72055902	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015556.1	+1	provisional	p.S438F	1.000	186	0%	234	29.9%	2	0%	possibly_damaging(0.95)	tolerated(0.08)	deleterious(0.694)	NULL
SIPA1L1	26037	genome.wustl.edu	37	14	72117051	72117051	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015556.1	+1	provisional	e4-1	1.000	131	0%	143	33.6%	0	-	-	-	-	-
SIPA1L1	26037	genome.wustl.edu	37	14	72117198	72117198	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015556.1	+1	provisional	p.E655D	1.000	135	0.7%	139	29.5%	4	0%	benign(0.001)	tolerated(0.41)	neutral(0.015)	HMMPfam_Rap_GAP,superfamily_Rap/Ran-GAP (Pfam 02145)
DPF3	8110	genome.wustl.edu	37	14	73190365	73190365	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012074.3	-1	provisional	p.K167N	1.000	652	0%	815	34.2%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
DCAF4	26094	genome.wustl.edu	37	14	73413872	73413872	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015604.3	+1	reviewed	p.S234L	1.000	149	0%	245	36.3%	15	53.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_WD40 repeat-like
PSEN1	5663	genome.wustl.edu	37	14	73653605	73653605	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000021.3	+1	reviewed	p.F175L	1.000	415	0.2%	696	29.9%	30	43.3%	probably_damaging(0.973)	deleterious(0.01)	deleterious(0.821)	HMMPfam_Presenilin,HMMSmart_SM00730
PAPLN	89932	genome.wustl.edu	37	14	73732154	73732154	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173462.3	+1	validated	p.E1041K	0.122	43	0%	30	56.7%	5	0%	probably_damaging(0.954)	tolerated(0.84)	neutral(0.398)	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726
DNAL1	83544	genome.wustl.edu	37	14	74154059	74154059	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031427.2	+1	validated	p.Y121C	1.000	120	0%	203	37.4%	10	30%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMSmart_SM00365,superfamily_L domain-like
COQ6	51004	genome.wustl.edu	37	14	74422206	74422206	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182476.1	+1	validated	p.R117	0.678	298	0%	486	36.2%	18	38.8%	-	-	-	HMMPfam_FAD_binding_3,superfamily_SSF51905
COQ6	51004	genome.wustl.edu	37	14	74424864	74424864	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182476.1	+1	validated	p.L166I	1.000	77	0%	167	35.9%	16	68.7%	possibly_damaging(0.925)	tolerated(0.25)	neutral(0.410)	HMMPfam_FAD_binding_3,superfamily_SSF51905
C14orf45	80127	genome.wustl.edu	37	14	74522318	74522318	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025057.2	+1	validated	p.D440Y	1.000	176	0%	365	31.8%	4	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ABCD4	5826	genome.wustl.edu	37	14	74753136	74753136	+	RNA	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_003256.2	-1	reviewed	NULL	0.001	30	0%	40	25%	62	37%	benign(0.007)	deleterious(0.02)	neutral(0.383)	-
KIAA0317	9870	genome.wustl.edu	37	14	75134250	75134250	+	Silent	SNP	C	C	T	rs139207671	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039479.1	-1	validated	p.A654	0.404	145	0.7%	246	26.4%	9	22.2%	-	-	-	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
YLPM1	56252	genome.wustl.edu	37	14	75265136	75265136	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019589.2	+1	validated	p.S1046G	0.001	99	0%	240	40.8%	21	38%	benign(0.001)	tolerated(0.11)	neutral(0.272)	NULL
YLPM1	56252	genome.wustl.edu	37	14	75283371	75283371	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019589.2	+1	validated	p.S1888Y	1.000	88	0%	170	32.9%	29	41.3%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	superfamily_P-loop containing nucleoside triphosphate hydrolases
PROX2	283571	genome.wustl.edu	37	14	75321889	75321889	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080408.1	-1	provisional	p.S575	0.984	177	0%	197	28.4%	0	-	-	-	-	HMMPfam_Prox1,superfamily_Homeodomain-like
RPS6KL1	83694	genome.wustl.edu	37	14	75376665	75376665	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031464.3	-1	validated	p.S253Y	0.967	104	0%	157	38.9%	0	-	possibly_damaging(0.834)	deleterious(0)	deleterious(0.762)	superfamily_Kinase_like
MLH3	27030	genome.wustl.edu	37	14	75515686	75515686	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040108.1	-1	reviewed	p.E225*	1.000	71	0%	89	20.2%	1	0%	-	-	-	HMMPfam_DNA_mis_repair,superfamily_Ribosomal protein S5 domain 2-like
ZC2HC1C	79696	genome.wustl.edu	37	14	75538273	75538273	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024643.2	+1	validated	p.A333S	0.988	58	0%	133	36.1%	5	60%	possibly_damaging(0.949)	deleterious(0.03)	deleterious(0.758)	NULL
NEK9	91754	genome.wustl.edu	37	14	75576490	75576490	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033116.4	-1	validated	p.Q360H	1.000	59	0%	108	44.4%	16	18.7%	benign(0.192)	tolerated(0.13)	neutral(0.271)	superfamily_RCC1/BLIP-II
FLVCR2	55640	genome.wustl.edu	37	14	76045470	76045470	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017791.2	+1	validated	p.S52L	0.078	211	0%	279	33.3%	1	0%	possibly_damaging(0.87)	deleterious(0.03)	deleterious(0.703)	NULL
TTLL5	23093	genome.wustl.edu	37	14	76286442	76286442	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015072.4	+1	reviewed	p.P1088	0.001	101	0%	156	33.3%	32	50%	-	-	-	NULL
C14orf118	55668	genome.wustl.edu	37	14	76647116	76647116	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017926.2	+1	validated	p.L373M	0.492	345	0%	463	31.7%	9	11.1%	probably_damaging(1)	tolerated(0.19)	deleterious(0.549)	NULL
ANGEL1	23357	genome.wustl.edu	37	14	77269825	77269825	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015305.3	-1	validated	e7-1	1.000	63	0%	76	25%	0	-	-	-	-	-
C14orf166B	145497	genome.wustl.edu	37	14	77294739	77294739	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194287.2	+1	validated	p.S65L	0.867	67	0%	101	33.7%	0	-	probably_damaging(0.958)	tolerated(0.28)	neutral(0.433)	NULL
TMEM63C	57156	genome.wustl.edu	37	14	77706878	77706878	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020431.2	+1	validated	p.E331K	1.000	50	0%	50	32%	0	-	probably_damaging(0.999)	tolerated(0.18)	deleterious(0.546)	NULL
TMEM63C	57156	genome.wustl.edu	37	14	77712997	77712997	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020431.2	+1	validated	p.E527	0.134	273	0%	362	34%	0	-	-	-	-	HMMPfam_DUF221
GSTZ1	2954	genome.wustl.edu	37	14	77796097	77796097	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145870.2	+1	reviewed	e7-1	1.000	123	0%	157	28.7%	0	-	-	-	-	-
SAMD15	161394	genome.wustl.edu	37	14	77844087	77844087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010860.1	+1	provisional	p.S109L	0.001	59	0%	156	25%	3	100%	possibly_damaging(0.553)	deleterious(0.01)	deleterious(0.594)	NULL
NOXRED1	122945	genome.wustl.edu	37	14	77880306	77880306	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113475.1	-1	validated	p.R107Q	0.994	68	0%	108	36.1%	2	0%	benign(0.364)	tolerated(0.33)	neutral(0.140)	HMMPfam_F420_oxidored,superfamily_NAD(P)-bd
C14orf133	63894	genome.wustl.edu	37	14	77893974	77893974	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022067.2	-1	provisional	p.I489	1.000	111	0%	188	36.7%	25	40%	-	-	-	HMMPfam_Golgin_A5
SLIRP	81892	genome.wustl.edu	37	14	78174474	78174474	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031210.4	+1	validated	p.R7K	0.000	104	0%	169	34.9%	179	42.4%	unknown(0)	tolerated(0.7)	-	NULL
ADCK1	57143	genome.wustl.edu	37	14	78374153	78374153	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020421.3	+1	validated	p.R250Q	0.000	112	0%	207	36.2%	1	100%	benign(0.014)	tolerated(0.08)	neutral(0.300)	HMMPfam_ABC1,superfamily_Kinase_like
NRXN3	9369	genome.wustl.edu	37	14	79117611	79117611	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004796.4	+1	reviewed	p.S15I	1.000	170	0%	136	35.3%	0	-	possibly_damaging(0.917)	deleterious(0)	deleterious(0.812)	superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2
NRXN3	9369	genome.wustl.edu	37	14	79181309	79181309	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004796.4	+1	reviewed	p.R251Q	1.000	61	0%	92	34.8%	0	-	benign(0.139)	tolerated(0.1)	neutral(0.298)	superfamily_ConA_like_lec_gl
NRXN3	9369	genome.wustl.edu	37	14	79746790	79746790	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105250.1	+1	reviewed	p.H52Q	1.000	298	0%	385	35.3%	2	0%	benign(0)	tolerated(0.31)	neutral(0.027)	NULL
TSHR	7253	genome.wustl.edu	37	14	81574911	81574911	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142626.2	+1	reviewed	p.V237	0.001	286	0%	372	33.1%	0	-	-	-	-	superfamily_L domain-like
TSHR	7253	genome.wustl.edu	37	14	81610267	81610267	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000369.2	+1	reviewed	p.I622T	1.000	218	0%	369	20.3%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
STON2	85439	genome.wustl.edu	37	14	81743400	81743400	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033104.2	-1	provisional	p.S752Y	1.000	178	0%	166	30.7%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Adap_comp_sub,superfamily_Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
FLRT2	23768	genome.wustl.edu	37	14	86088162	86088162	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013231.4	+1	reviewed	p.E102K	1.000	139	0%	131	32.8%	0	-	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	superfamily_SSF52058
FLRT2	23768	genome.wustl.edu	37	14	86088440	86088440	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013231.4	+1	reviewed	p.V194	0.994	129	0.8%	151	39.7%	2	0%	-	-	-	superfamily_SSF52058
FLRT2	23768	genome.wustl.edu	37	14	86089066	86089066	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013231.4	+1	reviewed	p.S403L	0.003	129	0%	222	30.6%	0	-	benign(0)	tolerated(0.27)	neutral(0.034)	NULL
FLRT2	23768	genome.wustl.edu	37	14	86089067	86089067	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013231.4	+1	reviewed	p.S403	0.000	132	0%	223	32.7%	0	-	-	-	-	NULL
GALC	2581	genome.wustl.edu	37	14	88407804	88407804	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000153.2	-1	reviewed	p.R590I	1.000	223	0.4%	140	34.3%	6	50%	probably_damaging(0.97)	tolerated(0.19)	neutral(0.462)	HMMPfam_Glyco_hydro_59
GPR65	8477	genome.wustl.edu	37	14	88477685	88477685	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003608.3	+1	validated	p.S165Y	0.004	118	0%	141	34%	1	0%	probably_damaging(0.956)	tolerated(1)	neutral(0.400)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
GPR65	8477	genome.wustl.edu	37	14	88478056	88478056	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003608.3	+1	validated	p.L289M	1.000	250	0%	196	39.3%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
KCNK10	54207	genome.wustl.edu	37	14	88729741	88729741	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138317.2	-1	reviewed	p.Q69H	1.000	56	0%	95	30.5%	0	-	benign(0.002)	tolerated(0.07)	neutral(0.319)	superfamily_Voltage-gated potassium channels
SPATA7	55812	genome.wustl.edu	37	14	88862513	88862513	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018418.4	+1	reviewed	p.C68	1.000	112	0%	114	28.1%	5	60%	-	-	-	NULL
SPATA7	55812	genome.wustl.edu	37	14	88892857	88892857	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018418.4	+1	reviewed	p.S218	0.013	60	0%	58	31%	4	25%	-	-	-	NULL
SPATA7	55812	genome.wustl.edu	37	14	88904509	88904509	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018418.4	+1	reviewed	p.L515I	0.000	74	0%	95	37.9%	32	46.8%	benign(0.261)	tolerated(0.36)	neutral(0.047)	NULL
EML5	161436	genome.wustl.edu	37	14	89124599	89124599	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183387.2	-1	validated	p.M1270R	0.809	131	0%	181	19.9%	0	-	benign(0.001)	tolerated(0.4)	neutral(0.016)	superfamily_WD40 repeat-like
EML5	161436	genome.wustl.edu	37	14	89124730	89124730	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183387.2	-1	validated	p.G1226	1.000	73	0%	91	29.7%	0	-	-	-	-	superfamily_WD40 repeat-like
EML5	161436	genome.wustl.edu	37	14	89181303	89181303	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_183387.2	-1	validated	p.R475I	1.000	151	0%	103	34%	0	-	possibly_damaging(0.949)	deleterious(0.02)	deleterious(0.776)	HMMSmart_SM00320,superfamily_WD40 repeat-like
PSMC1	5700	genome.wustl.edu	37	14	90735888	90735888	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002802.2	+1	reviewed	p.R343S	0.997	313	0%	620	32.4%	185	42.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
C14orf102	55051	genome.wustl.edu	37	14	90769176	90769176	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017970.2	-1	validated	p.S433	0.002	80	0%	142	32.4%	3	33.3%	-	-	-	HMMPfam_DUF1740,superfamily_Prenyl_trans
C14orf102	55051	genome.wustl.edu	37	14	90783068	90783068	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017970.2	-1	validated	p.K87N	1.000	146	0%	237	30.8%	0	-	probably_damaging(0.999)	tolerated(0.22)	deleterious(0.532)	NULL
TTC7B	145567	genome.wustl.edu	37	14	91059889	91059889	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010854.1	-1	provisional	p.A683V	0.998	69	0%	81	37%	14	42.8%	benign(0)	tolerated(1)	-	superfamily_TPR-like
TTC7B	145567	genome.wustl.edu	37	14	91119239	91119239	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010854.1	-1	provisional	p.S488Y	1.000	129	0%	201	13.9%	4	0%	probably_damaging(0.976)	tolerated(0.32)	neutral(0.442)	superfamily_TPR-like
TTC7B	145567	genome.wustl.edu	37	14	91142892	91142892	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010854.1	-1	provisional	p.R376K	1.000	98	0%	145	39.3%	8	25%	probably_damaging(0.982)	tolerated(0.94)	neutral(0.426)	superfamily_TPR-like
RPS6KA5	9252	genome.wustl.edu	37	14	91360761	91360761	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004755.2	-1	validated	p.P547H	1.000	148	0%	185	33%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_S_TKc,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMPfam_Pkinase
CCDC88C	440193	genome.wustl.edu	37	14	91739846	91739846	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080414.2	-1	validated	p.A1737V	0.000	34	0%	61	36.1%	24	75%	benign(0)	tolerated(0.95)	-	NULL
CCDC88C	440193	genome.wustl.edu	37	14	91774698	91774698	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080414.2	-1	validated	p.Q1001H	0.838	261	0%	519	34.7%	12	58.3%	benign(0.159)	tolerated(0.18)	neutral(0.070)	NULL
CCDC88C	440193	genome.wustl.edu	37	14	91804433	91804433	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080414.2	-1	validated	p.A322	0.010	55	0%	71	25.4%	7	57.1%	-	-	-	NULL
CATSPERB	79820	genome.wustl.edu	37	14	92159551	92159551	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024764.2	-1	validated	p.T250	0.992	136	0%	187	30.5%	0	-	-	-	-	NULL
TRIP11	9321	genome.wustl.edu	37	14	92460183	92460183	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004239.3	-1	reviewed	p.E1710D	0.969	369	0%	452	30.5%	24	37.5%	benign(0.061)	tolerated(0.48)	neutral(0.015)	NULL
TRIP11	9321	genome.wustl.edu	37	14	92471286	92471286	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004239.3	-1	reviewed	p.D1012Y	1.000	135	0%	124	29%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TRIP11	9321	genome.wustl.edu	37	14	92480618	92480618	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004239.3	-1	reviewed	p.R376I	0.000	203	0%	335	27.8%	2	100%	benign(0.08)	tolerated(0.07)	neutral(0.325)	NULL
TRIP11	9321	genome.wustl.edu	37	14	92488059	92488059	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004239.3	-1	reviewed	p.S143	0.000	104	0%	143	32.9%	1	0%	-	-	-	NULL
CPSF2	53981	genome.wustl.edu	37	14	92600494	92600494	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017437.1	+1	validated	p.F97L	1.000	294	0%	575	31.7%	15	40%	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	superfamily_Metallo-hydrolase/oxidoreductase
CPSF2	53981	genome.wustl.edu	37	14	92608529	92608529	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017437.1	+1	validated	p.R228Q	1.000	213	0%	404	30%	22	50%	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	superfamily_Metallo-hydrolase/oxidoreductase
SLC24A4	123041	genome.wustl.edu	37	14	92792260	92792260	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153646.2	+1	validated	p.R43K	1.000	110	0%	217	30.4%	0	-	benign(0.146)	tolerated(0.36)	neutral(0.033)	NULL
LGMN	5641	genome.wustl.edu	37	14	93185138	93185138	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008530.1	-1	reviewed	p.E64K	1.000	234	0%	418	34.4%	112	29.4%	benign(0.052)	deleterious(0)	neutral(0.448)	HMMPfam_Peptidase_C13
UBR7	55148	genome.wustl.edu	37	14	93684946	93684946	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175748.3	+1	validated	p.K225	0.025	53	0%	222	34.7%	14	42.8%	-	-	-	NULL
UNC79	57578	genome.wustl.edu	37	14	94044259	94044259	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020818.3	+1	validated	p.Q584H	1.000	215	0%	292	35.3%	0	-	benign(0)	tolerated(0.12)	neutral(0.261)	NULL
UNC79	57578	genome.wustl.edu	37	14	94088662	94088662	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020818.3	+1	validated	p.D1518Y	1.000	73	0%	105	43.8%	0	-	possibly_damaging(0.906)	deleterious(0.01)	deleterious(0.765)	NULL
UNC79	57578	genome.wustl.edu	37	14	94088923	94088923	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020818.3	+1	validated	p.G1605W	0.981	61	0%	91	27.5%	0	-	possibly_damaging(0.816)	deleterious(0)	deleterious(0.753)	NULL
UNC79	57578	genome.wustl.edu	37	14	94089018	94089018	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020818.3	+1	validated	p.Q1636	1.000	92	0%	146	29.5%	0	-	-	-	-	NULL
UNC79	57578	genome.wustl.edu	37	14	94125564	94125564	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020818.3	+1	validated	p.I2023S	1.000	194	0%	164	37.8%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
UNC79	57578	genome.wustl.edu	37	14	94129017	94129017	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020818.3	+1	validated	p.Y2060C	1.000	229	0%	231	30.7%	0	-	benign(0.167)	tolerated(0.19)	neutral(0.065)	NULL
FAM181A	90050	genome.wustl.edu	37	14	94394670	94394670	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138344.3	+1	predicted	p.F75	0.819	74	0%	55	32.7%	0	-	-	-	-	NULL
PPP4R4	57718	genome.wustl.edu	37	14	94744971	94744971	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_058237.1	+1	reviewed	p.S871	1.000	151	0%	169	28.4%	0	-	-	-	-	NULL
SERPINA10	51156	genome.wustl.edu	37	14	94752574	94752574	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100607.1	-1	reviewed	p.P338	0.846	136	0%	167	26.9%	0	-	-	-	-	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
SERPINA6	866	genome.wustl.edu	37	14	94780383	94780383	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001756.3	-1	reviewed	p.I201	1.000	149	0%	181	30.9%	0	-	-	-	-	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
DICER1	23405	genome.wustl.edu	37	14	95562931	95562931	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030621.3	-1	reviewed	p.F1442L	0.983	172	0.6%	187	35.3%	3	33.3%	benign(0)	tolerated(0.86)	neutral(0.001)	HMMPfam_Ribonuclease_3,HMMSmart_RIBOc,superfamily_RNase_III
CLMN	79789	genome.wustl.edu	37	14	95669414	95669414	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024734.3	-1	validated	p.E758K	0.003	79	0%	94	31.9%	1	0%	probably_damaging(0.958)	deleterious(0)	deleterious(0.846)	NULL
CLMN	79789	genome.wustl.edu	37	14	95670711	95670711	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024734.3	-1	validated	p.V325	0.869	200	0%	329	27.4%	3	66.6%	-	-	-	NULL
ATG2B	55102	genome.wustl.edu	37	14	96782950	96782950	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018036.5	-1	validated	p.F1094C	1.000	186	0%	244	41.4%	1	0%	possibly_damaging(0.614)	deleterious(0)	deleterious(0.657)	NULL
ATG2B	55102	genome.wustl.edu	37	14	96791988	96791988	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018036.5	-1	validated	p.I812T	0.004	98	0%	126	34.9%	0	-	benign(0)	tolerated(0.53)	neutral(0.007)	NULL
AK7	122481	genome.wustl.edu	37	14	96912866	96912866	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152327.2	+1	validated	p.N264	0.943	128	0%	291	37.1%	1	0%	-	-	-	superfamily_NAD(P)-binding Rossmann-fold domains
AK7	122481	genome.wustl.edu	37	14	96917830	96917830	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152327.2	+1	validated	p.R341*	0.515	133	0%	279	27.6%	1	0%	-	-	-	NULL
PAPOLA	10914	genome.wustl.edu	37	14	96993812	96993812	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032632.3	+1	validated	p.R126Q	1.000	508	0%	859	33.8%	44	15.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_NTP_transf_2,HMMPfam_PAP_central,superfamily_Nucleotidyltransferase
PAPOLA	10914	genome.wustl.edu	37	14	96998943	96998943	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032632.3	+1	validated	p.A265S	1.000	244	0%	308	27.9%	40	27.5%	probably_damaging(0.974)	deleterious(0.03)	deleterious(0.780)	HMMPfam_PAP_central,superfamily_PAP/OAS1 substrate-binding domain
BCL11B	64919	genome.wustl.edu	37	14	99640520	99640520	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138576.2	-1	reviewed	p.D885N	1.000	89	0%	105	41%	0	-	possibly_damaging(0.722)	deleterious(0)	deleterious(0.707)	NULL
BCL11B	64919	genome.wustl.edu	37	14	99640563	99640563	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138576.2	-1	reviewed	p.E870D	1.000	106	0%	119	30.3%	0	-	possibly_damaging(0.892)	deleterious(0.03)	deleterious(0.716)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
BCL11B	64919	genome.wustl.edu	37	14	99641778	99641778	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138576.2	-1	reviewed	p.S465	1.000	18	0%	34	23.5%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CYP46A1	10858	genome.wustl.edu	37	14	100157430	100157430	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000380228	+1	known	p.D1A	1.000	590	0%	970	30.4%	0	-	-	-	-	NULL
EML1	2009	genome.wustl.edu	37	14	100364580	100364580	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008707.1	+1	reviewed	p.H299N	1.000	140	0%	218	34.4%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
EML1	2009	genome.wustl.edu	37	14	100402649	100402649	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008707.1	+1	reviewed	p.S710	0.540	132	0%	178	29.2%	3	0%	-	-	-	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
WARS	7453	genome.wustl.edu	37	14	100809663	100809663	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004184.3	-1	reviewed	p.I296	1.000	136	0%	342	34.5%	82	29.2%	-	-	-	superfamily_Nucleotidylyl transferase
DLK1	8788	genome.wustl.edu	37	14	101200652	101200652	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003836.5	+1	reviewed	p.D191N	0.998	31	0%	21	28.6%	0	-	benign(0.358)	tolerated(0.09)	neutral(0.410)	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,superfamily_EGF/Laminin
DLK1	8788	genome.wustl.edu	37	14	101201122	101201122	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003836.5	+1	reviewed	p.K347N	1.000	55	0%	68	29.4%	1	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
RTL1	388015	genome.wustl.edu	37	14	101347454	101347454	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134888.2	-1	reviewed	p.V1224	0.814	24	0%	36	33.3%	0	-	-	-	-	NULL
RTL1	388015	genome.wustl.edu	37	14	101348639	101348639	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134888.2	-1	reviewed	p.I829	0.012	82	0%	129	25.6%	0	-	-	-	-	superfamily_DNA/RNA polymerases
RTL1	388015	genome.wustl.edu	37	14	101349704	101349704	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134888.2	-1	reviewed	p.L474	0.425	53	1.9%	63	28.6%	0	-	-	-	-	superfamily_Acid proteases
MIR487A	619555	genome.wustl.edu	37	14	101518815	101518815	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000384827	+1	known	NULL	1.000	280	0%	329	33.1%	0	-	-	-	-	-
MIR668	768214	genome.wustl.edu	37	14	101521639	101521639	+	RNA	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390172	+1	known	NULL	1.000	135	0.7%	176	35.2%	0	-	-	-	-	-
MIR410	574434	genome.wustl.edu	37	14	101532282	101532282	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000362222	+1	known	NULL	1.000	151	0%	150	26.7%	0	-	-	-	-	-
DYNC1H1	1778	genome.wustl.edu	37	14	102471265	102471265	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001376.4	+1	reviewed	p.I1739T	1.000	105	0%	230	30.4%	26	46.1%	benign(0.008)	tolerated(0.49)	neutral(0.011)	NULL
DYNC1H1	1778	genome.wustl.edu	37	14	102471270	102471270	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001376.4	+1	reviewed	p.W1741R	1.000	105	1%	220	32.3%	29	37.9%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
DYNC1H1	1778	genome.wustl.edu	37	14	102489091	102489091	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001376.4	+1	reviewed	p.L2837	0.035	86	0%	184	39.1%	38	42.1%	-	-	-	superfamily_SSF52540
DYNC1H1	1778	genome.wustl.edu	37	14	102506938	102506938	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001376.4	+1	reviewed	p.F3957V	1.000	94	0%	163	34.4%	181	49.1%	benign(0.003)	tolerated(0.18)	neutral(0.056)	HMMPfam_Dynein_heavy
TECPR2	9895	genome.wustl.edu	37	14	102874905	102874905	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014844.3	+1	validated	p.F143L	1.000	243	0%	462	32.5%	2	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMSmart_WD40,superfamily_WD40_like
CDC42BPB	9578	genome.wustl.edu	37	14	103412928	103412928	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006035.3	-1	reviewed	p.L1209I	0.989	90	0%	133	40.6%	45	44.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
TNFAIP2	7127	genome.wustl.edu	37	14	103592878	103592878	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006291.2	+1	reviewed	p.K28N	0.664	20	0%	30	30%	26	57.6%	probably_damaging(0.989)	tolerated(0.06)	deleterious(0.762)	NULL
MARK3	4140	genome.wustl.edu	37	14	103958316	103958316	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128918.1	+1	validated	p.R597*	1.000	89	0%	206	27.7%	59	35.5%	-	-	-	NULL
BAG5	9529	genome.wustl.edu	37	14	104027382	104027382	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001015049.1	-1	reviewed	p.K81N	1.000	91	0%	140	30.7%	12	41.6%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMPfam_BAG,HMMSmart_SM00264,superfamily_BAG domain
KLC1	3831	genome.wustl.edu	37	14	104151352	104151352	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005552.4	+1	reviewed	p.N560K	0.995	49	0%	90	35.6%	54	53.7%	benign(0.35)	deleterious(0)	deleterious(0.555)	NULL
PPP1R13B	23368	genome.wustl.edu	37	14	104208176	104208176	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015316.2	-1	reviewed	p.K591N	1.000	457	0%	759	32%	6	16.6%	benign(0.183)	tolerated(0.06)	neutral(0.340)	NULL
TDRD9	122402	genome.wustl.edu	37	14	104471720	104471720	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153046.2	+1	validated	p.R564H	0.997	142	0%	225	38.7%	0	-	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	HMMPfam_HA2,superfamily_P-loop containing nucleoside triphosphate hydrolases
ASPG	374569	genome.wustl.edu	37	14	104559689	104559689	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000299234	+1	known	p.R46I	0.003	16	0%	19	31.6%	0	-	unknown(0)	tolerated(0.08)	-	NULL
ASPG	374569	genome.wustl.edu	37	14	104571780	104571780	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080464.1	+1	provisional	p.G389V	0.011	59	0%	51	27.5%	1	0%	benign(0.097)	tolerated(0.12)	neutral(0.268)	superfamily_Ankyrin repeat
KIF26A	26153	genome.wustl.edu	37	14	104641488	104641488	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015656.1	+1	validated	p.D788G	1.000	43	0%	33	30.3%	2	50%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
INF2	64423	genome.wustl.edu	37	14	105179293	105179293	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022489.3	+1	validated	p.M913I	1.000	23	0%	27	18.5%	8	0%	-	-	-	HMMSmart_SM00498,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)
INF2	64423	genome.wustl.edu	37	14	105180753	105180753	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022489.3	+1	validated	p.V1085G	0.179	85	0%	91	19.8%	12	0%	unknown(0)	deleterious(0.01)	-	NULL
ADSSL1	122622	genome.wustl.edu	37	14	105205665	105205665	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199165.1	+1	validated	p.G163D	1.000	73	0%	99	30.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Adenylsucc_synt,HMMSmart_Adenylsucc_synt,superfamily_SSF52540
ADSSL1	122622	genome.wustl.edu	37	14	105211161	105211161	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199165.1	+1	validated	p.T405	0.989	149	0.7%	191	38.7%	3	0%	-	-	-	HMMPfam_Adenylsucc_synt,HMMSmart_Adenylsucc_synt,superfamily_SSF52540
AHNAK2	113146	genome.wustl.edu	37	14	105405320	105405320	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138420.2	-1	validated	p.L5490F	0.000	77	0%	126	32.5%	4	100%	probably_damaging(0.982)	-	-	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105407859	105407859	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138420.2	-1	validated	p.K4643N	0.192	50	0%	66	36.4%	2	50%	possibly_damaging(0.723)	tolerated(0.16)	neutral(0.322)	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105407900	105407900	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138420.2	-1	validated	p.G4630*	0.148	49	0%	68	33.8%	2	50%	-	-	-	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105413085	105413085	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138420.2	-1	validated	p.M2901I	1.000	125	0%	232	31.5%	1	100%	benign(0.126)	tolerated(0.06)	neutral(0.333)	NULL
AHNAK2	113146	genome.wustl.edu	37	14	105419825	105419825	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138420.2	-1	validated	p.K655*	0.000	318	0%	630	38.3%	2	50%	-	-	-	NULL
JAG2	3714	genome.wustl.edu	37	14	105617714	105617714	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002226.3	-1	reviewed	p.S391	0.951	25	0%	31	16.1%	5	0%	-	-	-	HMMSmart_SM00179,HMMPfam_EGF,HMMSmart_SM00181,PatternScan_EGF_CA,superfamily_EGF/Laminin
PACS2	23241	genome.wustl.edu	37	14	105843228	105843228	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100913.1	+1	validated	p.D309N	1.000	28	0%	28	39.3%	36	47.2%	possibly_damaging(0.773)	tolerated(0.08)	deleterious(0.587)	NULL
PACS2	23241	genome.wustl.edu	37	14	105856305	105856305	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100913.1	+1	validated	p.E670K	1.000	167	0%	258	29.5%	44	4.5%	benign(0.033)	deleterious(0.02)	neutral(0.385)	HMMPfam_Pacs-1
IGHE	3497	genome.wustl.edu	37	14	106066538	106066538	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390541	-1	known	p.F384L	0.613	63	0%	65	13.8%	0	-	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	HMMPfam_C1-set,HMMSmart_IGc1,superfamily_SSF48726
IGHE	3497	genome.wustl.edu	37	14	106066712	106066712	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390541	-1	known	p.V326	0.008	33	0%	27	33.3%	0	-	-	-	-	superfamily_SSF48726
IGHG4	3503	genome.wustl.edu	37	14	106090826	106090826	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390543	-1	known	p.S324Y	0.178	365	0%	444	16%	60	0%	possibly_damaging(0.944)	deleterious(0)	deleterious(0.833)	NULL
IGHG2	3501	genome.wustl.edu	37	14	106110141	106110141	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390545	-1	known	p.D159	0.000	361	0%	566	23.5%	499	0.2%	-	-	-	HMMPfam_C1-set,superfamily_SSF48726
IGHM	3507	genome.wustl.edu	37	14	106322268	106322268	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000496208	-1	known	p.S18L	0.000	91	0%	177	33.3%	60	0%	benign(0.314)	tolerated(0.06)	neutral(0.420)	HMMPfam_C1-set,superfamily_Immunoglobulin
IGHV3-7	28452	genome.wustl.edu	37	14	106518523	106518523	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390598	-1	known	p.E76D	0.000	419	0%	320	36.6%	6	0%	benign(0)	tolerated(0.46)	neutral(0.012)	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin
IGHV3-13	28449	genome.wustl.edu	37	14	106586556	106586556	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390602	-1	known	p.V11A	0.002	332	0%	448	33.7%	1	0%	benign(0.037)	tolerated(0.05)	neutral(0.347)	NULL
IGHV3-20	28445	genome.wustl.edu	37	14	106667705	106667705	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390606	-1	known	p.S76N	0.000	216	0%	220	32.3%	1	0%	benign(0)	tolerated(0.48)	neutral(0.011)	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726
IGHV@	3509	genome.wustl.edu	37	14	106725383	106725383	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390609	-1	known	p.R57C	0.975	433	0%	456	16%	20	0%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin
IGHV4-28	28400	genome.wustl.edu	37	14	106780690	106780690	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390612	-1	known	p.R58	0.617	287	0.3%	380	30.8%	0	-	-	-	-	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726
IGHV3-38	28429	genome.wustl.edu	37	14	106866621	106866621	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390618	-1	known	p.G45*	1.000	303	0.3%	342	20.5%	0	-	-	-	-	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726
IGHV4-39	28394	genome.wustl.edu	37	14	106877743	106877743	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390619	-1	known	p.S84N	0.000	303	0%	371	17.5%	10	10%	benign(0)	tolerated(0.35)	neutral(0.021)	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin
IGHV1-45	28466	genome.wustl.edu	37	14	106963094	106963094	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390621	-1	known	p.A63V	0.120	328	0%	414	35.7%	0	-	benign(0.045)	deleterious(0.01)	neutral(0.408)	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726
IGHV1-45	28466	genome.wustl.edu	37	14	106963236	106963236	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390621	-1	known	e2-1	1.000	284	0%	384	32.6%	0	-	-	-	-	-
IGHV3-48	28424	genome.wustl.edu	37	14	106993880	106993880	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390624	-1	known	p.K95N	0.816	212	0%	227	29.1%	5	0%	benign(0.02)	tolerated(0.09)	neutral(0.297)	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726
IGHV5-51	28388	genome.wustl.edu	37	14	107034804	107034804	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390626	-1	known	p.D92	0.083	318	0%	356	24.2%	15	0%	-	-	-	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726
IGHV4-61	28391	genome.wustl.edu	37	14	107095286	107095286	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390630	-1	known	p.G65E	0.998	200	0%	273	44.7%	0	-	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726
ENSG00000231400	0	genome.wustl.edu	37	15	20362794	20362794	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000442923	+1	known	p.D19G	1.000	236	0%	364	13.5%	0	-	-	-	-	HMMPfam_DUF663
ENSG00000215407	0	genome.wustl.edu	37	15	20457376	20457376	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000400226	-1	known	p.L171F	0.998	125	0%	253	11.1%	0	-	-	-	-	HMMPfam_BRO1
LOC646096	646096	genome.wustl.edu	37	15	20488775	20488775	+	RNA	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_040858.2	+1	model	NULL	1.000	106	0%	238	11.8%	0	-	-	-	-	-
OR4M2	390538	genome.wustl.edu	37	15	22368606	22368606	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004719.2	+1	validated	p.E11*	0.998	354	0%	246	24.8%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
OR4M2	390538	genome.wustl.edu	37	15	22368936	22368936	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004719.2	+1	validated	p.D121Y	1.000	551	0.2%	437	16%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4M2	390538	genome.wustl.edu	37	15	22369160	22369160	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004719.2	+1	validated	p.E195D	0.507	718	0%	668	21.4%	0	-	possibly_damaging(0.811)	deleterious(0)	deleterious(0.750)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4N4	283694	genome.wustl.edu	37	15	22383243	22383243	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005241.1	+1	provisional	p.I257	0.345	144	0%	188	39.9%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
GOLGA6L1	283767	genome.wustl.edu	37	15	22742776	22742776	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001413.3	+1	provisional	p.H387	0.003	390	0%	490	25.5%	0	-	-	-	-	NULL
TUBGCP5	114791	genome.wustl.edu	37	15	22866943	22866943	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102610.1	+1	validated	p.I820M	1.000	267	0%	388	37.4%	7	14.2%	probably_damaging(0.991)	tolerated(0.13)	deleterious(0.697)	HMMPfam_Spc97_Spc98
GOLGA8IP	283796	genome.wustl.edu	37	15	23259292	23259292	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000450802	+1	known	p.E116*	0.909	98	0%	135	25.2%	0	-	-	-	-	NULL
GOLGA8IP	283796	genome.wustl.edu	37	15	23264856	23264856	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000450802	+1	known	p.R487I	1.000	85	0%	130	16.2%	0	-	probably_damaging(0.993)	deleterious(0.01)	deleterious(0.856)	NULL
ENSG00000223681	0	genome.wustl.edu	37	15	23329979	23329979	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000422607	-1	known	p.R22*	0.997	502	0%	855	13.1%	5	0%	-	-	-	NULL
LOC653061	653061	genome.wustl.edu	37	15	23609579	23609579	+	Missense_Mutation	SNP	G	G	T	rs4036684		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343324.1	+1	model	p.E483D	1.000	83	0%	145	34.5%	0	-	-	-	-	NULL
LOC283685	283685	genome.wustl.edu	37	15	23685541	23685541	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343322.1	-1	model	p.E624fs	0.011	-	-	-	-	-	-	-	-	-	NULL
MKRN3	7681	genome.wustl.edu	37	15	23811283	23811283	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005664.3	+1	reviewed	p.S118	0.086	45	0%	31	22.6%	0	-	-	-	-	HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1
MKRN3	7681	genome.wustl.edu	37	15	23811982	23811982	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005664.3	+1	reviewed	p.R351	0.192	137	0%	185	30.8%	0	-	-	-	-	HMMSmart_RING,HMMPfam_zf-C3HC4,superfamily_SSF57850
NDN	4692	genome.wustl.edu	37	15	23931585	23931585	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002487.2	-1	reviewed	p.F260L	1.000	25	0%	21	19%	23	0%	benign(0.406)	tolerated(0.2)	neutral(0.179)	HMMPfam_MAGE
NDN	4692	genome.wustl.edu	37	15	23932116	23932116	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002487.2	-1	reviewed	p.P83	0.007	7	0.000	9	0.556	0	-	-	-	-	NULL
C15orf2	23742	genome.wustl.edu	37	15	24921682	24921682	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018958.2	+1	reviewed	p.E223G	0.000	24	0%	26	30.8%	0	-	probably_damaging(0.982)	deleterious(0.01)	deleterious(0.832)	NULL
C15orf2	23742	genome.wustl.edu	37	15	24924262	24924262	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018958.2	+1	reviewed	p.S1083Y	0.000	97	0%	131	30.5%	0	-	probably_damaging(0.997)	-	-	NULL
SNURF	8926	genome.wustl.edu	37	15	25207304	25207304	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005678.3	+1	reviewed	p.E20*	0.997	91	0%	158	36.7%	245	0%	-	-	-	HMMPfam_SNURF
ATP10A	57194	genome.wustl.edu	37	15	25924600	25924600	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024490.3	-1	reviewed	p.A1463V	0.090	40	0%	52	36.5%	1	0%	benign(0.001)	tolerated(0.71)	neutral(0.002)	NULL
ATP10A	57194	genome.wustl.edu	37	15	25947187	25947187	+	Missense_Mutation	SNP	C	C	T	rs184009994	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024490.3	-1	reviewed	p.R879H	0.997	120	0%	203	34.5%	2	0%	probably_damaging(1)	tolerated(0.18)	deleterious(0.556)	superfamily_SSF56784
ATP10A	57194	genome.wustl.edu	37	15	25981250	25981250	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024490.3	-1	reviewed	p.I231	0.960	110	0%	163	30.1%	1	0%	-	-	-	HMMPfam_E1-E2_ATPase,superfamily_SSF81653
ATP10A	57194	genome.wustl.edu	37	15	26026192	26026192	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024490.3	-1	reviewed	p.Q210K	1.000	58	0%	105	42.9%	0	-	benign(0.012)	tolerated(0.15)	neutral(0.241)	HMMPfam_E1-E2_ATPase,superfamily_SSF81653
GABRA5	2558	genome.wustl.edu	37	15	27185078	27185078	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000810.3	+1	reviewed	p.Y244C	1.000	191	0%	282	26.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD
GABRA5	2558	genome.wustl.edu	37	15	27193289	27193289	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000810.3	+1	reviewed	p.F433S	1.000	59	0%	63	33.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
GABRG3	2567	genome.wustl.edu	37	15	27572100	27572100	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033223.4	+1	validated	p.A139T	1.000	164	0%	234	31.6%	1	0%	possibly_damaging(0.606)	tolerated(0.09)	deleterious(0.506)	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD
OCA2	4948	genome.wustl.edu	37	15	28090127	28090127	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000275.2	-1	reviewed	p.F804L	1.000	87	0%	97	34%	0	-	possibly_damaging(0.817)	tolerated(0.39)	neutral(0.325)	NULL
OCA2	4948	genome.wustl.edu	37	15	28234811	28234811	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000275.2	-1	reviewed	p.R373I	1.000	138	0%	219	33.3%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_CitMHS
OCA2	4948	genome.wustl.edu	37	15	28267671	28267671	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000275.2	-1	reviewed	p.A208T	1.000	145	0%	240	28.7%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
HERC2	8924	genome.wustl.edu	37	15	28436162	28436162	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004667.4	-1	reviewed	p.I2866	1.000	236	0%	374	27.5%	6	100%	-	-	-	superfamily_Galactose-binding domain-like
HERC2	8924	genome.wustl.edu	37	15	28459291	28459291	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004667.4	-1	reviewed	p.L2162	1.000	56	0%	113	36.3%	4	25%	-	-	-	NULL
HERC2	8924	genome.wustl.edu	37	15	28499628	28499628	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004667.4	-1	reviewed	p.E970*	1.000	285	0%	489	31.7%	0	-	-	-	-	NULL
HERC2	8924	genome.wustl.edu	37	15	28511092	28511092	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004667.4	-1	reviewed	p.A543T	0.996	56	0%	62	29%	1	100%	benign(0.001)	tolerated(0.19)	neutral(0.050)	HMMPfam_RCC1,superfamily_RCC1/BLIP-II
APBA2	321	genome.wustl.edu	37	15	29393975	29393975	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005503.3	+1	reviewed	p.F504	0.998	56	0%	61	39.3%	3	0%	-	-	-	HMMPfam_PID,HMMSmart_PTB,superfamily_SSF50729
TJP1	7082	genome.wustl.edu	37	15	30012599	30012599	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003257.3	-1	validated	p.R909I	1.000	415	0%	643	37.2%	11	45.4%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
TJP1	7082	genome.wustl.edu	37	15	30020146	30020146	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003257.3	-1	validated	p.D699Y	1.000	270	0%	321	24.9%	6	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Guanylate_kin,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
ARHGAP11B	89839	genome.wustl.edu	37	15	30927322	30927322	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039841.1	+1	provisional	p.V197	1.000	165	0%	290	30%	0	-	-	-	-	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP
MTMR10	54893	genome.wustl.edu	37	15	31234193	31234193	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017762.2	-1	validated	p.R605I	1.000	183	0%	301	34.9%	15	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_(Phosphotyrosine protein) phosphatases II
MTMR10	54893	genome.wustl.edu	37	15	31235126	31235126	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017762.2	-1	validated	p.Q566H	0.973	231	0%	347	34%	21	28.5%	benign(0.01)	tolerated(0.05)	neutral(0.346)	superfamily_(Phosphotyrosine protein) phosphatases II
TRPM1	4308	genome.wustl.edu	37	15	31325051	31325051	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002420.4	-1	reviewed	p.T909	0.965	197	0%	318	28.3%	0	-	-	-	-	HMMPfam_Ion_trans
TRPM1	4308	genome.wustl.edu	37	15	31341667	31341667	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002420.4	-1	reviewed	p.R473C	0.999	149	0%	211	34.6%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
TRPM1	4308	genome.wustl.edu	37	15	31355375	31355375	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002420.4	-1	reviewed	p.S282I	1.000	84	0%	120	29.2%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
TRPM1	4308	genome.wustl.edu	37	15	31358373	31358373	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002420.4	-1	reviewed	p.I210	1.000	349	0%	699	30.8%	0	-	-	-	-	NULL
CHRNA7	1139	genome.wustl.edu	37	15	32450797	32450797	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000746.3	+1	reviewed	p.K261	0.975	273	0%	291	19.6%	0	-	-	-	-	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
FMN1	342184	genome.wustl.edu	37	15	33359906	33359906	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001103184.2	-1	validated	p.F60L	0.988	86	0%	125	34.4%	2	0%	unknown(0)	deleterious(0)	-	NULL
RYR3	6263	genome.wustl.edu	37	15	33795930	33795930	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001036.3	+1	validated	p.G90	1.000	149	0%	149	27.5%	0	-	-	-	-	HMMPfam_Ins145_P3_rec
RYR3	6263	genome.wustl.edu	37	15	33833085	33833085	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001036.3	+1	validated	p.E214K	0.997	132	0%	81	32.1%	0	-	benign(0.007)	-	-	NULL
RYR3	6263	genome.wustl.edu	37	15	33872323	33872323	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001036.3	+1	validated	p.R472I	1.000	94	0%	148	23.6%	0	-	probably_damaging(0.995)	-	-	HMMPfam_RYDR_ITPR
RYR3	6263	genome.wustl.edu	37	15	33936585	33936585	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001036.3	+1	validated	p.F1210L	1.000	152	0%	212	24.5%	0	-	probably_damaging(0.971)	-	-	NULL
RYR3	6263	genome.wustl.edu	37	15	34032048	34032048	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001036.3	+1	validated	p.L2558I	1.000	205	0%	284	25.4%	0	-	probably_damaging(0.978)	-	-	NULL
RYR3	6263	genome.wustl.edu	37	15	34080464	34080464	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001036.3	+1	validated	p.R3212I	0.998	67	0%	90	40%	0	-	benign(0.027)	-	-	NULL
RYR3	6263	genome.wustl.edu	37	15	34093041	34093041	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001036.3	+1	validated	p.L3301M	1.000	270	0%	307	35.5%	0	-	possibly_damaging(0.826)	-	-	NULL
RYR3	6263	genome.wustl.edu	37	15	34130072	34130072	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001036.3	+1	validated	p.S3964L	0.999	122	0%	178	33.1%	0	-	probably_damaging(0.979)	-	-	superfamily_EF-hand
AVEN	57099	genome.wustl.edu	37	15	34163147	34163147	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020371.2	-1	validated	p.E201K	0.998	68	0%	98	42.9%	13	15.3%	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
AVEN	57099	genome.wustl.edu	37	15	34295339	34295339	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020371.2	-1	validated	p.K113N	0.998	203	0%	212	33.5%	7	14.2%	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	NULL
CHRM5	1133	genome.wustl.edu	37	15	34354988	34354988	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012125.3	+1	validated	p.R24C	0.208	172	0%	354	32.8%	2	50%	possibly_damaging(0.575)	deleterious(0.04)	deleterious(0.546)	superfamily_SSF81321
CHRM5	1133	genome.wustl.edu	37	15	34355562	34355562	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012125.3	+1	validated	p.R215Q	1.000	120	0%	153	27.5%	0	-	possibly_damaging(0.919)	tolerated(0.17)	neutral(0.428)	HMMPfam_7tm_1,superfamily_SSF81321
PGBD4	161779	genome.wustl.edu	37	15	34395586	34395586	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152595.4	+1	validated	p.S285Y	0.995	46	0%	91	39.6%	2	50%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
SLC12A6	9990	genome.wustl.edu	37	15	34527405	34527405	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133647.1	-1	reviewed	p.R1113Q	1.000	132	0%	201	30.8%	6	50%	benign(0.349)	tolerated(0.11)	neutral(0.382)	NULL
C15orf55	256646	genome.wustl.edu	37	15	34646922	34646922	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175741.1	+1	validated	p.F423V	1.000	155	0%	375	34.9%	0	-	possibly_damaging(0.602)	deleterious(0)	deleterious(0.653)	NULL
C15orf55	256646	genome.wustl.edu	37	15	34648436	34648436	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175741.1	+1	validated	p.D715N	0.000	29	0%	56	28.6%	0	-	benign(0.006)	tolerated(0.93)	-	NULL
GJD2	57369	genome.wustl.edu	37	15	35046623	35046623	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020660.1	-1	provisional	p.G23R	1.000	36	0%	25	16%	0	-	benign(0.092)	deleterious(0)	neutral(0.452)	HMMPfam_Connexin
AQR	9716	genome.wustl.edu	37	15	35155185	35155185	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014691.2	-1	validated	p.F1304	0.236	109	0%	98	33.7%	38	52.6%	-	-	-	NULL
AQR	9716	genome.wustl.edu	37	15	35193001	35193001	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014691.2	-1	validated	p.D689N	1.000	157	0%	269	27.1%	12	41.6%	possibly_damaging(0.68)	tolerated(0.19)	neutral(0.292)	NULL
ZNF770	54989	genome.wustl.edu	37	15	35274942	35274942	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014106.2	-1	validated	p.L232	1.000	103	0%	140	30%	2	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ATPBD4	89978	genome.wustl.edu	37	15	35747015	35747015	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080650.3	-1	validated	p.E107*	1.000	90	0%	98	34.7%	3	0%	-	-	-	HMMPfam_ATP_bind_4,superfamily_Adenine nucleotide alpha hydrolases-like
MEIS2	4212	genome.wustl.edu	37	15	37388589	37388589	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170675.2	-1	reviewed	p.C96	1.000	49	0%	71	35.2%	4	25%	-	-	-	NULL
SPRED1	161742	genome.wustl.edu	37	15	38631954	38631954	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152594.2	+1	reviewed	p.S147Y	1.000	227	0%	234	25.2%	5	60%	benign(0.002)	tolerated(1)	-	NULL
C15orf54	400360	genome.wustl.edu	37	15	39544621	39544621	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207445.2	+1	validated	p.Q95H	0.993	124	0%	89	38.2%	0	-	unknown(0)	-	-	NULL
C15orf54	400360	genome.wustl.edu	37	15	39544642	39544642	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207445.2	+1	validated	p.V102	0.961	137	0%	98	25.5%	0	-	-	-	-	NULL
THBS1	7057	genome.wustl.edu	37	15	39880883	39880883	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003246.2	+1	reviewed	p.K543T	1.000	124	0%	190	30%	125	0%	benign(0.241)	tolerated(0.41)	neutral(0.040)	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00179
FSIP1	161835	genome.wustl.edu	37	15	40018864	40018864	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152597.4	-1	validated	p.K326Q	0.863	209	0%	270	33.3%	1	0%	probably_damaging(0.98)	deleterious(0.04)	deleterious(0.773)	NULL
FSIP1	161835	genome.wustl.edu	37	15	40057895	40057895	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152597.4	-1	validated	p.K121N	1.000	345	0%	387	29.5%	0	-	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
DISP2	85455	genome.wustl.edu	37	15	40659608	40659608	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033510.1	+1	reviewed	p.S432F	1.000	40	0%	84	32.1%	2	50%	probably_damaging(0.996)	tolerated(0.7)	neutral(0.464)	superfamily_SSF82866
DISP2	85455	genome.wustl.edu	37	15	40661597	40661597	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033510.1	+1	reviewed	p.V1095A	1.000	33	0%	44	15.9%	1	0%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	superfamily_SSF82866
CHST14	113189	genome.wustl.edu	37	15	40764099	40764099	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130468.3	+1	reviewed	p.E229D	1.000	68	0%	77	29.9%	19	21%	probably_damaging(0.996)	tolerated(0.2)	deleterious(0.511)	HMMPfam_Sulfotransfer_2
CASC5	57082	genome.wustl.edu	37	15	40901081	40901081	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170589.3	+1	validated	p.R58*	0.983	94	0%	102	22.5%	0	-	-	-	-	NULL
CASC5	57082	genome.wustl.edu	37	15	40913043	40913043	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170589.3	+1	validated	p.R220I	0.002	52	0%	128	32%	0	-	possibly_damaging(0.924)	deleterious(0)	deleterious(0.818)	NULL
CASC5	57082	genome.wustl.edu	37	15	40917803	40917803	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170589.3	+1	validated	p.E1807*	0.042	46	0%	98	23.5%	0	-	-	-	-	NULL
CASC5	57082	genome.wustl.edu	37	15	40920847	40920847	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170589.3	+1	validated	p.D1878Y	0.995	116	0%	249	36.1%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CASC5	57082	genome.wustl.edu	37	15	40943743	40943743	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170589.3	+1	validated	p.R2122I	0.044	138	0%	231	29.9%	4	75%	possibly_damaging(0.951)	tolerated(0.07)	deleterious(0.713)	NULL
VPS18	57617	genome.wustl.edu	37	15	41191586	41191586	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020857.2	+1	reviewed	p.F190	1.000	49	0%	129	28.7%	27	59.2%	-	-	-	NULL
INO80	54617	genome.wustl.edu	37	15	41364122	41364122	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017553.1	-1	reviewed	p.Q510	1.000	62	0%	122	45.1%	7	28.5%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
EXD1	161829	genome.wustl.edu	37	15	41488141	41488141	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152596.2	-1	provisional	p.R152I	0.998	107	0%	209	37.3%	0	-	possibly_damaging(0.948)	deleterious(0.05)	deleterious(0.736)	HMMPfam_3_5_exonuc,HMMSmart_SM00474,superfamily_Ribonuclease H-like
EXD1	161829	genome.wustl.edu	37	15	41488226	41488226	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152596.2	-1	provisional	p.N124H	0.975	57	0%	116	32.8%	0	-	probably_damaging(0.976)	tolerated(0.1)	deleterious(0.704)	HMMPfam_3_5_exonuc,HMMSmart_SM00474,superfamily_Ribonuclease H-like
NDUFAF1	51103	genome.wustl.edu	37	15	41688722	41688722	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016013.2	-1	validated	p.R179Q	0.062	65	0%	159	29.6%	29	41.3%	benign(0.006)	tolerated(0.16)	neutral(0.059)	HMMPfam_CIA30
RTF1	23168	genome.wustl.edu	37	15	41750031	41750031	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015138.4	+1	validated	p.E207*	1.000	134	0%	318	36.8%	10	20%	-	-	-	NULL
TYRO3	7301	genome.wustl.edu	37	15	41862335	41862335	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006293.3	+1	reviewed	p.R455W	1.000	88	0%	147	27.9%	13	38.4%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
MGA	23269	genome.wustl.edu	37	15	41961356	41961356	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080541.2	+1	validated	p.F88L	1.000	112	0%	300	33.7%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_T-box,HMMSmart_SM00425,superfamily_p53-like transcription factors
MGA	23269	genome.wustl.edu	37	15	42041074	42041074	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080541.2	+1	validated	p.R1867*	1.000	162	0%	269	30.9%	9	44.4%	-	-	-	NULL
MGA	23269	genome.wustl.edu	37	15	42054042	42054042	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080541.2	+1	validated	p.L2551I	1.000	80	0%	141	36.2%	5	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
JMJD7-PLA2G4B	8681	genome.wustl.edu	37	15	42131057	42131057	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_015346.1	+1	validated	NULL	0.322	103	0%	120	34.2%	6	33.3%	-	-	-	-
SPTBN5	51332	genome.wustl.edu	37	15	42142150	42142150	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016642.2	-1	validated	p.S3608R	0.001	130	0%	149	29.5%	8	50%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	HMMSmart_SM00233,superfamily_PH domain-like
SPTBN5	51332	genome.wustl.edu	37	15	42144859	42144859	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016642.2	-1	validated	p.E3439D	0.901	68	0%	101	27.7%	3	66.6%	probably_damaging(0.966)	tolerated(0.12)	deleterious(0.668)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SPTBN5	51332	genome.wustl.edu	37	15	42145091	42145091	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016642.2	-1	validated	p.R3391	0.003	31	0%	26	23.1%	5	0%	-	-	-	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
EHD4	30844	genome.wustl.edu	37	15	42193020	42193020	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139265.3	-1	validated	p.V483	0.929	53	0%	72	33.3%	43	34.8%	-	-	-	HMMSmart_EH,superfamily_SSF47473
EHD4	30844	genome.wustl.edu	37	15	42193112	42193112	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139265.3	-1	validated	p.E453K	1.000	58	0%	90	22.2%	46	26%	probably_damaging(0.987)	tolerated(0.51)	neutral(0.446)	HMMSmart_EH,superfamily_SSF47473
PLA2G4D	283748	genome.wustl.edu	37	15	42364579	42364579	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178034.3	-1	validated	p.Q443H	0.987	109	0%	154	28.6%	0	-	benign(0.001)	tolerated(0.61)	neutral(0.004)	HMMPfam_PLA2_B,HMMSmart_SM00022,superfamily_FabD/lysophospholipase-like
VPS39	23339	genome.wustl.edu	37	15	42458405	42458405	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015289.2	-1	reviewed	p.F544L	1.000	146	0%	230	36.1%	23	34.7%	benign(0.067)	tolerated(0.33)	neutral(0.029)	HMMPfam_Vps39_1
VPS39	23339	genome.wustl.edu	37	15	42459701	42459701	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015289.2	-1	reviewed	p.S423F	1.000	467	0%	796	35.3%	29	31%	possibly_damaging(0.885)	deleterious(0.02)	deleterious(0.729)	NULL
TMEM87A	25963	genome.wustl.edu	37	15	42520982	42520982	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015497.3	-1	validated	p.K390Q	1.000	187	0%	317	36.3%	28	10.7%	probably_damaging(0.974)	deleterious(0.01)	deleterious(0.822)	HMMPfam_Lung_7-TM_R
CAPN3	825	genome.wustl.edu	37	15	42652223	42652223	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000070.2	+1	reviewed	p.L74I	1.000	81	0%	107	32.7%	0	-	benign(0.152)	deleterious(0.01)	neutral(0.419)	HMMPfam_Peptidase_C2,HMMSmart_SM00230,superfamily_Cysteine proteinases
CAPN3	825	genome.wustl.edu	37	15	42680042	42680042	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000070.2	+1	reviewed	p.R197H	1.000	239	0%	549	32.4%	0	-	probably_damaging(0.973)	tolerated(0.22)	neutral(0.457)	HMMPfam_Peptidase_C2,HMMSmart_SM00230,superfamily_Cysteine proteinases
ZFP106	64397	genome.wustl.edu	37	15	42714150	42714150	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022473.1	-1	provisional	p.D1781Y	1.000	230	0%	288	28.8%	8	25%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
ZFP106	64397	genome.wustl.edu	37	15	42729447	42729447	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022473.1	-1	provisional	p.R1554W	0.182	203	0%	347	38%	4	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
ZFP106	64397	genome.wustl.edu	37	15	42742347	42742347	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022473.1	-1	provisional	p.S685Y	0.973	155	0%	222	28.8%	2	50%	probably_damaging(0.956)	deleterious(0)	deleterious(0.844)	NULL
ZFP106	64397	genome.wustl.edu	37	15	42742931	42742931	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022473.1	-1	provisional	p.S490	0.000	288	0%	471	35.2%	2	50%	-	-	-	NULL
STARD9	57519	genome.wustl.edu	37	15	42976811	42976811	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001129482.3	+1	model	p.P964L	0.000	92	0%	136	31.6%	0	-	benign(0.006)	-	-	NULL
STARD9	57519	genome.wustl.edu	37	15	42979288	42979288	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001129482.3	+1	model	p.N1752Y	0.054	104	0%	142	30.3%	0	-	probably_damaging(0.999)	-	-	NULL
STARD9	57519	genome.wustl.edu	37	15	42980737	42980737	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001129482.3	+1	model	p.E2235*	0.000	95	0%	190	30.5%	0	-	-	-	-	NULL
STARD9	57519	genome.wustl.edu	37	15	42983777	42983777	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001129482.3	+1	model	p.S3248Y	1.000	160	0%	276	36.2%	0	-	probably_damaging(0.981)	-	-	NULL
STARD9	57519	genome.wustl.edu	37	15	42985591	42985591	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001129482.3	+1	model	p.D3853N	0.009	88	0%	144	25%	0	-	probably_damaging(0.992)	-	-	NULL
STARD9	57519	genome.wustl.edu	37	15	42985803	42985803	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001129482.3	+1	model	p.I3923	0.000	79	0%	127	35.4%	1	100%	-	-	-	NULL
CDAN1	146059	genome.wustl.edu	37	15	43016775	43016775	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138477.2	-1	reviewed	p.L1200I	0.818	121	0%	129	34.9%	20	65%	benign(0.029)	tolerated(0.12)	neutral(0.262)	NULL
LOC100289126	100289126	genome.wustl.edu	37	15	43023108	43023108	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343340.1	+1	model	p.P32T	0.005	69	0%	85	34.1%	0	-	-	-	-	NULL
TTBK2	146057	genome.wustl.edu	37	15	43044464	43044464	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173500.3	-1	reviewed	p.D994N	1.000	117	0%	204	22.1%	1	0%	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	NULL
TTBK2	146057	genome.wustl.edu	37	15	43067786	43067786	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173500.3	-1	reviewed	p.A515	0.997	101	0%	151	29.1%	2	50%	-	-	-	NULL
TMEM62	80021	genome.wustl.edu	37	15	43476552	43476552	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024956.3	+1	provisional	p.R567I	1.000	212	0%	414	33.8%	12	0%	benign(0.005)	tolerated(0.2)	neutral(0.049)	NULL
CCNDBP1	23582	genome.wustl.edu	37	15	43483761	43483761	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012142.3	+1	reviewed	p.A250T	1.000	116	0%	175	32.6%	39	38.4%	probably_damaging(0.989)	tolerated(0.23)	deleterious(0.481)	NULL
EPB42	2038	genome.wustl.edu	37	15	43495432	43495432	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000119.2	-1	reviewed	p.R584*	0.006	309	0.3%	642	32.7%	0	-	-	-	-	HMMPfam_Transglut_C,superfamily_Transglut_C
LCMT2	9836	genome.wustl.edu	37	15	43621335	43621335	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014793.3	-1	reviewed	p.F451L	0.000	63	0%	119	34.5%	16	62.5%	benign(0)	tolerated(0.61)	neutral(0.004)	NULL
LCMT2	9836	genome.wustl.edu	37	15	43621476	43621476	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014793.3	-1	reviewed	p.Q404H	0.000	111	0%	178	37.1%	19	42.1%	benign(0)	tolerated(0.31)	neutral(0.027)	NULL
ADAL	161823	genome.wustl.edu	37	15	43643138	43643138	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000422466	+1	known	e9-1	1.000	276	0%	452	33.8%	0	-	-	-	-	-
TUBGCP4	27229	genome.wustl.edu	37	15	43672346	43672346	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014444.2	+1	provisional	p.R169Q	1.000	149	0%	346	36.1%	3	66.6%	possibly_damaging(0.435)	tolerated(0.92)	neutral(0.142)	HMMPfam_Spc97_Spc98
TP53BP1	7158	genome.wustl.edu	37	15	43707863	43707863	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001141980.1	-1	validated	p.R1673I	1.000	126	0%	225	33.3%	53	39.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_BRCT
TP53BP1	7158	genome.wustl.edu	37	15	43708548	43708548	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001141980.1	-1	validated	p.R1583I	1.000	192	0%	337	33.2%	63	47.6%	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	HMMPfam_53-BP1_Tudor,superfamily_SSF63748
MAP1A	4130	genome.wustl.edu	37	15	43814483	43814483	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002373.5	+1	reviewed	p.A271D	1.000	65	0%	147	28.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MAP1A	4130	genome.wustl.edu	37	15	43814848	43814848	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002373.5	+1	reviewed	p.R393*	1.000	102	0%	239	36%	0	-	-	-	-	NULL
MAP1A	4130	genome.wustl.edu	37	15	43815090	43815090	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002373.5	+1	reviewed	p.K473N	1.000	64	0%	143	30.8%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
MAP1A	4130	genome.wustl.edu	37	15	43816974	43816974	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002373.5	+1	reviewed	p.E1101D	0.999	47	0%	68	30.9%	0	-	benign(0.098)	deleterious(0.01)	neutral(0.413)	NULL
MAP1A	4130	genome.wustl.edu	37	15	43819697	43819697	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002373.5	+1	reviewed	p.R2009Q	0.030	40	0%	42	40.5%	5	20%	possibly_damaging(0.935)	tolerated(0.1)	deleterious(0.667)	NULL
STRC	161497	genome.wustl.edu	37	15	43902547	43902547	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153700.2	-1	reviewed	p.R1154Q	0.997	455	0%	769	17.8%	0	-	possibly_damaging(0.889)	tolerated(0.12)	deleterious(0.610)	NULL
STRC	161497	genome.wustl.edu	37	15	43992637	43992637	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000381686	-1	known	p.L1633M	0.999	58	0%	97	27.8%	0	-	-	-	-	NULL
PDIA3	2923	genome.wustl.edu	37	15	44060688	44060688	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005313.4	+1	reviewed	p.R344C	1.000	158	0%	275	35.6%	1511	44.5%	probably_damaging(0.997)	tolerated(0.1)	deleterious(0.752)	NULL
PDIA3	2923	genome.wustl.edu	37	15	44061730	44061730	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005313.4	+1	reviewed	p.E384D	1.000	327	0%	625	29.8%	579	36.7%	benign(0.007)	tolerated(0.1)	neutral(0.286)	superfamily_Thioredoxin-like,HMMPfam_Thioredoxin
MFAP1	4236	genome.wustl.edu	37	15	44106703	44106703	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005926.2	-1	validated	p.R205*	1.000	171	0%	330	31.5%	28	3.5%	-	-	-	HMMPfam_MFAP1_C
WDR76	79968	genome.wustl.edu	37	15	44134637	44134637	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024908.3	+1	validated	p.E253*	1.000	98	0%	162	24.1%	1	0%	-	-	-	NULL
FRMD5	84978	genome.wustl.edu	37	15	44184264	44184264	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032892.3	-1	validated	p.V215M	1.000	159	0%	276	33.3%	7	28.5%	probably_damaging(0.992)	tolerated(0.11)	deleterious(0.719)	HMMPfam_FERM_C,superfamily_PH domain-like
SPG11	80208	genome.wustl.edu	37	15	44876400	44876400	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025137.3	-1	reviewed	p.I1826	0.001	173	0%	279	31.2%	4	50%	-	-	-	NULL
SPG11	80208	genome.wustl.edu	37	15	44890524	44890524	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025137.3	-1	reviewed	p.E1314*	1.000	206	0%	286	33.2%	1	0%	-	-	-	NULL
SPG11	80208	genome.wustl.edu	37	15	44914928	44914928	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025137.3	-1	reviewed	p.L772	0.973	114	0%	176	35.8%	0	-	-	-	-	NULL
SPG11	80208	genome.wustl.edu	37	15	44921487	44921487	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025137.3	-1	reviewed	p.N612I	0.986	215	0%	367	29.7%	5	60%	probably_damaging(0.967)	deleterious(0.04)	deleterious(0.758)	NULL
SPG11	80208	genome.wustl.edu	37	15	44943897	44943897	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025137.3	-1	reviewed	p.M416I	0.478	180	0.6%	395	30.4%	10	50%	benign(0.007)	tolerated(0.18)	neutral(0.056)	NULL
B2M	567	genome.wustl.edu	37	15	45008529	45008529	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004048.2	+1	reviewed	p.R117*	0.003	448	0%	602	59.1%	2158	15.8%	-	-	-	superfamily_Immunoglobulin
TRIM69	140691	genome.wustl.edu	37	15	45047138	45047138	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182985.3	+1	reviewed	p.Y16C	0.001	101	0%	187	30.5%	0	-	possibly_damaging(0.793)	deleterious(0)	deleterious(0.742)	NULL
TRIM69	140691	genome.wustl.edu	37	15	45048627	45048627	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182985.3	+1	reviewed	p.R182M	0.001	82	0%	111	31.5%	0	-	benign(0.296)	tolerated(0.05)	neutral(0.437)	NULL
C15orf43	145645	genome.wustl.edu	37	15	45253745	45253745	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152448.1	+1	predicted	p.F104C	1.000	102	0%	172	30.2%	0	-	benign(0.163)	deleterious(0.02)	neutral(0.398)	NULL
DUOX2	50506	genome.wustl.edu	37	15	45396204	45396204	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014080.4	-1	reviewed	p.D870Y	1.000	246	0%	440	21.6%	0	-	benign(0.081)	deleterious(0)	neutral(0.451)	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand
DUOX1	53905	genome.wustl.edu	37	15	45428767	45428767	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017434.3	+1	reviewed	p.F322	0.971	167	0%	207	32.4%	0	-	-	-	-	HMMPfam_An_peroxidase,superfamily_Heme-dependent peroxidases
DUOX1	53905	genome.wustl.edu	37	15	45437251	45437251	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017434.3	+1	reviewed	p.E765D	1.000	73	0%	117	36.8%	2	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
SPATA5L1	79029	genome.wustl.edu	37	15	45697549	45697549	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024063.2	+1	validated	p.R374I	0.998	113	0%	167	26.3%	6	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_AAA,superfamily_P-loop containing nucleoside triphosphate hydrolases
SPATA5L1	79029	genome.wustl.edu	37	15	45702643	45702643	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024063.2	+1	validated	p.R450Q	1.000	198	0%	349	28.7%	20	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
HMGN2P46	283651	genome.wustl.edu	37	15	45847729	45847729	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000313559	+1	known	p.L27I	0.064	73	0%	138	29.7%	0	-	-	-	-	NULL
SEMA6D	80031	genome.wustl.edu	37	15	48056905	48056905	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153618.1	+1	reviewed	p.L390M	0.997	148	0%	132	34.8%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Sema,HMMSmart_SM00630,superfamily_Sema domain
SEMA6D	80031	genome.wustl.edu	37	15	48063054	48063054	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153618.1	+1	reviewed	p.P765L	1.000	76	0%	66	43.9%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
SEMA6D	80031	genome.wustl.edu	37	15	48063545	48063545	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153618.1	+1	reviewed	p.L929I	0.263	87	0%	87	20.7%	0	-	probably_damaging(0.998)	tolerated(0.05)	deleterious(0.820)	NULL
SEMA6D	80031	genome.wustl.edu	37	15	48063939	48063939	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153618.1	+1	reviewed	p.P1060H	1.000	22	0%	20	25%	0	-	possibly_damaging(0.939)	deleterious(0)	deleterious(0.829)	NULL
MYEF2	50804	genome.wustl.edu	37	15	48460932	48460932	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016132.3	-1	validated	p.S89L	0.915	460	0%	428	34.1%	6	50%	benign(0.103)	deleterious(0.04)	neutral(0.357)	NULL
SLC12A1	6557	genome.wustl.edu	37	15	48539535	48539535	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000338.2	+1	reviewed	p.A521D	1.000	255	0%	296	26.4%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_AA_permease
FBN1	2200	genome.wustl.edu	37	15	48703546	48703546	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000138.4	-1	reviewed	p.L2753I	1.000	118	0%	126	36.5%	20	0%	probably_damaging(0.998)	tolerated(0.11)	deleterious(0.746)	superfamily_Concanavalin A-like lectins/glucanases
FBN1	2200	genome.wustl.edu	37	15	48729257	48729257	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000138.4	-1	reviewed	p.E2133*	1.000	213	0%	161	36%	8	12.5%	-	-	-	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
FBN1	2200	genome.wustl.edu	37	15	48737634	48737634	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000138.4	-1	reviewed	p.G1952	0.952	231	0%	166	33.7%	7	0%	-	-	-	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
FBN1	2200	genome.wustl.edu	37	15	48762861	48762861	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000138.4	-1	reviewed	p.E1477K	1.000	170	0%	158	32.9%	3	0%	probably_damaging(0.999)	tolerated(0.21)	deleterious(0.534)	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_EGF/Laminin
FBN1	2200	genome.wustl.edu	37	15	48764854	48764854	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000138.4	-1	reviewed	p.E1410D	1.000	93	0%	111	27.9%	5	0%	possibly_damaging(0.543)	tolerated(0.3)	neutral(0.212)	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
FBN1	2200	genome.wustl.edu	37	15	48766774	48766774	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000138.4	-1	reviewed	p.F1346L	1.000	219	0%	233	30.5%	4	0%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
FBN1	2200	genome.wustl.edu	37	15	48777579	48777579	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000138.4	-1	reviewed	p.S1235*	1.000	102	0%	107	34.6%	4	0%	-	-	-	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_2,HMMPfam_EGF_CA,superfamily_EGF/Laminin
FBN1	2200	genome.wustl.edu	37	15	48786409	48786409	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000138.4	-1	reviewed	p.Q907P	0.747	392	0%	372	31.2%	2	0%	benign(0.002)	tolerated(0.19)	neutral(0.050)	superfamily_TB module/8-cys domain,superfamily_Concanavalin A-like lectins/glucanases
FBN1	2200	genome.wustl.edu	37	15	48791184	48791184	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000138.4	-1	reviewed	p.S722N	0.964	199	0%	248	33.5%	3	0%	benign(0)	tolerated(0.51)	neutral(0.009)	superfamily_TB module/8-cys domain,superfamily_Concanavalin A-like lectins/glucanases
CEP152	22995	genome.wustl.edu	37	15	49037166	49037166	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014985.2	-1	provisional	p.E1164*	1.000	251	0%	189	31.2%	0	-	-	-	-	NULL
CEP152	22995	genome.wustl.edu	37	15	49059550	49059550	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014985.2	-1	provisional	p.R710I	0.061	229	0%	274	33.9%	2	100%	benign(0.059)	tolerated(0.17)	neutral(0.063)	NULL
SECISBP2L	9728	genome.wustl.edu	37	15	49304035	49304035	+	Missense_Mutation	SNP	T	T	G	rs113430830		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014701.2	-1	provisional	p.K541T	1.000	213	0%	314	38.9%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
FGF7	2252	genome.wustl.edu	37	15	49716655	49716655	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002009.3	+1	reviewed	p.R54I	1.000	176	0%	217	26.3%	6	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
C15orf33	196951	genome.wustl.edu	37	15	49833942	49833942	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152647.2	-1	validated	p.S270L	0.993	82	0%	49	20.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
DTWD1	56986	genome.wustl.edu	37	15	49926787	49926787	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144955.1	+1	validated	p.H155N	0.878	54	0%	41	26.8%	13	38.4%	benign(0.344)	tolerated(0.49)	neutral(0.119)	HMMPfam_DTW
DTWD1	56986	genome.wustl.edu	37	15	49935689	49935689	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144955.1	+1	validated	p.L277I	1.000	65	0%	33	24.2%	22	45.4%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_DTW
ATP8B4	79895	genome.wustl.edu	37	15	50189573	50189573	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024837.2	-1	validated	p.K871N	0.998	66	0%	56	30.4%	0	-	benign(0.341)	deleterious(0.01)	deleterious(0.513)	superfamily_SSF81665
ATP8B4	79895	genome.wustl.edu	37	15	50264973	50264973	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024837.2	-1	validated	p.R350H	1.000	123	0%	108	30.6%	0	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_E1-E2_ATPase,superfamily_SSF81665
HDC	3067	genome.wustl.edu	37	15	50534755	50534755	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002112.2	-1	validated	p.K564R	1.000	92	0%	131	32.1%	0	-	benign(0.002)	deleterious(0)	neutral(0.445)	NULL
GABPB1	2553	genome.wustl.edu	37	15	50601928	50601928	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005254.5	-1	reviewed	p.R23H	1.000	147	0%	284	30.3%	11	54.5%	benign(0.025)	deleterious(0.03)	neutral(0.365)	superfamily_Ankyrin repeat
USP8	9101	genome.wustl.edu	37	15	50731298	50731298	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128610.1	+1	validated	p.E10*	1.000	114	0%	162	30.2%	0	-	-	-	-	HMMPfam_DUF1873
TRPM7	54822	genome.wustl.edu	37	15	50853903	50853903	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017672.4	-1	reviewed	p.S1857*	0.998	92	0%	95	29.5%	12	58.3%	-	-	-	NULL
TRPM7	54822	genome.wustl.edu	37	15	50897263	50897263	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017672.4	-1	reviewed	p.I930L	1.000	96	0%	172	33.7%	3	66.6%	benign(0.001)	tolerated(0.82)	neutral(0.001)	HMMPfam_Ion_trans
AP4E1	23431	genome.wustl.edu	37	15	51276221	51276221	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007347.3	+1	validated	p.L657I	1.000	266	0%	267	30.7%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
AP4E1	23431	genome.wustl.edu	37	15	51285597	51285597	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007347.3	+1	validated	p.K707N	1.000	140	0%	183	30.1%	1	0%	probably_damaging(0.992)	deleterious(0.01)	deleterious(0.853)	NULL
AP4E1	23431	genome.wustl.edu	37	15	51285681	51285681	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007347.3	+1	validated	p.E735D	0.688	152	0%	232	34.1%	2	50%	benign(0)	tolerated(0.47)	neutral(0.011)	NULL
AP4E1	23431	genome.wustl.edu	37	15	51291449	51291449	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007347.3	+1	validated	p.D1029Y	1.000	205	0%	196	36.7%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Coatamer_beta_C
CYP19A1	1588	genome.wustl.edu	37	15	51510779	51510779	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000103.3	-1	reviewed	p.F234L	1.000	218	0%	198	31.3%	0	-	probably_damaging(0.999)	tolerated(0.19)	deleterious(0.540)	HMMPfam_p450,superfamily_Cytochrome_P450
DMXL2	23312	genome.wustl.edu	37	15	51748267	51748267	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015263.3	-1	validated	p.N2819S	1.000	104	0%	89	36%	11	9%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	HMMSmart_SM00320,superfamily_WD40 repeat-like
DMXL2	23312	genome.wustl.edu	37	15	51766643	51766643	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015263.3	-1	validated	p.R2370W	1.000	147	0%	158	30.4%	1	0%	unknown(0)	deleterious(0)	-	superfamily_WD40 repeat-like
DMXL2	23312	genome.wustl.edu	37	15	51790926	51790926	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015263.3	-1	validated	p.S1499A	1.000	231	0%	295	37.3%	0	-	benign(0.135)	tolerated(0.07)	neutral(0.331)	NULL
DMXL2	23312	genome.wustl.edu	37	15	51795105	51795105	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015263.3	-1	validated	p.L964I	0.997	180	0%	202	28.2%	2	0%	probably_damaging(1)	tolerated(0.34)	deleterious(0.523)	NULL
DMXL2	23312	genome.wustl.edu	37	15	51834653	51834653	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015263.3	-1	validated	p.L328I	1.000	229	0%	185	41.6%	0	-	probably_damaging(0.999)	tolerated(0.38)	deleterious(0.508)	superfamily_WD40 repeat-like
DMXL2	23312	genome.wustl.edu	37	15	51856380	51856380	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015263.3	-1	validated	p.E148*	1.000	126	0%	153	37.3%	1	0%	-	-	-	superfamily_WD40 repeat-like
MAPK6	5597	genome.wustl.edu	37	15	52338710	52338710	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002748.3	+1	reviewed	p.S18Y	1.000	264	0%	410	32.7%	3	66.6%	possibly_damaging(0.76)	deleterious(0)	deleterious(0.726)	superfamily_Kinase_like
MAPK6	5597	genome.wustl.edu	37	15	52356958	52356958	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002748.3	+1	reviewed	p.E643*	1.000	98	0%	140	25%	47	40.4%	-	-	-	NULL
BCL2L10	10017	genome.wustl.edu	37	15	52404510	52404510	+	Silent	SNP	G	G	A	rs79743288		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020396.2	-1	reviewed	p.C138	0.012	6	0.000	8	0.625	0	-	-	-	-	HMMSmart_SM00337,superfamily_Bcl-2 inhibitors of programmed cell death
BCL2L10	10017	genome.wustl.edu	37	15	52404732	52404732	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020396.2	-1	reviewed	p.F64L	0.001	16	0%	10	50%	0	-	possibly_damaging(0.892)	tolerated(0.4)	neutral(0.367)	HMMPfam_Bcl-2,HMMSmart_SM00337,superfamily_Bcl-2 inhibitors of programmed cell death
MYO5C	55930	genome.wustl.edu	37	15	52486108	52486108	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018728.2	-1	validated	p.N1740	0.064	153	0%	304	35.9%	13	69.2%	-	-	-	NULL
MYO5C	55930	genome.wustl.edu	37	15	52538197	52538197	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018728.2	-1	validated	p.G674	0.001	110	0%	180	11.7%	5	20%	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO5C	55930	genome.wustl.edu	37	15	52545594	52545594	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018728.2	-1	validated	p.D486Y	1.000	279	0%	390	31%	10	40%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO5C	55930	genome.wustl.edu	37	15	52553246	52553246	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018728.2	-1	validated	p.R376C	1.000	103	0%	101	37.6%	5	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO5C	55930	genome.wustl.edu	37	15	52556428	52556428	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018728.2	-1	validated	p.V336M	0.996	151	0%	287	37.3%	8	25%	possibly_damaging(0.59)	deleterious(0)	deleterious(0.648)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
ARPP19	10776	genome.wustl.edu	37	15	52844162	52844162	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006628.4	-1	validated	p.P103L	1.000	216	0%	364	33.5%	68	63.2%	benign(0.395)	deleterious(0.05)	deleterious(0.472)	NULL
FAM214A	56204	genome.wustl.edu	37	15	52885910	52885910	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019600.2	-1	validated	p.F891	1.000	56	0%	79	34.2%	23	26%	-	-	-	NULL
FAM214A	56204	genome.wustl.edu	37	15	52900939	52900939	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019600.2	-1	validated	p.E724	1.000	352	0%	520	28.5%	8	62.5%	-	-	-	NULL
WDR72	256764	genome.wustl.edu	37	15	53901776	53901776	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182758.2	-1	validated	p.S962	0.000	170	0%	127	31.5%	1	0%	-	-	-	NULL
WDR72	256764	genome.wustl.edu	37	15	53905952	53905952	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182758.2	-1	validated	p.S928Y	0.979	167	0%	58	34.5%	0	-	benign(0.273)	deleterious(0.04)	neutral(0.378)	NULL
WDR72	256764	genome.wustl.edu	37	15	53907917	53907917	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182758.2	-1	validated	p.S829Y	1.000	104	0%	64	20.3%	0	-	probably_damaging(0.991)	tolerated(0.1)	deleterious(0.730)	NULL
WDR72	256764	genome.wustl.edu	37	15	53994475	53994475	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182758.2	-1	validated	p.S475	0.786	147	0%	244	32%	0	-	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
WDR72	256764	genome.wustl.edu	37	15	54005074	54005074	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182758.2	-1	validated	p.V202	1.000	168	0%	180	25.6%	1	0%	-	-	-	superfamily_WD40 repeat-like
UNC13C	440279	genome.wustl.edu	37	15	54305625	54305625	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080534.1	+1	provisional	p.G175	1.000	105	0%	114	22.8%	0	-	-	-	-	NULL
UNC13C	440279	genome.wustl.edu	37	15	54305648	54305648	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080534.1	+1	provisional	p.K183T	1.000	89	0%	110	42.7%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
UNC13C	440279	genome.wustl.edu	37	15	54838954	54838954	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080534.1	+1	provisional	p.V1911I	1.000	75	0%	67	25.4%	0	-	possibly_damaging(0.729)	deleterious(0.04)	deleterious(0.615)	HMMPfam_Membr_traf_MHD
UNC13C	440279	genome.wustl.edu	37	15	54919045	54919045	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080534.1	+1	provisional	p.R2127*	0.989	120	0%	83	28.9%	1	0%	-	-	-	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
PIGB	9488	genome.wustl.edu	37	15	55626105	55626105	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004855.4	+1	reviewed	p.R232C	1.000	172	0%	323	33.4%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_transf_22
PIGB	9488	genome.wustl.edu	37	15	55647027	55647027	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004855.4	+1	reviewed	p.L457I	1.000	172	0%	289	24.2%	11	9%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
DYX1C1	161582	genome.wustl.edu	37	15	55731699	55731699	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130810.2	-1	reviewed	p.K288N	1.000	177	0%	295	34.9%	6	83.3%	probably_damaging(0.981)	deleterious(0.05)	deleterious(0.771)	superfamily_TPR-like
PYGO1	26108	genome.wustl.edu	37	15	55838847	55838847	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015617.1	-1	provisional	p.F212V	0.995	95	0%	128	37.5%	0	-	possibly_damaging(0.832)	tolerated(0.07)	deleterious(0.636)	NULL
PRTG	283659	genome.wustl.edu	37	15	55965865	55965865	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173814.4	-1	validated	p.R519K	1.000	86	0%	117	31.6%	2	0%	probably_damaging(0.996)	tolerated(0.82)	neutral(0.462)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
NEDD4	4734	genome.wustl.edu	37	15	56132662	56132662	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198400.2	-1	validated	p.H1019N	1.000	170	0%	289	29.4%	2	0%	benign(0.001)	tolerated(0.35)	neutral(0.021)	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT
RFX7	64864	genome.wustl.edu	37	15	56386803	56386803	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022841.5	-1	validated	p.V1041	0.999	261	0%	292	36%	6	33.3%	-	-	-	NULL
MNS1	55329	genome.wustl.edu	37	15	56756404	56756404	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018365.2	-1	reviewed	p.Q15H	1.000	231	0%	240	24.6%	4	25%	possibly_damaging(0.822)	deleterious(0)	deleterious(0.756)	NULL
ZNF280D	54816	genome.wustl.edu	37	15	56923707	56923707	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017661.2	-1	validated	p.E977*	0.989	171	0%	255	34.1%	4	50%	-	-	-	NULL
ZNF280D	54816	genome.wustl.edu	37	15	56924061	56924061	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017661.2	-1	validated	p.N859H	0.699	361	0%	575	34.4%	5	20%	possibly_damaging(0.437)	deleterious(0.01)	deleterious(0.548)	NULL
ZNF280D	54816	genome.wustl.edu	37	15	56935196	56935196	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017661.2	-1	validated	e18-1	1.000	103	0%	45	22.2%	1	0%	-	-	-	-
ZNF280D	54816	genome.wustl.edu	37	15	56961070	56961070	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017661.2	-1	validated	p.R499Q	1.000	372	0%	240	25%	3	0%	possibly_damaging(0.702)	tolerated(0.3)	neutral(0.281)	NULL
CGNL1	84952	genome.wustl.edu	37	15	57730575	57730575	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032866.3	+1	validated	p.K126N	0.997	38	0%	34	32.4%	1	0%	possibly_damaging(0.44)	tolerated(0.06)	neutral(0.466)	NULL
CGNL1	84952	genome.wustl.edu	37	15	57734600	57734600	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032866.3	+1	validated	p.R576M	1.000	185	0%	256	30.5%	5	60%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
GCOM1	145781	genome.wustl.edu	37	15	57953689	57953689	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001018090.1	+1	reviewed	p.L387F	0.516	165	0%	133	30.8%	0	-	benign(0.001)	tolerated(0.31)	neutral(0.027)	NULL
POLR2M	81488	genome.wustl.edu	37	15	58001131	58001131	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015532.3	+1	reviewed	p.L111	0.507	149	0%	215	36.3%	6	50%	-	-	-	NULL
ALDH1A2	8854	genome.wustl.edu	37	15	58253043	58253043	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003888.2	-1	reviewed	e12-1	1.000	238	0%	203	33.5%	0	-	-	-	-	-
ALDH1A2	8854	genome.wustl.edu	37	15	58254351	58254351	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003888.2	-1	reviewed	p.K370N	1.000	131	0%	123	26%	9	11.1%	possibly_damaging(0.543)	deleterious(0)	deleterious(0.629)	HMMPfam_Aldedh,superfamily_ALDH-like
ALDH1A2	8854	genome.wustl.edu	37	15	58287313	58287313	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003888.2	-1	reviewed	p.R173K	1.000	114	0%	106	31.1%	7	0%	benign(0.001)	tolerated(0.1)	neutral(0.286)	HMMPfam_Aldedh,superfamily_ALDH-like
ALDH1A2	8854	genome.wustl.edu	37	15	58302897	58302897	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003888.2	-1	reviewed	p.R148Q	1.000	191	0%	189	39.7%	11	0%	possibly_damaging(0.867)	deleterious(0.03)	deleterious(0.701)	HMMPfam_Aldedh,superfamily_ALDH-like
AQP9	366	genome.wustl.edu	37	15	58430854	58430854	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020980.3	+1	reviewed	p.F30L	1.000	196	0%	287	25.4%	0	-	benign(0.024)	tolerated(0.76)	neutral(0.002)	HMMPfam_MIP,superfamily_Aquaporin-like
LIPC	3990	genome.wustl.edu	37	15	58724279	58724279	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000236.2	+1	reviewed	p.I16	0.566	202	0%	263	29.3%	0	-	-	-	-	superfamily_alpha/beta-Hydrolases
LIPC	3990	genome.wustl.edu	37	15	58840680	58840680	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000236.2	+1	reviewed	p.R320	0.992	30	0%	30	40%	0	-	-	-	-	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases
HSP90AB4P	664618	genome.wustl.edu	37	15	58984317	58984317	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000380522	-1	known	p.F316L	1.000	10	0%	12	41.7%	0	-	-	-	-	superfamily_Ribosomal_S5_D2-typ_fold,HMMPfam_HSP90
HSP90AB4P	664618	genome.wustl.edu	37	15	58984494	58984494	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000380522	-1	known	p.F277L	1.000	44	0%	82	39%	0	-	-	-	-	superfamily_Ribosomal_S5_D2-typ_fold,HMMPfam_HSP90
HSP90AB4P	664618	genome.wustl.edu	37	15	58984707	58984707	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000380522	-1	known	p.E206D	1.000	28	0%	93	34.4%	1	0%	-	-	-	HMMPfam_HSP90
SLTM	79811	genome.wustl.edu	37	15	59186051	59186051	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024755.2	-1	validated	p.S539	0.000	402	0%	571	35.9%	15	33.3%	-	-	-	NULL
RNF111	54778	genome.wustl.edu	37	15	59344571	59344571	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017610.6	+1	reviewed	p.E316D	1.000	166	0%	266	37.2%	2	100%	probably_damaging(0.975)	deleterious(0)	deleterious(0.861)	NULL
RNF111	54778	genome.wustl.edu	37	15	59376433	59376433	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017610.6	+1	reviewed	p.Q801	1.000	111	0%	128	31.2%	7	28.5%	-	-	-	NULL
CCNB2	9133	genome.wustl.edu	37	15	59409033	59409033	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004701.2	+1	reviewed	p.E248*	1.000	187	0%	289	32.9%	23	0%	-	-	-	HMMSmart_SM00385,HMMPfam_Cyclin_N,superfamily_Cyclin-like
LDHAL6B	92483	genome.wustl.edu	37	15	59499603	59499603	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033195.1	+1	provisional	p.R155H	1.000	147	0%	296	30.4%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Ldh_1_N,superfamily_NAD(P)-bd
FAM81A	145773	genome.wustl.edu	37	15	59752403	59752403	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152450.2	+1	validated	p.E98K	0.995	112	0%	183	28.4%	2	50%	possibly_damaging(0.664)	deleterious(0.02)	deleterious(0.618)	NULL
FAM81A	145773	genome.wustl.edu	37	15	59799463	59799463	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152450.2	+1	validated	p.E155D	1.000	85	0%	142	26.8%	1	0%	possibly_damaging(0.942)	tolerated(0.21)	neutral(0.431)	NULL
FAM81A	145773	genome.wustl.edu	37	15	59808870	59808870	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152450.2	+1	validated	p.K271N	1.000	107	0%	290	32.1%	0	-	possibly_damaging(0.844)	tolerated(0.39)	neutral(0.340)	NULL
GCNT3	9245	genome.wustl.edu	37	15	59910449	59910449	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004751.2	+1	reviewed	p.W4*	0.326	96	0%	138	34.1%	1	0%	-	-	-	NULL
NARG2	79664	genome.wustl.edu	37	15	60741464	60741464	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024611.4	-1	validated	p.L568I	0.000	121	0%	136	40.4%	3	33.3%	possibly_damaging(0.462)	tolerated(0.35)	neutral(0.172)	NULL
RORA	6095	genome.wustl.edu	37	15	60907121	60907121	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002943.3	-1	reviewed	p.F81L	0.003	65	0%	59	22%	0	-	benign(0)	tolerated(0.66)	neutral(0.003)	NULL
VPS13C	54832	genome.wustl.edu	37	15	62207853	62207853	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020821.1	-1	validated	p.K2808N	1.000	48	0%	54	33.3%	6	50%	probably_damaging(1)	tolerated(0.28)	deleterious(0.531)	HMMPfam_DUF1162
VPS13C	54832	genome.wustl.edu	37	15	62234179	62234179	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020821.1	-1	validated	p.D1746Y	1.000	108	0%	105	41.9%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
VPS13C	54832	genome.wustl.edu	37	15	62254719	62254719	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020821.1	-1	validated	p.N1152H	0.993	88	0%	90	37.8%	0	-	probably_damaging(0.968)	deleterious(0.04)	deleterious(0.759)	NULL
VPS13C	54832	genome.wustl.edu	37	15	62256067	62256067	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020821.1	-1	validated	p.E1100K	1.000	231	0.4%	233	29.2%	1	0%	possibly_damaging(0.904)	tolerated(0.23)	neutral(0.400)	NULL
VPS13C	54832	genome.wustl.edu	37	15	62258291	62258291	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020821.1	-1	validated	p.Q1014H	0.997	163	0%	131	28.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LOC100289289	100289289	genome.wustl.edu	37	15	62538816	62538816	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343368.1	-1	model	p.E1140K	0.007	42	0%	31	41.9%	0	-	-	-	-	NULL
LOC100289289	100289289	genome.wustl.edu	37	15	62542661	62542661	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343368.1	-1	model	e24-1	0.002	26	0%	58	34.5%	0	-	-	-	-	-
TLN2	83660	genome.wustl.edu	37	15	62939604	62939604	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015059.2	+1	reviewed	p.R32Q	1.000	174	0%	375	31.2%	1	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
HERC1	8925	genome.wustl.edu	37	15	63907990	63907990	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003922.3	-1	reviewed	p.R4691*	1.000	111	0%	177	37.3%	23	26%	-	-	-	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
HERC1	8925	genome.wustl.edu	37	15	63926057	63926057	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003922.3	-1	reviewed	p.S4228Y	1.000	128	0%	187	21.4%	7	28.5%	probably_damaging(0.995)	-	-	HMMPfam_RCC1,superfamily_RCC1/BLIP-II
HERC1	8925	genome.wustl.edu	37	15	63950792	63950792	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003922.3	-1	reviewed	p.L3184I	1.000	101	0%	112	40.2%	4	25%	probably_damaging(0.993)	-	-	NULL
DAPK2	23604	genome.wustl.edu	37	15	64275759	64275759	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014326.3	-1	reviewed	p.R96H	0.998	31	0%	65	16.9%	1	0%	possibly_damaging(0.507)	tolerated(0.07)	deleterious(0.489)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
FAM96A	84191	genome.wustl.edu	37	15	64373324	64373324	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032231.4	-1	validated	p.R106*	1.000	161	0%	247	36.4%	27	33.3%	-	-	-	HMMPfam_DUF59
CSNK1G1	53944	genome.wustl.edu	37	15	64506264	64506264	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022048.3	-1	validated	p.E168D	1.000	318	0%	530	32.6%	8	62.5%	possibly_damaging(0.896)	tolerated(1)	neutral(0.353)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
ANKDD1A	348094	genome.wustl.edu	37	15	65208032	65208032	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182703.3	+1	validated	p.R24H	0.047	44	0%	84	40.5%	0	-	probably_damaging(0.973)	tolerated(0.13)	deleterious(0.667)	HMMPfam_Ank,superfamily_ANK
SPG21	51324	genome.wustl.edu	37	15	65257788	65257788	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127889.1	-1	reviewed	p.S228N	1.000	161	0%	312	33.3%	134	42.5%	probably_damaging(0.986)	tolerated(0.4)	neutral(0.451)	superfamily_SSF53474
OSTBETA	123264	genome.wustl.edu	37	15	65345308	65345308	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178859.3	+1	validated	p.E65*	0.644	139	0%	281	28.8%	0	-	-	-	-	NULL
CLPX	10845	genome.wustl.edu	37	15	65447302	65447302	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006660.3	-1	provisional	p.R477W	0.997	201	0%	268	32.5%	33	36.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_AAA_2,superfamily_P-loop containing nucleoside triphosphate hydrolases
CILP	8483	genome.wustl.edu	37	15	65489834	65489834	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003613.3	-1	reviewed	p.N930	0.929	162	0%	206	21.8%	1	0%	-	-	-	NULL
SLC24A1	9187	genome.wustl.edu	37	15	65917146	65917146	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004727.2	+1	validated	p.E243G	0.005	141	0%	222	34.2%	3	33.3%	unknown(0)	deleterious(0.01)	-	NULL
DENND4A	10260	genome.wustl.edu	37	15	65962413	65962413	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144823.1	-1	validated	p.F1525L	0.998	169	0%	183	38.3%	3	33.3%	probably_damaging(0.987)	tolerated(0.08)	deleterious(0.736)	NULL
DENND4A	10260	genome.wustl.edu	37	15	65992957	65992957	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144823.1	-1	validated	p.T919A	0.982	178	0%	162	36.4%	0	-	benign(0.209)	tolerated(0.64)	neutral(0.024)	NULL
DENND4A	10260	genome.wustl.edu	37	15	66025156	66025156	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144823.1	-1	validated	p.K347	1.000	125	0%	195	32.3%	1	100%	-	-	-	HMMPfam_DENN,HMMSmart_SM00799
TIPIN	54962	genome.wustl.edu	37	15	66641412	66641412	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017858.2	-1	validated	p.F154C	0.998	154	0%	249	34.5%	13	53.8%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
ZWILCH	55055	genome.wustl.edu	37	15	66812951	66812951	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017975.3	+1	validated	p.L182I	0.997	131	0%	161	26.7%	4	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF2352
LCTL	197021	genome.wustl.edu	37	15	66844108	66844108	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207338.2	-1	validated	p.G472	0.974	191	0%	315	30.5%	0	-	-	-	-	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat
AAGAB	79719	genome.wustl.edu	37	15	67528843	67528843	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024666.3	-1	validated	e3-1	1.000	144	0%	279	30.1%	0	-	-	-	-	-
MAP2K5	5607	genome.wustl.edu	37	15	67938601	67938601	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145160.1	+1	reviewed	p.Q206	1.000	166	0%	155	25.8%	6	66.6%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SKOR1	390598	genome.wustl.edu	37	15	68119450	68119450	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031807.1	+1	provisional	p.G384	0.044	4	0.000	12	0.583	0	-	-	-	-	NULL
PIAS1	8554	genome.wustl.edu	37	15	68379007	68379007	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016166.1	+1	reviewed	p.H130N	1.000	228	0%	237	30.8%	5	60%	benign(0.238)	tolerated(0.28)	neutral(0.056)	NULL
FEM1B	10116	genome.wustl.edu	37	15	68582322	68582322	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015322.3	+1	provisional	p.W209L	1.000	84	0%	147	32%	3	66.6%	benign(0.026)	tolerated(0.49)	neutral(0.011)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
FEM1B	10116	genome.wustl.edu	37	15	68582610	68582610	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015322.3	+1	provisional	p.R305I	1.000	67	0%	101	30.7%	3	100%	probably_damaging(0.99)	tolerated(0.06)	deleterious(0.764)	superfamily_ANK
NOX5	79400	genome.wustl.edu	37	15	69329410	69329410	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024505.3	+1	validated	p.L393M	0.994	119	0%	176	39.8%	0	-	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	HMMPfam_Ferric_reduct
NOX5	79400	genome.wustl.edu	37	15	69340218	69340218	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024505.3	+1	validated	p.I604	0.882	120	0%	204	32.4%	0	-	-	-	-	HMMPfam_NAD_binding_6,superfamily_SSF52343
ENSG00000245371	0	genome.wustl.edu	37	15	69689601	69689601	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000500759	-1	known	NULL	0.000	19	0%	33	21.2%	0	-	-	-	-	-
PAQR5	54852	genome.wustl.edu	37	15	69689852	69689852	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001104554.1	+1	validated	p.V186	0.042	281	0%	397	22.9%	5	60%	-	-	-	HMMPfam_HlyIII
KIF23	9493	genome.wustl.edu	37	15	69737171	69737171	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138555.1	+1	reviewed	p.R808*	1.000	64	0%	83	36.1%	14	28.5%	-	-	-	NULL
TLE3	7090	genome.wustl.edu	37	15	70344749	70344749	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005078.2	-1	validated	p.E700K	1.000	38	0%	45	37.8%	94	40.4%	possibly_damaging(0.944)	deleterious(0)	deleterious(0.833)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
UACA	55075	genome.wustl.edu	37	15	70959098	70959098	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018003.2	-1	validated	p.E1309*	1.000	190	0%	235	27.2%	41	21.9%	-	-	-	NULL
UACA	55075	genome.wustl.edu	37	15	70959911	70959911	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018003.2	-1	validated	p.F1038V	0.000	243	0%	301	32.2%	11	36.3%	benign(0)	tolerated(0.5)	neutral(0.010)	NULL
LARP6	55323	genome.wustl.edu	37	15	71124946	71124946	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018357.2	-1	validated	p.D307	0.060	258	0%	379	28.8%	34	41.1%	-	-	-	NULL
LRRC49	54839	genome.wustl.edu	37	15	71341765	71341765	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017691.2	+1	validated	p.K625N	1.000	39	0%	41	26.8%	12	33.3%	possibly_damaging(0.824)	tolerated(0.06)	deleterious(0.635)	NULL
MYO9A	4649	genome.wustl.edu	37	15	72338876	72338876	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006901.2	-1	validated	p.R10H	1.000	163	0%	213	31%	1	100%	probably_damaging(0.982)	deleterious(0.05)	deleterious(0.772)	NULL
SENP8	123228	genome.wustl.edu	37	15	72432336	72432336	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145204.3	+1	reviewed	p.S124	1.000	83	0%	154	35.1%	2	100%	-	-	-	HMMPfam_Peptidase_C48,superfamily_SSF54001
PKM2	5315	genome.wustl.edu	37	15	72500985	72500985	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002654.3	-1	reviewed	p.I271	0.762	192	0%	323	31%	1428	44.3%	-	-	-	HMMPfam_PK,superfamily_Phosphoenolpyruvate/pyruvate domain,PatternScan_PYRUVATE_KINASE
ARIH1	25820	genome.wustl.edu	37	15	72810461	72810461	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005744.3	+1	validated	p.E143	1.000	186	0%	368	40.8%	6	66.6%	-	-	-	NULL
ARIH1	25820	genome.wustl.edu	37	15	72859455	72859455	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005744.3	+1	validated	p.K321	1.000	176	0%	241	31.5%	25	48%	-	-	-	HMMSmart_SM00184
GOLGA6B	55889	genome.wustl.edu	37	15	72953838	72953838	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018652.4	+1	reviewed	p.D230	0.008	105	0%	169	6.5%	0	-	-	-	-	NULL
GOLGA6B	55889	genome.wustl.edu	37	15	72954968	72954968	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018652.4	+1	reviewed	p.R408M	0.093	310	0%	450	17.8%	0	-	probably_damaging(0.981)	tolerated(0.06)	deleterious(0.748)	NULL
HCN4	10021	genome.wustl.edu	37	15	73659958	73659958	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005477.2	-1	reviewed	p.F218	0.997	30	0%	53	35.8%	0	-	-	-	-	HMMPfam_Ion_trans_N
C15orf59	388135	genome.wustl.edu	37	15	74043444	74043444	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039614.1	-1	predicted	p.G10R	1.000	56	0%	73	32.9%	1	0%	probably_damaging(0.993)	deleterious(0.02)	deleterious(0.833)	NULL
STRA6	64220	genome.wustl.edu	37	15	74473263	74473263	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142617.1	-1	reviewed	p.R567Q	1.000	98	0%	118	31.4%	12	41.6%	benign(0.012)	tolerated(0.59)	neutral(0.005)	NULL
CCDC33	80125	genome.wustl.edu	37	15	74560711	74560711	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025055.3	+1	validated	p.A153V	0.000	80	0%	96	28.1%	0	-	possibly_damaging(0.711)	deleterious(0.04)	deleterious(0.606)	NULL
CYP1A1	1543	genome.wustl.edu	37	15	75014717	75014717	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000499.3	-1	reviewed	p.R241H	0.974	126	0%	220	35.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_p450,superfamily_Cytochrome P450
CYP1A2	1544	genome.wustl.edu	37	15	75043579	75043579	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000761.3	+1	reviewed	p.G294E	0.000	72	0%	137	31.4%	0	-	benign(0.323)	tolerated(1)	neutral(0.101)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP1A2	1544	genome.wustl.edu	37	15	75045556	75045556	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000761.3	+1	reviewed	p.Y400H	1.000	106	0%	208	33.7%	0	-	benign(0.239)	tolerated(0.46)	neutral(0.036)	HMMPfam_p450,superfamily_Cytochrome_P450
LMAN1L	79748	genome.wustl.edu	37	15	75105219	75105219	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021819.2	+1	validated	p.G8	0.000	86	0%	107	33.6%	0	-	-	-	-	NULL
LMAN1L	79748	genome.wustl.edu	37	15	75111579	75111579	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021819.2	+1	validated	p.F228L	1.000	215	0%	429	33.3%	0	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_Lectin_leg-like,superfamily_Concanavalin A-like lectins/glucanases
MPI	4351	genome.wustl.edu	37	15	75188521	75188521	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002435.1	+1	reviewed	p.I233	0.068	124	0%	203	33%	13	46.1%	-	-	-	HMMPfam_PMI_typeI,superfamily_RmlC-like cupins
C15orf39	56905	genome.wustl.edu	37	15	75500764	75500764	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015492.4	+1	validated	p.E792G	0.890	30	0%	34	20.6%	29	55.1%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
SIN3A	25942	genome.wustl.edu	37	15	75684730	75684730	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145357.1	-1	reviewed	p.L902I	1.000	212	0%	341	31.1%	14	35.7%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
SIN3A	25942	genome.wustl.edu	37	15	75687061	75687061	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145357.1	-1	reviewed	p.S746Y	1.000	164	0.6%	359	29.2%	16	12.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SIN3A	25942	genome.wustl.edu	37	15	75687179	75687179	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145357.1	-1	reviewed	p.R707*	1.000	151	0%	267	22.1%	12	0%	-	-	-	NULL
SIN3A	25942	genome.wustl.edu	37	15	75702509	75702509	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145357.1	-1	reviewed	p.F376C	1.000	96	0%	167	37.1%	11	63.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PAH,superfamily_PAH
CSPG4	1464	genome.wustl.edu	37	15	75982652	75982652	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001897.4	-1	reviewed	p.Y252H	1.000	58	0%	76	42.1%	1	0%	possibly_damaging(0.873)	tolerated(0.18)	neutral(0.395)	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
LOC441728	441728	genome.wustl.edu	37	15	76075457	76075457	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_017329.2	+1	model	NULL	0.449	277	0%	366	35.2%	0	-	-	-	-	-
FBXO22	26263	genome.wustl.edu	37	15	76206460	76206460	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_147188.1	+1	reviewed	p.R126I	1.000	147	0%	215	31.6%	38	55.2%	probably_damaging(0.962)	deleterious(0.01)	deleterious(0.810)	NULL
SCAPER	49855	genome.wustl.edu	37	15	76995328	76995328	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020843.2	-1	validated	p.R754*	1.000	77	0%	78	29.5%	10	20%	-	-	-	NULL
SCAPER	49855	genome.wustl.edu	37	15	77059308	77059308	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020843.2	-1	validated	p.E456G	1.000	539	0%	569	30.8%	2	0%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	NULL
SCAPER	49855	genome.wustl.edu	37	15	77064234	77064234	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020843.2	-1	validated	p.R365Q	0.000	202	0%	154	29.2%	2	50%	benign(0.001)	tolerated(0.46)	neutral(0.012)	NULL
SCAPER	49855	genome.wustl.edu	37	15	77064266	77064266	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020843.2	-1	validated	p.K354N	0.054	185	0%	139	38.8%	3	0%	benign(0.001)	deleterious(0.02)	neutral(0.383)	NULL
SGK269	79834	genome.wustl.edu	37	15	77473061	77473061	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024776.2	-1	validated	p.S403F	0.001	232	0%	253	34%	0	-	possibly_damaging(0.612)	deleterious(0.04)	deleterious(0.561)	NULL
HMG20A	10363	genome.wustl.edu	37	15	77771628	77771628	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018200.2	+1	provisional	p.R339*	1.000	166	0%	259	35.5%	10	30%	-	-	-	NULL
SH2D7	646892	genome.wustl.edu	37	15	78395850	78395850	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001101404.1	+1	provisional	p.K450T	0.016	84	0%	139	36%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
IDH3A	3419	genome.wustl.edu	37	15	78458574	78458574	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005530.2	+1	reviewed	p.R316H	0.999	184	0%	293	34.8%	47	36.1%	possibly_damaging(0.661)	tolerated(0.08)	deleterious(0.533)	HMMPfam_Iso_dh,superfamily_Isocitrate/Isopropylmalate dehydrogenase-like
ACSBG1	23205	genome.wustl.edu	37	15	78486902	78486902	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015162.3	-1	reviewed	p.I133	0.989	138	0%	146	38.4%	0	-	-	-	-	superfamily_Acetyl-CoA synthetase-like
WDR61	80349	genome.wustl.edu	37	15	78582307	78582307	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025234.1	-1	provisional	p.L152I	1.000	100	0%	127	26%	61	45.9%	possibly_damaging(0.944)	deleterious(0.01)	deleterious(0.794)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
IREB2	3658	genome.wustl.edu	37	15	78768609	78768609	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004136.2	+1	validated	p.R368Q	1.000	229	0%	385	35.3%	3	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Aconitase,superfamily_Aconitase iron-sulfur domain
CHRNA3	1136	genome.wustl.edu	37	15	78894312	78894312	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000743.4	-1	reviewed	p.C224	0.760	230	0.4%	579	35.4%	3	33.3%	-	-	-	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
CHRNA3	1136	genome.wustl.edu	37	15	78911147	78911147	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000743.4	-1	reviewed	p.E65K	1.000	86	0%	107	31.8%	0	-	probably_damaging(0.999)	tolerated(0.42)	deleterious(0.504)	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
CHRNB4	1143	genome.wustl.edu	37	15	78922160	78922160	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000750.3	-1	validated	p.D163N	1.000	86	0%	154	35.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL
ANKRD34C	390616	genome.wustl.edu	37	15	79586763	79586763	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343327.1	+1	model	p.L379	1.000	86	0%	91	29.7%	0	-	-	-	-	NULL
ANKRD34C	390616	genome.wustl.edu	37	15	79587179	79587179	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343327.1	+1	model	p.S518Y	1.000	65	0%	79	38%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ZFAND6	54469	genome.wustl.edu	37	15	80429946	80429946	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019006.2	+1	provisional	p.V201	0.983	136	0%	194	25.8%	32	65.6%	-	-	-	NULL
ARNT2	9915	genome.wustl.edu	37	15	80855474	80855474	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014862.3	+1	reviewed	p.R404C	1.000	164	0%	249	39.8%	5	40%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMSmart_SM00086,HMMPfam_PAS_3,superfamily_PYP-like sensor domain (PAS domain)
FAM108C1	58489	genome.wustl.edu	37	15	81046585	81046585	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021214.1	+1	validated	p.Y288	0.827	110	0%	131	28.2%	33	36.3%	-	-	-	superfamily_alpha/beta-Hydrolases
KIAA1199	57214	genome.wustl.edu	37	15	81214444	81214444	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018689.1	+1	validated	p.K723T	0.000	86	0%	118	36.4%	4	75%	benign(0)	tolerated(0.54)	neutral(0.007)	NULL
IL16	3603	genome.wustl.edu	37	15	81585333	81585333	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172217.3	+1	reviewed	p.E619D	0.023	41	0%	87	26.4%	0	-	benign(0.002)	tolerated(0.08)	neutral(0.300)	NULL
IL16	3603	genome.wustl.edu	37	15	81592611	81592611	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172217.3	+1	reviewed	p.E982K	0.957	89	0%	97	27.8%	3	0%	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
STARD5	80765	genome.wustl.edu	37	15	81605606	81605606	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181900.2	-1	validated	p.F211	0.000	129	0%	221	38%	2	0%	-	-	-	superfamily_Bet v1-like
TMC3	342125	genome.wustl.edu	37	15	81630994	81630994	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080532.1	-1	provisional	e18+2	1.000	122	0%	172	36%	0	-	-	-	-	-
TMC3	342125	genome.wustl.edu	37	15	81631106	81631106	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080532.1	-1	provisional	p.I657M	0.325	151	0%	176	29%	0	-	benign(0.037)	tolerated(0.7)	neutral(0.004)	NULL
TMC3	342125	genome.wustl.edu	37	15	81644069	81644069	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080532.1	-1	provisional	p.S350L	0.809	129	0%	161	31.1%	1	0%	benign(0.183)	tolerated(0.14)	neutral(0.267)	NULL
TMC3	342125	genome.wustl.edu	37	15	81651765	81651765	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080532.1	-1	provisional	p.L148	0.118	116	0%	152	25%	0	-	-	-	-	NULL
TMC3	342125	genome.wustl.edu	37	15	81666410	81666410	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080532.1	-1	provisional	p.T3	0.730	158	0%	169	27.8%	0	-	-	-	-	NULL
CPEB1	64506	genome.wustl.edu	37	15	83226509	83226509	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030594.3	-1	reviewed	e4+1	1.000	243	0%	325	34.2%	0	-	-	-	-	-
AP3B2	8120	genome.wustl.edu	37	15	83333169	83333169	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004644.3	-1	validated	p.S718	0.016	211	0%	347	30%	0	-	-	-	-	NULL
HOMER2	9455	genome.wustl.edu	37	15	83523509	83523509	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199330.1	-1	reviewed	p.R191W	1.000	46	0%	59	32.2%	72	41.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TM6SF1	53346	genome.wustl.edu	37	15	83781565	83781565	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023003.3	+1	validated	p.G37R	0.970	302	0%	433	30.9%	3	33.3%	possibly_damaging(0.514)	tolerated(0.54)	neutral(0.180)	NULL
TM6SF1	53346	genome.wustl.edu	37	15	83805386	83805386	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023003.3	+1	validated	p.F359L	1.000	177	0%	197	29.9%	4	0%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	NULL
BNC1	646	genome.wustl.edu	37	15	83933379	83933379	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001717.3	-1	reviewed	p.I208	0.852	141	0%	198	37.9%	0	-	-	-	-	NULL
SH3GL3	6457	genome.wustl.edu	37	15	84245382	84245382	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003027.3	+1	validated	p.K171N	0.998	101	0%	165	41.2%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_BAR,HMMSmart_SM00721
SH3GL3	6457	genome.wustl.edu	37	15	84245490	84245490	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003027.3	+1	validated	p.N207K	1.000	66	0%	123	37.4%	1	100%	benign(0.155)	tolerated(0.07)	neutral(0.333)	HMMPfam_BAR,HMMSmart_SM00721
SH3GL3	6457	genome.wustl.edu	37	15	84286874	84286874	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003027.3	+1	validated	p.L293	0.999	95	0%	175	33.7%	1	0%	-	-	-	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
ADAMTSL3	57188	genome.wustl.edu	37	15	84611417	84611417	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207517.2	+1	validated	p.Y729	0.995	107	0%	102	31.4%	1	0%	-	-	-	HMMPfam_TSP_1,HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat
ADAMTSL3	57188	genome.wustl.edu	37	15	84700184	84700184	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207517.2	+1	validated	p.R1585I	1.000	60	0%	84	36.9%	1	0%	possibly_damaging(0.908)	deleterious(0)	deleterious(0.806)	NULL
ADAMTSL3	57188	genome.wustl.edu	37	15	84706509	84706509	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207517.2	+1	validated	p.S1676Y	0.456	189	0%	181	27.6%	0	-	possibly_damaging(0.697)	tolerated(0.19)	neutral(0.299)	HMMPfam_PLAC
SLC28A1	9154	genome.wustl.edu	37	15	85438202	85438202	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004213.3	+1	validated	p.L103	1.000	79	0%	122	32.8%	0	-	-	-	-	NULL
PDE8A	5151	genome.wustl.edu	37	15	85664054	85664054	+	Silent	SNP	C	C	T	rs149557632		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002605.2	+1	validated	p.V587	0.008	154	0%	155	29.7%	3	100%	-	-	-	HMMPfam_PDEase_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like
AKAP13	11214	genome.wustl.edu	37	15	86253827	86253827	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006738.4	+1	reviewed	p.L1854	0.947	224	0%	330	28.2%	9	33.3%	-	-	-	NULL
AGBL1	123624	genome.wustl.edu	37	15	86686942	86686942	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000441037	+1	known	p.R26K	1.000	153	0%	144	33.3%	0	-	possibly_damaging(0.791)	deleterious(0)	deleterious(0.741)	superfamily_ARM repeat
AGBL1	123624	genome.wustl.edu	37	15	86809687	86809687	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152336.2	+1	validated	p.W538R	0.904	303	0%	343	33.2%	0	-	benign(0)	tolerated(0.49)	neutral(0.011)	NULL
NTRK3	4916	genome.wustl.edu	37	15	88524532	88524532	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007156.1	-1	reviewed	p.L549I	1.000	245	0%	297	32%	0	-	benign(0.35)	deleterious(0)	deleterious(0.555)	NULL
ACAN	176	genome.wustl.edu	37	15	89400117	89400117	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013227.3	+1	reviewed	p.S1319Y	0.995	154	0%	149	30.9%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
ACAN	176	genome.wustl.edu	37	15	89400429	89400429	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013227.3	+1	reviewed	p.S1423Y	0.284	99	0%	132	41.7%	0	-	probably_damaging(0.993)	deleterious(0.02)	deleterious(0.833)	NULL
ACAN	176	genome.wustl.edu	37	15	89400953	89400953	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013227.3	+1	reviewed	p.T1598S	0.367	77	0%	155	34.8%	0	-	possibly_damaging(0.748)	tolerated(0.45)	neutral(0.287)	NULL
ACAN	176	genome.wustl.edu	37	15	89401133	89401133	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013227.3	+1	reviewed	p.L1658I	0.000	54	0%	63	31.7%	0	-	possibly_damaging(0.808)	tolerated(0.59)	neutral(0.308)	NULL
ACAN	176	genome.wustl.edu	37	15	89402266	89402266	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013227.3	+1	reviewed	p.S2035	0.000	63	0%	92	45.7%	1	0%	-	-	-	NULL
HAPLN3	145864	genome.wustl.edu	37	15	89422304	89422304	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178232.2	-1	reviewed	p.R230	0.501	18	0%	14	42.9%	63	44.4%	-	-	-	HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,superfamily_C-type lectin-like
HAPLN3	145864	genome.wustl.edu	37	15	89422305	89422305	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178232.2	-1	reviewed	p.R230Q	1.000	18	0%	15	40%	63	47.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Xlink,HMMSmart_SM00445,PatternScan_LINK_1,superfamily_C-type lectin-like
MFGE8	4240	genome.wustl.edu	37	15	89449889	89449889	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005928.2	-1	validated	p.D170N	0.620	69	0%	111	36%	449	42%	benign(0.039)	tolerated(0.38)	neutral(0.020)	HMMPfam_F5_F8_type_C,HMMSmart_SM00231,superfamily_Galactose-binding domain-like
ABHD2	11057	genome.wustl.edu	37	15	89719185	89719185	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007011.7	+1	reviewed	p.V227	0.983	88	0%	144	31.9%	20	35%	-	-	-	HMMPfam_Abhydrolase_1,superfamily_SSF53474
FANCI	55215	genome.wustl.edu	37	15	89828350	89828350	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113378.1	+1	reviewed	p.H574Q	0.994	192	0%	314	29.6%	17	29.4%	benign(0.001)	tolerated(0.68)	neutral(0.002)	NULL
FANCI	55215	genome.wustl.edu	37	15	89836061	89836061	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113378.1	+1	reviewed	p.R712I	1.000	259	0%	321	34.6%	7	28.5%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
FANCI	55215	genome.wustl.edu	37	15	89838242	89838242	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113378.1	+1	reviewed	p.Q851	1.000	150	0%	249	34.1%	24	41.6%	-	-	-	NULL
POLG	5428	genome.wustl.edu	37	15	89876725	89876725	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001126131.1	-1	reviewed	p.I87	1.000	24	0%	44	27.3%	7	14.2%	-	-	-	NULL
RHCG	51458	genome.wustl.edu	37	15	90020021	90020021	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016321.1	-1	provisional	p.D426Y	0.998	129	0%	195	28.7%	15	40%	possibly_damaging(0.7)	deleterious(0)	deleterious(0.696)	HMMPfam_Ammonium_transp
C15orf42	90381	genome.wustl.edu	37	15	90143870	90143870	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152259.3	+1	validated	p.R703*	0.988	64	0%	85	23.5%	3	0%	-	-	-	NULL
C15orf42	90381	genome.wustl.edu	37	15	90159718	90159718	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152259.3	+1	validated	p.I984	1.000	82	0%	122	34.4%	4	50%	-	-	-	NULL
C15orf42	90381	genome.wustl.edu	37	15	90164674	90164674	+	Missense_Mutation	SNP	C	C	A	rs56673030		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152259.3	+1	validated	p.L1069I	0.999	132	0%	260	26.9%	1	0%	probably_damaging(0.99)	tolerated(0.11)	deleterious(0.713)	NULL
C15orf42	90381	genome.wustl.edu	37	15	90168261	90168261	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152259.3	+1	validated	p.R1574*	0.870	41	0%	72	34.7%	7	14.2%	-	-	-	NULL
WDR93	56964	genome.wustl.edu	37	15	90270521	90270521	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020212.1	+1	provisional	p.K338N	0.833	61	0%	73	31.5%	0	-	benign(0.147)	tolerated(0.35)	neutral(0.034)	NULL
ANPEP	290	genome.wustl.edu	37	15	90335727	90335727	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001150.2	-1	reviewed	p.V772	0.018	133	0%	271	36.9%	14	0%	-	-	-	NULL
C15orf38	348110	genome.wustl.edu	37	15	90446506	90446506	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182616.2	-1	validated	p.S205L	0.675	279	0%	571	33.1%	9	44.4%	benign(0.173)	deleterious(0.01)	neutral(0.422)	HMMPfam_UPF0552
ZNF774	342132	genome.wustl.edu	37	15	90897943	90897943	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004309.2	+1	validated	p.E17D	0.975	129	0%	332	32.5%	2	0%	benign(0.098)	deleterious(0)	neutral(0.452)	NULL
FES	2242	genome.wustl.edu	37	15	91435992	91435992	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002005.3	+1	reviewed	p.A588V	1.000	88	0%	89	28.1%	12	8.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP
FES	2242	genome.wustl.edu	37	15	91437276	91437276	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002005.3	+1	reviewed	p.F772L	0.960	41	0%	77	24.7%	19	10.5%	benign(0.007)	tolerated(0.25)	neutral(0.037)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
VPS33B	26276	genome.wustl.edu	37	15	91548976	91548976	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018668.3	-1	reviewed	p.F326L	0.941	37	0%	60	25%	13	46.1%	possibly_damaging(0.912)	deleterious(0)	deleterious(0.808)	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins
SV2B	9899	genome.wustl.edu	37	15	91811734	91811734	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014848.4	+1	validated	p.K424N	1.000	204	0%	357	31.7%	0	-	benign(0.119)	tolerated(0.29)	neutral(0.038)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
SLCO3A1	28232	genome.wustl.edu	37	15	92397231	92397231	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013272.3	+1	validated	p.K31N	1.000	16	0%	12	41.7%	1	0%	possibly_damaging(0.564)	deleterious(0.04)	deleterious(0.541)	superfamily_MFS general substrate transporter
SLCO3A1	28232	genome.wustl.edu	37	15	92671694	92671694	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013272.3	+1	validated	p.A496V	1.000	164	0%	260	25%	6	16.6%	unknown(0)	-	-	HMMPfam_OATP,HMMPfam_Kazal_2,superfamily_MFS general substrate transporter,superfamily_Kazal-type serine protease inhibitors
C15orf32	145858	genome.wustl.edu	37	15	93015693	93015693	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153040.2	+1	predicted	p.S105	0.000	94	0%	138	35.5%	0	-	-	-	-	NULL
CHD2	1106	genome.wustl.edu	37	15	93486285	93486285	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001271.3	+1	reviewed	p.E347K	1.000	65	0%	163	33.1%	10	40%	possibly_damaging(0.865)	deleterious(0.01)	deleterious(0.741)	superfamily_P-loop containing nucleoside triphosphate hydrolases
CHD2	1106	genome.wustl.edu	37	15	93567633	93567633	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001271.3	+1	reviewed	p.D1729N	1.000	75	0%	98	24.5%	30	46.6%	benign(0.026)	tolerated(0.09)	neutral(0.297)	NULL
MCTP2	55784	genome.wustl.edu	37	15	94910998	94910998	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018349.3	+1	validated	p.R489I	0.994	64	0%	47	46.8%	0	-	benign(0.123)	tolerated(0.13)	neutral(0.263)	NULL
MCTP2	55784	genome.wustl.edu	37	15	94913375	94913375	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018349.3	+1	validated	p.L516	0.978	221	0%	198	31.8%	0	-	-	-	-	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
IGF1R	3480	genome.wustl.edu	37	15	99434709	99434709	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000875.3	+1	reviewed	p.P266S	1.000	68	0%	75	36%	6	50%	benign(0.002)	tolerated(0.18)	neutral(0.056)	HMMPfam_Furin-like,HMMSmart_FU,superfamily_Grow_fac_recept
IGF1R	3480	genome.wustl.edu	37	15	99460097	99460097	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000875.3	+1	reviewed	p.F731L	0.414	99	0%	135	31.1%	10	40%	benign(0.355)	deleterious(0.03)	deleterious(0.477)	HMMSmart_FN3,superfamily_FN_III-like
PGPEP1L	145814	genome.wustl.edu	37	15	99511748	99511748	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102612.2	-1	validated	p.E184K	0.074	108	0%	197	30.5%	0	-	benign(0.016)	tolerated(0.31)	neutral(0.028)	superfamily_Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
SYNM	23336	genome.wustl.edu	37	15	99666963	99666963	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000336292	+1	known	p.V323	0.000	217	0%	354	33.1%	0	-	-	-	-	NULL
SYNM	23336	genome.wustl.edu	37	15	99671981	99671981	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000336292	+1	known	p.R1138Q	0.005	31	0%	33	36.4%	1	100%	benign(0.008)	tolerated(1)	-	NULL
LRRC28	123355	genome.wustl.edu	37	15	99796186	99796186	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144598.2	+1	provisional	p.T8	0.997	153	0%	126	38.9%	8	50%	-	-	-	superfamily_L domain-like
HSP90B2P	7190	genome.wustl.edu	37	15	99800094	99800094	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000378906	+1	known	p.E357*	1.000	138	0%	266	38%	0	-	-	-	-	HMMPfam_HSP90
ADAMTS17	170691	genome.wustl.edu	37	15	100672302	100672302	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139057.2	-1	reviewed	p.G544E	1.000	62	0%	56	28.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_TSP-1 type 1 repeat
LRRK1	79705	genome.wustl.edu	37	15	101550769	101550769	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024652.3	+1	validated	p.F368	0.930	169	0%	258	31.4%	0	-	-	-	-	superfamily_L domain-like
LRRK1	79705	genome.wustl.edu	37	15	101550984	101550984	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024652.3	+1	validated	p.S408Y	0.000	169	0%	161	44.1%	1	0%	benign(0.225)	tolerated(0.44)	neutral(0.035)	HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like
LRRK1	79705	genome.wustl.edu	37	15	101565169	101565169	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024652.3	+1	validated	p.I743	0.875	49	0%	41	51.2%	2	0%	-	-	-	HMMPfam_Miro,superfamily_P-loop containing nucleoside triphosphate hydrolases
LRRK1	79705	genome.wustl.edu	37	15	101567474	101567474	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024652.3	+1	validated	p.S805F	1.000	37	0%	63	44.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
PCSK6	5046	genome.wustl.edu	37	15	101922356	101922356	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138320.1	-1	reviewed	p.E491*	0.992	102	0%	168	32.7%	0	-	benign(0.424)	deleterious(0.04)	deleterious(0.486)	NULL
PCSK6	5046	genome.wustl.edu	37	15	101933521	101933521	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000331826	-1	known	p.V368I	0.925	137	0%	170	29.4%	2	0%	benign(0.033)	tolerated(1)	neutral(0.002)	HMMPfam_Peptidase_S8,superfamily_Subtilisin-like
PCSK6	5046	genome.wustl.edu	37	15	101938627	101938627	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138320.1	-1	reviewed	p.R326*	0.986	114	0.9%	118	34.7%	0	-	-	-	-	NULL
TARSL2	123283	genome.wustl.edu	37	15	102197211	102197211	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152334.2	-1	validated	p.F725S	1.000	236	0%	304	23.7%	7	14.2%	possibly_damaging(0.909)	deleterious(0)	deleterious(0.806)	HMMPfam_HGTP_anticodon,superfamily_Anticodon-binding domain of Class II aaRS
OR4F6	390648	genome.wustl.edu	37	15	102346376	102346376	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005326.1	+1	provisional	p.G152C	0.021	255	0%	377	33.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR4F6	390648	genome.wustl.edu	37	15	102346449	102346449	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005326.1	+1	provisional	p.S176N	0.167	314	0%	367	29.7%	0	-	possibly_damaging(0.584)	tolerated(0.26)	neutral(0.235)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
MPG	4350	genome.wustl.edu	37	16	129691	129691	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002434.2	+1	validated	p.L103	1.000	52	0%	93	25.8%	95	34.7%	-	-	-	HMMPfam_Pur_DNA_glyco,superfamily_FMT C-terminal domain-like
LUC7L	55692	genome.wustl.edu	37	16	256022	256022	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201412.1	-1	validated	p.A164V	0.646	236	0%	535	32.5%	48	37.5%	benign(0.002)	tolerated(0.19)	neutral(0.050)	HMMPfam_LUC7
LOC100129478	100129478	genome.wustl.edu	37	16	281201	281201	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001719774.2	+1	model	p.D23	0.001	31	3.2%	66	36.4%	0	-	-	-	-	NULL
PDIA2	64714	genome.wustl.edu	37	16	334590	334590	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006849.2	+1	validated	p.T135A	0.210	42	0%	88	38.6%	0	-	benign(0)	tolerated(0.27)	neutral(0.034)	superfamily_Thiordxn-like_fd,HMMPfam_Thioredoxin
AXIN1	8312	genome.wustl.edu	37	16	396589	396589	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003502.2	-1	reviewed	p.R146Q	0.996	116	0%	185	35.1%	17	41.1%	possibly_damaging(0.756)	deleterious(0.02)	deleterious(0.662)	HMMPfam_RGS,HMMSmart_SM00315,superfamily_Regulator of G-protein signaling RGS
RAB11FIP3	9727	genome.wustl.edu	37	16	560667	560667	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014700.3	+1	validated	p.A503T	1.000	61	0%	89	31.5%	13	38.4%	probably_damaging(1)	tolerated(1)	deleterious(0.500)	NULL
RAB11FIP3	9727	genome.wustl.edu	37	16	570824	570824	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014700.3	+1	validated	p.I752	1.000	76	0%	174	37.9%	33	30.3%	-	-	-	HMMPfam_RBD-FIP
NARFL	64428	genome.wustl.edu	37	16	789675	789675	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022493.1	-1	provisional	p.E44*	0.992	218	0%	374	34.5%	15	40%	-	-	-	NULL
MSLNL	401827	genome.wustl.edu	37	16	822800	822800	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025190.1	-1	provisional	p.Q769H	0.956	34	0%	74	33.8%	0	-	probably_damaging(0.965)	tolerated(0.11)	deleterious(0.678)	HMMPfam_Mesothelin
CHTF18	63922	genome.wustl.edu	37	16	843220	843220	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022092.2	+1	validated	p.R583H	1.000	32	0%	32	31.2%	33	39.3%	benign(0.083)	tolerated(0.77)	neutral(0.007)	superfamily_P-loop containing nucleoside triphosphate hydrolases
CACNA1H	8912	genome.wustl.edu	37	16	1248712	1248712	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021098.2	+1	reviewed	p.V247	0.930	143	0%	129	26.4%	2	0%	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1H	8912	genome.wustl.edu	37	16	1250534	1250534	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021098.2	+1	reviewed	p.F361S	1.000	46	0%	80	33.8%	0	-	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1H	8912	genome.wustl.edu	37	16	1250547	1250547	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021098.2	+1	reviewed	p.G365	1.000	47	0%	87	36.8%	1	0%	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1H	8912	genome.wustl.edu	37	16	1255242	1255242	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021098.2	+1	reviewed	p.F860	0.899	51	0%	71	25.4%	5	0%	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CRAMP1L	57585	genome.wustl.edu	37	16	1705240	1705240	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020825.3	+1	validated	p.R353Q	0.998	112	0%	199	33.7%	1	0%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
CRAMP1L	57585	genome.wustl.edu	37	16	1705265	1705265	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020825.3	+1	validated	p.F361L	0.998	115	0%	232	34.5%	2	50%	possibly_damaging(0.952)	tolerated(0.07)	deleterious(0.715)	NULL
CRAMP1L	57585	genome.wustl.edu	37	16	1712618	1712618	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020825.3	+1	validated	p.F847L	1.000	108	0%	152	28.3%	6	33.3%	benign(0.249)	deleterious(0.01)	neutral(0.431)	NULL
MAPK8IP3	23162	genome.wustl.edu	37	16	1812897	1812897	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015133.3	+1	reviewed	p.S595	0.022	73	0%	94	36.2%	10	50%	-	-	-	NULL
HAGH	3029	genome.wustl.edu	37	16	1869159	1869159	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005326.4	-1	reviewed	p.F166	0.970	30	0%	45	44.4%	60	6.6%	-	-	-	HMMPfam_Lactamase_B,superfamily_Metallo-hydrolase/oxidoreductase
NDUFB10	4716	genome.wustl.edu	37	16	2009724	2009724	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004548.2	+1	validated	p.L33	0.906	22	0%	45	24.4%	193	39.8%	-	-	-	NULL
RNF151	146310	genome.wustl.edu	37	16	2017301	2017301	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174903.4	+1	provisional	p.F10	1.000	47	0%	54	33.3%	0	-	-	-	-	superfamily_SSF57850
ZNF598	90850	genome.wustl.edu	37	16	2049783	2049783	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000431526	-1	known	p.K589N	1.000	16	0%	12	58.3%	41	58.5%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	NULL
TSC2	7249	genome.wustl.edu	37	16	2108831	2108831	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000548.3	+1	reviewed	p.S311F	0.878	115	0%	204	16.2%	15	13.3%	benign(0.173)	tolerated(0.13)	neutral(0.269)	superfamily_ARM repeat
PKD1	5310	genome.wustl.edu	37	16	2158464	2158464	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009944.2	-1	reviewed	p.S2235*	1.000	12	0%	14	28.6%	3	0%	-	-	-	HMMPfam_REJ
ABCA3	21	genome.wustl.edu	37	16	2338190	2338190	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001089.2	-1	reviewed	p.S947	0.997	50	0%	77	35.1%	2	50%	-	-	-	NULL
ABCA3	21	genome.wustl.edu	37	16	2347837	2347837	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001089.2	-1	reviewed	p.R661Q	0.000	40	0%	60	36.7%	0	-	possibly_damaging(0.776)	tolerated(0.13)	deleterious(0.542)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCA3	21	genome.wustl.edu	37	16	2354117	2354117	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001089.2	-1	reviewed	p.P440	0.000	44	0%	106	33%	2	100%	-	-	-	NULL
CCNF	899	genome.wustl.edu	37	16	2495622	2495622	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001761.2	+1	reviewed	p.R365W	1.000	27	0%	34	29.4%	12	58.3%	possibly_damaging(0.939)	deleterious(0.03)	deleterious(0.749)	HMMSmart_CYCLIN,HMMPfam_Cyclin_N,superfamily_Cyclin_like
TBC1D24	57465	genome.wustl.edu	37	16	2546824	2546824	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020705.1	+1	provisional	p.F225	0.073	61	0%	80	38.8%	1	100%	-	-	-	HMMPfam_TBC,HMMSmart_TBC,superfamily_RabGAP_TBC
SRRM2	23524	genome.wustl.edu	37	16	2809575	2809575	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016333.3	+1	validated	p.R249Q	1.000	66	0%	78	29.5%	22	31.8%	unknown(0)	-	-	NULL
SRRM2	23524	genome.wustl.edu	37	16	2814313	2814313	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016333.3	+1	validated	p.E1262*	1.000	53	0%	67	31.3%	27	14.8%	-	-	-	NULL
SRRM2	23524	genome.wustl.edu	37	16	2815472	2815472	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016333.3	+1	validated	p.S1648Y	0.992	53	0%	123	33.3%	69	23.1%	unknown(0)	-	-	NULL
SRRM2	23524	genome.wustl.edu	37	16	2815820	2815820	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016333.3	+1	validated	p.S1764L	1.000	68	0%	78	34.6%	79	34.1%	unknown(0)	-	-	NULL
SRRM2	23524	genome.wustl.edu	37	16	2816501	2816501	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016333.3	+1	validated	p.R1991Q	0.404	49	0%	109	33.9%	103	60.1%	unknown(0)	-	-	NULL
SRRM2	23524	genome.wustl.edu	37	16	2816824	2816824	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016333.3	+1	validated	p.H2099N	1.000	54	0%	102	31.4%	108	21.2%	probably_damaging(0.971)	-	-	NULL
PRSS41	360226	genome.wustl.edu	37	16	2854436	2854436	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135086.1	+1	provisional	p.I209	0.088	144	0%	265	34.7%	0	-	-	-	-	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
PRSS22	64063	genome.wustl.edu	37	16	2906160	2906160	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022119.3	-1	reviewed	p.Q68H	0.962	77	0%	72	33.3%	20	25%	possibly_damaging(0.684)	tolerated(0.19)	neutral(0.293)	HMMPfam_Trypsin,HMMSmart_Tryp_SPc,superfamily_Pept_Ser_Cys
ZSCAN10	84891	genome.wustl.edu	37	16	3140388	3140388	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032805.1	-1	provisional	p.C294	0.972	16	0%	26	61.5%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
OR1F1	4992	genome.wustl.edu	37	16	3254840	3254840	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012360.1	+1	provisional	p.I198	0.000	119	0%	339	35.7%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
MEFV	4210	genome.wustl.edu	37	16	3293560	3293560	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000243.2	-1	reviewed	p.L643M	1.000	89	0%	138	40.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00589
MEFV	4210	genome.wustl.edu	37	16	3304252	3304252	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000243.2	-1	reviewed	p.D272	0.000	105	0%	168	34.5%	0	-	-	-	-	NULL
ZNF263	10127	genome.wustl.edu	37	16	3340035	3340035	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005741.4	+1	validated	p.R510I	1.000	102	0%	181	34.3%	20	65%	probably_damaging(0.996)	tolerated(0.05)	deleterious(0.807)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF75A	7627	genome.wustl.edu	37	16	3367520	3367520	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153028.2	+1	validated	p.R181I	1.000	110	0.9%	243	30.5%	5	20%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF597	146434	genome.wustl.edu	37	16	3486465	3486465	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152457.1	-1	provisional	p.L412I	0.810	112	0%	178	38.8%	1	0%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF597	146434	genome.wustl.edu	37	16	3486862	3486862	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152457.1	-1	provisional	p.E279D	0.008	55	0%	97	24.7%	3	0%	possibly_damaging(0.632)	deleterious(0.03)	deleterious(0.586)	NULL
C16orf90	646174	genome.wustl.edu	37	16	3543933	3543933	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080524.1	-1	predicted	p.S152Y	0.458	71	0%	110	32.7%	0	-	possibly_damaging(0.805)	tolerated(0.09)	deleterious(0.599)	NULL
SLX4	84464	genome.wustl.edu	37	16	3642849	3642849	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032444.2	-1	provisional	p.F726L	0.941	30	0%	63	33.3%	4	50%	benign(0.296)	deleterious(0.02)	deleterious(0.475)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
DNASE1	1773	genome.wustl.edu	37	16	3706656	3706656	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005223.3	+1	reviewed	p.A113V	0.071	41	0%	65	23.1%	9	55.5%	benign(0)	tolerated(1)	-	HMMPfam_Exo_endo_phos,superfamily_DNase I-like,HMMSmart_SM00476
ADCY9	115	genome.wustl.edu	37	16	4015871	4015871	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001116.2	-1	reviewed	p.R1323*	0.352	247	0%	443	31.4%	0	-	-	-	-	NULL
SRL	6345	genome.wustl.edu	37	16	4245759	4245759	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098814.1	-1	validated	p.T135	0.553	94	0%	209	34.4%	0	-	-	-	-	superfamily_SSF52540
CORO7	79585	genome.wustl.edu	37	16	4411019	4411019	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024535.3	-1	validated	p.S614	1.000	76	0%	158	41.8%	36	41.6%	-	-	-	HMMSmart_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_WD40
CORO7	79585	genome.wustl.edu	37	16	4412714	4412714	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024535.3	-1	validated	p.S434L	0.712	40	0%	68	33.8%	23	13%	probably_damaging(0.998)	tolerated(0.19)	deleterious(0.524)	NULL
LOC342346	342346	genome.wustl.edu	37	16	4624743	4624743	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145011.1	+1	predicted	p.D187Y	0.024	65	0%	128	39.8%	0	-	unknown(0)	deleterious(0)	-	NULL
LOC342346	342346	genome.wustl.edu	37	16	4625834	4625834	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145011.1	+1	predicted	p.L451	0.000	45	0%	107	35.5%	0	-	-	-	-	NULL
C16orf71	146562	genome.wustl.edu	37	16	4797544	4797544	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139170.2	+1	validated	p.R494I	0.005	17	0.000	8	0.500	0	-	benign(0.303)	tolerated(0.12)	neutral(0.355)	NULL
SEPT12	124404	genome.wustl.edu	37	16	4827986	4827986	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144605.3	-1	validated	p.D297Y	1.000	118	0%	199	30.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Septin
GLYR1	84656	genome.wustl.edu	37	16	4855273	4855273	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032569.3	-1	validated	p.N542	0.921	109	0%	183	35%	53	33.9%	-	-	-	superfamily_6-phosphogluconate dehydrogenase C-terminal domain-like
UBN1	29855	genome.wustl.edu	37	16	4909145	4909145	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001079514.1	+1	validated	p.K184N	1.000	108	0%	204	36.8%	9	11.1%	probably_damaging(0.998)	tolerated(0.09)	deleterious(0.771)	NULL
PPL	5493	genome.wustl.edu	37	16	4934126	4934126	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002705.4	-1	reviewed	p.G1510	0.003	45	0%	68	32.4%	29	62%	-	-	-	NULL
PPL	5493	genome.wustl.edu	37	16	4940896	4940896	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002705.4	-1	reviewed	p.Q665H	0.999	20	0%	31	29%	14	21.4%	benign(0)	tolerated(0.17)	neutral(0.059)	superfamily_Spectrin repeat
C16orf89	146556	genome.wustl.edu	37	16	5108551	5108551	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152459.3	-1	validated	p.P228	0.025	69	0%	101	35.6%	0	-	-	-	-	NULL
C16orf89	146556	genome.wustl.edu	37	16	5112433	5112433	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152459.3	-1	validated	p.Y155	1.000	56	0%	56	37.5%	0	-	-	-	-	NULL
RBFOX1	54715	genome.wustl.edu	37	16	7657293	7657293	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145891.2	+1	reviewed	p.K230T	1.000	478	0.2%	526	35%	0	-	benign(0.006)	deleterious(0.01)	neutral(0.406)	NULL
RBFOX1	54715	genome.wustl.edu	37	16	7721591	7721591	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145891.2	+1	reviewed	p.K328T	1.000	289	0%	349	32.4%	0	-	benign(0.006)	tolerated(0.06)	neutral(0.323)	NULL
USP7	7874	genome.wustl.edu	37	16	8994476	8994476	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003470.2	-1	validated	p.P740	1.000	125	0%	227	39.6%	67	52.2%	-	-	-	NULL
GRIN2A	2903	genome.wustl.edu	37	16	9858181	9858181	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000833.3	-1	reviewed	p.P1074S	0.203	94	0%	113	27.4%	0	-	benign(0.032)	tolerated(0.67)	neutral(0.004)	HMMPfam_NMDAR2_C
GRIN2A	2903	genome.wustl.edu	37	16	10274141	10274141	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000833.3	-1	reviewed	p.S43N	0.999	17	0%	28	57.1%	0	-	benign(0.002)	deleterious(0.01)	neutral(0.406)	superfamily_Periplasmic binding protein-like I
ATF7IP2	80063	genome.wustl.edu	37	16	10551296	10551296	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024997.2	+1	validated	p.S421Y	0.462	132	0%	203	30%	0	-	possibly_damaging(0.813)	deleterious(0.02)	deleterious(0.690)	NULL
EMP2	2013	genome.wustl.edu	37	16	10637458	10637458	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001424.4	-1	validated	p.T46	0.006	204	0%	433	32.6%	60	50%	-	-	-	HMMPfam_PMP22_Claudin
NUBP1	4682	genome.wustl.edu	37	16	10862939	10862939	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002484.2	+1	validated	p.E314*	0.019	107	0%	200	28.5%	23	30.4%	-	-	-	NULL
NUBP1	4682	genome.wustl.edu	37	16	10862944	10862944	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002484.2	+1	validated	p.E315D	0.056	107	0%	196	31.1%	24	41.6%	benign(0)	tolerated(0.4)	neutral(0.016)	NULL
CLEC16A	23274	genome.wustl.edu	37	16	11097005	11097005	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015226.2	+1	validated	p.K382	0.999	89	0%	164	36.6%	3	66.6%	-	-	-	NULL
SNN	8303	genome.wustl.edu	37	16	11769982	11769982	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003498.5	+1	validated	p.A23T	1.000	46	0%	81	29.6%	7	42.8%	possibly_damaging(0.643)	deleterious(0)	deleterious(0.670)	HMMPfam_SNN_transmemb
GSPT1	2935	genome.wustl.edu	37	16	11980450	11980450	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002094.3	-1	validated	p.E377	1.000	142	0%	250	26.8%	61	50.8%	-	-	-	HMMPfam_GTP_EFTU,superfamily_P-loop containing nucleoside triphosphate hydrolases
SHISA9	729993	genome.wustl.edu	37	16	13010572	13010572	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145204.2	+1	validated	p.Q238H	1.000	74	0%	125	40.8%	0	-	probably_damaging(0.992)	deleterious(0.02)	deleterious(0.831)	NULL
ERCC4	2072	genome.wustl.edu	37	16	14041527	14041527	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005236.2	+1	reviewed	p.R692*	1.000	128	0%	172	32%	2	100%	-	-	-	HMMPfam_ERCC4,superfamily_Restrict_endonuc_II-like_core
NOMO1	23420	genome.wustl.edu	37	16	14947806	14947806	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014287.3	+1	reviewed	p.R296*	0.999	484	0%	846	28.5%	29	0%	-	-	-	superfamily_Carboxypeptidase regulatory domain
NOMO1	23420	genome.wustl.edu	37	16	14972641	14972641	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014287.3	+1	reviewed	p.R903C	1.000	650	0%	1080	20.5%	117	0.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cna_B,superfamily_Starch-binding domain-like
PDXDC1	23042	genome.wustl.edu	37	16	15100250	15100250	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015027.2	+1	validated	e6-1	1.000	206	0%	456	13.2%	0	-	-	-	-	-
KIAA0430	9665	genome.wustl.edu	37	16	15706615	15706615	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014647.3	-1	validated	p.S1091	0.998	72	0%	192	28.6%	3	0%	unknown(0)	deleterious(0.02)	-	NULL
KIAA0430	9665	genome.wustl.edu	37	16	15727481	15727481	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014647.3	-1	validated	p.N409T	1.000	59	0%	59	28.8%	4	50%	probably_damaging(0.987)	deleterious(0.02)	deleterious(0.820)	HMMPfam_DUF537
MYH11	4629	genome.wustl.edu	37	16	15814759	15814759	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040114.1	-1	reviewed	p.F1583	0.630	122	0.8%	181	33.1%	49	0%	-	-	-	HMMPfam_Myosin_tail_1
MYH11	4629	genome.wustl.edu	37	16	15931948	15931948	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040114.1	-1	reviewed	p.K54N	0.963	304	0%	713	30.6%	12	0%	benign(0.064)	tolerated(0.31)	neutral(0.031)	HMMPfam_Myosin_N,superfamily_SSF52540
ABCC1	4363	genome.wustl.edu	37	16	16108483	16108483	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004996.3	+1	reviewed	p.E163*	0.962	96	0%	215	33.5%	1	0%	-	-	-	NULL
ABCC1	4363	genome.wustl.edu	37	16	16130428	16130428	+	Silent	SNP	G	G	A	rs148057395	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004996.3	+1	reviewed	p.K259	0.965	54	0%	108	27.8%	9	77.7%	-	-	-	NULL
ABCC1	4363	genome.wustl.edu	37	16	16149977	16149977	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004996.3	+1	reviewed	p.R501Q	1.000	114	1.8%	184	37.5%	5	0%	probably_damaging(0.962)	deleterious(0)	deleterious(0.850)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC1	4363	genome.wustl.edu	37	16	16228314	16228314	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004996.3	+1	reviewed	p.I1358	0.940	44	0%	61	34.4%	26	23%	-	-	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCC6	368	genome.wustl.edu	37	16	16271483	16271483	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001171.5	-1	reviewed	p.T806A	1.000	137	0%	251	32.7%	0	-	benign(0.163)	deleterious(0.01)	neutral(0.420)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCC6	368	genome.wustl.edu	37	16	16281023	16281023	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001171.5	-1	reviewed	p.E609*	1.000	57	0%	91	41.8%	0	-	-	-	-	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC6	368	genome.wustl.edu	37	16	16302655	16302655	+	Nonsense_Mutation	SNP	C	C	A	rs72650697		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001171.5	-1	reviewed	p.E242*	0.898	104	0%	130	30%	0	-	-	-	-	NULL
NOMO3	408050	genome.wustl.edu	37	16	16346289	16346289	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004067.2	+1	reviewed	e9-1	1.000	458	0%	830	20.1%	0	-	-	-	-	-
XYLT1	64131	genome.wustl.edu	37	16	17235219	17235219	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022166.3	-1	reviewed	p.R460W	1.000	52	0%	70	35.7%	0	-	possibly_damaging(0.674)	deleterious(0)	deleterious(0.684)	HMMPfam_Branch
XYLT1	64131	genome.wustl.edu	37	16	17252767	17252767	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022166.3	-1	reviewed	e6-1	1.000	121	0%	149	36.9%	0	-	-	-	-	-
XYLT1	64131	genome.wustl.edu	37	16	17352928	17352928	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022166.3	-1	reviewed	p.R277H	1.000	62	1.6%	77	40.3%	2	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
ARL6IP1	23204	genome.wustl.edu	37	16	18809268	18809268	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015161.1	-1	provisional	p.R90I	1.000	98	0%	223	40.4%	196	45.9%	probably_damaging(0.983)	tolerated(0.15)	deleterious(0.670)	HMMPfam_Reticulon
SMG1	23049	genome.wustl.edu	37	16	18839478	18839478	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015092.4	-1	reviewed	p.D3206Y	1.000	158	0%	237	30.8%	8	62.5%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
SMG1	23049	genome.wustl.edu	37	16	18844442	18844442	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015092.4	-1	reviewed	p.R2871Q	1.000	111	0%	230	34.3%	3	0%	probably_damaging(0.995)	deleterious(0.04)	deleterious(0.806)	NULL
SMG1	23049	genome.wustl.edu	37	16	18847408	18847408	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015092.4	-1	reviewed	p.R2635H	1.000	87	0%	99	41.4%	6	66.6%	probably_damaging(0.998)	tolerated(0.16)	deleterious(0.534)	NULL
SMG1	23049	genome.wustl.edu	37	16	18858832	18858832	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015092.4	-1	reviewed	p.R1980Q	1.000	124	0%	258	32.6%	4	0%	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	NULL
SMG1	23049	genome.wustl.edu	37	16	18907500	18907500	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015092.4	-1	reviewed	p.E96K	1.000	178	0%	382	22.8%	2	0%	possibly_damaging(0.945)	tolerated(0.11)	deleterious(0.661)	NULL
TMC7	79905	genome.wustl.edu	37	16	19056743	19056743	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024847.3	+1	validated	p.F512	0.995	91	0%	178	32%	3	66.6%	-	-	-	HMMPfam_TMC
TMC5	79838	genome.wustl.edu	37	16	19509248	19509248	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105248.1	+1	validated	p.R994Q	0.997	155	0%	267	29.6%	3	66.6%	benign(0)	tolerated(0.63)	neutral(0.004)	NULL
CCP110	9738	genome.wustl.edu	37	16	19548204	19548204	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014711.4	+1	validated	p.E405*	0.994	109	0%	205	32.7%	3	0%	-	-	-	NULL
GPRC5B	51704	genome.wustl.edu	37	16	19883244	19883244	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016235.1	-1	reviewed	p.F308	0.984	72	0%	134	33.6%	14	71.4%	-	-	-	NULL
GPR139	124274	genome.wustl.edu	37	16	20043470	20043470	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002911.2	-1	validated	p.R217C	1.000	89	0%	204	35.3%	0	-	possibly_damaging(0.555)	deleterious(0.02)	deleterious(0.573)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ACSM2B	348158	genome.wustl.edu	37	16	20554317	20554317	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105069.1	-1	validated	p.S476	0.993	424	0%	489	26.8%	0	-	-	-	-	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ACSM2B	348158	genome.wustl.edu	37	16	20559407	20559407	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105069.1	-1	validated	p.E359*	1.000	142	0%	124	32.3%	0	-	-	-	-	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ACSM2B	348158	genome.wustl.edu	37	16	20559486	20559486	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105069.1	-1	validated	p.Q332H	0.101	173	0%	146	30.8%	0	-	benign(0.001)	tolerated(0.07)	neutral(0.319)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ACSM1	116285	genome.wustl.edu	37	16	20635481	20635481	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052956.2	-1	validated	p.Q528	0.989	223	0%	406	32.3%	1	100%	-	-	-	superfamily_Acetyl-CoA synthetase-like
THUMPD1	55623	genome.wustl.edu	37	16	20748276	20748276	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017736.3	-1	validated	p.E330*	0.856	335	0%	296	32.4%	7	28.5%	-	-	-	NULL
ERI2	112479	genome.wustl.edu	37	16	20802179	20802179	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080663.2	-1	validated	p.E270*	0.014	128	0%	158	38.6%	0	-	-	-	-	NULL
ERI2	112479	genome.wustl.edu	37	16	20810217	20810217	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142725.1	-1	validated	p.S302Y	0.072	138	0%	134	34.3%	2	50%	benign(0)	deleterious(0)	neutral(0.445)	NULL
LOC81691	81691	genome.wustl.edu	37	16	20838495	20838495	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030941.2	+1	validated	p.D313Y	0.953	106	0%	128	27.3%	1	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMSmart_SM00479,superfamily_Ribonuclease H-like,HMMPfam_Exonuc_X-T
LYRM1	57149	genome.wustl.edu	37	16	20935419	20935419	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128301.1	+1	validated	p.S117Y	1.000	85	0%	160	22.5%	13	53.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DNAH3	55567	genome.wustl.edu	37	16	20944750	20944750	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017539.1	-1	provisional	p.R4026H	1.000	200	1%	335	35.8%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Dynein_heavy
DNAH3	55567	genome.wustl.edu	37	16	20966352	20966352	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017539.1	-1	provisional	p.E3618D	1.000	153	0%	206	33.5%	1	0%	benign(0.002)	tolerated(0.73)	neutral(0.002)	HMMPfam_Dynein_heavy
DNAH3	55567	genome.wustl.edu	37	16	20974859	20974859	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017539.1	-1	provisional	p.I3449	1.000	87	0%	190	28.4%	0	-	-	-	-	HMMPfam_Dynein_heavy
DNAH3	55567	genome.wustl.edu	37	16	20975159	20975159	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017539.1	-1	provisional	p.I3349	1.000	58	0%	133	33.1%	0	-	-	-	-	NULL
DNAH3	55567	genome.wustl.edu	37	16	20975419	20975419	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017539.1	-1	provisional	p.L3263M	0.148	91	0%	186	37.1%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
DNAH3	55567	genome.wustl.edu	37	16	21011583	21011583	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017539.1	-1	provisional	p.F2128	0.980	119	0%	315	33.3%	0	-	-	-	-	HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH3	55567	genome.wustl.edu	37	16	21053447	21053447	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017539.1	-1	provisional	p.F1514V	1.000	178	0.6%	233	33%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH3	55567	genome.wustl.edu	37	16	21073923	21073923	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017539.1	-1	provisional	p.K1200N	1.000	135	0%	252	32.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_DHC_N2
DNAH3	55567	genome.wustl.edu	37	16	21078666	21078666	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017539.1	-1	provisional	p.L1152	0.415	119	0%	144	26.4%	0	-	-	-	-	HMMPfam_DHC_N2
DNAH3	55567	genome.wustl.edu	37	16	21147743	21147743	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017539.1	-1	provisional	p.S263Y	0.992	187	0%	367	34.3%	0	-	benign(0.275)	deleterious(0.04)	neutral(0.378)	NULL
DNAH3	55567	genome.wustl.edu	37	16	21156711	21156711	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017539.1	-1	provisional	p.S80N	1.000	112	0%	233	32.6%	0	-	probably_damaging(0.996)	tolerated(0.1)	deleterious(0.748)	NULL
IGSF6	10261	genome.wustl.edu	37	16	21658676	21658676	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005849.2	-1	validated	p.R69C	1.000	83	0%	136	33.8%	10	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
ENSG00000235406	0	genome.wustl.edu	37	16	21906909	21906909	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000457001	-1	known	p.F187L	1.000	76	0%	167	37.1%	19	0%	-	-	-	NULL
VWA3A	146177	genome.wustl.edu	37	16	22108241	22108241	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173615.3	+1	validated	p.E26*	0.025	212	0%	243	35.8%	0	-	-	-	-	NULL
VWA3A	146177	genome.wustl.edu	37	16	22111589	22111589	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173615.3	+1	validated	p.K100N	0.264	89	0%	99	21.2%	0	-	possibly_damaging(0.677)	deleterious(0.04)	deleterious(0.590)	NULL
VWA3A	146177	genome.wustl.edu	37	16	22111743	22111743	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173615.3	+1	validated	p.E119	0.080	155	0%	195	32.3%	0	-	-	-	-	NULL
VWA3A	146177	genome.wustl.edu	37	16	22126743	22126743	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173615.3	+1	validated	p.K255N	0.020	55	0%	93	36.6%	0	-	probably_damaging(0.992)	tolerated(0.35)	neutral(0.468)	superfamily_vWA-like
POLR3E	55718	genome.wustl.edu	37	16	22328358	22328358	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018119.2	+1	validated	p.E257D	1.000	62	0%	89	25.8%	25	36%	possibly_damaging(0.637)	tolerated(0.17)	neutral(0.282)	HMMPfam_Sin_N
SCNN1G	6340	genome.wustl.edu	37	16	23205491	23205491	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039.3	+1	reviewed	e4-1	0.972	131	0%	218	32.6%	0	-	-	-	-	-
SCNN1G	6340	genome.wustl.edu	37	16	23226490	23226490	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039.3	+1	reviewed	p.I550	0.160	153	0%	224	34.8%	0	-	-	-	-	HMMPfam_ASC
SCNN1B	6338	genome.wustl.edu	37	16	23391825	23391825	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000336.2	+1	reviewed	p.E542D	1.000	72	0%	106	40.6%	1	0%	probably_damaging(0.97)	deleterious(0)	deleterious(0.857)	HMMPfam_ASC
COG7	91949	genome.wustl.edu	37	16	23453819	23453819	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153603.3	-1	reviewed	p.A195T	0.501	76	0%	106	29.2%	10	40%	benign(0.001)	tolerated(0.1)	neutral(0.286)	HMMPfam_COG7
PALB2	79728	genome.wustl.edu	37	16	23614824	23614824	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024675.3	-1	reviewed	p.A1173S	1.000	100	0%	190	29.5%	22	40.9%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	superfamily_WD40_like
PALB2	79728	genome.wustl.edu	37	16	23647099	23647099	+	Silent	SNP	G	G	A	rs45487491		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024675.3	-1	reviewed	p.S256	0.000	103	0%	164	32.3%	4	50%	-	-	-	NULL
ERN2	10595	genome.wustl.edu	37	16	23716227	23716227	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033266.3	-1	validated	p.F325L	0.884	22	0%	17	29.4%	0	-	possibly_damaging(0.792)	tolerated(0.65)	neutral(0.300)	NULL
ERN2	10595	genome.wustl.edu	37	16	23717685	23717685	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033266.3	-1	validated	p.Y233*	1.000	103	0%	223	38.6%	0	-	-	-	-	superfamily_Quinoprotein alcohol dehydrogenase-like
PRKCB	5579	genome.wustl.edu	37	16	23847556	23847556	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002738.6	+1	reviewed	p.F20	0.999	54	0%	59	44.1%	0	-	-	-	-	superfamily_Cysteine-rich domain
CACNG3	10368	genome.wustl.edu	37	16	24366239	24366239	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006539.2	+1	reviewed	p.F127	1.000	100	0%	96	34.4%	0	-	-	-	-	HMMPfam_PMP22_Claudin
RBBP6	5930	genome.wustl.edu	37	16	24567634	24567634	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006910.4	+1	reviewed	p.K180N	1.000	108	0%	153	39.9%	7	14.2%	possibly_damaging(0.605)	tolerated(0.1)	deleterious(0.496)	superfamily_Retrovirus zinc finger-like domains
TNRC6A	27327	genome.wustl.edu	37	16	24741605	24741605	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014494.2	+1	reviewed	p.E13*	1.000	59	0%	148	25%	2	50%	-	-	-	NULL
TNRC6A	27327	genome.wustl.edu	37	16	24802773	24802773	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014494.2	+1	reviewed	p.S937L	0.994	42	0%	66	25.8%	4	25%	benign(0.111)	deleterious(0.02)	neutral(0.392)	NULL
TNRC6A	27327	genome.wustl.edu	37	16	24835087	24835087	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014494.2	+1	reviewed	p.L1950I	1.000	39	0%	54	24.1%	9	33.3%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
SLC5A11	115584	genome.wustl.edu	37	16	24909324	24909324	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000449109	+1	known	p.E168*	1.000	96	0%	144	29.2%	0	-	-	-	-	HMMPfam_SSF
ARHGAP17	55114	genome.wustl.edu	37	16	24942320	24942320	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006634.1	-1	validated	p.G767V	0.146	108	0%	210	30%	26	46.1%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
LCMT1	51451	genome.wustl.edu	37	16	25172517	25172517	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016309.2	+1	validated	p.M187I	1.000	68	0%	96	34.4%	82	46.3%	benign(0)	tolerated(0.65)	neutral(0.003)	HMMPfam_LCM,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
AQP8	343	genome.wustl.edu	37	16	25235696	25235696	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001169.2	+1	reviewed	p.E134V	0.199	136	0%	294	29.6%	0	-	possibly_damaging(0.561)	tolerated(0.24)	neutral(0.229)	HMMPfam_MIP,superfamily_MIP
HS3ST4	9951	genome.wustl.edu	37	16	25704251	25704251	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000331351	+1	known	p.L171	0.942	13	0.000	9	0.444	0	-	-	-	-	NULL
NSMCE1	197370	genome.wustl.edu	37	16	27236549	27236549	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145080.3	-1	validated	p.D244N	0.996	60	0%	78	41%	127	32.2%	benign(0)	tolerated(0.67)	neutral(0.003)	superfamily_SSF57850
KIAA0556	23247	genome.wustl.edu	37	16	27709696	27709696	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015202.2	+1	validated	p.L330I	0.000	23	0%	30	30%	3	66.6%	benign(0.001)	tolerated(0.93)	-	NULL
GSG1L	146395	genome.wustl.edu	37	16	27818830	27818830	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001109763.1	-1	validated	p.C292	0.991	120	0%	179	36.3%	0	-	-	-	-	NULL
GSG1L	146395	genome.wustl.edu	37	16	27895827	27895827	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001109763.1	-1	validated	p.A177D	0.999	105	0%	187	41.2%	0	-	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	NULL
XPO6	23214	genome.wustl.edu	37	16	28123303	28123303	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015171.2	-1	provisional	p.L726I	1.000	94	0%	174	31.6%	40	37.5%	probably_damaging(1)	tolerated(0.33)	deleterious(0.524)	superfamily_ARM repeat
APOBR	55911	genome.wustl.edu	37	16	28507205	28507205	+	Missense_Mutation	SNP	G	G	T	rs9745769		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018690.2	+1	reviewed	p.E281D	0.000	53	0%	184	27.2%	3	0%	possibly_damaging(0.857)	deleterious(0)	deleterious(0.776)	NULL
SH2B1	25970	genome.wustl.edu	37	16	28883924	28883924	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015503.2	+1	reviewed	p.D599N	1.000	80	0%	167	31.7%	52	34.6%	benign(0.408)	deleterious(0)	deleterious(0.577)	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain
ATP2A1	487	genome.wustl.edu	37	16	28912088	28912088	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173201.2	+1	reviewed	p.R651C	0.656	43	0%	79	34.2%	2	100%	benign(0.001)	tolerated(0.05)	neutral(0.345)	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Calcium ATPase transmembrane domain M
CD19	930	genome.wustl.edu	37	16	28944746	28944746	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001770.5	+1	reviewed	p.A251T	0.501	78	0%	115	26.1%	1	0%	possibly_damaging(0.93)	deleterious(0.02)	deleterious(0.760)	HMMSmart_IG,superfamily_SSF48726
CD19	930	genome.wustl.edu	37	16	28946817	28946817	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001770.5	+1	reviewed	p.T296	0.083	311	0%	544	32.4%	1	0%	-	-	-	NULL
LOC728888	728888	genome.wustl.edu	37	16	29394358	29394358	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343430.1	-1	model	p.R632H	0.114	39	0%	79	34.2%	1	0%	possibly_damaging(0.774)	tolerated(0.1)	deleterious(0.575)	NULL
MVP	9961	genome.wustl.edu	37	16	29853120	29853120	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005115.3	+1	reviewed	p.N465	0.079	22	0%	48	39.6%	51	15.6%	-	-	-	NULL
SEZ6L2	26470	genome.wustl.edu	37	16	29883759	29883759	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201575.2	-1	validated	p.L859	0.998	46	0%	82	29.3%	394	50.2%	-	-	-	NULL
SEZ6L2	26470	genome.wustl.edu	37	16	29906661	29906661	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_201575.2	-1	validated	p.R258W	1.000	43	0%	95	29.5%	112	46.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
INO80E	283899	genome.wustl.edu	37	16	30016649	30016649	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173618.1	+1	provisional	p.K207N	1.000	13	0%	14	42.9%	14	28.5%	possibly_damaging(0.85)	deleterious(0.05)	deleterious(0.672)	NULL
DOC2A	8448	genome.wustl.edu	37	16	30017974	30017974	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003586.2	-1	reviewed	p.K301N	1.000	247	0%	595	33.6%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
DCTPP1	79077	genome.wustl.edu	37	16	30435671	30435671	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024096.1	-1	provisional	p.H132Q	0.365	56	0%	117	30.8%	105	30.4%	benign(0.008)	tolerated(0.22)	neutral(0.042)	HMMPfam_MazG,superfamily_SSF101386
ITGAL	3683	genome.wustl.edu	37	16	30492874	30492874	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002209.2	+1	reviewed	p.T231A	1.000	100	0%	267	34.8%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like,superfamily_Integrin alpha N-terminal domain
ZNF785	146540	genome.wustl.edu	37	16	30594596	30594596	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152458.5	-1	provisional	p.R168Q	0.000	57	1.8%	110	34.5%	9	55.5%	possibly_damaging(0.886)	tolerated(0.34)	neutral(0.369)	superfamily_C2H2 and C2HC zinc fingers
PHKG2	5261	genome.wustl.edu	37	16	30762462	30762462	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000294.2	+1	reviewed	p.R44Q	1.000	83	0%	143	32.2%	38	47.3%	probably_damaging(0.976)	deleterious(0.01)	deleterious(0.824)	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
C16orf93	90835	genome.wustl.edu	37	16	30770761	30770761	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001014979.1	-1	predicted	p.D150N	0.945	101	0%	155	33.5%	5	60%	benign(0.01)	tolerated(0.78)	neutral(0.002)	NULL
ZNF646	9726	genome.wustl.edu	37	16	31094408	31094408	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014699.3	+1	validated	p.L1832I	1.000	66	0%	122	33.6%	16	18.7%	possibly_damaging(0.921)	deleterious(0)	deleterious(0.816)	NULL
ITGAM	3684	genome.wustl.edu	37	16	31273069	31273069	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000632.3	+1	reviewed	p.E29*	0.001	80	0%	188	34.6%	0	-	-	-	-	superfamily_SSF69318
ITGAD	3681	genome.wustl.edu	37	16	31405651	31405651	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005353.2	+1	validated	p.F42	0.597	109	0%	204	36.3%	3	33.3%	-	-	-	HMMSmart_SM00191,superfamily_Integrin alpha N-terminal domain
ITGAD	3681	genome.wustl.edu	37	16	31421750	31421750	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005353.2	+1	validated	p.S373I	0.005	115	0%	208	28.8%	0	-	possibly_damaging(0.604)	deleterious(0)	deleterious(0.654)	superfamily_Integrin alpha N-terminal domain
ITGAD	3681	genome.wustl.edu	37	16	31434441	31434441	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005353.2	+1	validated	p.E929D	0.992	105	0%	178	35.4%	0	-	benign(0.031)	tolerated(0.11)	neutral(0.273)	HMMPfam_Integrin_alpha2
ARMC5	79798	genome.wustl.edu	37	16	31473811	31473811	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105247.1	+1	validated	p.R315W	0.969	54	0%	80	31.2%	7	14.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00185,superfamily_ARM repeat
TGFB1I1	7041	genome.wustl.edu	37	16	31485262	31485262	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042454.2	+1	reviewed	p.L97F	1.000	54	0%	77	27.3%	16	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ZNF720	124411	genome.wustl.edu	37	16	31765419	31765419	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000398696	+1	known	p.N117H	0.002	10	0%	10	40%	1	100%	benign(0.04)	deleterious(0.03)	neutral(0.367)	NULL
ZNF267	10308	genome.wustl.edu	37	16	31895849	31895849	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003414.4	+1	validated	p.E12*	0.285	178	0%	218	29.4%	4	50%	-	-	-	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF267	10308	genome.wustl.edu	37	16	31926190	31926190	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003414.4	+1	validated	p.R207Q	0.023	53	0%	45	51.1%	4	25%	benign(0)	tolerated(0.52)	neutral(0.009)	NULL
LOC729264	729264	genome.wustl.edu	37	16	32264816	32264816	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001133674.2	+1	model	p.R48C	0.483	310	0%	404	13.9%	0	-	-	-	-	NULL
LOC401847	401847	genome.wustl.edu	37	16	33605679	33605679	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001718104.2	+1	model	p.A116	0.951	120	0%	135	20.7%	0	-	-	-	-	HMMSmart_SM00406,HMMPfam_V-set,superfamily_Immunoglobulin
ENSG00000200434	0	genome.wustl.edu	37	16	33965525	33965525	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000363564	+1	novel	NULL	1.000	76	0%	94	20.2%	0	-	-	-	-	-
ENSG00000214581	0	genome.wustl.edu	37	16	34681604	34681604	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000398617	-1	known	p.E81K	0.995	36	0%	29	27.6%	0	-	possibly_damaging(0.609)	tolerated(0.93)	neutral(0.211)	NULL
ENSG00000214581	0	genome.wustl.edu	37	16	34681713	34681713	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000398617	-1	known	p.I44M	0.000	36	0%	17	35.3%	0	-	possibly_damaging(0.675)	tolerated(0.1)	deleterious(0.526)	NULL
LOC100130700	100130700	genome.wustl.edu	37	16	34739755	34739755	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_078680.1	-1	model	NULL	0.001	379	0%	357	14.8%	1	0%	-	-	-	-
SHCBP1	79801	genome.wustl.edu	37	16	46633778	46633778	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024745.4	-1	validated	p.K437T	1.000	167	0%	236	30.9%	5	20%	benign(0.319)	tolerated(0.9)	neutral(0.100)	HMMSmart_SM00710,superfamily_Pectin lyase-like
SHCBP1	79801	genome.wustl.edu	37	16	46637895	46637895	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024745.4	-1	validated	p.E362*	0.998	24	0%	38	36.8%	5	0%	-	-	-	NULL
VPS35	55737	genome.wustl.edu	37	16	46696196	46696196	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018206.4	-1	reviewed	p.L676I	1.000	135	0%	232	34.1%	115	40%	benign(0.201)	deleterious(0.04)	neutral(0.368)	HMMPfam_Vps35
MYLK3	91807	genome.wustl.edu	37	16	46782049	46782049	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182493.2	-1	validated	p.K19N	0.810	50	0%	98	29.6%	0	-	benign(0.323)	deleterious(0.03)	neutral(0.466)	NULL
DNAJA2	10294	genome.wustl.edu	37	16	46991120	46991120	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005880.3	-1	reviewed	p.L354I	1.000	114	0%	190	37.9%	80	51.2%	benign(0.006)	tolerated(0.52)	neutral(0.009)	HMMPfam_DnaJ_C
PHKB	5257	genome.wustl.edu	37	16	47730390	47730390	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000293.2	+1	reviewed	p.I998	0.008	169	0%	214	29.4%	28	46.4%	-	-	-	HMMPfam_PHK_AB
ABCC12	94160	genome.wustl.edu	37	16	48138226	48138226	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033226.2	-1	reviewed	p.M909I	1.000	141	0%	201	29.9%	0	-	benign(0.123)	tolerated(0.13)	neutral(0.263)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC11	85320	genome.wustl.edu	37	16	48201483	48201483	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032583.3	-1	reviewed	p.C1327F	1.000	116	0%	147	29.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCC11	85320	genome.wustl.edu	37	16	48218513	48218513	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032583.3	-1	reviewed	p.Q1032H	0.011	155	0%	203	37.9%	0	-	benign(0.001)	tolerated(0.08)	neutral(0.300)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC11	85320	genome.wustl.edu	37	16	48245055	48245055	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032583.3	-1	reviewed	p.S471I	0.114	96	0%	122	35.2%	0	-	possibly_damaging(0.776)	tolerated(0.06)	deleterious(0.612)	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC11	85320	genome.wustl.edu	37	16	48249171	48249171	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032583.3	-1	reviewed	p.L346I	0.995	205	0%	229	33.2%	1	0%	probably_damaging(0.964)	deleterious(0)	deleterious(0.851)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
ABCC11	85320	genome.wustl.edu	37	16	48258332	48258332	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032583.3	-1	reviewed	p.R135H	0.012	90	0%	117	27.4%	0	-	possibly_damaging(0.931)	tolerated(0.07)	deleterious(0.697)	NULL
LONP2	83752	genome.wustl.edu	37	16	48385567	48385567	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031490.2	+1	provisional	p.E805*	1.000	76	0%	144	34%	32	31.2%	-	-	-	HMMPfam_Lon_C,superfamily_Ribosomal_S5_D2-typ_fold
N4BP1	9683	genome.wustl.edu	37	16	48595554	48595554	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153029.3	-1	validated	p.L334V	0.003	97	0%	109	39.4%	8	62.5%	possibly_damaging(0.596)	tolerated(0.21)	neutral(0.250)	NULL
CBLN1	869	genome.wustl.edu	37	16	49313428	49313428	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004352.3	-1	validated	p.V157F	1.000	129	0%	173	37.6%	2	50%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	HMMPfam_C1q,HMMSmart_SM00110,superfamily_TNF-like
C16orf78	123970	genome.wustl.edu	37	16	49407855	49407855	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144602.2	+1	predicted	p.S2*	0.000	117	0%	212	40.6%	0	-	-	-	-	NULL
C16orf78	123970	genome.wustl.edu	37	16	49430390	49430390	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144602.2	+1	predicted	p.R151S	0.003	120	0%	176	30.1%	0	-	benign(0.325)	deleterious(0)	deleterious(0.546)	NULL
ZNF423	23090	genome.wustl.edu	37	16	49670466	49670466	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015069.2	-1	reviewed	p.P866H	0.996	102	0%	133	32.3%	12	58.3%	benign(0.001)	tolerated(0.21)	neutral(0.044)	NULL
ZNF423	23090	genome.wustl.edu	37	16	49670875	49670875	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015069.2	-1	reviewed	p.D730N	1.000	139	0%	173	31.2%	11	18.1%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2
ZNF423	23090	genome.wustl.edu	37	16	49671499	49671499	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015069.2	-1	reviewed	p.C522R	1.000	177	0%	365	32.6%	8	87.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2
ZNF423	23090	genome.wustl.edu	37	16	49764798	49764798	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015069.2	-1	reviewed	p.R54K	1.000	334	0%	409	29.3%	4	50%	benign(0.028)	tolerated(0.06)	neutral(0.324)	NULL
BRD7	29117	genome.wustl.edu	37	16	50353169	50353169	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013263.3	-1	validated	p.E637*	1.000	123	0%	206	30.6%	113	17.6%	-	-	-	NULL
NKD1	85407	genome.wustl.edu	37	16	50666255	50666255	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033119.3	+1	provisional	p.I253	0.346	105	0%	120	30.8%	55	58.1%	-	-	-	NULL
NOD2	64127	genome.wustl.edu	37	16	50744482	50744482	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022162.1	+1	reviewed	p.K220	0.960	91	0%	134	30.6%	0	-	-	-	-	NULL
NOD2	64127	genome.wustl.edu	37	16	50744798	50744798	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022162.1	+1	reviewed	p.L326I	0.261	43	0%	48	29.2%	0	-	probably_damaging(0.992)	tolerated(0.3)	deleterious(0.476)	HMMPfam_NACHT,superfamily_P-loop containing nucleoside triphosphate hydrolases
NOD2	64127	genome.wustl.edu	37	16	50745143	50745143	+	Missense_Mutation	SNP	G	G	A	rs104895432	byCluster;byFrequency	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022162.1	+1	reviewed	p.E441K	0.671	30	0%	33	45.5%	0	-	probably_damaging(1)	tolerated(0.64)	deleterious(0.503)	HMMPfam_NACHT,superfamily_P-loop containing nucleoside triphosphate hydrolases
CYLD	1540	genome.wustl.edu	37	16	50788328	50788328	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015247.2	+1	reviewed	p.I302	0.998	373	0%	341	29.6%	6	50%	-	-	-	HMMPfam_CAP_GLY,superfamily_Cap-Gly domain
CYLD	1540	genome.wustl.edu	37	16	50818327	50818327	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015247.2	+1	reviewed	p.E638	1.000	221	0.9%	291	32.3%	6	66.6%	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
SALL1	6299	genome.wustl.edu	37	16	51172912	51172912	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002968.2	-1	reviewed	p.A1074V	0.984	175	0%	267	35.6%	71	43.6%	benign(0.032)	tolerated(0.08)	neutral(0.301)	NULL
TOX3	27324	genome.wustl.edu	37	16	52478261	52478261	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080430.2	-1	reviewed	p.K305T	1.000	238	0%	146	30.8%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HMG_box,HMMSmart_HMG,superfamily_HMG-box
TOX3	27324	genome.wustl.edu	37	16	52479986	52479986	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080430.2	-1	reviewed	p.Q276*	1.000	335	0%	281	35.2%	0	-	-	-	-	HMMPfam_HMG_box,HMMSmart_HMG,superfamily_HMG-box
CHD9	80205	genome.wustl.edu	37	16	53337880	53337880	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025134.4	+1	validated	p.R1988C	1.000	103	0%	234	34.6%	1	0%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
CHD9	80205	genome.wustl.edu	37	16	53358202	53358202	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025134.4	+1	validated	p.G2681S	0.279	56	0%	85	34.1%	4	25%	unknown(0)	tolerated(0.06)	-	NULL
CHD9	80205	genome.wustl.edu	37	16	53358256	53358256	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025134.4	+1	validated	p.L2699	1.000	56	0%	84	39.3%	4	50%	-	-	-	NULL
LOC643802	643802	genome.wustl.edu	37	16	53404710	53404710	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001719265.1	-1	model	p.F126L	1.000	51	0%	57	21.1%	0	-	-	-	-	HMMPfam_Mpp10
RPGRIP1L	23322	genome.wustl.edu	37	16	53679623	53679623	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015272.2	-1	reviewed	p.F866S	1.000	191	0%	256	31.6%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
RPGRIP1L	23322	genome.wustl.edu	37	16	53686795	53686795	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015272.2	-1	reviewed	p.R602*	1.000	98	0%	136	31.6%	1	0%	-	-	-	NULL
RPGRIP1L	23322	genome.wustl.edu	37	16	53705430	53705430	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015272.2	-1	reviewed	p.L365	0.973	308	0%	312	34.9%	1	100%	-	-	-	NULL
RPGRIP1L	23322	genome.wustl.edu	37	16	53720482	53720482	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015272.2	-1	reviewed	p.N213	1.000	235	0%	134	28.4%	1	100%	-	-	-	NULL
FTO	79068	genome.wustl.edu	37	16	53859803	53859803	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080432.2	+1	reviewed	p.L51I	0.906	41	0%	35	34.3%	5	40%	benign(0.119)	tolerated(0.11)	neutral(0.281)	NULL
FTO	79068	genome.wustl.edu	37	16	53913822	53913822	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080432.2	+1	reviewed	p.D348N	0.017	288	0%	444	34.7%	7	57.1%	benign(0.058)	tolerated(0.18)	neutral(0.060)	NULL
FTO	79068	genome.wustl.edu	37	16	53922747	53922747	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080432.2	+1	reviewed	p.E375K	1.000	255	0%	376	34.3%	12	25%	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
MMP2	4313	genome.wustl.edu	37	16	55523651	55523651	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004530.4	+1	reviewed	p.S365	0.028	55	0%	70	38.6%	271	0.7%	-	-	-	HMMPfam_fn2,HMMSmart_FN2,PatternScan_FN2_1,HMMPfam_Peptidase_M10,HMMSmart_ZnMc,superfamily_Kringle-like,superfamily_SSF55486
MMP2	4313	genome.wustl.edu	37	16	55539335	55539335	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004530.4	+1	reviewed	p.S655F	0.030	176	0%	217	30.9%	300	4.3%	possibly_damaging(0.865)	tolerated(0.58)	neutral(0.340)	superfamily_Hemopexin,HMMPfam_Hemopexin,HMMSmart_HX
LPCAT2	54947	genome.wustl.edu	37	16	55562317	55562317	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017839.4	+1	reviewed	p.L114M	1.000	269	0%	237	35%	1	0%	possibly_damaging(0.45)	tolerated(0.17)	neutral(0.206)	superfamily_Glycerol-3-phosphate (1)-acyltransferase
LPCAT2	54947	genome.wustl.edu	37	16	55613065	55613065	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017839.4	+1	reviewed	p.F453L	0.663	260	0%	172	36%	1	0%	benign(0.002)	tolerated(0.79)	neutral(0.001)	HMMSmart_SM00054,PatternScan_EF_HAND_1,HMMPfam_efhand,superfamily_EF-hand
SLC6A2	6530	genome.wustl.edu	37	16	55703504	55703504	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001043.3	+1	reviewed	p.F101S	1.000	77	0%	68	32.4%	0	-	possibly_damaging(0.943)	deleterious(0)	deleterious(0.832)	HMMPfam_SNF
CES1	1066	genome.wustl.edu	37	16	55846938	55846938	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025195.1	-1	reviewed	p.G321	0.000	137	0%	178	35.4%	1	0%	-	-	-	HMMPfam_COesterase,superfamily_SSF53474
CES5A	221223	genome.wustl.edu	37	16	55903656	55903656	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143685.1	-1	validated	p.V140I	1.000	67	0%	68	30.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases
GNAO1	2775	genome.wustl.edu	37	16	56370697	56370697	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020988.2	+1	validated	p.F216L	0.790	62	0%	89	34.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
GNAO1	2775	genome.wustl.edu	37	16	56388909	56388909	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020988.2	+1	validated	p.D337N	1.000	133	0%	205	31.7%	0	-	benign(0.005)	tolerated(0.06)	neutral(0.323)	HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
AMFR	267	genome.wustl.edu	37	16	56423100	56423100	+	Missense_Mutation	SNP	C	C	T	rs62035982		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144.4	-1	reviewed	p.D425N	1.000	154	0%	222	38.7%	26	50%	possibly_damaging(0.779)	tolerated(0.3)	neutral(0.320)	NULL
AMFR	267	genome.wustl.edu	37	16	56436932	56436932	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144.4	-1	reviewed	p.K313N	1.000	99	0%	252	28.2%	44	29.5%	benign(0.196)	tolerated(0.18)	neutral(0.074)	NULL
AMFR	267	genome.wustl.edu	37	16	56436948	56436948	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144.4	-1	reviewed	p.R308Q	1.000	101	0%	254	31.9%	44	25%	possibly_damaging(0.563)	tolerated(0.16)	neutral(0.252)	NULL
SLC12A3	6559	genome.wustl.edu	37	16	56901107	56901107	+	Silent	SNP	C	C	T	rs142561570	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000339.2	+1	reviewed	p.F136	0.934	81	0%	188	28.7%	0	-	-	-	-	NULL
SLC12A3	6559	genome.wustl.edu	37	16	56920909	56920909	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000339.2	+1	reviewed	p.N694	0.004	39	0%	77	33.8%	0	-	-	-	-	NULL
CETP	1071	genome.wustl.edu	37	16	57007266	57007266	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000078.2	+1	reviewed	p.V258	0.113	61	0%	159	35.2%	0	-	-	-	-	HMMPfam_LBP_BPI_CETP_C,HMMSmart_SM00328,superfamily_Bactericidal permeability-increasing protein BPI
NLRC5	84166	genome.wustl.edu	37	16	57070056	57070056	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032206.3	+1	validated	p.A891V	0.666	25	0%	63	39.7%	4	0%	possibly_damaging(0.489)	tolerated(0.1)	neutral(0.449)	HMMSmart_SM00368,HMMSmart_SM00367,superfamily_RNI-like
NLRC5	84166	genome.wustl.edu	37	16	57115448	57115448	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032206.3	+1	validated	p.K1805N	0.996	118	0%	222	23%	3	0%	probably_damaging(0.961)	tolerated(0.1)	deleterious(0.691)	HMMSmart_SM00368,superfamily_RNI-like
CPNE2	221184	genome.wustl.edu	37	16	57153147	57153147	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152727.4	+1	reviewed	p.K183R	1.000	115	0%	239	38.5%	12	16.6%	benign(0.328)	tolerated(1)	neutral(0.103)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
DOK4	55715	genome.wustl.edu	37	16	57508716	57508716	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018110.3	-1	validated	p.F196	0.992	73	0%	127	33.1%	8	25%	-	-	-	HMMPfam_IRS,HMMSmart_PTBI,superfamily_SSF50729
CCDC135	84229	genome.wustl.edu	37	16	57756927	57756927	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032269.5	+1	validated	p.L474F	0.984	45	0%	100	37%	0	-	possibly_damaging(0.775)	tolerated(0.12)	deleterious(0.549)	NULL
CCDC135	84229	genome.wustl.edu	37	16	57760192	57760192	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032269.5	+1	validated	p.F657	0.967	24	0%	42	28.6%	0	-	-	-	-	NULL
CCDC135	84229	genome.wustl.edu	37	16	57760807	57760807	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032269.5	+1	validated	p.R680G	0.000	89	0%	199	28.1%	0	-	benign(0.026)	tolerated(0.15)	neutral(0.242)	NULL
CCDC135	84229	genome.wustl.edu	37	16	57764958	57764958	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032269.5	+1	validated	p.R836H	1.000	101	0%	166	33.7%	1	100%	probably_damaging(0.999)	tolerated(0.45)	deleterious(0.502)	NULL
KATNB1	10300	genome.wustl.edu	37	16	57789048	57789048	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005886.2	+1	reviewed	p.R438	0.270	48	0%	39	33.3%	68	38.2%	-	-	-	NULL
CNGB1	1258	genome.wustl.edu	37	16	57950054	57950054	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001297.4	-1	reviewed	p.Y732	1.000	131	0%	195	33.8%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
C16orf57	79650	genome.wustl.edu	37	16	58036536	58036536	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024598.2	+1	validated	p.H84	0.815	29	0%	35	28.6%	25	52%	-	-	-	HMMPfam_HVSL
CNOT1	23019	genome.wustl.edu	37	16	58589408	58589408	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016284.3	-1	validated	p.T880A	1.000	123	0%	184	30.4%	13	69.2%	benign(0.026)	tolerated(0.28)	neutral(0.033)	NULL
CDH8	1006	genome.wustl.edu	37	16	61761184	61761184	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000394178	-1	known	p.E365*	0.000	81	0%	30	33.3%	0	-	-	-	-	HMMSmart_CA,superfamily_Cadherin
CDH8	1006	genome.wustl.edu	37	16	61854949	61854949	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001796.2	-1	reviewed	p.D302Y	1.000	191	0%	113	33.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
CDH11	1009	genome.wustl.edu	37	16	65038644	65038644	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001797.2	-1	reviewed	p.K43N	0.974	45	0%	36	16.7%	12	0%	probably_damaging(0.991)	tolerated(0.13)	deleterious(0.697)	NULL
CDH5	1003	genome.wustl.edu	37	16	66424438	66424438	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001795.3	+1	reviewed	p.A305V	1.000	112	0%	155	29.7%	9	0%	benign(0.001)	tolerated(0.49)	neutral(0.011)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
TK2	7084	genome.wustl.edu	37	16	66545928	66545928	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004614.4	-1	reviewed	p.L289	1.000	219	0%	446	30%	9	44.4%	-	-	-	HMMPfam_dNK
CMTM2	146225	genome.wustl.edu	37	16	66621857	66621857	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144673.2	+1	reviewed	p.I194	0.002	125	0%	201	33.8%	1	100%	-	-	-	HMMPfam_MARVEL
CCDC79	283847	genome.wustl.edu	37	16	66793160	66793160	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136505.1	-1	provisional	p.R605Q	1.000	207	0%	393	32.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CCDC79	283847	genome.wustl.edu	37	16	66801342	66801342	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136505.1	-1	provisional	p.E586K	0.973	142	0%	181	28.2%	0	-	benign(0)	tolerated(1)	-	NULL
CDH16	1014	genome.wustl.edu	37	16	66948188	66948188	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004062.2	-1	reviewed	p.T237	0.986	124	1.6%	174	10.3%	0	-	-	-	-	HMMSmart_SM00112
CES4A	283848	genome.wustl.edu	37	16	67029727	67029727	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173815.4	+1	validated	p.P85	0.000	68	0%	107	34.6%	0	-	-	-	-	HMMPfam_COesterase,superfamily_SSF53474
C16orf70	80262	genome.wustl.edu	37	16	67154071	67154071	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025187.3	+1	provisional	p.N41Y	1.000	141	0%	353	36.3%	7	0%	probably_damaging(0.97)	tolerated(0.05)	deleterious(0.758)	HMMPfam_UPF0183
C16orf70	80262	genome.wustl.edu	37	16	67168322	67168322	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025187.3	+1	provisional	p.R205*	1.000	150	0%	280	33.9%	7	28.5%	-	-	-	HMMPfam_UPF0183
C16orf70	80262	genome.wustl.edu	37	16	67178214	67178214	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025187.3	+1	provisional	p.A299	0.676	129	0%	246	32.1%	8	37.5%	-	-	-	HMMPfam_UPF0183
B3GNT9	84752	genome.wustl.edu	37	16	67183690	67183690	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033309.2	-1	validated	p.F233	0.419	16	0%	35	40%	2	0%	-	-	-	HMMPfam_Galactosyl_T
HSF4	3299	genome.wustl.edu	37	16	67201447	67201447	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040667.2	+1	reviewed	p.E267*	0.993	75	0%	108	29.6%	4	50%	-	-	-	NULL
NOL3	8996	genome.wustl.edu	37	16	67208825	67208825	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000445652	+1	known	p.S196L	0.000	42	0%	62	22.6%	3	0%	-	-	-	NULL
KIAA0895L	653319	genome.wustl.edu	37	16	67214049	67214049	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040715.1	-1	validated	p.F155L	1.000	150	0.7%	242	32.2%	4	25%	possibly_damaging(0.942)	deleterious(0)	deleterious(0.832)	NULL
ELMO3	79767	genome.wustl.edu	37	16	67236848	67236848	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024712.3	+1	reviewed	p.R592H	1.000	49	0%	45	35.6%	9	44.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF50729
KCTD19	146212	genome.wustl.edu	37	16	67327780	67327780	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100915.1	-1	provisional	p.A629T	1.000	156	0%	288	43.4%	0	-	benign(0)	deleterious(0.03)	neutral(0.364)	NULL
KCTD19	146212	genome.wustl.edu	37	16	67335813	67335813	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100915.1	-1	provisional	p.R219H	1.000	114	0%	166	29.5%	0	-	probably_damaging(0.999)	tolerated(0.24)	deleterious(0.528)	superfamily_BTB/POZ_fold
KCTD19	146212	genome.wustl.edu	37	16	67338337	67338337	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100915.1	-1	provisional	p.S146	1.000	148	0.7%	254	36.6%	0	-	-	-	-	NULL
LRRC36	55282	genome.wustl.edu	37	16	67401050	67401050	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018296.5	+1	validated	p.K295N	0.002	138	0%	192	31.8%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
ZDHHC1	29800	genome.wustl.edu	37	16	67432744	67432744	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013304.2	-1	validated	p.R212C	0.998	105	0%	147	29.9%	19	21%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RLTPR	146206	genome.wustl.edu	37	16	67688120	67688120	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013838.1	+1	provisional	p.F1063L	1.000	40	0%	68	29.4%	0	-	possibly_damaging(0.444)	deleterious(0)	deleterious(0.590)	NULL
TSNAXIP1	55815	genome.wustl.edu	37	16	67860617	67860617	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018430.2	+1	validated	p.F421C	1.000	101	1%	214	33.2%	6	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
CENPT	80152	genome.wustl.edu	37	16	67866397	67866397	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025082.3	-1	validated	p.Q54	0.958	81	0%	113	28.3%	16	56.2%	-	-	-	NULL
PSMB10	5699	genome.wustl.edu	37	16	67970607	67970607	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002801.2	-1	reviewed	p.N16D	0.998	21	0%	41	36.6%	17	5.8%	benign(0.01)	deleterious(0.02)	neutral(0.384)	superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)
LCAT	3931	genome.wustl.edu	37	16	67976354	67976354	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000229.1	-1	reviewed	p.Q220H	1.000	42	0%	76	30.3%	10	40%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_LACT,superfamily_alpha/beta-Hydrolases
NFATC3	4775	genome.wustl.edu	37	16	68208402	68208402	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173165.1	+1	reviewed	p.L634I	1.000	99	0%	153	26.8%	13	38.4%	benign(0.001)	tolerated(0.18)	neutral(0.056)	HMMPfam_TIG,HMMSmart_SM00429,superfamily_E set domains
SMPD3	55512	genome.wustl.edu	37	16	68397678	68397678	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018667.3	-1	validated	e4+2	1.000	52	1.9%	77	42.9%	0	-	-	-	-	-
ZFP90	146198	genome.wustl.edu	37	16	68598492	68598492	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000327567	+1	known	p.E74*	1.000	74	0%	119	39.5%	8	37.5%	-	-	-	NULL
CDH1	999	genome.wustl.edu	37	16	68842325	68842325	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004360.3	+1	reviewed	e4-2	0.965	127	0%	212	22.6%	0	-	-	-	-	-
CDH1	999	genome.wustl.edu	37	16	68842735	68842735	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004360.3	+1	reviewed	p.R224H	0.000	66	0%	131	32.1%	70	5.7%	benign(0)	tolerated(0.24)	neutral(0.037)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
TMCO7	79613	genome.wustl.edu	37	16	68901033	68901033	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024562.1	+1	validated	p.R302W	1.000	122	0%	270	39.3%	4	25%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
TMED6	146456	genome.wustl.edu	37	16	69377325	69377325	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144676.3	-1	validated	p.K236N	0.044	191	0%	343	34.4%	0	-	benign(0.086)	tolerated(0.34)	neutral(0.029)	NULL
NFAT5	10725	genome.wustl.edu	37	16	69689635	69689635	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138713.2	+1	reviewed	p.E377*	1.000	101	0%	223	29.6%	1	0%	-	-	-	superfamily_p53-like transcription factors,HMMPfam_RHD
NFAT5	10725	genome.wustl.edu	37	16	69726957	69726957	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138713.2	+1	reviewed	p.N1077H	0.983	69	0%	111	37.8%	3	33.3%	possibly_damaging(0.716)	deleterious(0.01)	deleterious(0.665)	NULL
NFAT5	10725	genome.wustl.edu	37	16	69727274	69727274	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138713.2	+1	reviewed	p.P1182	1.000	111	0%	276	30.8%	2	0%	-	-	-	NULL
NQO1	1728	genome.wustl.edu	37	16	69745102	69745102	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000903.2	-1	reviewed	p.R201Q	0.997	144	0%	236	36%	508	52.7%	probably_damaging(1)	tolerated(0.29)	deleterious(0.529)	HMMPfam_Flavodoxin_2,superfamily_Flavoproteins
NQO1	1728	genome.wustl.edu	37	16	69748892	69748892	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000903.2	-1	reviewed	p.A131V	0.962	105	1%	276	24.3%	334	35.9%	benign(0.01)	tolerated(0.17)	neutral(0.059)	HMMPfam_Flavodoxin_2,superfamily_Flavoproteins
WWP2	11060	genome.wustl.edu	37	16	69965095	69965095	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007014.3	+1	reviewed	p.R496W	0.997	144	0.7%	293	32.4%	25	20%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_HECT
WWP2	11060	genome.wustl.edu	37	16	69965465	69965465	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007014.3	+1	reviewed	p.F525	1.000	47	0%	76	34.2%	21	19%	-	-	-	superfamily_HECT
WWP2	11060	genome.wustl.edu	37	16	69973017	69973017	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007014.3	+1	reviewed	p.E811K	1.000	119	0%	180	34.4%	39	46.1%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT
ENSG00000205152	0	genome.wustl.edu	37	16	70263681	70263681	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000378955	-1	known	p.L474I	1.000	192	0%	410	25.9%	1	0%	-	-	-	NULL
ENSG00000205152	0	genome.wustl.edu	37	16	70265903	70265903	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000378955	-1	known	p.W285C	1.000	48	0%	97	29.9%	3	100%	-	-	-	NULL
ENSG00000205152	0	genome.wustl.edu	37	16	70266675	70266675	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000378955	-1	known	p.S212Y	1.000	108	0%	152	23.7%	0	-	-	-	-	NULL
DDX19A	55308	genome.wustl.edu	37	16	70405369	70405369	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018332.3	+1	provisional	p.I426	0.939	160	0.6%	395	21.5%	51	25.4%	-	-	-	HMMPfam_Helicase_C,HMMSmart_SM00490,superfamily_P-loop containing nucleoside triphosphate hydrolases
SF3B3	23450	genome.wustl.edu	37	16	70562790	70562790	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012426.4	+1	reviewed	p.E29*	1.000	86	0%	128	30.5%	20	20%	-	-	-	NULL
SF3B3	23450	genome.wustl.edu	37	16	70572255	70572255	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012426.4	+1	reviewed	p.M285I	1.000	183	0%	376	30.1%	31	16.1%	benign(0.001)	tolerated(0.47)	neutral(0.011)	NULL
SF3B3	23450	genome.wustl.edu	37	16	70601317	70601317	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012426.4	+1	reviewed	p.P944S	1.000	218	0%	472	29.2%	56	60.7%	benign(0.019)	tolerated(0.28)	neutral(0.033)	HMMPfam_CPSF_A
VAC14	55697	genome.wustl.edu	37	16	70778447	70778447	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018052.3	-1	validated	p.I469	0.975	42	0%	67	37.3%	50	44%	-	-	-	superfamily_ARM-type_fold
HYDIN	54768	genome.wustl.edu	37	16	70894674	70894674	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032821.2	-1	validated	p.R3969*	0.998	78	0%	82	34.1%	1	0%	-	-	-	NULL
HYDIN	54768	genome.wustl.edu	37	16	70916674	70916674	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032821.2	-1	validated	p.F3367L	1.000	361	0%	475	30.9%	0	-	benign(0.007)	deleterious(0)	neutral(0.445)	NULL
HYDIN	54768	genome.wustl.edu	37	16	70929909	70929909	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032821.2	-1	validated	p.I3040	0.167	191	0%	287	31%	0	-	-	-	-	NULL
HYDIN	54768	genome.wustl.edu	37	16	70929913	70929913	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032821.2	-1	validated	p.D3039G	1.000	198	0%	288	25.3%	0	-	benign(0.063)	deleterious(0)	neutral(0.449)	NULL
HYDIN	54768	genome.wustl.edu	37	16	70942693	70942693	+	Silent	SNP	G	G	A	rs183164278	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032821.2	-1	validated	p.F2691	0.001	437	0%	664	34.2%	0	-	-	-	-	NULL
HYDIN	54768	genome.wustl.edu	37	16	71007841	71007841	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032821.2	-1	validated	p.D1706G	1.000	322	0%	356	15.2%	1	0%	possibly_damaging(0.85)	tolerated(0.06)	deleterious(0.649)	NULL
HYDIN	54768	genome.wustl.edu	37	16	71009051	71009051	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032821.2	-1	validated	p.R1586H	0.004	306	0%	518	22%	1	0%	benign(0.073)	tolerated(0.1)	neutral(0.291)	NULL
HYDIN	54768	genome.wustl.edu	37	16	71019106	71019106	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032821.2	-1	validated	p.P1437	0.607	184	0%	169	28.4%	0	-	-	-	-	NULL
HYDIN	54768	genome.wustl.edu	37	16	71094505	71094505	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032821.2	-1	validated	p.Q811K	0.003	288	0%	419	25.1%	0	-	benign(0.001)	tolerated(0.73)	neutral(0.002)	NULL
HYDIN	54768	genome.wustl.edu	37	16	71218818	71218818	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032821.2	-1	validated	p.R71*	1.000	226	0%	164	32.3%	0	-	-	-	-	NULL
FTSJD1	55783	genome.wustl.edu	37	16	71318705	71318705	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099642.1	-1	validated	p.E373	0.996	66	0%	72	47.2%	8	75%	-	-	-	NULL
FTSJD1	55783	genome.wustl.edu	37	16	71319422	71319422	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099642.1	-1	validated	p.Q134H	1.000	74	0%	74	27%	8	37.5%	benign(0.008)	tolerated(0.05)	neutral(0.345)	HMMPfam_FtsJ,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
ZNF23	7571	genome.wustl.edu	37	16	71482693	71482693	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145911.1	-1	provisional	p.R412I	1.000	149	0%	187	28.3%	9	55.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF19	7567	genome.wustl.edu	37	16	71509740	71509740	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006961.3	-1	reviewed	p.R237I	1.000	186	0%	219	32%	2	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CHST4	10164	genome.wustl.edu	37	16	71571043	71571043	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005769.2	+1	reviewed	p.L155M	0.077	103	0%	146	35.6%	0	-	possibly_damaging(0.883)	tolerated(0.2)	neutral(0.394)	HMMPfam_Sulfotransfer_1,superfamily_SSF52540
CHST4	10164	genome.wustl.edu	37	16	71571191	71571191	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005769.2	+1	reviewed	p.V204A	0.998	117	0%	166	33.7%	1	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Sulfotransfer_1,superfamily_SSF52540
TAT	6898	genome.wustl.edu	37	16	71604653	71604653	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000353.2	-1	reviewed	p.R281C	1.000	165	0%	291	37.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_AA_TRANSFER_CLASS_1,HMMPfam_Aminotran_1_2,superfamily_PLP-dependent transferases
PHLPP2	23035	genome.wustl.edu	37	16	71683199	71683199	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015020.2	-1	validated	p.S1189Y	0.035	60	0%	137	32.8%	0	-	possibly_damaging(0.502)	tolerated(0.06)	deleterious(0.490)	NULL
PHLPP2	23035	genome.wustl.edu	37	16	71712839	71712839	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015020.2	-1	validated	p.E363*	1.000	78	0%	149	30.9%	0	-	-	-	-	HMMPfam_LRR_1,HMMSmart_SM00369,HMMSmart_SM00364,superfamily_L domain-like
AP1G1	164	genome.wustl.edu	37	16	71808373	71808373	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001030007.1	-1	reviewed	p.K108N	1.000	137	0%	307	35.2%	13	76.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Adaptin_N,superfamily_ARM repeat
PKD1L3	342372	genome.wustl.edu	37	16	71977960	71977960	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000335106	-1	known	p.L1276I	0.223	312	0%	732	28.7%	0	-	-	-	-	NULL
DHX38	9785	genome.wustl.edu	37	16	72130894	72130894	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014003.3	+1	reviewed	p.R166H	1.000	95	0%	193	34.7%	21	57.1%	possibly_damaging(0.865)	tolerated(0.1)	deleterious(0.621)	NULL
DHX38	9785	genome.wustl.edu	37	16	72137075	72137075	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014003.3	+1	reviewed	p.I534	1.000	108	0%	145	36.6%	42	38%	-	-	-	HMMSmart_DEXDc
ZFHX3	463	genome.wustl.edu	37	16	72827575	72827575	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006885.3	-1	reviewed	p.K3002N	1.000	177	0%	301	32.2%	7	28.5%	probably_damaging(1)	-	-	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
ZFHX3	463	genome.wustl.edu	37	16	72828294	72828294	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006885.3	-1	reviewed	p.D2763Y	1.000	60	0%	106	30.2%	6	33.3%	probably_damaging(0.995)	-	-	NULL
ZFHX3	463	genome.wustl.edu	37	16	72828699	72828699	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006885.3	-1	reviewed	p.E2628K	1.000	143	0%	261	32.6%	4	100%	probably_damaging(0.99)	-	-	NULL
ZFHX3	463	genome.wustl.edu	37	16	72992553	72992553	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006885.3	-1	reviewed	p.E498K	0.998	83	0%	143	31.5%	1	0%	unknown(0)	-	-	NULL
ZFHX3	463	genome.wustl.edu	37	16	72992930	72992930	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006885.3	-1	reviewed	p.R372Q	0.996	79	0%	92	32.6%	4	75%	unknown(0)	-	-	NULL
GLG1	2734	genome.wustl.edu	37	16	74506453	74506453	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_027264.1	-1	validated	NULL	0.000	12	0%	15	60%	1	100%	-	-	-	-
FA2H	79152	genome.wustl.edu	37	16	74750489	74750489	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024306.4	-1	reviewed	p.F265	0.999	14	0%	48	33.3%	3	100%	-	-	-	HMMPfam_FA_hydroxylase
ZFP1	162239	genome.wustl.edu	37	16	75203432	75203432	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153688.2	+1	validated	p.L142I	0.099	71	0%	81	46.9%	1	0%	benign(0.131)	tolerated(0.31)	neutral(0.038)	superfamily_C2H2 and C2HC zinc fingers
KARS	3735	genome.wustl.edu	37	16	75670405	75670405	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130089.1	-1	reviewed	p.I171	1.000	106	0%	173	25.4%	82	24.3%	-	-	-	HMMPfam_tRNA_anti,superfamily_Nucleic_acid_OB
CNTNAP4	85445	genome.wustl.edu	37	16	76528924	76528924	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138994.3	+1	validated	p.S660Y	0.162	267	0%	281	32.7%	0	-	benign(0.296)	deleterious(0.05)	neutral(0.437)	superfamily_Concanavalin A-like lectins/glucanases
CNTNAP4	85445	genome.wustl.edu	37	16	76572217	76572217	+	Missense_Mutation	SNP	C	C	A	rs35153994		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138994.3	+1	validated	p.S994Y	0.999	129	0%	112	25.9%	0	-	possibly_damaging(0.824)	deleterious(0)	deleterious(0.756)	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
CNTNAP4	85445	genome.wustl.edu	37	16	76592518	76592518	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138994.3	+1	validated	p.L1216	1.000	196	0%	197	33%	1	100%	-	-	-	NULL
MON1B	22879	genome.wustl.edu	37	16	77225398	77225398	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014940.2	+1	validated	p.D6Y	0.995	40	0%	47	25.5%	12	16.6%	probably_damaging(0.976)	deleterious(0)	deleterious(0.863)	NULL
VAT1L	57687	genome.wustl.edu	37	16	77822598	77822598	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020927.1	+1	provisional	p.E7K	1.000	16	0%	30	53.3%	0	-	benign(0.039)	deleterious(0.03)	neutral(0.366)	NULL
VAT1L	57687	genome.wustl.edu	37	16	77822800	77822800	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020927.1	+1	provisional	p.R74H	1.000	59	0%	80	45%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_GroES_like,HMMPfam_ADH_N
CLEC3A	10143	genome.wustl.edu	37	16	78064738	78064738	+	Nonstop_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005752.3	+1	validated	p.*198Y	0.001	64	0%	146	24.7%	0	-	-	-	-	NULL
CENPN	55839	genome.wustl.edu	37	16	81051405	81051405	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100625.1	+1	validated	p.S107L	0.153	41	0%	45	26.7%	20	35%	possibly_damaging(0.538)	tolerated(0.31)	neutral(0.209)	HMMPfam_CHL4
C16orf46	123775	genome.wustl.edu	37	16	81087688	81087688	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100873.1	-1	validated	p.K385N	0.996	338	0.3%	659	29.3%	4	100%	possibly_damaging(0.45)	deleterious(0)	deleterious(0.592)	NULL
C16orf46	123775	genome.wustl.edu	37	16	81095533	81095533	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152337.2	-1	validated	p.S141G	0.000	54	0%	46	26.1%	2	50%	benign(0.045)	tolerated(0.36)	neutral(0.022)	NULL
PKD1L2	114780	genome.wustl.edu	37	16	81164087	81164087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052892.3	-1	reviewed	p.S2007N	0.001	63	0%	90	47.8%	0	-	benign(0.253)	deleterious(0.03)	neutral(0.391)	HMMPfam_PKD_channel
PKD1L2	114780	genome.wustl.edu	37	16	81190489	81190489	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052892.3	-1	reviewed	p.R1367K	1.000	75	0%	153	25.5%	0	-	probably_damaging(0.99)	tolerated(0.33)	neutral(0.466)	NULL
PKD1L2	114780	genome.wustl.edu	37	16	81190638	81190638	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052892.3	-1	reviewed	p.F1317L	1.000	48	0%	94	23.4%	0	-	probably_damaging(0.975)	tolerated(0.14)	deleterious(0.666)	HMMPfam_GPS,HMMSmart_SM00303
PKD1L2	114780	genome.wustl.edu	37	16	81219103	81219103	+	Missense_Mutation	SNP	C	C	A	rs114183450	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001076780.1	-1	reviewed	p.R664L	0.059	43	0%	62	22.6%	0	-	possibly_damaging(0.511)	tolerated(0.16)	neutral(0.231)	NULL
PKD1L2	114780	genome.wustl.edu	37	16	81232573	81232573	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001076780.1	-1	reviewed	p.E413*	0.002	215	0%	414	25.6%	0	-	-	-	-	NULL
PLCG2	5336	genome.wustl.edu	37	16	81819766	81819766	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002661.2	+1	validated	p.A58T	0.978	45	0%	91	30.8%	1	0%	possibly_damaging(0.527)	tolerated(0.31)	neutral(0.205)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
PLCG2	5336	genome.wustl.edu	37	16	81904466	81904466	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002661.2	+1	validated	p.A192T	0.831	148	0%	238	34.5%	1	0%	benign(0)	tolerated(0.77)	neutral(0.001)	superfamily_SSF47473
PLCG2	5336	genome.wustl.edu	37	16	81942053	81942053	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002661.2	+1	validated	p.E530	1.000	112	0%	207	31.4%	2	0%	-	-	-	HMMSmart_SH2,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_SSF50729,superfamily_SSF55550
CDH13	1012	genome.wustl.edu	37	16	83711871	83711871	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001257.3	+1	reviewed	p.D448G	1.000	116	0%	127	39.4%	5	0%	probably_damaging(1)	tolerated(0.16)	deleterious(0.559)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
MLYCD	23417	genome.wustl.edu	37	16	83940607	83940607	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012213.2	+1	reviewed	p.L182	1.000	222	0%	367	32.2%	6	66.6%	-	-	-	HMMPfam_MCD
TAF1C	9013	genome.wustl.edu	37	16	84213901	84213901	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005679.2	-1	reviewed	p.K479T	1.000	32	0%	53	28.3%	41	26.8%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
ATP2C2	9914	genome.wustl.edu	37	16	84444324	84444324	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014861.2	+1	validated	p.E156D	1.000	51	0%	99	44.4%	6	50%	possibly_damaging(0.793)	deleterious(0.04)	deleterious(0.647)	HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transmembrane domain M
ATP2C2	9914	genome.wustl.edu	37	16	84473078	84473078	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014861.2	+1	validated	p.A386V	1.000	257	0%	380	31.3%	15	33.3%	possibly_damaging(0.796)	tolerated(0.07)	deleterious(0.618)	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_Calcium ATPase transmembrane domain M
ATP2C2	9914	genome.wustl.edu	37	16	84485660	84485660	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014861.2	+1	validated	p.M598I	1.000	117	0%	208	18.8%	20	25%	possibly_damaging(0.662)	deleterious(0)	deleterious(0.678)	HMMPfam_Hydrolase,superfamily_HAD-like,superfamily_Calcium ATPase transmembrane domain M
KIAA1609	57707	genome.wustl.edu	37	16	84514195	84514195	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020947.3	-1	validated	p.E399	0.977	83	0%	125	34.4%	8	50%	-	-	-	HMMPfam_TLD,HMMSmart_SM00584
CRISPLD2	83716	genome.wustl.edu	37	16	84872111	84872111	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031476.3	+1	validated	p.V4I	0.005	79	0%	130	32.3%	2	0%	benign(0.01)	tolerated(0.49)	neutral(0.011)	NULL
ZDHHC7	55625	genome.wustl.edu	37	16	85012814	85012814	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145548.1	-1	validated	p.R210I	0.998	165	0%	266	32.7%	19	47.3%	possibly_damaging(0.901)	deleterious(0)	deleterious(0.801)	HMMPfam_zf-DHHC
IRF8	3394	genome.wustl.edu	37	16	85936717	85936717	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002163.2	+1	reviewed	p.E32D	1.000	165	0%	289	38.8%	4	0%	benign(0.002)	tolerated(0.08)	neutral(0.300)	HMMPfam_IRF,HMMSmart_IRF,PatternScan_IRF,superfamily_SSF46785
FOXF1	2294	genome.wustl.edu	37	16	86544554	86544554	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001451.2	+1	reviewed	p.A127P	1.000	38	0%	38	10.5%	0	-	probably_damaging(0.975)	deleterious(0.01)	deleterious(0.823)	HMMPfam_Fork_head,HMMSmart_FH,superfamily_SSF46785
MTHFSD	64779	genome.wustl.edu	37	16	86575392	86575392	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022764.2	-1	validated	p.D197N	1.000	108	0%	132	34.8%	12	41.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_5-FTHF_cyc-lig,superfamily_SSF100950
FOXL1	2300	genome.wustl.edu	37	16	86613120	86613120	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005250.2	+1	validated	p.D264G	1.000	22	0%	22	36.4%	0	-	benign(0.355)	deleterious(0.02)	deleterious(0.495)	NULL
JPH3	57338	genome.wustl.edu	37	16	87678381	87678381	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020655.2	+1	reviewed	p.F300	0.901	64	0%	94	19.1%	0	-	-	-	-	HMMPfam_MORN,HMMSmart_SM00698,superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
JPH3	57338	genome.wustl.edu	37	16	87717844	87717844	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020655.2	+1	reviewed	p.F419L	1.000	66	0%	89	27%	0	-	benign(0.038)	tolerated(0.68)	neutral(0.004)	NULL
KLHDC4	54758	genome.wustl.edu	37	16	87748147	87748147	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017566.3	-1	validated	p.R264	1.000	122	0%	236	31.8%	28	42.8%	-	-	-	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_2
SLC7A5	8140	genome.wustl.edu	37	16	87872373	87872373	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003486.5	-1	validated	p.F330	1.000	87	0%	188	27.7%	83	62.6%	-	-	-	HMMPfam_AA_permease
CA5A	763	genome.wustl.edu	37	16	87960427	87960427	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001739.1	-1	reviewed	p.A89	0.000	68	0%	116	31%	0	-	-	-	-	HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase
ZNF469	84627	genome.wustl.edu	37	16	88497671	88497671	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127464.1	+1	reviewed	p.P1237S	0.000	27	0%	30	33.3%	0	-	probably_damaging(0.999)	-	-	NULL
ZNF469	84627	genome.wustl.edu	37	16	88501562	88501562	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127464.1	+1	reviewed	p.L2534I	0.010	34	0%	39	48.7%	1	0%	benign(0.224)	deleterious(0)	neutral(0.467)	NULL
ZNF469	84627	genome.wustl.edu	37	16	88501823	88501823	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127464.1	+1	reviewed	p.L2621I	0.009	42	0%	51	47.1%	4	0%	benign(0.023)	-	-	NULL
ZC3H18	124245	genome.wustl.edu	37	16	88690383	88690383	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144604.3	+1	validated	p.S604L	0.999	110	0%	274	28.8%	37	43.2%	unknown(0)	tolerated(0.28)	-	NULL
SNAI3	333929	genome.wustl.edu	37	16	88747961	88747961	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178310.3	-1	validated	p.L80M	0.058	23	0%	40	37.5%	0	-	benign(0.013)	tolerated(0.07)	neutral(0.320)	NULL
PIEZO1	9780	genome.wustl.edu	37	16	88782175	88782175	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000327397	-1	known	p.R324*	0.923	39	0%	43	32.6%	47	25.5%	-	-	-	NULL
PIEZO1	9780	genome.wustl.edu	37	16	88792992	88792992	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000451779	-1	known	p.L790	1.000	25	0%	25	20%	5	20%	-	-	-	NULL
CDT1	81620	genome.wustl.edu	37	16	88871993	88871993	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030928.3	+1	validated	p.E212K	1.000	20	0%	28	42.9%	72	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	"HMMPfam_CDT1,superfamily_""Winged helix"" DNA-binding domain"
CDT1	81620	genome.wustl.edu	37	16	88873788	88873788	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030928.3	+1	validated	p.R459C	0.933	23	0%	29	27.6%	64	45.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
GALNS	2588	genome.wustl.edu	37	16	88901719	88901719	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000512.4	-1	reviewed	p.K267R	0.998	88	0%	168	32.1%	25	44%	benign(0)	tolerated(0.49)	neutral(0.011)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
GALNS	2588	genome.wustl.edu	37	16	88902661	88902661	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000512.4	-1	reviewed	p.F194C	1.000	88	0%	149	41.6%	18	55.5%	probably_damaging(0.994)	tolerated(0.19)	deleterious(0.502)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
SPG7	6687	genome.wustl.edu	37	16	89597196	89597196	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003119.2	+1	reviewed	p.E323K	1.000	69	0%	135	34.8%	20	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
FANCA	2175	genome.wustl.edu	37	16	89857908	89857908	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000135.2	-1	reviewed	p.S421N	0.992	37	0%	72	40.3%	9	77.7%	probably_damaging(0.99)	tolerated(0.32)	neutral(0.466)	NULL
SPIRE2	84501	genome.wustl.edu	37	16	89922625	89922625	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032451.1	+1	validated	p.G361	0.001	20	0%	34	17.6%	8	37.5%	-	-	-	NULL
SPIRE2	84501	genome.wustl.edu	37	16	89936091	89936091	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032451.1	+1	validated	e14+1	1.000	98	0%	237	36.7%	1	100%	-	-	-	-
MC1R	4157	genome.wustl.edu	37	16	89985861	89985861	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002386.3	+1	reviewed	p.K65N	1.000	33	0%	46	41.3%	17	47%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
FAM157C	100132055	genome.wustl.edu	37	16	90171191	90171191	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001714162.2	+1	model	p.A167T	0.002	192	0%	252	35.7%	0	-	-	-	-	NULL
DOC2B	8447	genome.wustl.edu	37	17	11957	11957	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000343572	-1	known	p.L185I	1.000	514	0%	964	31.2%	0	-	benign(0.049)	tolerated(0.31)	neutral(0.030)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
RPH3AL	9501	genome.wustl.edu	37	17	69432	69432	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006987.2	-1	provisional	p.K237E	0.010	58	0%	85	34.1%	3	33.3%	probably_damaging(0.995)	deleterious(0.05)	deleterious(0.803)	HMMPfam_RPH3A_effector
GEMIN4	50628	genome.wustl.edu	37	17	648796	648796	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015721.2	-1	reviewed	p.S829	0.000	29	0%	39	17.9%	14	71.4%	-	-	-	NULL
ABR	29	genome.wustl.edu	37	17	953368	953368	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021962.2	-1	reviewed	p.E571D	1.000	294	0%	551	25.4%	28	17.8%	possibly_damaging(0.778)	deleterious(0.02)	deleterious(0.674)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
TUSC5	286753	genome.wustl.edu	37	17	1201552	1201552	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172367.2	+1	validated	p.K176N	0.005	88	0%	120	31.7%	0	-	possibly_damaging(0.819)	deleterious(0.04)	deleterious(0.658)	NULL
PRPF8	10594	genome.wustl.edu	37	17	1554824	1554824	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006445.3	-1	reviewed	p.I2178	1.000	122	0%	237	31.2%	243	42.3%	-	-	-	HMMPfam_Mov34,HMMSmart_SM00232
PRPF8	10594	genome.wustl.edu	37	17	1576786	1576786	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006445.3	-1	reviewed	p.F1174	0.989	104	0%	172	36.6%	53	43.3%	-	-	-	NULL
TLCD2	727910	genome.wustl.edu	37	17	1611094	1611094	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000330676	-1	known	p.S255R	0.002	91	0%	191	32.5%	1	0%	benign(0)	tolerated(1)	-	NULL
WDR81	124997	genome.wustl.edu	37	17	1631034	1631034	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000409644	+1	known	p.F927	0.512	39	0%	65	33.8%	11	45.4%	-	-	-	superfamily_WD40 repeat-like
WDR81	124997	genome.wustl.edu	37	17	1640708	1640708	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000409644	+1	known	p.T1852I	1.000	79	0%	123	34.1%	57	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
SERPINF1	5176	genome.wustl.edu	37	17	1673286	1673286	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002615.4	+1	validated	p.T75	0.000	45	0%	68	32.4%	82	0%	-	-	-	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
SMG6	23293	genome.wustl.edu	37	17	2076133	2076133	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017575.4	-1	validated	p.S1059L	1.000	100	0%	177	35.6%	17	41.1%	benign(0.002)	tolerated(0.38)	neutral(0.018)	NULL
SMG6	23293	genome.wustl.edu	37	17	2186977	2186977	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017575.4	-1	validated	p.N797S	1.000	110	0%	149	35.6%	12	58.3%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
SMG6	23293	genome.wustl.edu	37	17	2202843	2202843	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017575.4	-1	validated	p.R402W	1.000	93	0%	161	39.8%	7	42.8%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
TSR1	55720	genome.wustl.edu	37	17	2236908	2236908	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018128.4	-1	validated	p.D362Y	1.000	214	0%	394	31.7%	21	19%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TSR1	55720	genome.wustl.edu	37	17	2237912	2237912	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018128.4	-1	validated	p.R279*	1.000	79	0%	197	33.5%	7	14.2%	-	-	-	HMMPfam_AARP2CN,HMMSmart_AARP2CN
MNT	4335	genome.wustl.edu	37	17	2298206	2298206	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020310.2	-1	reviewed	p.E206*	1.000	25	0%	57	22.8%	5	60%	-	-	-	NULL
MNT	4335	genome.wustl.edu	37	17	2298723	2298723	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020310.2	-1	reviewed	p.E33D	1.000	23	0%	30	30%	5	80%	possibly_damaging(0.892)	tolerated(0.12)	deleterious(0.612)	NULL
METTL16	79066	genome.wustl.edu	37	17	2324182	2324182	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024086.3	-1	validated	p.R302Q	1.000	192	0%	343	30%	9	44.4%	possibly_damaging(0.673)	tolerated(0.1)	deleterious(0.525)	NULL
RAP1GAP2	23108	genome.wustl.edu	37	17	2923804	2923804	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015085.4	+1	reviewed	p.S556P	1.000	37	0%	34	47.1%	3	33.3%	possibly_damaging(0.666)	tolerated(0.24)	neutral(0.273)	NULL
OR1E2	8388	genome.wustl.edu	37	17	3337122	3337122	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003554.1	-1	provisional	p.N5T	0.916	131	0%	227	37%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF81321
SPATA22	84690	genome.wustl.edu	37	17	3349846	3349846	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032598.4	-1	validated	p.R241I	1.000	211	0%	161	28%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
SPATA22	84690	genome.wustl.edu	37	17	3352141	3352141	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032598.4	-1	validated	p.K211T	0.844	146	0%	185	34.6%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
CTNS	1497	genome.wustl.edu	37	17	3552187	3552187	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031681.2	+1	reviewed	p.R63C	0.010	131	0%	323	30.7%	11	54.5%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	NULL
ITGAE	3682	genome.wustl.edu	37	17	3649140	3649140	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002208.4	-1	reviewed	p.R746I	0.000	60	0%	167	36.5%	0	-	possibly_damaging(0.929)	deleterious(0.01)	deleterious(0.782)	HMMPfam_Integrin_alpha2,superfamily_SSF69179
ATP2A3	489	genome.wustl.edu	37	17	3856696	3856696	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174953.1	-1	reviewed	p.E55G	1.000	25	0%	39	38.5%	1	0%	probably_damaging(0.999)	tolerated(0.05)	deleterious(0.836)	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M
ZZEF1	23140	genome.wustl.edu	37	17	3921172	3921172	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015113.3	-1	validated	p.S2533	0.005	134	0%	192	29.7%	11	27.2%	-	-	-	NULL
ZZEF1	23140	genome.wustl.edu	37	17	3968118	3968118	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015113.3	-1	validated	p.E1419*	0.985	11	0%	16	31.2%	5	40%	-	-	-	NULL
ANKFY1	51479	genome.wustl.edu	37	17	4098375	4098375	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016376.3	-1	validated	p.E424K	1.000	68	0%	114	26.3%	6	50%	benign(0.418)	tolerated(0.14)	neutral(0.385)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
ANKFY1	51479	genome.wustl.edu	37	17	4100730	4100730	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016376.3	-1	validated	p.A347	0.567	71	0%	142	36.6%	4	25%	-	-	-	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
SPNS3	201305	genome.wustl.edu	37	17	4337308	4337308	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182538.4	+1	validated	p.G16C	0.005	16	0%	18	44.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_MFS general substrate transporter
SPNS2	124976	genome.wustl.edu	37	17	4435864	4435864	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001124758.1	+1	provisional	p.G274*	1.000	56	0%	97	29.9%	11	27.2%	-	-	-	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
SPNS2	124976	genome.wustl.edu	37	17	4436551	4436551	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001124758.1	+1	provisional	p.A368T	1.000	27	0%	50	34%	17	52.9%	benign(0.11)	tolerated(0.25)	neutral(0.045)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
MYBBP1A	10514	genome.wustl.edu	37	17	4458506	4458506	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105538.1	-1	validated	p.F38L	1.000	20	0%	35	37.1%	14	50%	benign(0.154)	tolerated(0.38)	neutral(0.031)	superfamily_ARM-type_fold
ALOX15	246	genome.wustl.edu	37	17	4536718	4536718	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001140.3	-1	validated	p.I413M	0.120	76	0%	191	34%	0	-	benign(0.282)	deleterious(0.01)	deleterious(0.492)	HMMPfam_Lipoxygenase,superfamily_Lipoxygenase
PELP1	27043	genome.wustl.edu	37	17	4578663	4578663	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000301396	-1	known	p.L499I	0.002	66	0%	136	28.7%	1	100%	unknown(0)	tolerated(0.54)	-	NULL
CXCL16	58191	genome.wustl.edu	37	17	4638734	4638734	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100812.1	-1	validated	p.S143Y	0.000	77	0%	146	37.7%	20	0%	possibly_damaging(0.928)	deleterious(0.01)	deleterious(0.781)	NULL
PSMB6	5694	genome.wustl.edu	37	17	4701345	4701345	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002798.1	+1	reviewed	p.S158	1.000	50	0%	112	34.8%	433	37.6%	-	-	-	HMMPfam_Proteasome,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PLD2	5338	genome.wustl.edu	37	17	4720043	4720043	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002663.3	+1	validated	e14+2	0.999	65	0%	137	24.8%	0	-	-	-	-	-
GP1BA	2811	genome.wustl.edu	37	17	4836815	4836815	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000173.5	+1	reviewed	p.R306C	0.000	71	0%	152	44.1%	0	-	benign(0.431)	deleterious(0.04)	deleterious(0.489)	NULL
GP1BA	2811	genome.wustl.edu	37	17	4837794	4837794	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000173.5	+1	reviewed	p.S619N	1.000	34	0%	62	32.3%	0	-	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	NULL
ENO3	2027	genome.wustl.edu	37	17	4857102	4857102	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001976.3	+1	reviewed	p.D136Y	1.000	108	0%	154	33.8%	7	85.7%	possibly_damaging(0.894)	deleterious(0)	deleterious(0.796)	superfamily_Enolase N-terminal domain-like
CAMTA2	23125	genome.wustl.edu	37	17	4876114	4876114	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015099.3	-1	validated	p.S818L	0.910	85	0%	130	41.5%	24	45.8%	benign(0.079)	tolerated(0.1)	neutral(0.292)	superfamily_Ankyrin repeat
ZFP3	124961	genome.wustl.edu	37	17	4995353	4995353	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153018.2	+1	validated	p.R185Q	0.144	129	0%	252	28.2%	0	-	probably_damaging(0.987)	tolerated(0.28)	neutral(0.468)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZFP3	124961	genome.wustl.edu	37	17	4995493	4995493	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153018.2	+1	validated	p.K232E	0.896	132	0%	200	35%	2	50%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZFP3	124961	genome.wustl.edu	37	17	4996280	4996280	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153018.2	+1	validated	p.R494Q	0.966	65	0%	126	23.8%	1	100%	probably_damaging(0.997)	tolerated(0.81)	neutral(0.467)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF232	7775	genome.wustl.edu	37	17	5012845	5012845	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014519.2	-1	validated	p.T114	0.987	142	0%	218	36.7%	7	57.1%	-	-	-	HMMPfam_SCAN,HMMSmart_SM00431
USP6	9098	genome.wustl.edu	37	17	5064875	5064875	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004505.2	+1	validated	p.D961Y	1.000	245	0%	365	28.2%	1	0%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_UCH,superfamily_Cysteine proteinases
USP6	9098	genome.wustl.edu	37	17	5071323	5071323	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004505.2	+1	validated	p.E1045*	1.000	148	0%	247	32.4%	1	0%	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
ZNF594	84622	genome.wustl.edu	37	17	5085853	5085853	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032530.1	-1	validated	p.A567S	0.006	213	0%	343	36.2%	0	-	possibly_damaging(0.477)	tolerated(0.17)	neutral(0.216)	superfamily_SSF57667
ZNF594	84622	genome.wustl.edu	37	17	5086449	5086449	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032530.1	-1	validated	p.R368I	0.447	234	0%	414	28.3%	0	-	possibly_damaging(0.944)	tolerated(0.08)	deleterious(0.689)	superfamily_SSF57667
RABEP1	9135	genome.wustl.edu	37	17	5212066	5212066	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004703.4	+1	validated	p.E38*	1.000	81	0%	125	25.6%	0	-	-	-	-	NULL
RABEP1	9135	genome.wustl.edu	37	17	5212080	5212080	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004703.4	+1	validated	p.K42N	1.000	73	0%	131	28.2%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
RABEP1	9135	genome.wustl.edu	37	17	5238553	5238553	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004703.4	+1	validated	p.E148*	1.000	84	0%	230	33%	13	0%	-	-	-	HMMPfam_Rabaptin
RABEP1	9135	genome.wustl.edu	37	17	5276666	5276666	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004703.4	+1	validated	p.D648Y	1.000	128	0%	334	32.3%	3	33.3%	probably_damaging(0.969)	deleterious(0)	deleterious(0.856)	HMMPfam_Rab5-bind
NUP88	4927	genome.wustl.edu	37	17	5294966	5294966	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002532.3	-1	reviewed	p.R467*	0.984	144	0%	266	34.2%	27	11.1%	-	-	-	HMMPfam_Nup88
DHX33	56919	genome.wustl.edu	37	17	5347819	5347819	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020162.2	-1	reviewed	p.I610	0.000	102	0%	154	35.1%	10	40%	-	-	-	HMMPfam_DUF1605
DHX33	56919	genome.wustl.edu	37	17	5356919	5356919	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020162.2	-1	reviewed	p.F459L	1.000	180	0%	365	38.4%	4	0%	probably_damaging(0.993)	deleterious(0.03)	deleterious(0.815)	superfamily_P-loop containing nucleoside triphosphate hydrolases
NLRP1	22861	genome.wustl.edu	37	17	5463136	5463136	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033004.3	-1	reviewed	p.P294S	0.000	285	0%	580	39.5%	2	50%	benign(0)	tolerated(1)	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
NLRP1	22861	genome.wustl.edu	37	17	5463253	5463253	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033004.3	-1	reviewed	p.W255R	0.026	166	0%	276	37%	1	0%	possibly_damaging(0.5)	deleterious(0.04)	deleterious(0.516)	NULL
KIAA0753	9851	genome.wustl.edu	37	17	6528142	6528142	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014804.2	-1	validated	p.R253Q	0.045	168	0%	183	35.5%	3	33.3%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	NULL
TEKT1	83659	genome.wustl.edu	37	17	6718499	6718499	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053285.1	-1	reviewed	p.A204	0.000	201	0%	419	35.8%	0	-	-	-	-	HMMPfam_Tektin
TEKT1	83659	genome.wustl.edu	37	17	6718595	6718595	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053285.1	-1	reviewed	p.E172D	0.997	201	0%	433	33.9%	0	-	benign(0.026)	deleterious(0.02)	neutral(0.384)	HMMPfam_Tektin
CLEC10A	10462	genome.wustl.edu	37	17	6978436	6978436	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182906.2	-1	reviewed	p.C296*	0.939	17	0%	20	35%	0	-	-	-	-	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1
CLEC10A	10462	genome.wustl.edu	37	17	6978686	6978686	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182906.2	-1	reviewed	p.G259S	0.000	118	0%	172	32.6%	1	0%	possibly_damaging(0.874)	tolerated(0.45)	neutral(0.352)	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
ASGR2	433	genome.wustl.edu	37	17	7011180	7011180	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001181.3	-1	reviewed	p.E133D	0.646	113	0%	178	30.3%	0	-	possibly_damaging(0.786)	tolerated(0.14)	deleterious(0.544)	HMMPfam_Lectin_N
DVL2	1856	genome.wustl.edu	37	17	7130748	7130748	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004422.2	-1	reviewed	p.K446N	1.000	51	0%	102	36.3%	52	42.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	"HMMPfam_DEP,HMMSmart_SM00049,superfamily_""Winged helix"" DNA-binding domain"
SLC2A4	6517	genome.wustl.edu	37	17	7189784	7189784	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042.2	+1	reviewed	p.L456F	1.000	211	0%	458	37.8%	0	-	benign(0.003)	tolerated(0.47)	neutral(0.011)	HMMPfam_Sugar_tr,superfamily_MFS_gen_substrate_transporter
TMEM95	339168	genome.wustl.edu	37	17	7259722	7259722	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198154.1	+1	provisional	p.L149I	1.000	114	0%	204	37.7%	0	-	possibly_damaging(0.722)	-	-	NULL
TNK1	8711	genome.wustl.edu	37	17	7290716	7290716	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003985.3	+1	validated	p.L473I	0.006	46	0%	107	20.6%	16	37.5%	possibly_damaging(0.556)	tolerated(0.33)	neutral(0.213)	NULL
PLSCR3	57048	genome.wustl.edu	37	17	7296251	7296251	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000380658	-1	known	p.Q175R	0.730	155	0%	351	29.6%	60	21.6%	unknown(0)	-	-	NULL
NLGN2	57555	genome.wustl.edu	37	17	7317811	7317811	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020795.2	+1	reviewed	p.L219	1.000	65	0%	73	28.8%	14	21.4%	-	-	-	HMMPfam_COesterase,superfamily_SSF53474
SPEM1	374768	genome.wustl.edu	37	17	7324201	7324201	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199339.2	+1	provisional	p.E69D	0.181	136	0%	298	30.9%	0	-	possibly_damaging(0.568)	deleterious(0)	deleterious(0.639)	NULL
C17orf74	201243	genome.wustl.edu	37	17	7330705	7330705	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175734.4	+1	validated	p.E465	1.000	28	0%	34	47.1%	0	-	-	-	-	NULL
FGF11	2256	genome.wustl.edu	37	17	7344850	7344850	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004112.2	+1	reviewed	p.A85V	1.000	94	0%	160	38.1%	2	50%	benign(0.001)	deleterious(0.04)	neutral(0.349)	HMMPfam_FGF,HMMSmart_FGF,superfamily_Cytok_IL1_like
ATP1B2	482	genome.wustl.edu	37	17	7557429	7557429	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001678.3	+1	reviewed	p.E136K	1.000	78	0%	155	32.9%	0	-	benign(0.054)	tolerated(0.91)	neutral(0.004)	HMMPfam_Na_K-ATPase
WRAP53	55135	genome.wustl.edu	37	17	7592917	7592917	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018081.2	+1	validated	p.D180	0.996	130	0%	243	38.3%	17	29.4%	-	-	-	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
DNAH2	146754	genome.wustl.edu	37	17	7673895	7673895	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020877.2	+1	validated	p.K1373N	1.000	99	0%	226	27.9%	0	-	benign(0.003)	tolerated(0.47)	neutral(0.011)	HMMPfam_DHC_N2
DNAH2	146754	genome.wustl.edu	37	17	7691458	7691458	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020877.2	+1	validated	p.A2266T	0.640	66	0%	103	22.3%	0	-	benign(0)	tolerated(0.32)	neutral(0.024)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH2	146754	genome.wustl.edu	37	17	7707784	7707784	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020877.2	+1	validated	p.K3061N	1.000	72	0%	153	32.7%	0	-	possibly_damaging(0.858)	deleterious(0.01)	deleterious(0.737)	NULL
DNAH2	146754	genome.wustl.edu	37	17	7720881	7720881	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020877.2	+1	validated	p.I3341	0.602	81	0%	115	27%	0	-	-	-	-	NULL
DNAH2	146754	genome.wustl.edu	37	17	7721275	7721275	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020877.2	+1	validated	p.I3416	0.998	101	0%	167	35.9%	0	-	-	-	-	NULL
KDM6B	23135	genome.wustl.edu	37	17	7754402	7754402	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080424.1	+1	provisional	p.R1246H	0.999	47	0%	64	39.1%	70	51.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CHD3	1107	genome.wustl.edu	37	17	7814819	7814819	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000439235	+1	known	p.E317K	1.000	65	0%	104	24%	142	31.6%	unknown(0)	-	-	NULL
TRAPPC1	58485	genome.wustl.edu	37	17	7834048	7834048	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021210.4	-1	reviewed	p.Y105C	0.995	50	0%	100	31%	377	42.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sybindin,superfamily_SNARE-like
GUCY2D	3000	genome.wustl.edu	37	17	7918818	7918818	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000180.3	+1	reviewed	p.S981L	1.000	12	0%	25	28%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase
GUCY2D	3000	genome.wustl.edu	37	17	7919283	7919283	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000180.3	+1	reviewed	p.L1028I	1.000	33	0%	27	40.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Guanylate_cyc,HMMSmart_CYCc,superfamily_A/G_cyclase
ENSG00000214999	0	genome.wustl.edu	37	17	7983675	7983675	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000399413	+1	known	p.R119M	0.000	61	0%	93	26.9%	0	-	unknown(0)	-	-	NULL
ALOXE3	59344	genome.wustl.edu	37	17	8006705	8006705	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021628.2	-1	reviewed	p.E631G	1.000	219	0%	476	31.5%	0	-	possibly_damaging(0.804)	tolerated(0.06)	deleterious(0.625)	HMMPfam_Lipoxygenase,superfamily_Lipoxygenase
ALOXE3	59344	genome.wustl.edu	37	17	8015445	8015445	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021628.2	-1	reviewed	p.Q250	0.006	140	0%	266	33.1%	1	0%	-	-	-	superfamily_Lipoxygenase
PER1	5187	genome.wustl.edu	37	17	8053788	8053788	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002616.2	-1	reviewed	p.K79N	1.000	84	0%	210	29.5%	11	27.2%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	NULL
ARHGEF15	22899	genome.wustl.edu	37	17	8215490	8215490	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173728.2	+1	reviewed	p.E45*	0.477	85	0%	157	40.1%	0	-	-	-	-	NULL
NDEL1	81565	genome.wustl.edu	37	17	8363448	8363448	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030808.3	+1	reviewed	p.R305Q	0.999	183	0%	351	29.1%	42	33.3%	benign(0.001)	tolerated(0.14)	neutral(0.249)	HMMPfam_NUDE_C
MYH10	4628	genome.wustl.edu	37	17	8439126	8439126	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005964.1	-1	validated	p.R567*	0.959	220	0%	276	31.2%	6	0%	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
SPDYE4	388333	genome.wustl.edu	37	17	8658847	8658847	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128076.1	-1	provisional	p.F159S	0.808	185	0%	375	35.2%	0	-	benign(0.413)	deleterious(0)	deleterious(0.578)	NULL
SPDYE4	388333	genome.wustl.edu	37	17	8660628	8660628	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128076.1	-1	provisional	p.A98S	0.000	99	0%	114	33.3%	0	-	benign(0.122)	tolerated(0.57)	neutral(0.016)	NULL
NTN1	9423	genome.wustl.edu	37	17	9142995	9142995	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004822.2	+1	reviewed	p.D509Y	1.000	37	0%	50	24%	1	100%	benign(0.409)	deleterious(0.02)	deleterious(0.515)	superfamily_TIMP_like,HMMPfam_NTR,HMMSmart_C345C
WDR16	146845	genome.wustl.edu	37	17	9545080	9545080	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145054.4	+1	validated	p.E539*	1.000	144	0%	313	35.8%	0	-	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like
DHRS7C	201140	genome.wustl.edu	37	17	9683185	9683185	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105571.1	-1	validated	p.K145N	1.000	125	0%	128	34.4%	0	-	benign(0.004)	tolerated(0.24)	neutral(0.037)	HMMPfam_adh_short,superfamily_NAD(P)-binding Rossmann-fold domains
DHRS7C	201140	genome.wustl.edu	37	17	9694494	9694494	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105571.1	-1	validated	p.Q36H	1.000	96	0%	110	30%	0	-	possibly_damaging(0.656)	tolerated(0.1)	deleterious(0.517)	superfamily_NAD(P)-binding Rossmann-fold domains
GLP2R	9340	genome.wustl.edu	37	17	9763388	9763388	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004246.1	+1	reviewed	p.L299M	0.933	200	0%	249	38.2%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_7tm_2
MYH13	8735	genome.wustl.edu	37	17	10215244	10215244	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003802.2	-1	validated	p.E1505D	1.000	73	0%	102	34.3%	0	-	benign(0.096)	deleterious(0.01)	neutral(0.413)	HMMPfam_Myosin_tail_1,superfamily_Prefoldin
MYH13	8735	genome.wustl.edu	37	17	10224955	10224955	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003802.2	-1	validated	p.S1002Y	1.000	443	0.2%	727	33.4%	0	-	benign(0.296)	tolerated(0.05)	neutral(0.437)	superfamily_Prefoldin
MYH13	8735	genome.wustl.edu	37	17	10231355	10231355	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003802.2	-1	validated	p.I840S	1.000	289	0%	476	30.9%	0	-	benign(0.421)	deleterious(0)	deleterious(0.581)	superfamily_P-loop containing nucleoside triphosphate hydrolases
MYH13	8735	genome.wustl.edu	37	17	10248923	10248923	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003802.2	-1	validated	p.S425L	0.991	190	0.5%	380	35.5%	0	-	benign(0.211)	deleterious(0)	neutral(0.465)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYH13	8735	genome.wustl.edu	37	17	10267752	10267752	+	Silent	SNP	G	G	A	rs189377998	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003802.2	-1	validated	p.F32	0.917	215	0%	268	32.8%	0	-	-	-	-	NULL
MYH8	4626	genome.wustl.edu	37	17	10304066	10304066	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002472.2	-1	reviewed	p.E1126K	1.000	108	0%	99	36.4%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Myosin_tail_1
MYH8	4626	genome.wustl.edu	37	17	10309589	10309589	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002472.2	-1	reviewed	e18+2	1.000	202	0%	273	38.8%	0	-	-	-	-	-
MYH4	4622	genome.wustl.edu	37	17	10348292	10348292	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017533.2	-1	validated	e35+1	1.000	439	0%	462	33.5%	0	-	-	-	-	-
MYH4	4622	genome.wustl.edu	37	17	10350412	10350412	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017533.2	-1	validated	p.L1696R	1.000	248	0%	266	27.8%	0	-	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_Myosin_tail_1
MYH4	4622	genome.wustl.edu	37	17	10351817	10351817	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017533.2	-1	validated	p.E1518K	1.000	290	0%	238	39.5%	0	-	probably_damaging(0.995)	tolerated(0.08)	deleterious(0.758)	HMMPfam_Myosin_tail_1
MYH4	4622	genome.wustl.edu	37	17	10364235	10364235	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017533.2	-1	validated	p.E382G	1.000	234	0%	223	35.9%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH1	4619	genome.wustl.edu	37	17	10399439	10399439	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005963.3	-1	reviewed	p.R1666L	1.000	275	0%	240	32.9%	0	-	possibly_damaging(0.69)	deleterious(0)	deleterious(0.692)	HMMPfam_Myosin_tail_1
MYH1	4619	genome.wustl.edu	37	17	10405138	10405138	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005963.3	-1	reviewed	p.E1068*	1.000	377	0%	420	25%	0	-	-	-	-	NULL
MYH1	4619	genome.wustl.edu	37	17	10409202	10409202	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005963.3	-1	reviewed	p.G701C	1.000	200	0%	276	35.5%	0	-	probably_damaging(0.968)	deleterious(0)	deleterious(0.855)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH1	4619	genome.wustl.edu	37	17	10411899	10411899	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005963.3	-1	reviewed	p.L560I	1.000	431	0%	419	30.8%	0	-	possibly_damaging(0.847)	deleterious(0.02)	deleterious(0.708)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH1	4619	genome.wustl.edu	37	17	10419253	10419253	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005963.3	-1	reviewed	p.F165L	1.000	328	0%	296	31.8%	0	-	possibly_damaging(0.687)	deleterious(0.02)	deleterious(0.629)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH1	4619	genome.wustl.edu	37	17	10419884	10419884	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005963.3	-1	reviewed	p.E26K	1.000	273	0%	273	37%	0	-	probably_damaging(0.953)	tolerated(0.24)	neutral(0.434)	NULL
MYH2	4620	genome.wustl.edu	37	17	10426485	10426485	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100112.1	-1	reviewed	p.K1865N	1.000	204	0%	153	28.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_tail_1
MYH2	4620	genome.wustl.edu	37	17	10428199	10428199	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100112.1	-1	reviewed	p.D1616Y	1.000	450	0%	613	33.8%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Myosin_tail_1
MYH2	4620	genome.wustl.edu	37	17	10428769	10428769	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100112.1	-1	reviewed	p.Q1512H	1.000	204	0.5%	238	31.1%	0	-	possibly_damaging(0.773)	deleterious(0.02)	deleterious(0.670)	HMMPfam_Myosin_tail_1
MYH2	4620	genome.wustl.edu	37	17	10438420	10438420	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100112.1	-1	reviewed	p.S717N	1.000	121	0%	163	28.2%	0	-	benign(0)	tolerated(1)	-	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH2	4620	genome.wustl.edu	37	17	10440653	10440653	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100112.1	-1	reviewed	p.E598D	0.773	276	0%	312	32.4%	1	0%	benign(0)	tolerated(0.54)	neutral(0.007)	HMMPfam_Myosin_head,HMMSmart_MYSc,superfamily_SSF52540
MYH3	4621	genome.wustl.edu	37	17	10533707	10533707	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002470.2	-1	reviewed	p.K1785N	1.000	268	0%	278	28.8%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Myosin_tail_1
MYH3	4621	genome.wustl.edu	37	17	10535901	10535901	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002470.2	-1	reviewed	p.K1616N	1.000	114	0%	181	32.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Myosin_tail_1
MYH3	4621	genome.wustl.edu	37	17	10538329	10538329	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002470.2	-1	reviewed	p.A1395D	1.000	82	0%	190	31.1%	0	-	probably_damaging(0.999)	tolerated(0.13)	deleterious(0.743)	HMMPfam_Myosin_tail_1
MYH3	4621	genome.wustl.edu	37	17	10542460	10542460	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002470.2	-1	reviewed	p.E1050V	1.000	248	0%	401	31.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MYH3	4621	genome.wustl.edu	37	17	10543681	10543681	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002470.2	-1	reviewed	p.R799C	1.000	224	0%	344	33.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IQ,HMMSmart_IQ,superfamily_SSF52540
DNAH9	1770	genome.wustl.edu	37	17	11535949	11535949	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001372.3	+1	reviewed	p.L522I	1.000	203	0.5%	258	32.9%	0	-	benign(0.076)	deleterious(0.03)	neutral(0.370)	HMMPfam_DHC_N1
DNAH9	1770	genome.wustl.edu	37	17	11568151	11568151	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001372.3	+1	reviewed	p.E866G	1.000	248	0%	294	33.3%	0	-	benign(0)	tolerated(0.1)	neutral(0.286)	NULL
DNAH9	1770	genome.wustl.edu	37	17	11583249	11583249	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001372.3	+1	reviewed	p.K1177E	1.000	133	0%	164	31.1%	0	-	benign(0.004)	tolerated(0.15)	neutral(0.241)	superfamily_Spectrin repeat
DNAH9	1770	genome.wustl.edu	37	17	11584051	11584051	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001372.3	+1	reviewed	p.E1196D	1.000	69	0%	83	45.8%	0	-	benign(0.076)	tolerated(0.31)	neutral(0.033)	superfamily_Spectrin repeat
DNAH9	1770	genome.wustl.edu	37	17	11584174	11584174	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001372.3	+1	reviewed	p.F1237L	1.000	83	0%	83	31.3%	0	-	possibly_damaging(0.873)	tolerated(0.1)	deleterious(0.625)	NULL
DNAH9	1770	genome.wustl.edu	37	17	11607628	11607628	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001372.3	+1	reviewed	p.V1754M	1.000	122	0%	165	22.4%	0	-	probably_damaging(0.976)	tolerated(0.05)	deleterious(0.763)	NULL
DNAH9	1770	genome.wustl.edu	37	17	11696905	11696905	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001372.3	+1	reviewed	p.R2716Q	1.000	299	0%	472	32%	0	-	possibly_damaging(0.949)	tolerated(0.11)	deleterious(0.665)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH9	1770	genome.wustl.edu	37	17	11696947	11696947	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001372.3	+1	reviewed	p.K2730T	1.000	236	0%	358	34.9%	0	-	possibly_damaging(0.704)	tolerated(0.14)	deleterious(0.503)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DNAH9	1770	genome.wustl.edu	37	17	11790275	11790275	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001372.3	+1	reviewed	p.S3702Y	1.000	122	0%	152	30.3%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
DNAH9	1770	genome.wustl.edu	37	17	11833337	11833337	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001372.3	+1	reviewed	p.S4011F	1.000	87	0%	120	38.3%	0	-	probably_damaging(0.956)	deleterious(0)	deleterious(0.844)	HMMPfam_Dynein_heavy
ZNF18	7566	genome.wustl.edu	37	17	11881557	11881557	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144680.2	-1	provisional	p.R456I	1.000	192	0%	257	30%	6	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF18	7566	genome.wustl.edu	37	17	11896025	11896025	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144680.2	-1	provisional	p.R41H	0.994	62	0%	97	38.1%	2	50%	probably_damaging(0.998)	tolerated(0.5)	deleterious(0.484)	HMMPfam_SCAN,HMMSmart_SM00431
MYOCD	93649	genome.wustl.edu	37	17	12647610	12647610	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153604.2	+1	reviewed	p.E276D	1.000	84	0%	185	32.4%	0	-	probably_damaging(0.983)	tolerated(0.42)	neutral(0.443)	NULL
MYOCD	93649	genome.wustl.edu	37	17	12666548	12666548	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153604.2	+1	reviewed	p.D802N	0.026	126	0%	227	35.7%	0	-	benign(0.15)	tolerated(0.37)	neutral(0.032)	NULL
MYOCD	93649	genome.wustl.edu	37	17	12666895	12666895	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153604.2	+1	reviewed	p.I917	0.891	62	0%	73	23.3%	0	-	-	-	-	NULL
COX10	1352	genome.wustl.edu	37	17	13980289	13980289	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001303.3	+1	reviewed	p.E139*	0.427	152	0%	217	34.1%	13	38.4%	-	-	-	NULL
ENSG00000205325	0	genome.wustl.edu	37	17	14673563	14673563	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000379640	-1	known	p.E101*	0.000	96	0%	118	29.7%	0	-	-	-	-	NULL
ENSG00000251537	0	genome.wustl.edu	37	17	15510956	15510956	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000455584	-1	known	p.R713H	0.017	325	0.3%	629	32%	0	-	-	-	-	superfamily_WD40 repeat-like,superfamily_F-box domain
CDRT1	374286	genome.wustl.edu	37	17	15516070	15516070	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006382.3	-1	provisional	p.V356A	0.000	182	0%	349	29.2%	1	0%	unknown(0)	tolerated(0.11)	-	superfamily_F-box domain
ZNF286A	57335	genome.wustl.edu	37	17	15620506	15620506	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130842.1	+1	validated	p.G490R	1.000	271	0.4%	404	12.6%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF57667
ADORA2B	136	genome.wustl.edu	37	17	15878100	15878100	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000676.2	+1	reviewed	p.D148G	0.066	160	0%	256	37.9%	0	-	benign(0)	tolerated(0.38)	neutral(0.018)	HMMPfam_7tm_1,superfamily_SSF81321
NCOR1	9611	genome.wustl.edu	37	17	15950311	15950311	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006311.2	-1	reviewed	p.E2211D	1.000	190	0%	330	23%	32	46.8%	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	NULL
ZNF287	57336	genome.wustl.edu	37	17	16455402	16455402	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020653.2	-1	validated	p.F685S	0.999	287	0.3%	337	30.6%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF624	57547	genome.wustl.edu	37	17	16525703	16525703	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020787.2	-1	validated	p.E833*	1.000	236	0%	315	32.7%	4	50%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF624	57547	genome.wustl.edu	37	17	16526070	16526070	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020787.2	-1	validated	p.G710	0.999	201	0%	275	34.2%	2	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF624	57547	genome.wustl.edu	37	17	16526591	16526591	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020787.2	-1	validated	p.F537L	0.976	138	0%	164	32.9%	1	0%	probably_damaging(0.994)	deleterious(0.01)	deleterious(0.858)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CCDC144A	9720	genome.wustl.edu	37	17	16665751	16665751	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014695.1	+1	provisional	p.S1264L	0.096	96	0%	78	20.5%	1	100%	benign(0.202)	tolerated(0.19)	neutral(0.069)	NULL
KRT17P1	147228	genome.wustl.edu	37	17	16747036	16747036	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000399211	-1	known	p.E206G	1.000	151	0%	202	22.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Prefoldin,HMMPfam_Filament
TNFRSF13B	23495	genome.wustl.edu	37	17	16842890	16842890	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012452.2	-1	reviewed	p.P285S	0.018	170	0%	243	34.2%	0	-	probably_damaging(0.977)	tolerated(0.5)	neutral(0.429)	NULL
COPS3	8533	genome.wustl.edu	37	17	17174211	17174211	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003653.2	-1	reviewed	p.T99	0.918	99	0%	196	30.6%	39	41%	-	-	-	NULL
TOM1L2	146691	genome.wustl.edu	37	17	17788063	17788063	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001082968.1	-1	validated	p.R129Q	1.000	117	0%	146	35.6%	5	20%	possibly_damaging(0.942)	deleterious(0.03)	deleterious(0.752)	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288
ENSG00000249596	0	genome.wustl.edu	37	17	18028677	18028677	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000503497	-1	novel	NULL	0.000	37	0%	45	37.8%	0	-	-	-	-	-
MYO15A	51168	genome.wustl.edu	37	17	18046141	18046141	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016239.3	+1	reviewed	p.R1966Q	1.000	86	0%	151	35.8%	0	-	possibly_damaging(0.791)	-	-	HMMSmart_SM00015
MYO15A	51168	genome.wustl.edu	37	17	18061933	18061933	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016239.3	+1	reviewed	p.D3022Y	1.000	71	0%	111	37.8%	0	-	benign(0.001)	tolerated(0.22)	neutral(0.042)	NULL
MYO15A	51168	genome.wustl.edu	37	17	18075633	18075633	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000445289	+1	known	p.S449L	0.001	63	0%	105	34.3%	0	-	unknown(0)	deleterious(0.03)	-	NULL
LLGL1	3996	genome.wustl.edu	37	17	18144167	18144167	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004140.3	+1	reviewed	p.A828T	1.000	21	0%	32	34.4%	32	40.6%	benign(0.004)	tolerated(0.23)	neutral(0.042)	NULL
TOP3A	7156	genome.wustl.edu	37	17	18178243	18178243	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004618.3	-1	reviewed	p.S960L	0.000	182	0%	273	36.6%	10	70%	benign(0)	tolerated(0.32)	neutral(0.024)	NULL
SMCR8	140775	genome.wustl.edu	37	17	18220534	18220534	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144775.2	+1	validated	p.T477	0.000	48	0%	155	34.8%	5	0%	-	-	-	NULL
SMCR8	140775	genome.wustl.edu	37	17	18220736	18220736	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144775.2	+1	validated	p.E545*	1.000	35	0%	87	32.2%	1	100%	-	-	-	NULL
ZNF286B	729288	genome.wustl.edu	37	17	18565359	18565359	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145045.1	-1	validated	p.R487I	1.000	318	0%	425	34.8%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF286B	729288	genome.wustl.edu	37	17	18565679	18565679	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145045.1	-1	validated	p.E380D	1.000	252	0%	261	32.2%	3	0%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
FBXW10	10517	genome.wustl.edu	37	17	18675894	18675894	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031456.3	+1	validated	p.P726T	0.249	94	0%	137	26.3%	0	-	benign(0.111)	tolerated(0.27)	neutral(0.042)	NULL
ULK2	9706	genome.wustl.edu	37	17	19750160	19750160	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142610.1	-1	reviewed	p.R120Q	1.000	101	0%	227	30.8%	6	16.6%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
AKAP10	11216	genome.wustl.edu	37	17	19835222	19835222	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007202.2	-1	reviewed	p.R513*	1.000	65	0%	83	24.1%	6	33.3%	-	-	-	NULL
AKAP10	11216	genome.wustl.edu	37	17	19844206	19844206	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007202.2	-1	reviewed	p.F393L	1.000	70	0%	80	35%	1	0%	probably_damaging(0.979)	deleterious(0.01)	deleterious(0.828)	HMMPfam_RGS,HMMSmart_SM00315,superfamily_Regulator of G-protein signaling RGS
SPECC1	92521	genome.wustl.edu	37	17	20108530	20108530	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033553.1	+1	validated	p.E390K	1.000	95	0%	118	34.7%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SPECC1	92521	genome.wustl.edu	37	17	20135127	20135127	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033553.1	+1	validated	p.L710	0.601	124	0%	168	29.2%	13	0%	-	-	-	NULL
CCDC144C	348254	genome.wustl.edu	37	17	20268552	20268552	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000425519	+1	known	p.E671*	0.900	59	0%	97	32%	0	-	-	-	-	NULL
CCDC144C	348254	genome.wustl.edu	37	17	20295801	20295801	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000425519	+1	known	p.S1074L	0.008	63	0%	46	43.5%	0	-	benign(0.195)	tolerated(0.52)	neutral(0.027)	NULL
USP22	23326	genome.wustl.edu	37	17	20914478	20914478	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015276.1	-1	validated	p.T363	0.155	40	0%	50	18%	79	35.4%	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
USP22	23326	genome.wustl.edu	37	17	20931877	20931877	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015276.1	-1	validated	p.A94	0.379	86	0%	144	38.2%	61	47.5%	-	-	-	HMMPfam_zf-UBP
KCNJ12	3768	genome.wustl.edu	37	17	21319337	21319337	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021012.4	+1	validated	p.V228A	1.000	68	0%	83	13.3%	0	-	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	HMMPfam_IRK,superfamily_Ig_E-set
WSB1	26118	genome.wustl.edu	37	17	25631877	25631877	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015626.8	+1	reviewed	p.L184V	1.000	169	0.6%	290	36.6%	16	31.2%	probably_damaging(0.968)	deleterious(0.02)	deleterious(0.793)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
WSB1	26118	genome.wustl.edu	37	17	25636075	25636075	+	Missense_Mutation	SNP	T	T	G	rs146317362	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000452005	+1	known	p.L19V	0.252	87	0%	156	38.5%	12	25%	-	-	-	NULL
LOC440419	440419	genome.wustl.edu	37	17	25755738	25755738	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_040504.2	+1	model	NULL	1.000	37	0%	30	20%	0	-	-	-	-	-
KSR1	8844	genome.wustl.edu	37	17	25931722	25931722	+	Missense_Mutation	SNP	A	A	G	rs66597251		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014238.1	+1	validated	p.K413E	0.011	100	0%	174	32.8%	1	0%	benign(0)	tolerated(0.75)	neutral(0.002)	NULL
NOS2	4843	genome.wustl.edu	37	17	26106044	26106044	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000625.4	-1	reviewed	p.A348V	0.993	43	0%	52	38.5%	0	-	possibly_damaging(0.715)	deleterious(0.04)	deleterious(0.608)	HMMPfam_NO_synthase,superfamily_Nitric oxide (NO) synthase oxygenase domain
ENSG00000251558	0	genome.wustl.edu	37	17	26207412	26207412	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000502259	+1	known	NULL	0.000	129	0%	179	36.9%	0	-	-	-	-	-
TMEM199	147007	genome.wustl.edu	37	17	26684860	26684860	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152464.1	+1	provisional	p.S56Y	0.630	54	0%	66	37.9%	30	50%	probably_damaging(0.983)	deleterious(0.04)	deleterious(0.778)	NULL
SLC13A2	9058	genome.wustl.edu	37	17	26821450	26821450	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003984.3	+1	validated	p.W410R	1.000	181	0%	362	32.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Na_sulph_symp
FOXN1	8456	genome.wustl.edu	37	17	26851631	26851631	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003593.2	+1	reviewed	p.V78	0.991	39	0%	40	30%	0	-	-	-	-	NULL
FOXN1	8456	genome.wustl.edu	37	17	26851922	26851922	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003593.2	+1	reviewed	p.F175L	0.992	39	0%	29	34.5%	0	-	benign(0.156)	deleterious(0.01)	neutral(0.420)	NULL
FOXN1	8456	genome.wustl.edu	37	17	26864189	26864189	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003593.2	+1	reviewed	p.L561R	1.000	58	0%	70	35.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
UNC119	9094	genome.wustl.edu	37	17	26874344	26874344	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005148.3	-1	reviewed	p.A232S	1.000	102	0%	131	38.2%	28	28.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_GMP_PDE_delta,superfamily_E set domains
SPAG5	10615	genome.wustl.edu	37	17	26919577	26919577	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006461.3	-1	reviewed	p.R229C	0.000	112	0%	326	36.2%	13	46.1%	benign(0.004)	tolerated(0.09)	neutral(0.296)	NULL
ENSG00000167524	0	genome.wustl.edu	37	17	26938801	26938801	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000301037	-1	known	p.L236I	1.000	141	0%	253	28.9%	3	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
ENSG00000167524	0	genome.wustl.edu	37	17	26939308	26939308	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000301037	-1	known	p.L208	0.926	143	0%	216	33.3%	0	-	-	-	-	HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SUPT6H	6830	genome.wustl.edu	37	17	27001323	27001323	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003170.3	+1	validated	p.N44	1.000	115	0%	397	33.2%	19	36.8%	-	-	-	NULL
TRAF4	9618	genome.wustl.edu	37	17	27076525	27076525	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004295.3	+1	reviewed	p.R448L	1.000	73	0%	133	32.3%	198	44.4%	probably_damaging(0.953)	tolerated(0.09)	deleterious(0.693)	HMMPfam_MATH,superfamily_TRAF domain-like
ERAL1	26284	genome.wustl.edu	37	17	27183628	27183628	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000412138	+1	known	p.E78D	0.009	66	0%	132	36.4%	1	100%	unknown(0)	-	-	NULL
PHF12	57649	genome.wustl.edu	37	17	27233929	27233929	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033561.1	-1	validated	p.E875D	1.000	184	0%	303	39.3%	30	36.6%	benign(0.037)	tolerated(0.76)	neutral(0.003)	NULL
PHF12	57649	genome.wustl.edu	37	17	27238154	27238154	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033561.1	-1	validated	p.R731*	1.000	186	0%	377	34.7%	29	37.9%	-	-	-	NULL
MYO18A	399687	genome.wustl.edu	37	17	27445426	27445426	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_078471.3	-1	validated	p.N621S	1.000	137	0%	231	30.3%	4	0%	possibly_damaging(0.825)	tolerated(0.83)	neutral(0.313)	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
ANKRD13B	124930	genome.wustl.edu	37	17	27936136	27936136	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152345.4	+1	validated	p.D200N	1.000	26	0%	53	49.1%	4	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ANKRD13B	124930	genome.wustl.edu	37	17	27939427	27939427	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152345.4	+1	validated	p.P422	0.998	102	0%	121	35.5%	5	40%	-	-	-	NULL
EFCAB5	374786	genome.wustl.edu	37	17	28323336	28323336	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198529.3	+1	validated	p.N311D	0.977	175	0%	196	30.6%	0	-	possibly_damaging(0.922)	tolerated(0.12)	deleterious(0.632)	superfamily_EF-hand
NSRP1	84081	genome.wustl.edu	37	17	28512333	28512333	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032141.2	+1	validated	p.R440*	0.787	128	0%	245	32.7%	8	25%	-	-	-	NULL
SLC6A4	6532	genome.wustl.edu	37	17	28536192	28536192	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001045.4	-1	reviewed	p.L506	0.004	58	0%	72	23.6%	0	-	-	-	-	HMMPfam_SNF
SLC6A4	6532	genome.wustl.edu	37	17	28548954	28548954	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001045.4	-1	reviewed	p.S8Y	1.000	51	0%	86	32.6%	0	-	possibly_damaging(0.604)	deleterious(0)	deleterious(0.654)	NULL
SLC6A4	6532	genome.wustl.edu	37	17	28549090	28549090	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000394821	-1	known	p.R5*	0.002	7	0.000	14	0.286	0	-	-	-	-	NULL
BLMH	642	genome.wustl.edu	37	17	28618344	28618344	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000386.2	-1	reviewed	p.N66D	1.000	76	0%	116	29.3%	10	40%	possibly_damaging(0.845)	tolerated(0.07)	deleterious(0.643)	HMMPfam_Peptidase_C1_2,superfamily_Cysteine proteinases
GOSR1	9527	genome.wustl.edu	37	17	28817223	28817223	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004871.2	+1	reviewed	p.R143Q	1.000	159	0%	292	29.8%	17	23.5%	benign(0.41)	tolerated(0.28)	neutral(0.164)	HMMPfam_V-SNARE
ENSG00000247185	0	genome.wustl.edu	37	17	29096928	29096928	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000499895	+1	known	NULL	1.000	103	0%	232	35.8%	41	43.9%	-	-	-	-
ATAD5	79915	genome.wustl.edu	37	17	29161609	29161609	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024857.3	+1	provisional	p.E170D	0.955	26	0%	95	26.3%	0	-	possibly_damaging(0.948)	deleterious(0.01)	deleterious(0.796)	NULL
ATAD5	79915	genome.wustl.edu	37	17	29187579	29187579	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024857.3	+1	provisional	p.E1029*	0.791	62	0%	132	34.8%	0	-	-	-	-	NULL
TEFM	79736	genome.wustl.edu	37	17	29226187	29226187	+	Nonstop_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024683.3	-1	validated	p.*361Y	0.253	64	0%	101	31.7%	12	33.3%	-	-	-	NULL
TEFM	79736	genome.wustl.edu	37	17	29227543	29227543	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024683.3	-1	validated	p.R178Q	0.764	105	0%	214	27.1%	15	20%	benign(0.333)	tolerated(0.63)	neutral(0.108)	superfamily_Ribonuclease H-like
NF1	4763	genome.wustl.edu	37	17	29533315	29533315	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042492.2	+1	reviewed	p.R440*	1.000	394	0%	423	34%	2	0%	-	-	-	NULL
OMG	4974	genome.wustl.edu	37	17	29622389	29622389	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002544.4	-1	validated	p.D321Y	0.895	405	0.2%	785	33.8%	0	-	possibly_damaging(0.855)	deleterious(0.01)	deleterious(0.736)	NULL
EVI2B	2124	genome.wustl.edu	37	17	29631342	29631342	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006495.3	-1	validated	p.P429H	0.377	143	0%	219	36.5%	5	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
NF1	4763	genome.wustl.edu	37	17	29677227	29677227	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042492.2	+1	reviewed	p.R2450*	1.000	298	0%	323	35.6%	3	33.3%	-	-	-	NULL
SUZ12	23512	genome.wustl.edu	37	17	30267332	30267332	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015355.2	+1	reviewed	p.R101Q	1.000	200	0%	349	28.9%	10	30%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
SUZ12	23512	genome.wustl.edu	37	17	30293190	30293190	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015355.2	+1	reviewed	p.T160	0.998	101	0%	102	25.5%	2	0%	-	-	-	NULL
ZNF207	7756	genome.wustl.edu	37	17	30678920	30678920	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098507.1	+1	validated	p.H53N	1.000	161	0%	312	31.7%	68	38.2%	probably_damaging(0.988)	deleterious(0)	deleterious(0.882)	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355
ZNF207	7756	genome.wustl.edu	37	17	30692413	30692413	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098507.1	+1	validated	p.A245	0.049	110	0%	117	32.5%	111	44.1%	-	-	-	NULL
SPACA3	124912	genome.wustl.edu	37	17	31323880	31323880	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173847.3	+1	provisional	p.F121L	0.010	104	0%	196	26%	0	-	benign(0.221)	tolerated(0.06)	neutral(0.345)	HMMPfam_Lys,HMMSmart_SM00263,superfamily_Lysozyme-like
SPACA3	124912	genome.wustl.edu	37	17	31323985	31323985	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173847.3	+1	provisional	p.P156	0.000	50	0%	104	33.7%	0	-	-	-	-	HMMPfam_Lys,HMMSmart_SM00263,superfamily_Lysozyme-like
ENSG00000226049	0	genome.wustl.edu	37	17	32365486	32365486	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000430493	-1	known	p.K411N	1.000	264	0%	452	39.4%	7	0%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
ENSG00000226049	0	genome.wustl.edu	37	17	32366710	32366710	+	Missense_Mutation	SNP	C	C	T	rs189847872	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000430493	-1	known	p.R60Q	0.997	189	0%	278	38.5%	0	-	-	-	-	NULL
CCL7	6354	genome.wustl.edu	37	17	32598198	32598198	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006273.2	+1	reviewed	p.R37I	0.000	135	0%	120	19.2%	0	-	unknown(0)	-	-	PatternScan_SMALL_CYTOKINES_CC,HMMPfam_IL8,HMMSmart_SCY,superfamily_Chemokine_IL8
CCL8	6355	genome.wustl.edu	37	17	32647287	32647287	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005623.2	+1	reviewed	e2-1	0.383	122	0%	146	28.1%	0	-	-	-	-	-
TMEM132E	124842	genome.wustl.edu	37	17	32953315	32953315	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207313.1	+1	provisional	p.F79	1.000	30	0%	20	60%	0	-	-	-	-	NULL
ZNF830	91603	genome.wustl.edu	37	17	33288718	33288718	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052857.3	+1	validated	p.Y45H	1.000	93	0%	156	30.1%	24	54.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LIG3	3980	genome.wustl.edu	37	17	33324836	33324836	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013975.2	+1	reviewed	p.R635*	1.000	129	0%	177	26%	13	7.6%	-	-	-	HMMPfam_DNA_ligase_A_M,superfamily_DNA ligase/mRNA capping enzyme catalytic domain
FNDC8	54752	genome.wustl.edu	37	17	33454424	33454424	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017559.2	+1	validated	p.N191K	0.979	35	0%	58	27.6%	0	-	benign(0.224)	deleterious(0.04)	neutral(0.371)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
FNDC8	54752	genome.wustl.edu	37	17	33456542	33456542	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017559.2	+1	validated	p.K229N	0.088	113	0%	155	29.7%	2	0%	possibly_damaging(0.45)	deleterious(0)	deleterious(0.592)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
UNC45B	146862	genome.wustl.edu	37	17	33507617	33507617	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173167.2	+1	validated	p.E767D	1.000	63	0%	101	35.6%	0	-	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	HMMSmart_SM00185,superfamily_ARM repeat
SLFN5	162394	genome.wustl.edu	37	17	33588077	33588077	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144975.3	+1	validated	p.S367L	0.001	175	0%	310	32.6%	6	66.6%	benign(0)	tolerated(0.84)	neutral(0.001)	NULL
SLFN11	91607	genome.wustl.edu	37	17	33690004	33690004	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001104587.1	-1	validated	p.E275*	0.007	298	0%	413	36.6%	2	0%	-	-	-	HMMPfam_AAA_4
SLFN13	146857	genome.wustl.edu	37	17	33772558	33772558	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144682.5	-1	validated	p.R48W	0.000	239	0%	374	31.6%	9	77.7%	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	NULL
SLFN12L	100506736	genome.wustl.edu	37	17	33806416	33806416	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145027.1	-1	validated	p.E300	0.001	191	0%	271	30.6%	0	-	-	-	-	HMMPfam_AAA_4
SLFN12L	100506736	genome.wustl.edu	37	17	33806439	33806439	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145027.1	-1	validated	p.E293*	0.000	194	0%	279	33.7%	0	-	-	-	-	HMMPfam_AAA_4
SLFN12L	100506736	genome.wustl.edu	37	17	33806960	33806960	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145027.1	-1	validated	p.K119T	0.000	207	0%	282	32.3%	0	-	probably_damaging(0.99)	tolerated(0.23)	deleterious(0.483)	NULL
SLFN14	342618	genome.wustl.edu	37	17	33875987	33875987	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001129820.1	-1	provisional	p.K670N	0.103	220	0%	326	31.9%	0	-	benign(0.075)	deleterious(0.01)	neutral(0.411)	NULL
SLFN14	342618	genome.wustl.edu	37	17	33876002	33876002	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001129820.1	-1	provisional	p.E665D	1.000	206	0%	309	31.7%	0	-	probably_damaging(0.955)	deleterious(0.01)	deleterious(0.804)	NULL
SLFN14	342618	genome.wustl.edu	37	17	33879908	33879908	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001129820.1	-1	provisional	p.S582N	0.995	141	0%	154	35.7%	0	-	benign(0.022)	tolerated(0.86)	neutral(0.002)	NULL
SLFN14	342618	genome.wustl.edu	37	17	33884482	33884482	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001129820.1	-1	provisional	p.E200D	1.000	123	0%	197	27.4%	0	-	probably_damaging(0.99)	deleterious(0.01)	deleterious(0.847)	NULL
AP2B1	163	genome.wustl.edu	37	17	33966644	33966644	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001030006.1	+1	reviewed	p.E434D	1.000	196	0%	335	29.6%	54	40.7%	benign(0.013)	tolerated(0.17)	neutral(0.059)	HMMPfam_Adaptin_N,superfamily_ARM repeat
CCL15	6359	genome.wustl.edu	37	17	34328476	34328476	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032965.3	-1	reviewed	p.S19Y	0.032	106	0%	160	26.3%	0	-	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
CCL23	6368	genome.wustl.edu	37	17	34340787	34340787	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005064.3	-1	reviewed	p.V100G	0.404	133	0%	184	35.9%	1	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	PatternScan_SMALL_CYTOKINES_CC,HMMPfam_IL8,HMMSmart_SM00199,superfamily_Interleukin 8-like chemokines
CCL23	6368	genome.wustl.edu	37	17	34340893	34340893	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005064.3	-1	reviewed	p.H65Y	0.000	151	0%	238	31.5%	0	-	benign(0.013)	deleterious(0.05)	neutral(0.346)	HMMPfam_IL8,superfamily_Interleukin 8-like chemokines
CCL4	6351	genome.wustl.edu	37	17	34432656	34432656	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002984.2	+1	validated	p.P77H	1.000	257	0.4%	407	29%	8	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IL8,HMMSmart_SCY,superfamily_Chemokine_IL8
MYO19	80179	genome.wustl.edu	37	17	34863342	34863342	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000431794	-1	known	p.A455T	0.071	109	0%	147	31.3%	12	41.6%	benign(0.005)	tolerated(0.13)	neutral(0.253)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO19	80179	genome.wustl.edu	37	17	34869479	34869479	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025109.5	-1	validated	p.S270	0.750	194	0%	262	30.2%	24	70.8%	-	-	-	HMMSmart_MYSc,superfamily_SSF52540
ACACA	31	genome.wustl.edu	37	17	35538156	35538156	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198834.1	-1	reviewed	p.E1640*	1.000	251	0%	312	32.4%	7	0%	-	-	-	superfamily_SSF52096
ACACA	31	genome.wustl.edu	37	17	35548213	35548213	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198834.1	-1	reviewed	p.A1474T	1.000	151	0%	183	32.2%	4	25%	benign(0.189)	tolerated(0.21)	neutral(0.061)	HMMPfam_ACC_central
ACACA	31	genome.wustl.edu	37	17	35592008	35592008	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198834.1	-1	reviewed	p.Y1043C	1.000	175	0%	275	26.9%	1	0%	probably_damaging(0.993)	tolerated(0.13)	deleterious(0.703)	HMMPfam_ACC_central
ACACA	31	genome.wustl.edu	37	17	35597475	35597475	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198834.1	-1	reviewed	p.R1013Q	1.000	87	0%	101	31.7%	3	0%	probably_damaging(0.99)	tolerated(0.38)	neutral(0.459)	HMMPfam_ACC_central
MRPL45	84311	genome.wustl.edu	37	17	36454588	36454588	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032351.3	+1	reviewed	p.C80*	1.000	50	0%	114	32.5%	12	16.6%	-	-	-	NULL
MRPL45	84311	genome.wustl.edu	37	17	36455428	36455428	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032351.3	+1	reviewed	p.Q119P	0.996	131	0%	314	27.1%	20	25%	probably_damaging(0.989)	tolerated(0.2)	deleterious(0.488)	HMMPfam_Tim44
MRPL45	84311	genome.wustl.edu	37	17	36462518	36462518	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032351.3	+1	reviewed	p.D127	0.941	66	0%	128	25%	11	0%	-	-	-	HMMPfam_Tim44
ARHGAP23	57636	genome.wustl.edu	37	17	36623053	36623053	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020876.1	+1	provisional	p.R283W	1.000	10	0%	10	50%	1	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
ARHGAP23	57636	genome.wustl.edu	37	17	36646363	36646363	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020876.1	+1	provisional	p.E909K	1.000	52	0%	88	21.6%	6	0%	possibly_damaging(0.564)	deleterious(0.03)	deleterious(0.557)	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
PIP4K2B	8396	genome.wustl.edu	37	17	36926782	36926782	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003559.4	-1	reviewed	p.K359N	1.000	117	0%	244	34.8%	14	28.5%	benign(0.058)	tolerated(0.16)	neutral(0.063)	HMMPfam_PIP5K,HMMSmart_SM00330,superfamily_SAICAR synthase-like
SNORA21	619505	genome.wustl.edu	37	17	37009241	37009241	+	RNA	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_002576.1	-1	provisional	NULL	0.469	41	0%	138	33.3%	1	100%	-	-	-	-
PLXDC1	57125	genome.wustl.edu	37	17	37226128	37226128	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020405.4	-1	validated	p.A455D	0.958	109	0%	177	38.4%	21	0%	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	NULL
STAC2	342667	genome.wustl.edu	37	17	37371256	37371256	+	Silent	SNP	G	G	A	rs35272507	byCluster	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198993.3	-1	validated	p.T240	0.022	113	0%	231	32.5%	0	-	-	-	-	NULL
STAC2	342667	genome.wustl.edu	37	17	37374361	37374361	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198993.3	-1	validated	p.F52L	1.000	16	0%	28	28.6%	0	-	probably_damaging(0.971)	deleterious(0)	deleterious(0.857)	NULL
MED1	5469	genome.wustl.edu	37	17	37566027	37566027	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004774.3	-1	reviewed	p.S816Y	1.000	111	0%	205	39%	5	20%	unknown(0)	deleterious(0.01)	-	NULL
CDK12	51755	genome.wustl.edu	37	17	37681030	37681030	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016507.2	+1	validated	p.R1067*	1.000	106	0%	235	40%	10	10%	-	-	-	NULL
MSL1	339287	genome.wustl.edu	37	17	38289294	38289294	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012241.1	+1	validated	e5-1	1.000	136	0%	354	39.5%	0	-	-	-	-	-
CASC3	22794	genome.wustl.edu	37	17	38318329	38318329	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007359.4	+1	reviewed	p.K177N	1.000	89	0%	231	35.5%	16	37.5%	probably_damaging(0.98)	deleterious(0.01)	deleterious(0.830)	HMMPfam_Btz
TOP2A	7153	genome.wustl.edu	37	17	38548931	38548931	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001067.2	-1	reviewed	p.K1290	1.000	270	0%	573	31.9%	29	79.3%	-	-	-	NULL
TOP2A	7153	genome.wustl.edu	37	17	38567371	38567371	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001067.2	-1	reviewed	p.F398C	1.000	225	0%	398	36.4%	10	10%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00433,HMMPfam_DNA_gyraseB,superfamily_Ribosomal protein S5 domain 2-like
TOP2A	7153	genome.wustl.edu	37	17	38569539	38569539	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001067.2	-1	reviewed	p.R162*	1.000	163	0%	298	35.2%	3	0%	-	-	-	HMMSmart_SM00433,HMMPfam_HATPase_c,superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
TNS4	84951	genome.wustl.edu	37	17	38635982	38635982	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032865.5	-1	validated	p.T618	0.935	92	0%	157	35%	10	30%	-	-	-	HMMPfam_PTB,superfamily_SSF50729
KRT25	147183	genome.wustl.edu	37	17	38907464	38907464	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181534.3	-1	reviewed	p.L262I	0.191	164	0.6%	188	30.9%	0	-	probably_damaging(1)	tolerated(0.22)	deleterious(0.542)	HMMPfam_Filament
KRT25	147183	genome.wustl.edu	37	17	38911420	38911420	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181534.3	-1	reviewed	p.S35Y	0.521	51	0%	70	31.4%	0	-	benign(0.035)	tolerated(0.14)	neutral(0.252)	NULL
KRT27	342574	genome.wustl.edu	37	17	38935974	38935974	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181537.3	-1	reviewed	p.A275V	0.048	103	0%	140	40%	3	0%	benign(0.006)	tolerated(0.54)	neutral(0.007)	HMMPfam_Filament
KRT23	25984	genome.wustl.edu	37	17	39086303	39086303	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015515.3	-1	reviewed	p.V175	0.264	255	0%	374	37.7%	289	52.2%	-	-	-	HMMPfam_Filament
KRTAP4-1	85285	genome.wustl.edu	37	17	39341101	39341101	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033060.2	-1	reviewed	p.V2	1.000	61	0%	84	34.5%	0	-	-	-	-	HMMPfam_Keratin_B2
KRTAP9-9	81870	genome.wustl.edu	37	17	39411692	39411692	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030975.2	+1	reviewed	p.W19R	0.944	222	0%	307	14%	0	-	unknown(0)	tolerated(0.36)	-	HMMPfam_Keratin_B2
KRT34	3885	genome.wustl.edu	37	17	39538244	39538244	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021013.3	-1	reviewed	p.E127D	0.997	144	0%	133	31.6%	0	-	benign(0.402)	deleterious(0)	deleterious(0.574)	HMMPfam_Filament
KRT31	3881	genome.wustl.edu	37	17	39551305	39551305	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002277.2	-1	reviewed	p.N298D	0.993	203	0%	221	35.3%	2	50%	benign(0)	tolerated(0.35)	neutral(0.021)	HMMPfam_Filament
KRT32	3882	genome.wustl.edu	37	17	39623218	39623218	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002278.3	-1	reviewed	p.E120D	0.990	86	0%	98	25.5%	0	-	benign(0.004)	tolerated(0.48)	neutral(0.011)	HMMPfam_Filament
KRT15	3866	genome.wustl.edu	37	17	39674619	39674619	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002275.3	-1	reviewed	p.S154N	1.000	301	0%	526	36.1%	1	0%	possibly_damaging(0.838)	deleterious(0.02)	deleterious(0.703)	HMMPfam_Filament
KRT9	3857	genome.wustl.edu	37	17	39726418	39726418	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000226.3	-1	reviewed	p.R233C	0.602	218	0%	365	31%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Filament
KRT9	3857	genome.wustl.edu	37	17	39728034	39728034	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000226.3	-1	reviewed	p.Y71H	0.000	243	0%	322	37%	0	-	unknown(0)	deleterious(0.01)	-	NULL
KRT14	3861	genome.wustl.edu	37	17	39741234	39741234	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000526.4	-1	reviewed	p.R201C	0.997	146	0%	242	31.4%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Filament
KRT14	3861	genome.wustl.edu	37	17	39742569	39742569	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000526.4	-1	reviewed	p.R173M	0.974	220	0%	266	30.5%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Filament
FKBP10	60681	genome.wustl.edu	37	17	39975644	39975644	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021939.3	+1	reviewed	p.D304N	1.000	56	0%	89	31.5%	54	7.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_FKBP_C,superfamily_SSF54534
KLHL10	317719	genome.wustl.edu	37	17	40001482	40001482	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152467.3	+1	validated	p.L263	0.066	157	0%	459	31.4%	0	-	-	-	-	NULL
KLHL10	317719	genome.wustl.edu	37	17	40004210	40004210	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152467.3	+1	validated	p.R493Q	1.000	108	0%	204	29.4%	0	-	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central
ACLY	47	genome.wustl.edu	37	17	40063716	40063716	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001096.2	-1	reviewed	p.F242	0.017	45	0%	93	35.5%	39	38.4%	-	-	-	NULL
TTC25	83538	genome.wustl.edu	37	17	40113459	40113459	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000377543	+1	known	p.E501D	0.013	73	0%	154	32.5%	0	-	-	-	-	NULL
TTC25	83538	genome.wustl.edu	37	17	40117457	40117457	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000377543	+1	known	p.E659*	0.001	81	0%	260	26.5%	4	75%	-	-	-	NULL
ENSG00000247918	0	genome.wustl.edu	37	17	40119897	40119897	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000499234	-1	novel	NULL	0.010	10	0%	26	50%	0	-	-	-	-	-
DNAJC7	7266	genome.wustl.edu	37	17	40140849	40140849	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003315.3	-1	reviewed	p.K273	0.857	270	0%	474	11%	53	7.5%	-	-	-	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452
NKIRAS2	28511	genome.wustl.edu	37	17	40175761	40175761	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001349.2	+1	validated	p.E142D	1.000	105	0%	266	31.6%	60	46.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00173,HMMSmart_SM00175,superfamily_P-loop containing nucleoside triphosphate hydrolases
KAT2A	2648	genome.wustl.edu	37	17	40270030	40270068	+	Frame_Shift_Del	DEL	CTGAAGCTGAGGAGAGAGAGAGACGTCAGGGATGGGGGG	CTGAAGCTGAGGAGAGAGAGAGACGTCAGGGATGGGGGG	-	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	CTGAAGCTGAGGAGAGAGAGAGACGTCAGGGATGGGGGG	CTGAAGCTGAGGAGAGAGAGAGACGTCAGGGATGGGGGG					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021078.2	-1	validated	p.A394fs	0.910:0.001:0.012:0.010:0.011:0.986	-	-	-	-	-	-	-	-	-	NULL
HSPB9	94086	genome.wustl.edu	37	17	40275208	40275208	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033194.2	+1	validated	p.A114T	0.576	53	1.9%	98	30.6%	0	-	possibly_damaging(0.668)	deleterious(0.04)	deleterious(0.585)	superfamily_HSP20-like chaperones
RAB5C	5878	genome.wustl.edu	37	17	40278791	40278791	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004583.2	-1	validated	p.E173K	1.000	173	0%	339	28.6%	202	29.7%	possibly_damaging(0.538)	deleterious(0.03)	deleterious(0.546)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
KCNH4	23415	genome.wustl.edu	37	17	40330207	40330207	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012285.2	-1	reviewed	p.R166W	0.064	58	0%	107	29.9%	0	-	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	NULL
GHDC	84514	genome.wustl.edu	37	17	40342753	40342753	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032484.4	-1	validated	p.R393*	0.988	64	0%	94	38.3%	17	5.8%	-	-	-	HMMPfam_GH3
STAT3	6774	genome.wustl.edu	37	17	40474378	40474378	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139276.2	-1	reviewed	p.P675S	1.000	163	0%	305	31.1%	65	41.5%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_SH2 domain
STAT3	6774	genome.wustl.edu	37	17	40497666	40497666	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139276.2	-1	reviewed	p.L95F	0.990	86	0%	138	34.1%	19	36.8%	probably_damaging(0.998)	tolerated(0.14)	deleterious(0.724)	HMMPfam_STAT_int,superfamily_Transcription factor STAT-4 N-domain
PTRF	284119	genome.wustl.edu	37	17	40557210	40557210	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012232.5	-1	reviewed	p.R223H	1.000	67	0%	135	34.1%	65	1.5%	probably_damaging(0.967)	deleterious(0)	deleterious(0.853)	NULL
NAGLU	4669	genome.wustl.edu	37	17	40690401	40690401	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000263.3	+1	reviewed	p.F192L	1.000	60	0%	96	27.1%	10	20%	benign(0.085)	tolerated(0.11)	neutral(0.278)	HMMPfam_NAGLU
NAGLU	4669	genome.wustl.edu	37	17	40693127	40693127	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000263.3	+1	reviewed	p.I308	1.000	78	0%	139	32.4%	16	12.5%	-	-	-	HMMPfam_NAGLU
COASY	80347	genome.wustl.edu	37	17	40714833	40714833	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042532.2	+1	validated	p.L94I	0.306	34	0%	56	42.9%	31	48.3%	benign(0.265)	tolerated(0.14)	neutral(0.277)	NULL
CNTNAP1	8506	genome.wustl.edu	37	17	40839976	40839976	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003632.2	+1	reviewed	p.R428Q	0.724	40	0%	56	33.9%	3	33.3%	benign(0.315)	tolerated(0.62)	neutral(0.103)	HMMSmart_LamG,superfamily_ConA_like_lec_gl,HMMPfam_Laminin_G_2
CNTNAP1	8506	genome.wustl.edu	37	17	40841632	40841632	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003632.2	+1	reviewed	p.E574D	1.000	50	0%	87	41.4%	3	33.3%	benign(0.01)	deleterious(0.01)	neutral(0.406)	superfamily_Fibrinogen_a/b/g_C,HMMPfam_EGF,HMMSmart_EGF,superfamily_ConA_like_lec_gl
CNTNAP1	8506	genome.wustl.edu	37	17	40845526	40845526	+	Silent	SNP	G	G	A	rs182868996	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003632.2	+1	reviewed	p.T988	0.011	91	0%	130	30%	2	0%	-	-	-	HMMPfam_EGF,superfamily_ConA_like_lec_gl
LOC100288228	100288228	genome.wustl.edu	37	17	41024444	41024444	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343520.1	-1	model	p.S38	0.935	36	0%	29	51.7%	0	-	-	-	-	NULL
LOC100288228	100288228	genome.wustl.edu	37	17	41024518	41024518	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343520.1	-1	model	p.R14W	0.963	29	0%	27	48.1%	1	100%	-	-	-	NULL
BRCA1	672	genome.wustl.edu	37	17	41246166	41246166	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007294.3	-1	reviewed	p.F461C	1.000	134	0%	182	33%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DHX8	1659	genome.wustl.edu	37	17	41585388	41585388	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004941.1	+1	reviewed	e15+1	1.000	60	0%	111	36%	1	100%	-	-	-	-
C17orf105	284067	genome.wustl.edu	37	17	41857927	41857927	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136483.1	+1	predicted	p.V33I	0.001	113	0%	290	31%	0	-	benign(0)	tolerated(0.39)	neutral(0.016)	NULL
MPP3	4356	genome.wustl.edu	37	17	41878964	41878964	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_003562.1	-1	reviewed	NULL	0.000	28	0%	72	33.3%	2	0%	-	-	-	-
MPP2	4355	genome.wustl.edu	37	17	41958108	41958108	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005374.3	-1	reviewed	p.K367N	1.000	103	0%	111	28.8%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
PPY	5539	genome.wustl.edu	37	17	42019013	42019013	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002722.3	-1	reviewed	p.A4T	0.000	67	0%	103	30.1%	0	-	unknown(0)	tolerated(0.44)	-	NULL
TMEM101	84336	genome.wustl.edu	37	17	42091872	42091872	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032376.2	-1	provisional	p.F57	1.000	26	0%	51	19.6%	10	0%	-	-	-	NULL
ATXN7L3	56970	genome.wustl.edu	37	17	42273432	42273432	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020218.1	-1	validated	p.R172*	1.000	69	0%	164	29.9%	22	18.1%	-	-	-	NULL
ATXN7L3	56970	genome.wustl.edu	37	17	42274378	42274378	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020218.1	-1	validated	p.N125D	1.000	196	0%	323	23.5%	21	19%	possibly_damaging(0.495)	tolerated(0.41)	neutral(0.180)	NULL
ITGA2B	3674	genome.wustl.edu	37	17	42455816	42455816	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000419.3	-1	reviewed	p.N670D	1.000	47	0%	66	40.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Integrin_alpha2,superfamily_Integrin domains
FZD2	2535	genome.wustl.edu	37	17	42635950	42635950	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001466.2	+1	reviewed	p.F298	1.000	68	0%	95	43.2%	32	31.2%	-	-	-	HMMPfam_Frizzled
C17orf104	284071	genome.wustl.edu	37	17	42745102	42745102	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145080.2	+1	validated	p.F608Y	1.000	35	0%	96	38.5%	0	-	possibly_damaging(0.94)	deleterious(0)	deleterious(0.830)	NULL
C17orf104	284071	genome.wustl.edu	37	17	42750822	42750822	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000409122	+1	known	p.S849Y	0.997	185	0%	359	36.2%	3	100%	possibly_damaging(0.835)	deleterious(0.03)	deleterious(0.683)	NULL
GJC1	10052	genome.wustl.edu	37	17	42882571	42882571	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080383.1	-1	reviewed	p.P205	0.985	148	0%	296	36.1%	3	0%	-	-	-	HMMPfam_Connexin_CCC
GJC1	10052	genome.wustl.edu	37	17	42882757	42882757	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080383.1	-1	reviewed	p.E143D	0.996	270	0%	487	34.1%	2	50%	benign(0.035)	tolerated(0.21)	neutral(0.046)	NULL
GFAP	2670	genome.wustl.edu	37	17	42990720	42990720	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002055.3	-1	reviewed	p.A233T	0.998	90	0%	94	38.3%	0	-	benign(0.049)	tolerated(0.07)	neutral(0.322)	HMMPfam_Filament
C1QL1	10882	genome.wustl.edu	37	17	43037583	43037583	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006688.3	-1	provisional	p.F250L	1.000	244	0%	375	33.6%	4	25%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	HMMPfam_C1q,HMMSmart_C1Q,superfamily_TNF_like
PLCD3	113026	genome.wustl.edu	37	17	43197736	43197736	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000322765	-1	known	p.V214I	1.000	226	0%	336	33.9%	6	50%	benign(0)	tolerated(0.72)	neutral(0.002)	superfamily_EF-hand
PLEKHM1	9842	genome.wustl.edu	37	17	43552518	43552518	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014798.2	-1	reviewed	p.D291Y	0.999	58	0%	143	21%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PLEKHM1	9842	genome.wustl.edu	37	17	43552860	43552860	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014798.2	-1	reviewed	p.E177K	0.277	68	0%	154	33.8%	11	18.1%	possibly_damaging(0.643)	deleterious(0.03)	deleterious(0.590)	HMMPfam_RUN,HMMSmart_RUN
KANSL1	284058	genome.wustl.edu	37	17	44108914	44108914	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015443.2	-1	validated	p.S1082	0.262	27	0%	26	38.5%	30	36.6%	-	-	-	NULL
KANSL1	284058	genome.wustl.edu	37	17	44159811	44159811	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015443.2	-1	validated	p.K510T	1.000	121	0%	107	32.7%	8	37.5%	benign(0.006)	tolerated(0.52)	neutral(0.009)	NULL
KANSL1	284058	genome.wustl.edu	37	17	44248726	44248726	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015443.2	-1	validated	p.K262Q	0.868	168	0%	276	21%	7	0%	benign(0.293)	tolerated(0.2)	neutral(0.140)	NULL
LOC644253	644253	genome.wustl.edu	37	17	44321781	44321781	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001719157.2	+1	model	p.R214*	1.000	48	0%	123	18.7%	0	-	-	-	-	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
ENSG00000249872	0	genome.wustl.edu	37	17	44628036	44628036	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000510581	-1	novel	NULL	0.052	164	0%	257	19.5%	1	0%	-	-	-	-
NSF	4905	genome.wustl.edu	37	17	44806253	44806253	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006178.2	+1	validated	p.L621I	1.000	339	0%	229	22.7%	12	41.6%	benign(0)	tolerated(0.3)	neutral(0.029)	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
CDC27	996	genome.wustl.edu	37	17	45214611	45214611	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114091.1	-1	reviewed	p.L613S	0.999	121	0%	177	19.8%	8	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TPR_1,HMMSmart_SM00028,superfamily_TPR-like
CDC27	996	genome.wustl.edu	37	17	45219790	45219790	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114091.1	-1	reviewed	p.K401Q	1.000	43	0%	67	29.9%	5	40%	probably_damaging(0.956)	tolerated(0.52)	neutral(0.408)	superfamily_TPR-like
CDC27	996	genome.wustl.edu	37	17	45221302	45221302	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114091.1	-1	reviewed	p.A379T	1.000	87	0%	141	39%	7	42.8%	benign(0)	tolerated(0.41)	neutral(0.015)	superfamily_TPR-like
ITGB3	3690	genome.wustl.edu	37	17	45360794	45360794	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000212.2	+1	reviewed	p.I80	0.869	100	0%	131	38.9%	1	100%	-	-	-	HMMPfam_Integrin_beta,HMMSmart_SM00187
ITGB3	3690	genome.wustl.edu	37	17	45361816	45361816	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000212.2	+1	reviewed	p.S123	0.818	79	0%	121	33.1%	0	-	-	-	-	HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_Integrin domains
ITGB3	3690	genome.wustl.edu	37	17	45367136	45367136	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000212.2	+1	reviewed	p.L343	0.995	145	0%	202	36.1%	0	-	-	-	-	HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_vWA-like,superfamily_Integrin domains
ITGB3	3690	genome.wustl.edu	37	17	45368426	45368426	+	Missense_Mutation	SNP	C	C	A	rs78121013		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000212.2	+1	reviewed	p.S411Y	1.000	132	0%	186	32.8%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_Integrin domains
C17orf57	124989	genome.wustl.edu	37	17	45473226	45473226	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152347.3	+1	provisional	p.D610N	0.002	228	0%	366	30.1%	1	0%	possibly_damaging(0.632)	tolerated(0.57)	neutral(0.227)	superfamily_EF-hand
LRRC46	90506	genome.wustl.edu	37	17	45913080	45913080	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033413.3	+1	validated	p.L107	0.000	73	0%	120	36.7%	2	50%	-	-	-	HMMPfam_LRR_1,HMMSmart_SM00365,superfamily_Outer arm dynein light chain 1
SP6	80320	genome.wustl.edu	37	17	45924860	45924860	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199262.2	-1	validated	p.K312N	1.000	27	0%	20	45%	6	66.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_C2H2 and C2HC zinc fingers
PNPO	55163	genome.wustl.edu	37	17	46023710	46023710	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018129.3	+1	reviewed	p.E190*	1.000	119	0%	232	30.6%	10	40%	-	-	-	superfamily_FMN_binding
SNX11	29916	genome.wustl.edu	37	17	46189967	46189967	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013323.2	+1	reviewed	p.R25Q	0.999	110	0%	248	32.7%	8	50%	probably_damaging(0.976)	tolerated(0.2)	neutral(0.467)	HMMPfam_PX,HMMSmart_PX,superfamily_PX
SNF8	11267	genome.wustl.edu	37	17	47018398	47018398	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007241.2	-1	provisional	p.K44N	1.000	73	0%	152	34.2%	101	45.5%	benign(0.007)	deleterious(0)	neutral(0.445)	"HMMPfam_EAP30,superfamily_""Winged helix"" DNA-binding domain"
IGF2BP1	10642	genome.wustl.edu	37	17	47075275	47075275	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006546.3	+1	reviewed	p.T56	0.999	37	0%	50	30%	0	-	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
IGF2BP1	10642	genome.wustl.edu	37	17	47121442	47121442	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006546.3	+1	reviewed	p.S438	1.000	156	0%	206	36.4%	0	-	-	-	-	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
IGF2BP1	10642	genome.wustl.edu	37	17	47122386	47122386	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006546.3	+1	reviewed	p.R452C	1.000	232	0%	447	36.5%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
IGF2BP1	10642	genome.wustl.edu	37	17	47123690	47123690	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006546.3	+1	reviewed	p.N532	0.084	83	0%	132	25.8%	0	-	-	-	-	HMMSmart_SM00322,HMMPfam_KH_1,superfamily_Eukaryotic type KH-domain (KH-domain type I)
B4GALNT2	124872	genome.wustl.edu	37	17	47243507	47243507	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153446.2	+1	validated	p.S389Y	1.000	113	0%	199	28.1%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
GNGT2	2793	genome.wustl.edu	37	17	47284193	47284193	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031498.2	-1	reviewed	p.N46H	0.991	142	0%	241	32.4%	4	0%	possibly_damaging(0.524)	tolerated(0.11)	neutral(0.448)	HMMPfam_G-gamma,HMMSmart_SM00224,superfamily_Transducin (heterotrimeric G protein) gamma chain
ABI3	51225	genome.wustl.edu	37	17	47288152	47288152	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016428.2	+1	reviewed	p.N22	1.000	15	0%	35	34.3%	8	0%	-	-	-	NULL
ZNF652	22834	genome.wustl.edu	37	17	47394794	47394794	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145365.1	-1	validated	p.E98D	1.000	166	0%	352	35.8%	10	10%	possibly_damaging(0.741)	tolerated(0.14)	deleterious(0.521)	NULL
NXPH3	11248	genome.wustl.edu	37	17	47656399	47656399	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007225.2	+1	validated	p.E166K	0.998	90	0%	119	36.1%	6	0%	probably_damaging(0.979)	deleterious(0.02)	deleterious(0.805)	HMMPfam_Neurexophilin
SPOP	8405	genome.wustl.edu	37	17	47699368	47699368	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007226.1	-1	reviewed	p.E47A	1.000	110	0%	198	29.8%	4	50%	possibly_damaging(0.905)	tolerated(0.15)	deleterious(0.601)	HMMPfam_MATH,HMMSmart_SM00061,superfamily_TRAF domain-like
SLC35B1	10237	genome.wustl.edu	37	17	47780310	47780310	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005827.1	-1	provisional	p.R276*	1.000	190	0%	390	28.7%	185	10.8%	-	-	-	HMMPfam_UAA,superfamily_SSF103481
KAT7	11143	genome.wustl.edu	37	17	47886511	47886511	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007067.3	+1	provisional	p.E232*	1.000	132	0%	250	34.4%	2	0%	-	-	-	NULL
DLX4	1748	genome.wustl.edu	37	17	48051254	48051254	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138281.2	+1	reviewed	p.A224T	0.813	73	0%	86	36%	0	-	benign(0)	tolerated(0.96)	-	NULL
DLX3	1747	genome.wustl.edu	37	17	48069065	48069065	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005220.2	-1	reviewed	p.A227D	1.000	136	0%	171	32.7%	1	100%	benign(0.002)	tolerated(0.43)	neutral(0.013)	NULL
ITGA3	3675	genome.wustl.edu	37	17	48149416	48149416	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005501.2	+1	reviewed	p.I342	0.986	97	0%	153	32.7%	12	33.3%	-	-	-	HMMPfam_FG-GAP,HMMSmart_SM00191,superfamily_Integrin alpha N-terminal domain
SGCA	6442	genome.wustl.edu	37	17	48248025	48248025	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000513821	+1	known	p.R258*	1.000	81	0%	141	35.5%	2	0%	-	-	-	HMMPfam_Sarcoglycan_2
CHAD	1101	genome.wustl.edu	37	17	48545878	48545878	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001267.2	-1	reviewed	p.K99	1.000	80	0%	99	27.3%	1	100%	-	-	-	HMMSmart_SM00369,superfamily_L domain-like
MYCBPAP	84073	genome.wustl.edu	37	17	48600975	48600975	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032133.4	+1	validated	p.E532*	1.000	249	0%	338	29%	0	-	-	-	-	NULL
EPN3	55040	genome.wustl.edu	37	17	48618243	48618243	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017957.2	+1	validated	p.R357*	0.996	56	0%	91	36.3%	14	42.8%	-	-	-	NULL
CACNA1G	8913	genome.wustl.edu	37	17	48655680	48655680	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018896.3	+1	validated	p.P686S	0.933	48	0%	53	32.1%	0	-	benign(0.003)	tolerated(0.37)	neutral(0.019)	NULL
CACNA1G	8913	genome.wustl.edu	37	17	48683320	48683320	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018896.3	+1	validated	p.S1453L	0.998	29	0%	51	33.3%	0	-	probably_damaging(0.958)	deleterious(0.01)	deleterious(0.807)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1G	8913	genome.wustl.edu	37	17	48699062	48699062	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018896.3	+1	validated	p.E1989	1.000	173	0%	235	30.6%	0	-	-	-	-	NULL
CACNA1G	8913	genome.wustl.edu	37	17	48703608	48703608	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018896.3	+1	validated	p.E2210D	0.999	53	0%	86	36%	0	-	benign(0.177)	tolerated(0.18)	neutral(0.073)	NULL
ABCC3	8714	genome.wustl.edu	37	17	48753893	48753893	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003786.3	+1	reviewed	p.T1108A	1.000	105	0%	191	31.4%	11	45.4%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_ABC_membrane,superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain
WFIKKN2	124857	genome.wustl.edu	37	17	48917252	48917252	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175575.5	+1	reviewed	p.E201D	0.996	179	0%	369	35.2%	0	-	possibly_damaging(0.647)	tolerated(0.17)	neutral(0.286)	NULL
WFIKKN2	124857	genome.wustl.edu	37	17	48917663	48917663	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175575.5	+1	reviewed	p.G338	0.004	40	0%	53	37.7%	0	-	-	-	-	HMMPfam_Kunitz_BPTI,HMMSmart_KU,superfamily_Prot_inh_Kunz-m
SPAG9	9043	genome.wustl.edu	37	17	49071180	49071180	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000514613	-1	known	p.S639F	1.000	102	0%	212	39.2%	14	42.8%	-	-	-	NULL
NME1-NME2	654364	genome.wustl.edu	37	17	49248918	49248918	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001018136.1	+1	validated	p.E253*	1.000	132	0%	233	35.6%	1651	37.8%	-	-	-	HMMPfam_NDK,HMMSmart_NDK,superfamily_NDK
KIF2B	84643	genome.wustl.edu	37	17	51902196	51902196	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032559.4	+1	validated	p.L601S	0.000	206	0%	259	33.6%	0	-	benign(0.017)	tolerated(0.14)	neutral(0.250)	NULL
TMEM100	55273	genome.wustl.edu	37	17	53798372	53798372	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099640.1	-1	validated	p.T20	0.000	115	0%	129	35.7%	2	50%	-	-	-	NULL
DGKE	8526	genome.wustl.edu	37	17	54923152	54923152	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003647.2	+1	reviewed	p.I242	1.000	163	0%	184	35.3%	1	100%	-	-	-	HMMPfam_DAGK_cat,HMMSmart_SM00046
TRIM25	7706	genome.wustl.edu	37	17	54973303	54973303	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005082.4	-1	reviewed	p.K388N	0.999	131	0%	231	34.2%	15	53.3%	possibly_damaging(0.807)	tolerated(0.09)	deleterious(0.601)	NULL
AKAP1	8165	genome.wustl.edu	37	17	55183044	55183044	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003488.3	+1	reviewed	p.S73	0.000	74	0%	142	33.8%	13	69.2%	-	-	-	NULL
AKAP1	8165	genome.wustl.edu	37	17	55184427	55184427	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003488.3	+1	reviewed	p.P534	0.000	63	0%	90	37.8%	16	62.5%	-	-	-	NULL
VEZF1	7716	genome.wustl.edu	37	17	56058077	56058077	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007146.2	-1	validated	p.S288*	1.000	225	0%	306	32%	16	25%	-	-	-	HMMSmart_SM00355
SRSF1	6426	genome.wustl.edu	37	17	56082783	56082783	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006924.4	-1	reviewed	p.S244Y	1.000	125	0%	180	34.4%	90	48.8%	unknown(0)	deleterious(0.03)	-	NULL
EPX	8288	genome.wustl.edu	37	17	56274531	56274531	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000502.4	+1	reviewed	p.G345S	1.000	120	0%	182	30.8%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_An_peroxidase,superfamily_Peroxidase_super
MKS1	54903	genome.wustl.edu	37	17	56293516	56293516	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017777.3	-1	reviewed	p.S117L	0.268	212	0%	326	27%	12	25%	benign(0.103)	tolerated(0.08)	neutral(0.308)	NULL
SEPT4	5414	genome.wustl.edu	37	17	56598198	56598198	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004574.2	-1	reviewed	p.L428R	1.000	228	0%	394	32%	17	0%	benign(0.155)	tolerated(0.23)	neutral(0.055)	NULL
C17orf47	284083	genome.wustl.edu	37	17	56621043	56621043	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001038704.1	-1	predicted	p.Q169*	0.002	181	0%	288	30.6%	0	-	-	-	-	NULL
PPM1E	22843	genome.wustl.edu	37	17	57033116	57033116	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014906.3	+1	reviewed	p.E191*	1.000	131	0%	214	32.2%	0	-	-	-	-	NULL
PPM1E	22843	genome.wustl.edu	37	17	57057758	57057758	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014906.3	+1	reviewed	p.R545H	1.000	90	0%	191	38.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TRIM37	4591	genome.wustl.edu	37	17	57079065	57079065	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005207.2	-1	reviewed	p.S902	0.912	127	0%	197	33.5%	4	50%	-	-	-	NULL
TRIM37	4591	genome.wustl.edu	37	17	57109445	57109445	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005207.2	-1	reviewed	p.S587N	0.923	41	0%	88	33%	8	0%	benign(0)	tolerated(0.43)	neutral(0.013)	NULL
TRIM37	4591	genome.wustl.edu	37	17	57134351	57134351	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005207.2	-1	reviewed	p.E362*	1.000	184	0%	292	36.6%	1	0%	-	-	-	HMMPfam_MATH,HMMSmart_SM00061,superfamily_TRAF domain-like
GDPD1	284161	genome.wustl.edu	37	17	57348304	57348304	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182569.3	+1	validated	p.E240*	1.000	122	0%	220	30.9%	1	0%	-	-	-	HMMPfam_GDPD,superfamily_PLC-like phosphodiesterases
DHX40	79665	genome.wustl.edu	37	17	57651217	57651217	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024612.4	+1	reviewed	p.F221L	1.000	132	0%	236	27.5%	13	38.4%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
DHX40	79665	genome.wustl.edu	37	17	57676800	57676800	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024612.4	+1	reviewed	p.R588C	1.000	244	0%	377	28.9%	21	52.3%	possibly_damaging(0.876)	deleterious(0)	deleterious(0.786)	NULL
CLTC	1213	genome.wustl.edu	37	17	57733300	57733300	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004859.3	+1	reviewed	p.Y294C	1.000	189	0.5%	261	27.2%	30	50%	benign(0.002)	deleterious(0.01)	neutral(0.406)	superfamily_Clathrin heavy-chain terminal domain
CLTC	1213	genome.wustl.edu	37	17	57762424	57762424	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004859.3	+1	reviewed	p.R1481Q	1.000	73	0%	103	21.4%	134	40.2%	probably_damaging(0.999)	tolerated(0.09)	deleterious(0.787)	HMMPfam_Clathrin,HMMSmart_SM00299,superfamily_ARM repeat
PTRH2	51651	genome.wustl.edu	37	17	57775044	57775044	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016077.3	-1	validated	p.R99I	0.998	161	0%	259	30.1%	74	51.3%	benign(0.113)	deleterious(0.03)	neutral(0.373)	HMMPfam_PTH2,superfamily_Peptidyl-tRNA hydrolase II
VMP1	81671	genome.wustl.edu	37	17	57842453	57842453	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030938.3	+1	validated	p.S179Y	1.000	205	0%	409	36.2%	40	45%	possibly_damaging(0.903)	deleterious(0.04)	deleterious(0.707)	NULL
RNFT1	51136	genome.wustl.edu	37	17	58033901	58033901	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016125.3	-1	validated	p.F340C	1.000	109	0%	123	32.5%	7	71.4%	possibly_damaging(0.87)	tolerated(0.33)	neutral(0.362)	NULL
HEATR6	63897	genome.wustl.edu	37	17	58124733	58124733	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022070.4	-1	validated	p.F902L	0.997	354	0%	495	33.7%	5	40%	benign(0.068)	tolerated(0.37)	neutral(0.024)	superfamily_ARM-type_fold
HEATR6	63897	genome.wustl.edu	37	17	58143671	58143671	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022070.4	-1	validated	p.L439I	1.000	142	0%	208	22.1%	3	66.6%	possibly_damaging(0.873)	tolerated(0.16)	neutral(0.399)	superfamily_ARM-type_fold
APPBP2	10513	genome.wustl.edu	37	17	58524951	58524951	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006380.2	-1	reviewed	p.P583	1.000	66	0%	115	40.9%	22	63.6%	-	-	-	NULL
APPBP2	10513	genome.wustl.edu	37	17	58543774	58543774	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006380.2	-1	reviewed	p.E184*	1.000	195	0%	359	29.8%	7	14.2%	-	-	-	superfamily_TPR-like
PPM1D	8493	genome.wustl.edu	37	17	58701094	58701094	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003620.2	+1	reviewed	p.E229K	1.000	99	0%	193	33.2%	13	38.4%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C
BCAS3	54828	genome.wustl.edu	37	17	59067487	59067487	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099432.1	+1	validated	p.Q459H	1.000	85	0%	118	35.6%	11	90.9%	benign(0.001)	tolerated(1)	-	NULL
BCAS3	54828	genome.wustl.edu	37	17	59152367	59152367	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099432.1	+1	validated	p.E721*	1.000	135	0%	184	22.8%	11	0%	-	-	-	NULL
BCAS3	54828	genome.wustl.edu	37	17	59469395	59469395	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099432.1	+1	validated	p.G899D	1.000	69	1.4%	69	42%	13	61.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
NACA2	342538	genome.wustl.edu	37	17	59668331	59668331	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199290.3	-1	validated	p.R71W	1.000	411	0%	578	35.6%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_NAC
BRIP1	83990	genome.wustl.edu	37	17	59760671	59760671	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032043.1	-1	reviewed	p.P1246T	0.018	71	0%	70	30%	1	100%	benign(0.001)	deleterious(0)	neutral(0.445)	NULL
INTS2	57508	genome.wustl.edu	37	17	59949655	59949655	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020748.2	-1	validated	p.E925*	1.000	215	0%	267	29.6%	2	0%	-	-	-	NULL
MED13	9969	genome.wustl.edu	37	17	60040240	60040240	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005121.2	-1	reviewed	p.P1646H	1.000	187	0%	315	26.7%	6	83.3%	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	HMMPfam_TRAP_240kDa
MED13	9969	genome.wustl.edu	37	17	60050217	60050217	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005121.2	-1	reviewed	p.R1280*	1.000	140	0%	184	34.2%	5	40%	-	-	-	HMMPfam_TRAP_240kDa
MED13	9969	genome.wustl.edu	37	17	60106923	60106923	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005121.2	-1	reviewed	p.R421K	1.000	142	0%	224	34.4%	3	33.3%	possibly_damaging(0.855)	tolerated(0.53)	neutral(0.338)	NULL
ENSG00000188755	0	genome.wustl.edu	37	17	60345521	60345521	+	Missense_Mutation	SNP	C	C	A	rs3895728		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000339120	-1	known	p.K249N	0.769	211	0%	283	36.7%	0	-	-	-	-	HMMPfam_TBC,HMMSmart_TBC
EFCAB3	146779	genome.wustl.edu	37	17	60484014	60484014	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144933.1	+1	validated	p.K273T	0.990	47	0%	49	49%	0	-	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	NULL
TLK2	11011	genome.wustl.edu	37	17	60655911	60655911	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006852.3	+1	validated	p.R421M	1.000	154	0%	292	28.8%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TLK2	11011	genome.wustl.edu	37	17	60683575	60683575	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006852.3	+1	validated	p.I648	1.000	247	0%	517	32.3%	15	46.6%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
MARCH10	162333	genome.wustl.edu	37	17	60814634	60814634	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001100875.1	-1	validated	p.E199*	0.999	250	0%	457	30.9%	0	-	-	-	-	NULL
TANC2	26115	genome.wustl.edu	37	17	61417684	61417684	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025185.3	+1	validated	p.L526I	1.000	46	0%	64	20.3%	2	100%	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	superfamily_P-loop containing nucleoside triphosphate hydrolases
TANC2	26115	genome.wustl.edu	37	17	61466098	61466098	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025185.3	+1	validated	p.L858I	1.000	235	0%	232	36.2%	2	50%	benign(0.425)	tolerated(0.1)	neutral(0.424)	HMMPfam_Ank,HMMSmart_SM00248,superfamily_Ankyrin repeat
ACE	1636	genome.wustl.edu	37	17	61560856	61560856	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000789.2	+1	reviewed	p.R508Q	0.845	123	0%	208	28.4%	7	0%	benign(0.234)	tolerated(0.58)	neutral(0.029)	"HMMPfam_Peptidase_M2,superfamily_Metalloproteases (""zincins"") catalytic domain"
ACE	1636	genome.wustl.edu	37	17	61568661	61568661	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000789.2	+1	reviewed	p.S944L	1.000	81	0%	92	37%	11	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	"HMMPfam_Peptidase_M2,superfamily_Metalloproteases (""zincins"") catalytic domain"
DCAF7	10238	genome.wustl.edu	37	17	61656741	61656741	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000310827	+1	known	p.N114S	1.000	126	0%	243	32.9%	45	33.3%	benign(0.103)	tolerated(0.75)	neutral(0.009)	HMMSmart_SM00320,superfamily_WD40 repeat-like
MAP3K3	4215	genome.wustl.edu	37	17	61710043	61710043	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203351.1	+1	reviewed	p.E3K	1.000	55	0%	141	35.5%	2	0%	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	NULL
DDX42	11325	genome.wustl.edu	37	17	61885111	61885111	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007372.2	+1	reviewed	p.D292Y	1.000	118	0.8%	295	35.3%	15	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DEAD,HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
DDX42	11325	genome.wustl.edu	37	17	61888507	61888507	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007372.2	+1	reviewed	p.R458*	1.000	112	0%	235	28.1%	23	21.7%	-	-	-	HMMSmart_SM00487,superfamily_P-loop containing nucleoside triphosphate hydrolases
FTSJ3	117246	genome.wustl.edu	37	17	61898270	61898270	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017647.3	-1	reviewed	p.G667	1.000	117	0%	163	28.2%	58	31%	-	-	-	HMMPfam_Spb1_C
SMARCD2	6603	genome.wustl.edu	37	17	61912912	61912912	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098426.1	-1	reviewed	p.R195W	1.000	105	0%	171	35.1%	54	51.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SMARCD2	6603	genome.wustl.edu	37	17	61914891	61914891	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098426.1	-1	reviewed	p.R104Q	1.000	15	0%	28	28.6%	30	40%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	NULL
GH2	2689	genome.wustl.edu	37	17	61957738	61957738	+	Missense_Mutation	SNP	G	G	A	rs71640282		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022558.2	-1	reviewed	p.S198L	0.089	296	0%	429	35.7%	0	-	benign(0.04)	deleterious(0)	neutral(0.447)	NULL
GH2	2689	genome.wustl.edu	37	17	61958069	61958069	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022557.2	-1	reviewed	p.E173D	0.000	102	0%	145	22.1%	0	-	possibly_damaging(0.602)	deleterious(0.02)	deleterious(0.592)	NULL
CSHL1	1444	genome.wustl.edu	37	17	61987449	61987449	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000450719	-1	known	p.C177S	0.000	128	0%	181	28.7%	0	-	benign(0.04)	deleterious(0.02)	neutral(0.386)	NULL
SCN4A	6329	genome.wustl.edu	37	17	62018602	62018602	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000334.4	-1	reviewed	p.L1680	1.000	213	0%	356	30.9%	0	-	-	-	-	NULL
SCN4A	6329	genome.wustl.edu	37	17	62019157	62019157	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000334.4	-1	reviewed	p.I1495	1.000	179	0%	399	32.1%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
SCN4A	6329	genome.wustl.edu	37	17	62042029	62042029	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000334.4	-1	reviewed	p.R417	0.991	128	0%	332	22.9%	0	-	-	-	-	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
TEX2	55852	genome.wustl.edu	37	17	62238177	62238177	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018469.3	-1	validated	p.E937*	1.000	242	0%	364	28.8%	8	12.5%	-	-	-	NULL
TEX2	55852	genome.wustl.edu	37	17	62290103	62290103	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018469.3	-1	validated	p.P492H	1.000	146	0%	255	34.9%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CEP95	90799	genome.wustl.edu	37	17	62512937	62512937	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138363.1	+1	provisional	p.S155Y	0.998	176	0%	283	30.7%	4	75%	probably_damaging(0.966)	deleterious(0.02)	deleterious(0.791)	NULL
CEP95	90799	genome.wustl.edu	37	17	62518917	62518917	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138363.1	+1	provisional	p.E271D	0.003	218	0%	309	31.1%	5	40%	probably_damaging(0.972)	deleterious(0.03)	deleterious(0.778)	NULL
CEP95	90799	genome.wustl.edu	37	17	62523228	62523228	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138363.1	+1	provisional	e11-1	1.000	109	0%	218	37.2%	0	-	-	-	-	-
CEP95	90799	genome.wustl.edu	37	17	62523293	62523293	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138363.1	+1	provisional	p.G406V	0.012	126	0%	288	25.7%	4	25%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
LRRC37A3	374819	genome.wustl.edu	37	17	62854992	62854992	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199340.2	-1	provisional	p.E1572*	0.994	343	0%	387	26.6%	7	14.2%	-	-	-	NULL
LRRC37A3	374819	genome.wustl.edu	37	17	62856174	62856174	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199340.2	-1	provisional	p.D1364Y	0.009	75	0%	114	36.8%	5	40%	possibly_damaging(0.882)	deleterious(0)	deleterious(0.789)	NULL
ENSG00000232457	0	genome.wustl.edu	37	17	62952442	62952442	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000413214	+1	known	p.I132	0.152	55	0%	104	22.1%	0	-	-	-	-	superfamily_MFS general substrate transporter
GNA13	10672	genome.wustl.edu	37	17	63052493	63052493	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006572.4	-1	validated	p.G73	0.996	43	0%	42	57.1%	9	44.4%	-	-	-	HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
RGS9	8787	genome.wustl.edu	37	17	63193250	63193250	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003835.3	+1	reviewed	p.E289D	0.017	89	0%	130	33.1%	0	-	benign(0)	tolerated(0.19)	neutral(0.050)	superfamily_Regulator of G-protein signaling RGS
AXIN2	8313	genome.wustl.edu	37	17	63554433	63554433	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004655.3	-1	reviewed	p.E102	1.000	165	0%	268	31.7%	37	54%	-	-	-	HMMPfam_RGS,HMMSmart_SM00315,superfamily_Regulator of G-protein signaling RGS
CEP112	201134	genome.wustl.edu	37	17	64001869	64001869	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145036.3	-1	validated	p.E559*	1.000	154	0%	152	31.6%	1	0%	-	-	-	NULL
CEP112	201134	genome.wustl.edu	37	17	64025264	64025264	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145036.3	-1	validated	p.E494*	1.000	336	0%	451	32.2%	0	-	-	-	-	NULL
CEP112	201134	genome.wustl.edu	37	17	64026046	64026046	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145036.3	-1	validated	p.K438	0.754	337	0%	300	33%	3	0%	-	-	-	NULL
CEP112	201134	genome.wustl.edu	37	17	64062923	64062923	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145036.3	-1	validated	p.E310*	1.000	508	0%	694	32%	0	-	-	-	-	NULL
PRKCA	5578	genome.wustl.edu	37	17	64685162	64685162	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002737.2	+1	reviewed	p.F305	1.000	95	0%	199	33.2%	7	42.8%	-	-	-	NULL
PRKCA	5578	genome.wustl.edu	37	17	64734955	64734955	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002737.2	+1	reviewed	p.F435C	1.000	183	0%	368	31%	5	80%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
CACNG4	27092	genome.wustl.edu	37	17	65021073	65021073	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014405.2	+1	reviewed	p.K134N	0.976	90	0%	86	32.6%	46	8.6%	benign(0.245)	deleterious(0)	deleterious(0.470)	HMMPfam_PMP22_Claudin
HELZ	9931	genome.wustl.edu	37	17	65103322	65103322	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014877.3	-1	validated	p.R1735Q	1.000	131	0%	274	37.6%	13	53.8%	unknown(0)	deleterious(0.02)	-	NULL
PSMD12	5718	genome.wustl.edu	37	17	65346383	65346383	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002816.3	-1	reviewed	p.R123*	1.000	134	0%	261	26.4%	17	17.6%	-	-	-	NULL
PITPNC1	26207	genome.wustl.edu	37	17	65688749	65688749	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012417.2	+1	reviewed	p.K248N	1.000	149	0%	284	39.8%	73	43.8%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	NULL
BPTF	2186	genome.wustl.edu	37	17	65871751	65871751	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004459.6	+1	reviewed	p.E648D	1.000	81	0%	114	29.8%	1	0%	benign(0.004)	tolerated(0.36)	neutral(0.020)	NULL
BPTF	2186	genome.wustl.edu	37	17	65888109	65888109	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182641.3	+1	reviewed	p.A672T	1.000	57	0%	90	27.8%	3	33.3%	probably_damaging(0.996)	tolerated(0.3)	deleterious(0.490)	NULL
BPTF	2186	genome.wustl.edu	37	17	65905752	65905752	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182641.3	+1	reviewed	p.R956Q	0.959	69	0%	105	28.6%	2	50%	benign(0.112)	tolerated(0.44)	neutral(0.021)	NULL
BPTF	2186	genome.wustl.edu	37	17	65907645	65907645	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182641.3	+1	reviewed	p.I1215	0.000	62	0%	94	28.7%	3	33.3%	-	-	-	NULL
BPTF	2186	genome.wustl.edu	37	17	65908108	65908108	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182641.3	+1	reviewed	p.R1370G	0.071	74	0%	129	34.9%	1	100%	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
BPTF	2186	genome.wustl.edu	37	17	65955664	65955664	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182641.3	+1	reviewed	p.L2645P	1.000	16	0%	28	21.4%	31	41.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
KPNA2	3838	genome.wustl.edu	37	17	66033550	66033550	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002266.2	+1	reviewed	p.R51I	1.000	71	0%	204	24%	71	39.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_IBB,superfamily_ARM repeat
PRKAR1A	5573	genome.wustl.edu	37	17	66511612	66511612	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002734.3	+1	reviewed	p.K24	1.000	86	0%	128	32%	27	18.5%	-	-	-	NULL
PRKAR1A	5573	genome.wustl.edu	37	17	66511703	66511703	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002734.3	+1	reviewed	p.E55*	1.000	89	0%	144	31.9%	43	6.9%	-	-	-	HMMPfam_RIIa,HMMSmart_SM00394
FAM20A	54757	genome.wustl.edu	37	17	66535499	66535499	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017565.3	-1	validated	p.S447L	0.995	242	0%	409	29.3%	9	0%	benign(0.032)	tolerated(0.15)	neutral(0.242)	HMMPfam_DUF1193
ABCA8	10351	genome.wustl.edu	37	17	66878855	66878855	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007168.2	-1	reviewed	p.S1198Y	1.000	374	0%	378	30.4%	6	0%	benign(0)	tolerated(0.06)	neutral(0.323)	NULL
ABCA8	10351	genome.wustl.edu	37	17	66902305	66902305	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007168.2	-1	reviewed	e16-1	0.997	165	0%	235	35.3%	0	-	-	-	-	-
ABCA8	10351	genome.wustl.edu	37	17	66903889	66903889	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007168.2	-1	reviewed	p.K717T	0.657	400	0%	480	32.7%	0	-	benign(0.037)	tolerated(0.14)	neutral(0.252)	NULL
ABCA9	10350	genome.wustl.edu	37	17	66989176	66989176	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080283.3	-1	reviewed	p.V1202A	0.000	228	0%	289	31.5%	0	-	benign(0)	tolerated(0.47)	neutral(0.011)	NULL
ABCA6	23460	genome.wustl.edu	37	17	67075167	67075167	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080284.2	-1	reviewed	p.E1601K	1.000	386	0%	358	25.1%	6	0%	benign(0.187)	tolerated(0.11)	neutral(0.289)	NULL
ABCA6	23460	genome.wustl.edu	37	17	67101693	67101693	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080284.2	-1	reviewed	p.D884N	0.000	179	0%	145	33.1%	0	-	benign(0.01)	tolerated(0.28)	neutral(0.032)	NULL
ABCA6	23460	genome.wustl.edu	37	17	67101697	67101697	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080284.2	-1	reviewed	p.K882N	0.000	179	0%	138	37%	0	-	benign(0.124)	tolerated(0.39)	neutral(0.026)	NULL
ABCA10	10349	genome.wustl.edu	37	17	67148254	67148254	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080282.3	-1	reviewed	p.E1443K	0.835	390	0.3%	388	24.2%	0	-	possibly_damaging(0.671)	tolerated(0.37)	neutral(0.257)	superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCA10	10349	genome.wustl.edu	37	17	67151162	67151162	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080282.3	-1	reviewed	p.K1231T	1.000	130	0%	144	28.5%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCA10	10349	genome.wustl.edu	37	17	67178908	67178908	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080282.3	-1	reviewed	p.D847Y	0.582	179	0%	114	30.7%	0	-	probably_damaging(0.961)	deleterious(0.01)	deleterious(0.810)	NULL
ABCA10	10349	genome.wustl.edu	37	17	67197811	67197811	+	Splice_Site	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080282.3	-1	reviewed	e8-2	0.073	87	0%	98	37.8%	0	-	-	-	-	-
ABCA5	23461	genome.wustl.edu	37	17	67247996	67247996	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018672.3	-1	reviewed	p.R1476Q	1.000	118	0%	142	29.6%	7	28.5%	probably_damaging(0.977)	tolerated(0.43)	neutral(0.432)	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCA5	23461	genome.wustl.edu	37	17	67257346	67257346	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018672.3	-1	reviewed	p.I1162L	0.012	100	0%	117	22.2%	3	66.6%	benign(0)	tolerated(1)	-	NULL
SOX9	6662	genome.wustl.edu	37	17	70120328	70120328	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000346.3	+1	reviewed	p.D444N	1.000	274	0%	406	35.7%	8	0%	benign(0.274)	deleterious(0)	deleterious(0.474)	NULL
SDK2	54549	genome.wustl.edu	37	17	71346499	71346499	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144952.1	-1	provisional	p.S1972Y	0.994	104	0%	129	36.4%	0	-	benign(0.004)	tolerated(0.36)	neutral(0.020)	NULL
SDK2	54549	genome.wustl.edu	37	17	71364724	71364724	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144952.1	-1	provisional	p.F1663L	1.000	47	0%	62	32.3%	0	-	benign(0.379)	deleterious(0.01)	deleterious(0.526)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
SDK2	54549	genome.wustl.edu	37	17	71420182	71420182	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144952.1	-1	provisional	p.R545C	0.999	38	0%	47	19.1%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
SDK2	54549	genome.wustl.edu	37	17	71434243	71434243	+	Missense_Mutation	SNP	G	G	A	rs146398103	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144952.1	-1	provisional	p.S259L	0.866	54	0%	55	36.4%	0	-	benign(0.026)	tolerated(0.2)	neutral(0.050)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
DNAI2	64446	genome.wustl.edu	37	17	72301466	72301466	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023036.4	+1	reviewed	p.P366T	1.000	87	0%	139	33.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
KIF19	124602	genome.wustl.edu	37	17	72339197	72339197	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153209.3	+1	validated	p.D118E	0.859	63	0%	100	38%	0	-	possibly_damaging(0.662)	tolerated(0.35)	neutral(0.255)	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIF19	124602	genome.wustl.edu	37	17	72343978	72343979	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153209.3	+1	validated	p.E330fs	0.924:0.998	-	-	-	-	-	-	-	-	-	HMMPfam_Kinesin,HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases
KIF19	124602	genome.wustl.edu	37	17	72351436	72351436	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153209.3	+1	validated	p.C994	0.033	36	0%	55	34.5%	0	-	-	-	-	NULL
GPR142	350383	genome.wustl.edu	37	17	72368597	72368597	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181790.1	+1	provisional	p.F416S	0.988	31	0%	36	33.3%	0	-	probably_damaging(0.962)	deleterious(0)	deleterious(0.850)	superfamily_SSF81321
LOC100289576	100289576	genome.wustl.edu	37	17	72436815	72436815	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343581.1	-1	model	p.D190Y	0.998	68	0%	110	34.5%	4	25%	-	-	-	NULL
CD300E	342510	genome.wustl.edu	37	17	72613513	72613513	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181449.1	-1	provisional	p.G44	0.000	144	0%	204	35.3%	3	0%	-	-	-	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
RAB37	326624	genome.wustl.edu	37	17	72739435	72739435	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006638.2	+1	validated	p.L108M	1.000	203	0%	398	34.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540
FADS6	283985	genome.wustl.edu	37	17	72878907	72878907	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000413142	-1	known	p.Q14R	0.000	27	0%	40	32.5%	0	-	unknown(0)	-	-	NULL
USH1G	124590	genome.wustl.edu	37	17	72916093	72916093	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173477.2	-1	reviewed	p.E280K	0.995	31	0%	38	47.4%	14	42.8%	possibly_damaging(0.822)	tolerated(0.2)	neutral(0.360)	NULL
OTOP3	347741	genome.wustl.edu	37	17	72937555	72937555	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178233.1	+1	provisional	p.E47	0.015	43	0%	55	47.3%	0	-	-	-	-	NULL
C17orf28	283987	genome.wustl.edu	37	17	72958404	72958404	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030630.2	-1	validated	p.S179N	1.000	37	0%	40	40%	99	46.4%	probably_damaging(0.997)	tolerated(0.12)	deleterious(0.727)	HMMPfam_Hid1
ICT1	3396	genome.wustl.edu	37	17	73017020	73017020	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001545.1	+1	reviewed	p.E181*	1.000	101	0%	169	34.9%	49	42.8%	-	-	-	HMMPfam_RF-1
ATP5H	10476	genome.wustl.edu	37	17	73038338	73038338	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006356.2	-1	reviewed	p.D53N	1.000	59	0%	140	38.6%	359	46.5%	benign(0.001)	tolerated(0.17)	neutral(0.059)	HMMPfam_Mt_ATP-synt_D
KCTD2	23510	genome.wustl.edu	37	17	73049153	73049153	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015353.1	+1	validated	p.R165W	1.000	152	0%	394	32.7%	17	41.1%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain
GGA3	23163	genome.wustl.edu	37	17	73239628	73239628	+	Missense_Mutation	SNP	C	C	A	rs60681847		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138619.2	-1	reviewed	p.E108D	1.000	159	0%	319	35.4%	11	54.5%	benign(0.013)	deleterious(0.04)	neutral(0.349)	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288
MRPS7	51081	genome.wustl.edu	37	17	73258680	73258680	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015971.3	+1	reviewed	p.E62D	0.905	76	0%	218	37.2%	92	43.4%	benign(0.007)	tolerated(0.24)	neutral(0.037)	superfamily_Ribosomal protein S7
SLC25A19	60386	genome.wustl.edu	37	17	73282737	73282737	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001126121.1	-1	reviewed	p.D37N	1.000	68	0%	194	29.9%	9	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr
ITGB4	3691	genome.wustl.edu	37	17	73725487	73725487	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000213.3	+1	reviewed	p.F236	0.270	82	0%	172	38.4%	87	41.3%	-	-	-	HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_vWA-like
ITGB4	3691	genome.wustl.edu	37	17	73732135	73732135	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000213.3	+1	reviewed	p.R554Q	1.000	106	0%	185	28.1%	120	60%	possibly_damaging(0.946)	tolerated(0.12)	deleterious(0.651)	HMMPfam_EGF_2,superfamily_EGF/Laminin
UNC13D	201294	genome.wustl.edu	37	17	73827221	73827221	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199242.2	-1	reviewed	p.G861	0.991	71	0%	135	31.9%	6	16.6%	-	-	-	HMMPfam_Membr_traf_MHD
UNC13D	201294	genome.wustl.edu	37	17	73839254	73839254	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199242.2	-1	reviewed	p.R83*	0.000	18	0%	29	37.9%	1	0%	-	-	-	NULL
MRPL38	64978	genome.wustl.edu	37	17	73895042	73895042	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032478.3	-1	reviewed	p.F344	1.000	32	0%	37	40.5%	112	41%	-	-	-	NULL
FBF1	85302	genome.wustl.edu	37	17	73913920	73913920	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080542.1	-1	provisional	p.R785W	1.000	42	0%	60	31.7%	2	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
ACOX1	51	genome.wustl.edu	37	17	73974773	73974773	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004035.6	-1	reviewed	p.E37D	0.996	71	0%	204	27%	12	50%	benign(0.008)	tolerated(0.08)	neutral(0.300)	superfamily_AcylCoA_dehyd_NM
SRP68	6730	genome.wustl.edu	37	17	74057228	74057228	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014230.2	-1	reviewed	p.E239D	1.000	122	0.8%	312	27.6%	44	36.3%	possibly_damaging(0.481)	tolerated(0.08)	neutral(0.460)	NULL
RNF157	114804	genome.wustl.edu	37	17	74163194	74163194	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052916.2	-1	validated	p.D153Y	1.000	40	0%	36	33.3%	1	0%	possibly_damaging(0.9)	tolerated(0.1)	deleterious(0.643)	NULL
PRPSAP1	5635	genome.wustl.edu	37	17	74307700	74307700	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002766.2	-1	validated	p.L361I	1.000	100	0%	189	35.4%	29	44.8%	benign(0.136)	tolerated(0.3)	neutral(0.040)	superfamily_PRTase-like
UBE2O	63893	genome.wustl.edu	37	17	74392422	74392422	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022066.3	-1	validated	p.K866E	1.000	126	0%	163	36.8%	15	46.6%	probably_damaging(0.993)	tolerated(0.47)	neutral(0.461)	NULL
AANAT	15	genome.wustl.edu	37	17	74465259	74465259	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001088.2	+1	reviewed	p.F56L	0.999	98	0%	109	33%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Acyl_CoA_acyltransferase
ST6GALNAC1	55808	genome.wustl.edu	37	17	74621543	74621543	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018414.3	-1	validated	p.W558R	0.915	87	0%	160	34.4%	113	45.1%	probably_damaging(0.995)	tolerated(0.07)	deleterious(0.776)	HMMPfam_Glyco_transf_29
JMJD6	23210	genome.wustl.edu	37	17	74721681	74721681	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001081461.1	-1	reviewed	p.P129L	1.000	162	0%	338	32.2%	36	38.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Clavaminate synthase-like
MGAT5B	146664	genome.wustl.edu	37	17	74869037	74869037	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198955.1	+1	validated	p.R69H	1.000	108	0.9%	181	24.3%	1	100%	benign(0.064)	deleterious(0.01)	neutral(0.410)	NULL
SEC14L1	6397	genome.wustl.edu	37	17	75186929	75186929	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039573.2	+1	reviewed	p.F36	1.000	94	0%	183	30.1%	20	45%	-	-	-	HMMPfam_PRELI
SEPT9	10801	genome.wustl.edu	37	17	75471796	75471796	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113495.1	+1	reviewed	p.R66C	0.000	52	0%	84	26.2%	0	-	unknown(0)	-	-	NULL
SEPT9	10801	genome.wustl.edu	37	17	75478396	75478396	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113491.1	+1	reviewed	p.E298K	1.000	28	0%	51	23.5%	124	23.3%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases
ENSG00000204283	0	genome.wustl.edu	37	17	75878269	75878269	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000374983	-1	known	p.Q68H	0.000	541	0%	1282	32.6%	0	-	possibly_damaging(0.653)	-	-	NULL
TNRC6C	57690	genome.wustl.edu	37	17	76063847	76063847	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142640.1	+1	validated	p.S871Y	1.000	188	0%	281	34.2%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	HMMPfam_Ago_hook
TMC8	147138	genome.wustl.edu	37	17	76129622	76129622	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000301627	+1	known	p.R223*	0.073	42	0%	71	35.2%	1	0%	-	-	-	NULL
PGS1	9489	genome.wustl.edu	37	17	76399861	76399861	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024419.3	+1	provisional	p.D365N	1.000	93	0%	170	35.3%	20	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DNAH17	8632	genome.wustl.edu	37	17	76451802	76451802	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000389840	-1	known	p.Y3351C	1.000	78	0%	118	32.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
DNAH17	8632	genome.wustl.edu	37	17	76510861	76510861	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000389840	-1	known	p.T1366A	1.000	45	0%	82	45.1%	0	-	possibly_damaging(0.582)	deleterious(0.01)	deleterious(0.606)	HMMPfam_DHC_N2
DNAH17	8632	genome.wustl.edu	37	17	76533412	76533412	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000389840	-1	known	p.P943H	1.000	73	0%	116	28.4%	0	-	possibly_damaging(0.948)	tolerated(0.12)	deleterious(0.651)	NULL
DNAH17	8632	genome.wustl.edu	37	17	76570944	76570944	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000389840	-1	known	p.L66	0.999	168	0%	246	38.6%	0	-	-	-	-	NULL
USP36	57602	genome.wustl.edu	37	17	76795780	76795780	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025090.3	-1	validated	p.K1031N	0.163	110	0%	206	34.5%	28	39.2%	probably_damaging(0.976)	deleterious(0)	deleterious(0.863)	NULL
C1QTNF1	114897	genome.wustl.edu	37	17	77042739	77042739	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030968.2	+1	validated	p.A86	0.003	44	0%	65	18.5%	3	0%	-	-	-	NULL
C1QTNF1	114897	genome.wustl.edu	37	17	77044048	77044048	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030968.2	+1	validated	p.E242*	0.988	68	0%	119	42.9%	15	0%	-	-	-	HMMPfam_C1q,HMMSmart_C1Q,superfamily_TNF_like
CCDC40	55036	genome.wustl.edu	37	17	78023737	78023737	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017950.2	+1	validated	p.K296N	0.994	72	0%	130	36.9%	15	33.3%	possibly_damaging(0.783)	deleterious(0.04)	deleterious(0.642)	NULL
CCDC40	55036	genome.wustl.edu	37	17	78055498	78055498	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017950.2	+1	validated	p.C572	0.865	20	0%	47	36.2%	10	10%	-	-	-	NULL
EIF4A3	9775	genome.wustl.edu	37	17	78117975	78117975	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014740.3	-1	reviewed	p.A80T	0.986	113	0%	245	41.6%	117	39.3%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540
CARD14	79092	genome.wustl.edu	37	17	78163590	78163590	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024110.2	+1	reviewed	p.A294	0.936	15	0%	15	40%	0	-	-	-	-	NULL
CARD14	79092	genome.wustl.edu	37	17	78169103	78169103	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024110.2	+1	reviewed	p.E490D	0.648	46	0%	49	24.5%	0	-	benign(0.001)	tolerated(0.08)	neutral(0.300)	NULL
RNF213	57674	genome.wustl.edu	37	17	78269422	78269422	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020954.2	+1	validated	p.T607	0.000	120	0%	316	32.9%	4	50%	-	-	-	NULL
RNF213	57674	genome.wustl.edu	37	17	78313383	78313383	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000508628	+1	known	p.R1739M	0.000	36	0%	103	34%	3	66.6%	possibly_damaging(0.512)	-	-	NULL
RNF213	57674	genome.wustl.edu	37	17	78318619	78318619	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000508628	+1	known	p.E2162K	0.716	122	0%	249	36.9%	2	100%	possibly_damaging(0.892)	tolerated(0.2)	neutral(0.400)	NULL
RNF213	57674	genome.wustl.edu	37	17	78320271	78320271	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000508628	+1	known	p.P2712	0.058	41	0%	54	29.6%	3	0%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
ENSG00000237199	0	genome.wustl.edu	37	17	78326947	78326947	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000437954	-1	known	p.L25F	0.000	18	0%	31	32.3%	4	0%	-	-	-	NULL
RPTOR	57521	genome.wustl.edu	37	17	78811749	78811749	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020761.2	+1	reviewed	p.I388	0.809	88	0%	128	39.1%	10	50%	-	-	-	NULL
AATK	9625	genome.wustl.edu	37	17	79101673	79101673	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080395.2	-1	reviewed	p.A151D	1.000	40	0%	47	34%	0	-	benign(0.186)	deleterious(0.03)	neutral(0.382)	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),PatternScan_PROTEIN_KINASE_ATP
AZI1	22994	genome.wustl.edu	37	17	79168754	79168754	+	Nonsense_Mutation	SNP	C	C	A	rs34085091		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014984.2	-1	validated	p.E679*	1.000	177	0%	229	28.4%	12	16.6%	-	-	-	NULL
AZI1	22994	genome.wustl.edu	37	17	79173629	79173629	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014984.2	-1	validated	p.R305W	1.000	26	0%	12	50%	8	12.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PDE6G	5148	genome.wustl.edu	37	17	79617928	79617928	+	RNA	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026872.1	-1	reviewed	NULL	0.000	9	0.000	23	0.435	1	0%	-	-	-	-
P4HB	5034	genome.wustl.edu	37	17	79817097	79817097	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000918.3	-1	reviewed	p.F104L	1.000	82	0%	133	21.1%	921	33.1%	possibly_damaging(0.687)	tolerated(0.16)	neutral(0.305)	superfamily_Thioredoxin-like,HMMPfam_Thioredoxin
SIRT7	51547	genome.wustl.edu	37	17	79871681	79871681	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016538.1	-1	reviewed	p.E325K	0.997	45	0%	57	21.1%	32	46.8%	benign(0.003)	tolerated(1)	-	superfamily_DHS-like NAD/FAD-binding domain
ASPSCR1	79058	genome.wustl.edu	37	17	79943386	79943386	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024083.2	+1	reviewed	p.R93C	0.972	109	0%	192	31.2%	41	48.7%	unknown(0)	deleterious(0.02)	-	NULL
DUS1L	64118	genome.wustl.edu	37	17	80017870	80017870	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022156.3	-1	validated	p.K374N	1.000	249	0%	327	32.1%	152	44.7%	probably_damaging(0.997)	deleterious(0.05)	deleterious(0.811)	NULL
FASN	2194	genome.wustl.edu	37	17	80045864	80045864	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004104.4	-1	reviewed	p.F944	0.972	20	0%	43	25.6%	55	50.9%	-	-	-	NULL
CSNK1D	1453	genome.wustl.edu	37	17	80203901	80203901	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139062.1	-1	reviewed	p.F404	1.000	98	0%	176	34.7%	130	48.4%	-	-	-	NULL
CSNK1D	1453	genome.wustl.edu	37	17	80209401	80209401	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001893.3	-1	reviewed	p.E247K	1.000	84	0%	233	38.6%	129	54.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
C17orf101	79701	genome.wustl.edu	37	17	80363250	80363250	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175902.4	-1	validated	p.F165	0.973	65	0%	112	33%	16	62.5%	-	-	-	HMMSmart_SM00702
FN3KRP	79672	genome.wustl.edu	37	17	80684402	80684402	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024619.3	+1	validated	p.R172H	1.000	163	0%	247	39.3%	31	41.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Kinase_like
TBCD	6904	genome.wustl.edu	37	17	80726397	80726397	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005993.4	+1	reviewed	p.G179	0.250	188	0%	404	32.9%	15	60%	-	-	-	superfamily_ARM repeat
ZNF750	79755	genome.wustl.edu	37	17	80788421	80788421	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024702.2	-1	reviewed	p.S590F	0.002	60	0%	75	38.7%	27	22.2%	probably_damaging(0.959)	deleterious(0.01)	deleterious(0.808)	NULL
TBCD	6904	genome.wustl.edu	37	17	80895195	80895195	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005993.4	+1	reviewed	p.K1080N	0.981	122	0%	202	33.2%	77	16.8%	benign(0.282)	tolerated(0.08)	neutral(0.386)	superfamily_ARM repeat
B3GNTL1	146712	genome.wustl.edu	37	17	80904842	80904842	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009905.1	-1	validated	p.A341	0.974	74	0%	92	32.6%	6	0%	-	-	-	NULL
USP14	9097	genome.wustl.edu	37	18	203144	203144	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005151.3	+1	reviewed	p.R330Q	1.000	149	0%	145	28.3%	26	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_UCH,superfamily_SSF54001
COLEC12	81035	genome.wustl.edu	37	18	331680	331680	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130386.2	-1	validated	p.S684Y	0.002	198	0%	213	36.2%	12	0%	probably_damaging(0.953)	-	-	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
COLEC12	81035	genome.wustl.edu	37	18	333084	333084	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130386.2	-1	validated	p.E626*	0.988	115	0%	169	33.1%	0	-	-	-	-	HMMPfam_Lectin_C,HMMSmart_SM00034,superfamily_C-type lectin-like
ENOSF1	55556	genome.wustl.edu	37	18	697289	697289	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_202758.2	-1	validated	p.D108A	0.995	197	0%	281	30.6%	1	0%	benign(0.253)	tolerated(0.18)	neutral(0.082)	HMMPfam_MR_MLE_N,superfamily_SSF54826
ADCYAP1	116	genome.wustl.edu	37	18	908291	908291	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099733.1	+1	reviewed	p.E90K	0.999	24	0%	21	52.4%	0	-	benign(0)	tolerated(1)	-	HMMPfam_Hormone_2,HMMSmart_GLUCA
METTL4	64863	genome.wustl.edu	37	18	2563848	2563848	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022840.3	-1	validated	p.R136I	1.000	203	0%	356	29.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
NDC80	10403	genome.wustl.edu	37	18	2616499	2616499	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006101.2	+1	validated	p.L619I	1.000	64	0%	79	35.4%	18	50%	possibly_damaging(0.485)	tolerated(0.18)	neutral(0.217)	NULL
SMCHD1	23347	genome.wustl.edu	37	18	2726449	2726449	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015295.2	+1	validated	e22-1	1.000	79	0%	57	22.8%	0	-	-	-	-	-
EMILIN2	84034	genome.wustl.edu	37	18	2908948	2908948	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032048.2	+1	validated	p.P890	0.905	237	0%	365	33.2%	2	0%	-	-	-	NULL
LPIN2	9663	genome.wustl.edu	37	18	2921613	2921613	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014646.2	-1	reviewed	p.K787R	1.000	104	0%	173	28.9%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_LNS2,HMMSmart_LNS2,superfamily_SSF56784
MYOM1	8736	genome.wustl.edu	37	18	3067449	3067449	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003803.3	-1	reviewed	p.F1623	0.053	48	0%	96	27.1%	2	50%	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
MYOM1	8736	genome.wustl.edu	37	18	3094275	3094275	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003803.3	-1	reviewed	p.E1253*	1.000	163	0%	264	29.9%	2	0%	-	-	-	HMMSmart_SM00409,superfamily_Immunoglobulin
MYOM1	8736	genome.wustl.edu	37	18	3100370	3100370	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003803.3	-1	reviewed	p.C1210	0.983	169	0.6%	285	35.4%	1	0%	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
MYOM1	8736	genome.wustl.edu	37	18	3131413	3131413	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003803.3	-1	reviewed	p.Y822*	1.000	196	0%	246	28%	0	-	-	-	-	HMMPfam_fn3,superfamily_Fibronectin type III
MYOM1	8736	genome.wustl.edu	37	18	3164279	3164279	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003803.3	-1	reviewed	p.R500*	1.000	137	0%	210	32.9%	0	-	-	-	-	HMMSmart_SM00409,superfamily_Immunoglobulin
DLGAP1	9229	genome.wustl.edu	37	18	3582195	3582195	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004746.2	-1	provisional	p.R548I	1.000	295	0%	779	31.7%	2	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
DLGAP1	9229	genome.wustl.edu	37	18	3729346	3729346	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004746.2	-1	provisional	p.F460	0.987	34	0%	28	25%	1	100%	-	-	-	NULL
ZFP161	7541	genome.wustl.edu	37	18	5291576	5291576	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143823.1	-1	validated	p.R211W	0.424	113	0%	121	38.8%	8	62.5%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
EPB41L3	23136	genome.wustl.edu	37	18	5397189	5397189	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012307.2	-1	provisional	p.E903D	1.000	127	0%	117	34.2%	1	0%	probably_damaging(0.995)	tolerated(0.23)	deleterious(0.499)	NULL
L3MBTL4	91133	genome.wustl.edu	37	18	6239724	6239724	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173464.3	-1	validated	p.D234N	1.000	189	0%	427	30.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MBT,HMMSmart_MBT,superfamily_SSF63748
L3MBTL4	91133	genome.wustl.edu	37	18	6241449	6241449	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173464.3	-1	validated	e6-1	1.000	98	0%	88	31.8%	0	-	-	-	-	-
L3MBTL4	91133	genome.wustl.edu	37	18	6263987	6263987	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173464.3	-1	validated	p.E60*	0.990	144	0%	166	34.3%	0	-	-	-	-	HMMSmart_MBT,superfamily_SSF63748
ARHGAP28	79822	genome.wustl.edu	37	18	6850870	6850870	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000383472	+1	known	p.E3*	0.000	16	0%	23	39.1%	0	-	-	-	-	NULL
ARHGAP28	79822	genome.wustl.edu	37	18	6868200	6868200	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010000.1	+1	validated	p.E101K	0.005	316	0%	360	35%	0	-	benign(0)	tolerated(0.26)	neutral(0.034)	NULL
ARHGAP28	79822	genome.wustl.edu	37	18	6873407	6873407	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010000.1	+1	validated	e6-1	1.000	234	0%	245	23.7%	0	-	-	-	-	-
ARHGAP28	79822	genome.wustl.edu	37	18	6896576	6896576	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010000.1	+1	validated	p.N502D	1.000	152	0%	266	38.3%	0	-	benign(0.007)	tolerated(0.42)	neutral(0.014)	NULL
LAMA1	284217	genome.wustl.edu	37	18	6973117	6973117	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005559.2	-1	validated	p.N2238T	0.179	383	0%	617	34.5%	1	0%	benign(0)	tolerated(1)	-	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_1
LAMA1	284217	genome.wustl.edu	37	18	6992626	6992626	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005559.2	-1	validated	p.S1701Y	0.211	236	0%	276	35.1%	0	-	possibly_damaging(0.791)	deleterious(0.04)	deleterious(0.645)	superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_I
PTPRM	5797	genome.wustl.edu	37	18	8076493	8076493	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105244.1	+1	reviewed	p.T494	0.998	216	0%	159	37.1%	4	0%	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
RAB12	201475	genome.wustl.edu	37	18	8633288	8633288	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025300.2	+1	validated	p.F130C	1.000	225	0%	457	34.1%	11	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_RAB,HMMPfam_Ras,superfamily_SSF52540
SOGA2	23255	genome.wustl.edu	37	18	8825193	8825193	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015210.3	+1	predicted	p.G1229S	0.003	25	0%	17	35.3%	3	33.3%	benign(0.005)	deleterious(0.02)	neutral(0.383)	NULL
ANKRD12	23253	genome.wustl.edu	37	18	9255459	9255459	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015208.3	+1	validated	p.D732Y	1.000	87	0%	71	25.4%	1	0%	unknown(0)	-	-	superfamily_Ankyrin repeat
ANKRD12	23253	genome.wustl.edu	37	18	9256801	9256801	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015208.3	+1	validated	p.S1179Y	0.000	30	0%	21	19%	1	0%	possibly_damaging(0.46)	deleterious(0.03)	deleterious(0.515)	superfamily_Ankyrin repeat
TWSG1	57045	genome.wustl.edu	37	18	9399433	9399433	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020648.5	+1	validated	p.R194C	1.000	193	0%	268	29.9%	9	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Tsg
RALBP1	10928	genome.wustl.edu	37	18	9517138	9517138	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006788.3	+1	validated	p.Q180H	0.961	88	0%	235	26.8%	31	48.3%	possibly_damaging(0.593)	tolerated(0.11)	deleterious(0.477)	NULL
PPP4R1	9989	genome.wustl.edu	37	18	9550296	9550296	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042388.1	-1	validated	p.R798C	1.000	208	0.5%	301	31.6%	38	42.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_HEAT,superfamily_ARM repeat
APCDD1	147495	genome.wustl.edu	37	18	10454982	10454982	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153000.4	+1	validated	p.S2P	0.939	17	0.000	9	0.556	20	30%	benign(0.045)	tolerated(0.35)	neutral(0.023)	NULL
PIEZO2	63895	genome.wustl.edu	37	18	10677825	10677825	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000503781	-1	known	p.S448Y	0.998	197	0%	210	28.1%	0	-	benign(0.223)	tolerated(1)	neutral(0.022)	NULL
ENSG00000168738	0	genome.wustl.edu	37	18	10803903	10803903	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000302079	-1	known	p.Y262	0.148	242	0%	261	26.8%	0	-	-	-	-	NULL
SLC35G4	646000	genome.wustl.edu	37	18	11644428	11644428	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000424015	+1	known	p.L207F	0.294	131	0%	186	48.4%	0	-	-	-	-	NULL
GNAL	2774	genome.wustl.edu	37	18	11824922	11824922	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182978.2	+1	validated	p.F210L	1.000	114	0%	222	40.5%	1	0%	possibly_damaging(0.896)	tolerated(0.78)	neutral(0.354)	HMMPfam_G-alpha,superfamily_Transducn_insert,superfamily_SSF52540
AFG3L2	10939	genome.wustl.edu	37	18	12337375	12337375	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006796.1	-1	reviewed	p.A714T	0.015	197	0%	364	35.4%	28	32.1%	benign(0)	tolerated(0.2)	neutral(0.049)	HMMPfam_Peptidase_M41
SPIRE1	56907	genome.wustl.edu	37	18	12479730	12479730	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128626.1	-1	validated	p.T458A	0.852	168	0%	198	32.8%	7	28.5%	benign(0.128)	tolerated(0.06)	neutral(0.333)	NULL
CEP76	79959	genome.wustl.edu	37	18	12697395	12697395	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024899.2	-1	provisional	p.R178I	1.000	127	0%	239	33.5%	1	100%	possibly_damaging(0.711)	tolerated(0.06)	deleterious(0.580)	NULL
PTPN2	5771	genome.wustl.edu	37	18	12836816	12836816	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002828.2	-1	reviewed	p.A79T	1.000	411	0%	586	28.7%	6	50%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,superfamily_(Phosphotyrosine protein) phosphatases II
SEH1L	81929	genome.wustl.edu	37	18	12984126	12984126	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013437.1	+1	reviewed	p.N336T	1.000	210	0%	311	29.6%	36	58.3%	benign(0)	tolerated(0.63)	neutral(0.004)	NULL
FAM210A	125228	genome.wustl.edu	37	18	13681792	13681792	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098801.1	-1	validated	p.V95	0.000	338	0%	467	34.3%	3	100%	-	-	-	NULL
RNMT	8731	genome.wustl.edu	37	18	13741530	13741530	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003799.1	+1	provisional	p.R272C	0.787	243	0%	272	36%	8	12.5%	possibly_damaging(0.951)	tolerated(0.07)	deleterious(0.713)	HMMPfam_Pox_MCEL,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
MC2R	4158	genome.wustl.edu	37	18	13885271	13885271	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000529.2	-1	reviewed	p.L83M	1.000	150	0%	206	29.1%	0	-	benign(0.264)	tolerated(0.36)	neutral(0.048)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ENSG00000252234	0	genome.wustl.edu	37	18	14118668	14118668	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000516425	-1	novel	NULL	0.012	51	0%	65	33.8%	0	-	-	-	-	-
LOC646359	646359	genome.wustl.edu	37	18	14377602	14377602	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_929288.3	-1	model	p.K387	1.000	92	0%	168	27.4%	0	-	-	-	-	HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_Myb_DNA-binding
LOC646359	646359	genome.wustl.edu	37	18	14378685	14378685	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_929288.3	-1	model	p.F26	0.002	25	0%	14	28.6%	0	-	-	-	-	NULL
ANKRD30B	374860	genome.wustl.edu	37	18	14763733	14763733	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145029.1	+1	validated	p.R290I	0.008	79	0%	92	29.3%	0	-	possibly_damaging(0.951)	tolerated(0.08)	deleterious(0.694)	NULL
ENSG00000180777	0	genome.wustl.edu	37	18	14810129	14810129	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000320584	+1	known	p.S135Y	0.002	209	0%	145	26.2%	0	-	probably_damaging(0.964)	deleterious(0)	deleterious(0.851)	NULL
ENSG00000180777	0	genome.wustl.edu	37	18	14810149	14810149	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000320584	+1	known	p.E142*	0.002	170	0%	105	28.6%	0	-	-	-	-	NULL
ANKRD30B	374860	genome.wustl.edu	37	18	14850237	14850237	+	Missense_Mutation	SNP	G	G	T	rs9748833	byCluster;byFrequency;by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145029.1	+1	validated	p.E1021D	0.976	49	0%	52	34.6%	1	0%	probably_damaging(0.985)	deleterious(0.02)	deleterious(0.815)	NULL
ANKRD30B	374860	genome.wustl.edu	37	18	14851748	14851748	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145029.1	+1	validated	p.V1150F	0.954	83	0%	120	23.3%	0	-	probably_damaging(0.996)	tolerated(0.69)	neutral(0.464)	NULL
ROCK1	6093	genome.wustl.edu	37	18	18533611	18533611	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005406.2	-1	reviewed	p.R1330Q	1.000	209	0%	326	37.4%	11	54.5%	probably_damaging(0.975)	deleterious(0.02)	deleterious(0.800)	NULL
ROCK1	6093	genome.wustl.edu	37	18	18539847	18539847	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005406.2	-1	reviewed	p.E1156K	1.000	162	0%	170	20%	10	30%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
ROCK1	6093	genome.wustl.edu	37	18	18546980	18546980	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005406.2	-1	reviewed	p.E1084*	1.000	223	0%	317	35%	5	40%	-	-	-	NULL
ROCK1	6093	genome.wustl.edu	37	18	18547829	18547829	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005406.2	-1	reviewed	p.D1026Y	1.000	284	0.4%	400	31%	7	14.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ROCK1	6093	genome.wustl.edu	37	18	18547865	18547865	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005406.2	-1	reviewed	p.D1014Y	1.000	216	0%	260	31.9%	3	0%	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	HMMPfam_Rho_Binding
GREB1L	80000	genome.wustl.edu	37	18	18975357	18975357	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142966.1	+1	provisional	p.A123T	1.000	113	0%	193	25.4%	0	-	unknown(0)	deleterious(0)	-	NULL
ESCO1	114799	genome.wustl.edu	37	18	19140927	19140927	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052911.2	-1	validated	p.A616T	1.000	174	0%	212	27.4%	6	66.6%	possibly_damaging(0.661)	tolerated(0.06)	deleterious(0.556)	NULL
ESCO1	114799	genome.wustl.edu	37	18	19153644	19153644	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052911.2	-1	validated	p.K387N	1.000	131	0%	187	35.8%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ESCO1	114799	genome.wustl.edu	37	18	19154775	19154775	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052911.2	-1	validated	p.E10D	1.000	191	0%	285	31.9%	0	-	probably_damaging(0.955)	deleterious(0.05)	deleterious(0.744)	NULL
MIB1	57534	genome.wustl.edu	37	18	19345793	19345793	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020774.2	+1	validated	p.R97Q	1.000	90	0%	175	31.4%	1	0%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1
MIB1	57534	genome.wustl.edu	37	18	19345880	19345880	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020774.2	+1	validated	p.R126Q	1.000	121	0%	213	36.2%	2	50%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
GATA6	2627	genome.wustl.edu	37	18	19762767	19762767	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005257.3	+1	validated	p.R493Q	1.000	136	0%	188	26.6%	8	37.5%	unknown(0)	deleterious(0)	-	superfamily_Glucocorticoid receptor-like (DNA-binding domain)
CTAGE1	64693	genome.wustl.edu	37	18	19995616	19995616	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172241.2	-1	validated	p.R720I	0.021	84	0%	146	37%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CTAGE1	64693	genome.wustl.edu	37	18	19995860	19995860	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172241.2	-1	validated	p.L639I	0.383	110	0%	130	30%	0	-	benign(0.007)	tolerated(0.07)	neutral(0.319)	NULL
CTAGE1	64693	genome.wustl.edu	37	18	19996515	19996515	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172241.2	-1	validated	p.K420N	0.002	125	0%	120	33.3%	0	-	benign(0)	tolerated(0.68)	neutral(0.002)	NULL
CTAGE1	64693	genome.wustl.edu	37	18	19997471	19997471	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172241.2	-1	validated	p.E102K	0.034	135	0%	205	65.9%	0	-	possibly_damaging(0.58)	tolerated(0.12)	neutral(0.460)	NULL
CTAGE1	64693	genome.wustl.edu	37	18	19997691	19997691	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172241.2	-1	validated	p.F28L	0.010	328	0.3%	472	33.3%	0	-	benign(0.028)	deleterious(0.04)	neutral(0.350)	NULL
NPC1	4864	genome.wustl.edu	37	18	21124483	21124483	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000271.4	-1	reviewed	p.S652L	1.000	117	0.9%	209	30.6%	7	42.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Patched,superfamily_SSF82866
LAMA3	3909	genome.wustl.edu	37	18	21402321	21402321	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198129.1	+1	reviewed	p.T804P	0.883	178	0%	196	40.8%	2	0%	benign(0.372)	tolerated(0.24)	neutral(0.156)	NULL
LAMA3	3909	genome.wustl.edu	37	18	21501419	21501419	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198129.1	+1	reviewed	p.Q2683K	0.001	133	0%	192	32.3%	7	14.2%	benign(0.055)	tolerated(1)	neutral(0.004)	HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
LAMA3	3909	genome.wustl.edu	37	18	21513771	21513771	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198129.1	+1	reviewed	p.D2912Y	0.047	268	0%	359	11.4%	9	22.2%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	superfamily_Concanavalin A-like lectins/glucanases
TTC39C	125488	genome.wustl.edu	37	18	21644103	21644103	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135993.1	+1	validated	e2-1	1.000	343	0%	448	33.5%	0	-	-	-	-	-
TTC39C	125488	genome.wustl.edu	37	18	21644127	21644127	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135993.1	+1	validated	p.F64C	1.000	390	0%	493	40.8%	1	100%	probably_damaging(0.983)	tolerated(0.12)	deleterious(0.690)	HMMPfam_Deme6
TTC39C	125488	genome.wustl.edu	37	18	21705398	21705398	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001135993.1	+1	validated	p.R435Q	1.000	154	0%	202	33.7%	12	33.3%	benign(0.061)	tolerated(0.37)	neutral(0.023)	HMMPfam_Deme6,superfamily_TPR-like
OSBPL1A	114876	genome.wustl.edu	37	18	21759717	21759717	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080597.2	-1	reviewed	p.T632I	1.000	135	0%	213	26.3%	5	20%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Oxysterol_BP
OSBPL1A	114876	genome.wustl.edu	37	18	21819200	21819200	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080597.2	-1	reviewed	p.F476L	1.000	224	0%	259	27.8%	2	0%	benign(0.232)	deleterious(0.01)	neutral(0.429)	NULL
IMPACT	55364	genome.wustl.edu	37	18	22020541	22020541	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018439.3	+1	validated	p.S150L	0.000	215	0%	311	36.7%	10	70%	benign(0.121)	tolerated(0.34)	neutral(0.033)	NULL
IMPACT	55364	genome.wustl.edu	37	18	22029882	22029882	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018439.3	+1	validated	p.N287H	1.000	153	0%	223	29.6%	9	22.2%	probably_damaging(0.992)	deleterious(0.04)	deleterious(0.796)	HMMPfam_UPF0029,superfamily_Ribosomal protein S5 domain 2-like
TAF4B	6875	genome.wustl.edu	37	18	23847569	23847569	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005640.1	+1	validated	p.P193	0.148	103	0%	235	31.5%	0	-	-	-	-	NULL
TAF4B	6875	genome.wustl.edu	37	18	23865964	23865964	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005640.1	+1	validated	p.S364Y	0.863	84	0%	96	37.5%	1	0%	benign(0.293)	deleterious(0.01)	deleterious(0.496)	NULL
TAF4B	6875	genome.wustl.edu	37	18	23906992	23906992	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005640.1	+1	validated	p.Y716C	1.000	195	0%	364	32.7%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TAF4
KCTD1	284252	genome.wustl.edu	37	18	24039876	24039876	+	Nonsense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142730.1	-1	validated	p.L716*	1.000	50	0%	81	33.3%	17	5.8%	-	-	-	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain
DSC3	1825	genome.wustl.edu	37	18	28605805	28605805	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001941.3	-1	reviewed	p.N184T	0.999	154	0%	97	38.1%	2	50%	probably_damaging(0.998)	deleterious(0.05)	deleterious(0.820)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DSC3	1825	genome.wustl.edu	37	18	28609589	28609589	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001941.3	-1	reviewed	p.S120	0.003	112	0%	109	29.4%	2	100%	-	-	-	superfamily_Cadherin-like
DSC1	1823	genome.wustl.edu	37	18	28714741	28714741	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024421.2	-1	reviewed	p.R557Q	1.000	134	0%	120	26.7%	0	-	probably_damaging(0.998)	deleterious(0.05)	deleterious(0.820)	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DSC1	1823	genome.wustl.edu	37	18	28728519	28728519	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024421.2	-1	reviewed	p.N238	1.000	268	0.4%	334	34.1%	0	-	-	-	-	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like
DSC1	1823	genome.wustl.edu	37	18	28736074	28736074	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024421.2	-1	reviewed	p.R135*	0.993	157	0%	263	31.2%	0	-	-	-	-	superfamily_Cadherin-like
DSG1	1828	genome.wustl.edu	37	18	28911707	28911707	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001942.2	+1	reviewed	p.P187	1.000	137	0%	85	32.9%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Cadherin-like
DSG1	1828	genome.wustl.edu	37	18	28919769	28919769	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001942.2	+1	reviewed	p.D490N	0.000	126	0%	160	32.5%	0	-	benign(0.005)	tolerated(0.81)	neutral(0.001)	HMMSmart_SM00112
DSG4	147409	genome.wustl.edu	37	18	28972152	28972152	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134453.1	+1	reviewed	p.S285L	0.997	251	0%	191	30.9%	0	-	probably_damaging(0.994)	tolerated(0.18)	deleterious(0.508)	HMMPfam_Cadherin,superfamily_Cadherin
DSG4	147409	genome.wustl.edu	37	18	28980878	28980878	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134453.1	+1	reviewed	p.K438*	1.000	113	0.9%	68	25%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
DSG3	1830	genome.wustl.edu	37	18	29041200	29041200	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001944.2	+1	reviewed	p.R275H	0.000	165	0%	135	34.8%	0	-	benign(0.007)	tolerated(0.16)	neutral(0.059)	HMMPfam_Cadherin,superfamily_Cadherin
DSG3	1830	genome.wustl.edu	37	18	29055684	29055684	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001944.2	+1	reviewed	p.A821T	0.000	291	0%	427	30.7%	1	0%	benign(0.012)	tolerated(0.59)	neutral(0.005)	NULL
DSG3	1830	genome.wustl.edu	37	18	29056132	29056132	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001944.2	+1	reviewed	p.S970Y	0.156	124	0%	189	28.6%	0	-	possibly_damaging(0.921)	tolerated(0.12)	deleterious(0.631)	NULL
DSG2	1829	genome.wustl.edu	37	18	29126100	29126100	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001943.3	+1	reviewed	p.A917	0.004	72	0%	94	35.1%	49	61.2%	-	-	-	NULL
FAM59A	64762	genome.wustl.edu	37	18	29890200	29890200	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022751.1	-1	provisional	p.P117S	1.000	268	0%	356	36.8%	1	100%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	NULL
ASXL3	80816	genome.wustl.edu	37	18	31318522	31318522	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030632.1	+1	provisional	p.S385Y	0.976	150	0%	112	35.7%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
ASXL3	80816	genome.wustl.edu	37	18	31319774	31319774	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030632.1	+1	provisional	p.K802N	0.005	95	0%	78	26.9%	0	-	benign(0.002)	deleterious(0)	neutral(0.445)	NULL
NOL4	8715	genome.wustl.edu	37	18	31803205	31803205	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003787.3	-1	validated	p.R5C	1.000	123	0.8%	96	29.2%	0	-	possibly_damaging(0.886)	deleterious(0.02)	deleterious(0.730)	NULL
DTNA	1837	genome.wustl.edu	37	18	32418116	32418116	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001390.4	+1	reviewed	p.A385S	0.858	218	0%	169	36.1%	0	-	benign(0)	tolerated(0.77)	neutral(0.001)	NULL
ZSCAN30	100101467	genome.wustl.edu	37	18	32844238	32844238	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001112734.2	-1	validated	p.E27*	0.951	38	0%	30	40%	2	50%	-	-	-	NULL
ZNF24	7572	genome.wustl.edu	37	18	32917323	32917323	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006965.2	-1	validated	p.R327I	1.000	200	0%	129	27.1%	7	42.8%	benign(0.412)	tolerated(0.1)	neutral(0.419)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF396	252884	genome.wustl.edu	37	18	32949318	32949318	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145756.2	-1	validated	p.R290Q	0.000	145	0%	207	35.7%	1	0%	possibly_damaging(0.922)	tolerated(0.41)	neutral(0.387)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF396	252884	genome.wustl.edu	37	18	32949578	32949578	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145756.2	-1	validated	p.K203N	0.016	188	0%	296	32.8%	2	50%	probably_damaging(0.98)	deleterious(0.04)	deleterious(0.773)	NULL
GALNT1	2589	genome.wustl.edu	37	18	33263417	33263417	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020474.3	+1	reviewed	p.R182*	1.000	196	0.5%	169	27.8%	12	0%	-	-	-	HMMPfam_Glycos_transf_2,superfamily_Nucleotide-diphospho-sugar transferases
ELP2	55250	genome.wustl.edu	37	18	33734888	33734888	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018255.1	+1	provisional	p.E401*	1.000	227	0%	307	29.3%	20	10%	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
FHOD3	80206	genome.wustl.edu	37	18	34092435	34092435	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025135.2	+1	validated	p.A147D	1.000	277	0%	377	29.4%	0	-	possibly_damaging(0.951)	tolerated(0.24)	neutral(0.431)	superfamily_ARM-type_fold
FHOD3	80206	genome.wustl.edu	37	18	34156465	34156465	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025135.2	+1	validated	p.R188H	1.000	286	0%	415	35.4%	0	-	benign(0)	tolerated(1)	-	superfamily_ARM-type_fold
FHOD3	80206	genome.wustl.edu	37	18	34298000	34298000	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025135.2	+1	validated	p.Q738	1.000	87	0%	105	31.4%	0	-	-	-	-	NULL
PIK3C3	5289	genome.wustl.edu	37	18	39576669	39576669	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002647.2	+1	validated	p.R320I	1.000	118	0%	82	36.6%	4	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PI3Ka,HMMSmart_PI3Ka,superfamily_ARM-type_fold
PIK3C3	5289	genome.wustl.edu	37	18	39609382	39609382	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002647.2	+1	validated	p.E562K	1.000	217	0%	262	36.3%	10	30%	possibly_damaging(0.469)	tolerated(0.27)	neutral(0.188)	superfamily_Kinase_like
PIK3C3	5289	genome.wustl.edu	37	18	39637885	39637885	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002647.2	+1	validated	p.R768W	0.999	71	0%	75	34.7%	25	32%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,superfamily_Kinase_like
PIK3C3	5289	genome.wustl.edu	37	18	39647367	39647367	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002647.2	+1	validated	p.R847C	1.000	208	0.5%	284	36.3%	29	48.2%	benign(0.276)	deleterious(0.04)	neutral(0.378)	HMMSmart_PI3Kc,superfamily_Kinase_like
SYT4	6860	genome.wustl.edu	37	18	40853645	40853645	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020783.3	-1	validated	p.R250I	1.000	128	0%	91	19.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
SETBP1	26040	genome.wustl.edu	37	18	42533094	42533094	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015559.2	+1	validated	p.Y1263*	1.000	135	0%	276	29.7%	0	-	-	-	-	NULL
SLC14A2	8170	genome.wustl.edu	37	18	43204733	43204733	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007163.3	+1	validated	p.P35L	1.000	88	0%	100	33%	0	-	benign(0.014)	tolerated(0.12)	neutral(0.261)	NULL
SLC14A2	8170	genome.wustl.edu	37	18	43205689	43205689	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007163.3	+1	validated	p.I64	0.912	102	0%	172	34.9%	0	-	-	-	-	NULL
SLC14A2	8170	genome.wustl.edu	37	18	43224100	43224100	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007163.3	+1	validated	p.S442	0.002	240	0%	403	33%	0	-	-	-	-	NULL
ATP5A1	498	genome.wustl.edu	37	18	43669849	43669849	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001937.1	-1	reviewed	p.P141	0.888	161	0%	466	31.8%	300	48%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
HAUS1	115106	genome.wustl.edu	37	18	43685234	43685234	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138443.3	+1	validated	p.E35D	0.989	126	0%	284	30.6%	26	53.8%	benign(0.001)	tolerated(0.53)	neutral(0.007)	NULL
C18orf25	147339	genome.wustl.edu	37	18	43796370	43796370	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145055.3	+1	validated	p.R175Q	1.000	58	0%	99	37.4%	10	20%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
LOXHD1	125336	genome.wustl.edu	37	18	44140501	44140501	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144612.6	-1	reviewed	p.A591V	1.000	23	0%	32	37.5%	0	-	possibly_damaging(0.609)	tolerated(0.5)	neutral(0.221)	HMMPfam_PLAT,superfamily_Lipase_LipOase
LOXHD1	125336	genome.wustl.edu	37	18	44146327	44146327	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144612.6	-1	reviewed	p.Q499R	1.000	60	0%	90	37.8%	0	-	benign(0.008)	tolerated(0.9)	-	HMMPfam_PLAT,HMMSmart_LH2,superfamily_Lipase_LipOase
ST8SIA5	29906	genome.wustl.edu	37	18	44260332	44260332	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013305.4	-1	reviewed	p.F268	1.000	66	1.5%	76	35.5%	0	-	-	-	-	HMMPfam_Glyco_transf_29
ST8SIA5	29906	genome.wustl.edu	37	18	44261939	44261939	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013305.4	-1	reviewed	p.E220*	1.000	76	0%	114	25.4%	0	-	-	-	-	HMMPfam_Glyco_transf_29
PIAS2	9063	genome.wustl.edu	37	18	44426737	44426737	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004671.2	-1	validated	p.S265Y	1.000	172	0%	203	26.1%	13	53.8%	probably_damaging(0.98)	tolerated(0.06)	deleterious(0.746)	NULL
PIAS2	9063	genome.wustl.edu	37	18	44470595	44470595	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004671.2	-1	validated	p.K149N	1.000	102	0%	193	32.1%	8	50%	probably_damaging(0.989)	deleterious(0.04)	deleterious(0.788)	NULL
TCEB3B	51224	genome.wustl.edu	37	18	44560023	44560023	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016427.2	-1	reviewed	p.R538I	0.000	65	0%	88	33%	1	0%	benign(0.349)	tolerated(0.16)	neutral(0.170)	NULL
TCEB3B	51224	genome.wustl.edu	37	18	44561554	44561554	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016427.2	-1	reviewed	p.E28*	0.000	234	0%	372	28%	0	-	-	-	-	HMMSmart_TFS2N,HMMPfam_TFIIS
KATNAL2	83473	genome.wustl.edu	37	18	44595969	44595969	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031303.2	+1	validated	p.R264W	1.000	115	0%	137	36.5%	5	80%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_AAA,HMMPfam_AAA,superfamily_SSF52540
SMAD2	4087	genome.wustl.edu	37	18	45422958	45422958	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003652.2	-1	reviewed	p.R57Q	1.000	545	0%	612	33.5%	21	42.8%	benign(0)	tolerated(0.79)	neutral(0.001)	HMMPfam_MH1,HMMSmart_SM00523,superfamily_SMAD MH1 domain
ZBTB7C	201501	genome.wustl.edu	37	18	45566720	45566720	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039360.1	-1	validated	p.P253	0.034	53	0%	51	45.1%	3	100%	-	-	-	NULL
SMAD7	4092	genome.wustl.edu	37	18	46447873	46447873	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005904.2	-1	provisional	p.E384K	1.000	94	1.1%	125	32%	24	29.1%	possibly_damaging(0.659)	tolerated(0.67)	neutral(0.235)	HMMPfam_MH2,HMMSmart_DWB,superfamily_SMAD_FHA
DYM	54808	genome.wustl.edu	37	18	46645263	46645263	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017653.3	-1	reviewed	p.R533*	1.000	269	0%	426	27.7%	27	7.4%	-	-	-	HMMPfam_Dymeclin
DYM	54808	genome.wustl.edu	37	18	46904951	46904951	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017653.3	-1	reviewed	p.S136Y	1.000	136	0%	100	32%	5	20%	benign(0.011)	tolerated(0.1)	neutral(0.287)	HMMPfam_Dymeclin
DYM	54808	genome.wustl.edu	37	18	46906063	46906063	+	Nonsense_Mutation	SNP	C	C	A	rs120074164		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017653.3	-1	reviewed	p.E87*	1.000	205	0%	185	25.9%	5	20%	-	-	-	HMMPfam_Dymeclin
RPL17	6139	genome.wustl.edu	37	18	47017231	47017231	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000985.3	-1	reviewed	p.D50Y	1.000	95	0%	239	28%	1636	41.1%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Ribosomal_L22,superfamily_Ribosomal protein L22
LIPG	9388	genome.wustl.edu	37	18	47113180	47113180	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006033.2	+1	reviewed	p.R481C	0.778	188	0%	273	31.5%	9	33.3%	benign(0.339)	deleterious(0.01)	deleterious(0.513)	HMMPfam_PLAT,HMMSmart_SM00308,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain)
CCDC11	220136	genome.wustl.edu	37	18	47764984	47764984	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145020.3	-1	validated	p.E435D	0.221	353	0%	536	31.7%	0	-	benign(0.018)	tolerated(0.06)	neutral(0.323)	NULL
SKA1	220134	genome.wustl.edu	37	18	47918600	47918600	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039535.2	+1	validated	p.R251C	1.000	86	0%	87	42.5%	10	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MAPK4	5596	genome.wustl.edu	37	18	48190709	48190709	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002747.3	+1	reviewed	p.K127N	1.000	41	0%	46	34.8%	0	-	possibly_damaging(0.658)	deleterious(0.05)	deleterious(0.578)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
SMAD4	4089	genome.wustl.edu	37	18	48573437	48573437	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005359.5	+1	reviewed	p.T7	0.665	117	0.9%	218	32.6%	12	50%	-	-	-	NULL
DCC	1630	genome.wustl.edu	37	18	50450079	50450079	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005215.3	+1	reviewed	p.P234T	1.000	157	0%	115	33.9%	0	-	benign(0.001)	tolerated(0.81)	neutral(0.001)	NULL
DCC	1630	genome.wustl.edu	37	18	50683764	50683764	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005215.3	+1	reviewed	p.D434N	1.000	310	0%	316	24.7%	0	-	possibly_damaging(0.827)	tolerated(0.11)	deleterious(0.586)	HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
DCC	1630	genome.wustl.edu	37	18	50977007	50977007	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005215.3	+1	reviewed	p.R1123*	1.000	171	0%	174	27%	0	-	-	-	-	HMMPfam_Neogenin_C
MBD2	8932	genome.wustl.edu	37	18	51692488	51692488	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003927.3	-1	reviewed	p.E297*	1.000	425	0%	409	34%	77	12.9%	-	-	-	NULL
POLI	11201	genome.wustl.edu	37	18	51820370	51820370	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007195.2	+1	validated	p.D586N	0.008	111	0%	121	35.5%	7	14.2%	benign(0.002)	tolerated(0.07)	neutral(0.319)	NULL
STARD6	147323	genome.wustl.edu	37	18	51851238	51851238	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_139171.1	-1	provisional	p.A163T	0.987	252	0%	301	28.9%	0	-	possibly_damaging(0.49)	tolerated(0.69)	neutral(0.165)	HMMPfam_START,HMMSmart_START,superfamily_SSF55961
CCDC68	80323	genome.wustl.edu	37	18	52585176	52585176	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143829.1	-1	validated	p.L281I	1.000	345	0%	476	26.3%	4	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
TCF4	6925	genome.wustl.edu	37	18	53017619	53017619	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001083962.1	-1	reviewed	p.R174*	1.000	239	0%	208	30.8%	3	33.3%	-	-	-	NULL
WDR7	23335	genome.wustl.edu	37	18	54363622	54363622	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015285.2	+1	reviewed	p.E503*	1.000	218	0%	354	31.9%	0	-	-	-	-	HMMSmart_SM00320,superfamily_Prolyl oligopeptidase N-terminal domain
ONECUT2	9480	genome.wustl.edu	37	18	55104096	55104096	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004852.2	+1	reviewed	p.S383F	1.000	32	0%	25	44%	1	100%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	HMMPfam_CUT
FECH	2235	genome.wustl.edu	37	18	55238743	55238743	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012515.2	-1	reviewed	p.R121Q	1.000	172	0%	327	40.1%	10	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ferrochelatase,superfamily_Chelatase
NARS	4677	genome.wustl.edu	37	18	55274646	55274646	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000411676	-1	known	p.K277N	0.000	60	0%	126	34.9%	0	-	possibly_damaging(0.952)	-	-	NULL
ATP8B1	5205	genome.wustl.edu	37	18	55319904	55319904	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005603.4	-1	reviewed	p.D1025Y	1.000	50	0%	120	35.8%	10	10%	possibly_damaging(0.948)	deleterious(0.01)	deleterious(0.796)	superfamily_SSF81665
ATP8B1	5205	genome.wustl.edu	37	18	55336595	55336595	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005603.4	-1	reviewed	p.D684	0.736	157	0%	185	42.7%	10	30%	-	-	-	superfamily_SSF56784,superfamily_SSF81660,superfamily_SSF81665
NEDD4L	23327	genome.wustl.edu	37	18	56033419	56033419	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144967.1	+1	validated	p.E674D	1.000	245	0%	288	29.9%	8	37.5%	probably_damaging(0.996)	tolerated(0.06)	deleterious(0.784)	HMMPfam_HECT,HMMSmart_SM00119,superfamily_Hect E3 ligase catalytic domain
ALPK2	115701	genome.wustl.edu	37	18	56202272	56202272	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052947.3	-1	validated	p.E1716A	0.928	226	0%	272	32.4%	1	0%	benign(0.057)	deleterious(0.04)	neutral(0.352)	NULL
ALPK2	115701	genome.wustl.edu	37	18	56204037	56204037	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052947.3	-1	validated	p.E1128*	0.145	144	0%	167	34.1%	0	-	-	-	-	NULL
ALPK2	115701	genome.wustl.edu	37	18	56204858	56204858	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052947.3	-1	validated	p.S854Y	0.004	123	0%	158	23.4%	0	-	possibly_damaging(0.92)	deleterious(0)	deleterious(0.816)	NULL
ALPK2	115701	genome.wustl.edu	37	18	56247069	56247069	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052947.3	-1	validated	p.E313D	1.000	173	0%	191	34%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
ALPK2	115701	genome.wustl.edu	37	18	56274592	56274592	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052947.3	-1	validated	p.F63L	1.000	122	0%	127	35.4%	0	-	benign(0.002)	tolerated(0.81)	neutral(0.001)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
MALT1	10892	genome.wustl.edu	37	18	56402496	56402496	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006785.2	+1	reviewed	p.K513T	1.000	51	0%	82	37.8%	9	44.4%	benign(0.032)	tolerated(0.13)	neutral(0.254)	HMMPfam_Peptidase_C14,superfamily_Caspase-like
ZNF532	55205	genome.wustl.edu	37	18	56620801	56620801	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018181.4	+1	validated	p.N974H	1.000	114	0%	210	27.6%	4	50%	benign(0.049)	tolerated(0.06)	neutral(0.326)	NULL
RAX	30062	genome.wustl.edu	37	18	56939764	56939764	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013435.2	-1	reviewed	p.A124	0.000	105	0%	188	31.9%	0	-	-	-	-	NULL
CPLX4	339302	genome.wustl.edu	37	18	56964043	56964043	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181654.3	-1	reviewed	p.L124I	0.995	286	0%	338	37.6%	0	-	possibly_damaging(0.794)	tolerated(0.16)	neutral(0.357)	NULL
CPLX4	339302	genome.wustl.edu	37	18	56979968	56979968	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181654.3	-1	reviewed	p.A68	0.528	212	0%	230	27.4%	0	-	-	-	-	NULL
LMAN1	3998	genome.wustl.edu	37	18	57013266	57013266	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005570.3	-1	reviewed	p.E280D	1.000	272	0%	274	37.6%	38	63.1%	benign(0.001)	tolerated(0.6)	neutral(0.004)	NULL
LMAN1	3998	genome.wustl.edu	37	18	57016437	57016437	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005570.3	-1	reviewed	p.K224T	1.000	205	0%	267	29.6%	43	48.8%	probably_damaging(0.997)	tolerated(0.19)	deleterious(0.516)	HMMPfam_Lectin_leg-like,superfamily_ConA_like_lec_gl
RNF152	220441	genome.wustl.edu	37	18	59483497	59483497	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173557.2	-1	validated	p.S67L	1.000	137	0%	164	28.7%	0	-	possibly_damaging(0.916)	deleterious(0.01)	deleterious(0.772)	superfamily_SSF57850
PIGN	23556	genome.wustl.edu	37	18	59763145	59763145	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012327.5	-1	reviewed	p.L706I	0.420	137	0%	143	34.3%	8	25%	benign(0.353)	deleterious(0.05)	neutral(0.457)	HMMPfam_PigN
TNFRSF11A	8792	genome.wustl.edu	37	18	60051984	60051984	+	Missense_Mutation	SNP	G	G	T	rs150973326	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003839.2	+1	reviewed	p.G523V	1.000	34	0%	64	34.4%	0	-	benign(0.093)	deleterious(0.02)	neutral(0.390)	NULL
ZCCHC2	54877	genome.wustl.edu	37	18	60241348	60241348	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017742.4	+1	validated	p.Y678	0.842	190	0%	279	30.1%	5	60%	-	-	-	NULL
PHLPP1	23239	genome.wustl.edu	37	18	60642763	60642763	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194449.2	+1	validated	p.R785*	1.000	138	0%	228	36%	4	25%	-	-	-	HMMSmart_SM00332,superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMPfam_PP2C
PHLPP1	23239	genome.wustl.edu	37	18	60646446	60646446	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194449.2	+1	validated	p.R1134*	0.998	36	0%	41	31.7%	12	66.6%	-	-	-	NULL
SERPINB5	5268	genome.wustl.edu	37	18	61156657	61156657	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002639.4	+1	validated	p.T128	0.097	179	0%	267	29.2%	4	25%	-	-	-	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
SERPINB5	5268	genome.wustl.edu	37	18	61170842	61170842	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002639.4	+1	validated	p.A339T	0.959	152	0%	157	38.2%	7	42.8%	benign(0)	tolerated(0.41)	neutral(0.015)	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
SERPINB4	6318	genome.wustl.edu	37	18	61306940	61306940	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000413673	-1	known	p.S182Y	0.992	297	0%	139	28.8%	0	-	-	-	-	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
SERPINB3	6317	genome.wustl.edu	37	18	61324563	61324563	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006919.2	-1	validated	p.Q185*	0.429	245	0%	137	32.1%	0	-	-	-	-	HMMPfam_Serpin,HMMSmart_SM00093,superfamily_Serpins
SERPINB7	8710	genome.wustl.edu	37	18	61449773	61449773	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040147.1	+1	validated	p.K56T	1.000	89	0%	121	33.9%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
SERPINB7	8710	genome.wustl.edu	37	18	61465947	61465947	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040147.1	+1	validated	p.S188	0.000	172	0%	193	23.8%	0	-	-	-	-	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
SERPINB2	5055	genome.wustl.edu	37	18	61562564	61562564	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143818.1	+1	validated	p.C79G	0.409	295	0%	293	31.4%	0	-	benign(0.001)	tolerated(0.08)	neutral(0.300)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
CDH7	1005	genome.wustl.edu	37	18	63477219	63477219	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004361.2	+1	reviewed	p.E164K	1.000	24	0%	27	37%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cadherin,superfamily_Cadherin-like
CDH19	28513	genome.wustl.edu	37	18	64172353	64172353	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021153.2	-1	reviewed	p.K672T	0.000	273	0%	132	28%	0	-	possibly_damaging(0.619)	deleterious(0.02)	deleterious(0.599)	HMMPfam_Cadherin_C
CDH19	28513	genome.wustl.edu	37	18	64197181	64197181	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021153.2	-1	reviewed	p.S453	0.010	120	0%	92	29.3%	0	-	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
CDH19	28513	genome.wustl.edu	37	18	64211982	64211982	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021153.2	-1	reviewed	p.Q312K	1.000	216	0%	258	32.6%	0	-	probably_damaging(0.988)	tolerated(0.1)	deleterious(0.724)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
DSEL	92126	genome.wustl.edu	37	18	65178924	65178924	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032160.2	-1	validated	p.M984I	0.998	43	0%	37	24.3%	0	-	benign(0)	tolerated(0.67)	neutral(0.003)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DSEL	92126	genome.wustl.edu	37	18	65180024	65180024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032160.2	-1	validated	p.D618Y	1.000	61	0%	40	30%	0	-	probably_damaging(1)	deleterious(0.05)	deleterious(0.845)	NULL
CCDC102B	79839	genome.wustl.edu	37	18	66504386	66504386	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001093729.1	+1	validated	p.M129T	0.561	113	0%	166	22.9%	0	-	benign(0.315)	tolerated(0.68)	neutral(0.101)	NULL
CCDC102B	79839	genome.wustl.edu	37	18	66504496	66504496	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001093729.1	+1	validated	p.E166*	0.000	83	0%	136	34.6%	0	-	-	-	-	NULL
CCDC102B	79839	genome.wustl.edu	37	18	66721304	66721304	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001093729.1	+1	validated	p.R491M	0.944	121	0%	82	32.9%	3	0%	possibly_damaging(0.926)	deleterious(0)	deleterious(0.819)	NULL
CD226	10666	genome.wustl.edu	37	18	67563239	67563239	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006566.2	-1	reviewed	p.S142L	0.175	76	0%	145	31.7%	2	50%	possibly_damaging(0.643)	deleterious(0.04)	deleterious(0.575)	HMMPfam_V-set,superfamily_SSF48726
RTTN	25914	genome.wustl.edu	37	18	67671452	67671452	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173630.3	-1	validated	p.N2206H	0.700	385	0%	421	32.1%	22	31.8%	possibly_damaging(0.476)	tolerated(0.2)	neutral(0.206)	NULL
RTTN	25914	genome.wustl.edu	37	18	67727135	67727135	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173630.3	-1	validated	p.D1631Y	0.602	229	0%	390	32.6%	4	50%	possibly_damaging(0.712)	tolerated(0.41)	neutral(0.273)	NULL
RTTN	25914	genome.wustl.edu	37	18	67802496	67802496	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173630.3	-1	validated	p.D937Y	0.988	123	0%	77	27.3%	1	0%	probably_damaging(0.956)	deleterious(0.01)	deleterious(0.805)	NULL
FBXO15	201456	genome.wustl.edu	37	18	71793239	71793239	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142958.1	-1	reviewed	p.H295Y	0.000	130	0%	174	33.9%	1	0%	benign(0.29)	tolerated(0.08)	neutral(0.389)	NULL
FBXO15	201456	genome.wustl.edu	37	18	71793310	71793310	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142958.1	-1	reviewed	p.K271M	0.949	134	0%	144	31.9%	0	-	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	NULL
FAM69C	125704	genome.wustl.edu	37	18	72109276	72109276	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001044369.2	-1	validated	p.D318Y	0.993	139	0%	208	21.6%	5	0%	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	NULL
CNDP1	84735	genome.wustl.edu	37	18	72244107	72244107	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032649.5	+1	reviewed	p.S282N	1.000	374	0%	592	30.4%	0	-	benign(0.249)	tolerated(0.17)	neutral(0.084)	HMMPfam_Peptidase_M20,HMMPfam_M20_dimer,superfamily_Bacterial exopeptidase dimerisation domain,superfamily_Zn-dependent exopeptidases
CNDP1	84735	genome.wustl.edu	37	18	72247400	72247400	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032649.5	+1	reviewed	p.R401I	0.960	185	0%	245	33.9%	0	-	probably_damaging(0.972)	tolerated(0.07)	deleterious(0.733)	HMMPfam_Peptidase_M20,HMMPfam_M20_dimer,superfamily_Zn-dependent exopeptidases
ZNF407	55628	genome.wustl.edu	37	18	72346223	72346223	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017757.2	+1	reviewed	p.V1083A	0.001	56	0%	88	31.8%	4	25%	benign(0.054)	deleterious(0)	neutral(0.448)	NULL
ZNF516	9658	genome.wustl.edu	37	18	74092048	74092048	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000443185	-1	known	p.K674N	0.502	129	0%	209	33%	12	8.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
MBP	4155	genome.wustl.edu	37	18	74696792	74696792	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025101.1	-1	reviewed	p.S270L	0.998	126	0%	149	30.2%	1	0%	possibly_damaging(0.794)	tolerated(0.17)	neutral(0.357)	HMMPfam_Myelin_MBP
SALL3	27164	genome.wustl.edu	37	18	76757088	76757088	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_171999.2	+1	validated	p.L1223	0.274	72	0%	76	22.4%	0	-	-	-	-	NULL
ADNP2	22850	genome.wustl.edu	37	18	77893890	77893890	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014913.3	+1	validated	p.P198	0.000	128	0%	222	38.7%	11	54.5%	-	-	-	NULL
ADNP2	22850	genome.wustl.edu	37	18	77895733	77895733	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014913.3	+1	validated	p.D813N	0.988	89	0%	149	32.2%	14	50%	probably_damaging(0.992)	deleterious(0.02)	deleterious(0.831)	NULL
SHC2	25759	genome.wustl.edu	37	19	436216	436216	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012435.2	-1	validated	p.R301H	1.000	33	0%	48	33.3%	16	6.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PID,HMMSmart_PTB,superfamily_SSF50729
ODF3L2	284451	genome.wustl.edu	37	19	467752	467752	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182577.2	-1	validated	p.Q82H	0.403	83	0%	187	24.1%	0	-	probably_damaging(0.961)	tolerated(0.11)	deleterious(0.675)	NULL
MADCAM1	8174	genome.wustl.edu	37	19	498581	498581	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130760.2	+1	reviewed	p.P141	0.000	24	0%	42	45.2%	1	0%	-	-	-	HMMPfam_Adhes-Ig_like,superfamily_Immunoglobulin
GZMM	3004	genome.wustl.edu	37	19	547338	547338	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005317.2	+1	reviewed	p.P38	0.001	15	0%	27	37%	1	0%	-	-	-	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
WDR18	57418	genome.wustl.edu	37	19	991240	991240	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024100.3	+1	reviewed	p.C274R	1.000	29	0%	39	35.9%	132	41.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
ABCA7	10347	genome.wustl.edu	37	19	1041399	1041399	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019112.3	+1	reviewed	p.K13N	1.000	98	0%	175	30.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ABCA7	10347	genome.wustl.edu	37	19	1048932	1048932	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019112.3	+1	reviewed	p.R770W	0.985	45	0%	67	26.9%	0	-	probably_damaging(0.994)	deleterious(0.03)	deleterious(0.817)	NULL
ABCA7	10347	genome.wustl.edu	37	19	1051163	1051163	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019112.3	+1	reviewed	p.V898	1.000	64	0%	94	40.4%	1	0%	-	-	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
ABCA7	10347	genome.wustl.edu	37	19	1063824	1063824	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019112.3	+1	reviewed	p.V1971	0.998	51	0%	46	37%	3	66.6%	-	-	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
HMHA1	23526	genome.wustl.edu	37	19	1080497	1080497	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012292.2	+1	validated	p.P621	0.002	23	0%	35	37.1%	10	0%	-	-	-	NULL
C19orf26	255057	genome.wustl.edu	37	19	1235858	1235858	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152769.2	-1	validated	p.F49	0.016	82	0%	137	38%	2	50%	-	-	-	NULL
ATP5D	513	genome.wustl.edu	37	19	1244149	1244149	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001975.1	+1	reviewed	p.E117K	0.997	36	0%	70	40%	453	28.6%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_ATP-synt_DE_N,superfamily_ATPsynt_DE
CIRBP-AS1	148046	genome.wustl.edu	37	19	1268376	1268376	+	Nonstop_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000436371	-1	known	p.*110W	0.000	72	0%	94	28.7%	1	100%	-	-	-	NULL
DAZAP1	26528	genome.wustl.edu	37	19	1421251	1421251	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018959.2	+1	reviewed	p.F136	0.424	102	0%	214	32.2%	87	33.3%	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
KLF16	83855	genome.wustl.edu	37	19	1854677	1854677	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031918.3	-1	validated	p.T180	0.608	38	0%	38	36.8%	18	55.5%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
MOB3A	126308	genome.wustl.edu	37	19	2076855	2076855	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130807.2	-1	validated	p.F193	0.988	29	0%	75	29.3%	16	25%	-	-	-	HMMPfam_Mob1_phocein,superfamily_Mob1_phocein
IZUMO4	113177	genome.wustl.edu	37	19	2098125	2098125	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039846.1	+1	validated	p.E158K	1.000	57	0%	90	38.9%	3	33.3%	benign(0)	tolerated(0.42)	neutral(0.014)	NULL
IZUMO4	113177	genome.wustl.edu	37	19	2098294	2098294	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039846.1	+1	validated	p.A161V	0.001	96	0%	131	35.1%	4	25%	benign(0)	tolerated(0.07)	neutral(0.319)	NULL
ENSG00000005206	0	genome.wustl.edu	37	19	2351500	2351500	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000452401	+1	known	p.L474I	1.000	44	0%	67	41.8%	91	38.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00730,HMMPfam_Peptidase_A22B
TMPRSS9	360200	genome.wustl.edu	37	19	2416621	2416621	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182973.1	+1	provisional	p.R577W	0.000	22	0%	53	34%	2	50%	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
DIRAS1	148252	genome.wustl.edu	37	19	2717728	2717728	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145173.3	-1	validated	p.R26H	1.000	33	0%	47	38.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_RAS,HMMPfam_Ras,superfamily_SSF52540
THOP1	7064	genome.wustl.edu	37	19	2794856	2794856	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003249.3	+1	provisional	p.F108	0.329	123	0%	216	40.3%	55	54.5%	-	-	-	superfamily_SSF55486
ZNF554	115196	genome.wustl.edu	37	19	2834799	2834799	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102651.1	+1	validated	p.I522	0.000	43	0%	64	25%	15	33.3%	-	-	-	NULL
ZNF555	148254	genome.wustl.edu	37	19	2852877	2852877	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152791.4	+1	validated	p.R272*	0.008	100	0%	162	37.7%	7	71.4%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF57	126295	genome.wustl.edu	37	19	2916921	2916921	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173480.2	+1	validated	e4-1	0.001	50	0%	79	39.2%	1	100%	-	-	-	-
ZNF57	126295	genome.wustl.edu	37	19	2917020	2917020	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173480.2	+1	validated	p.S134Y	0.000	93	0%	156	35.9%	6	16.6%	benign(0.221)	tolerated(0.09)	neutral(0.319)	superfamily_C2H2 and C2HC zinc fingers
GNA11	2767	genome.wustl.edu	37	19	3121094	3121094	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002067.2	+1	validated	p.D333N	1.000	41	0%	79	30.4%	26	34.6%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_G-alpha,superfamily_SSF52540
NFIC	4782	genome.wustl.edu	37	19	3456581	3456581	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_205843.1	+1	validated	p.R477H	1.000	97	0%	148	31.1%	2	0%	unknown(0)	deleterious(0)	-	HMMPfam_CTF_NFI
GIPC3	126326	genome.wustl.edu	37	19	3589487	3589487	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133261.2	+1	validated	p.A213	0.070	64	0%	99	40.4%	0	-	-	-	-	NULL
APBA3	9546	genome.wustl.edu	37	19	3760231	3760231	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004886.3	-1	reviewed	p.S11L	0.001	21	0%	40	42.5%	14	35.7%	benign(0)	deleterious(0)	neutral(0.445)	NULL
ZFR2	23217	genome.wustl.edu	37	19	3852363	3852363	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_027149.1	-1	validated	NULL	0.005	22	0%	33	42.4%	13	76.9%	-	-	-	-
DAPK3	1613	genome.wustl.edu	37	19	3964803	3964803	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001348.1	-1	reviewed	p.F83	0.966	90	0%	179	35.8%	106	42.4%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
EEF2	1938	genome.wustl.edu	37	19	3979938	3979938	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001961.3	-1	reviewed	p.A491	0.899	33	0%	54	42.6%	2694	42.8%	-	-	-	superfamily_Translation proteins
ANKRD24	170961	genome.wustl.edu	37	19	4216979	4216979	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133475.1	+1	provisional	p.E608*	0.056	48	0%	180	32.8%	1	0%	-	-	-	NULL
CHAF1A	10036	genome.wustl.edu	37	19	4418031	4418031	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005483.2	+1	validated	p.F325	0.027	139	0%	265	28.7%	9	66.6%	-	-	-	NULL
CHAF1A	10036	genome.wustl.edu	37	19	4428801	4428801	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005483.2	+1	validated	p.F506L	0.024	45	0%	49	38.8%	19	42.1%	benign(0.002)	tolerated(0.83)	neutral(0.001)	NULL
HDGFRP2	84717	genome.wustl.edu	37	19	4497986	4497986	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001520.1	+1	reviewed	p.S454A	0.999	28	0%	73	47.9%	143	40.5%	possibly_damaging(0.495)	tolerated(0.68)	neutral(0.167)	NULL
MIR7-3HG	284424	genome.wustl.edu	37	19	4772175	4772175	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_027148.1	+1	validated	NULL	0.001	129	0%	358	28.2%	0	-	-	-	-	-
UHRF1	29128	genome.wustl.edu	37	19	4932925	4932925	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000398240	+1	known	p.E261K	0.993	22	0%	37	48.6%	27	44.4%	benign(0.011)	tolerated(0.52)	neutral(0.009)	NULL
UHRF1	29128	genome.wustl.edu	37	19	4941638	4941638	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000398240	+1	known	p.R308I	0.064	78	0%	145	36.6%	27	40.7%	benign(0.408)	deleterious(0.05)	deleterious(0.477)	NULL
KDM4B	23030	genome.wustl.edu	37	19	5039915	5039915	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015015.2	+1	validated	p.A70	0.551	22	0%	24	25%	24	37.5%	-	-	-	NULL
SAFB2	9667	genome.wustl.edu	37	19	5616217	5616217	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014649.2	-1	validated	p.D157N	0.001	64	0%	142	31.7%	30	30%	possibly_damaging(0.61)	tolerated(0.11)	deleterious(0.483)	NULL
SAFB	6294	genome.wustl.edu	37	19	5654197	5654197	+	Missense_Mutation	SNP	G	G	A	rs188904085	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002967.2	+1	reviewed	p.R551Q	0.434	101	0%	289	33.9%	121	45.4%	probably_damaging(0.963)	tolerated(0.42)	neutral(0.420)	superfamily_SSF54928
CATSPERD	257062	genome.wustl.edu	37	19	5772829	5772829	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152784.3	+1	validated	p.I598	0.000	48	0%	96	32.3%	0	-	-	-	-	NULL
FUT6	2528	genome.wustl.edu	37	19	5831666	5831666	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000150.2	-1	reviewed	p.L305M	0.989	114	0%	171	26.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Glyco_transf_10
FUT3	2525	genome.wustl.edu	37	19	5844061	5844061	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000149.3	-1	reviewed	p.A264T	0.999	130	0.8%	212	18.9%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	HMMPfam_Glyco_transf_10
ACSBG2	81616	genome.wustl.edu	37	19	6183185	6183185	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030924.3	+1	validated	p.F408L	1.000	80	0%	125	38.4%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_AMP-binding,superfamily_SSF56801
ACER1	125981	genome.wustl.edu	37	19	6312401	6312401	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133492.2	-1	validated	p.I68S	0.870	63	0%	200	37%	0	-	benign(0.072)	deleterious(0.01)	neutral(0.411)	HMMPfam_aPHC
KHSRP	8570	genome.wustl.edu	37	19	6416504	6416504	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003685.2	-1	validated	p.I495	0.388	34	0%	99	38.4%	113	43.3%	-	-	-	HMMSmart_SM00322,superfamily_Eukaryotic type KH-domain (KH-domain type I)
KHSRP	8570	genome.wustl.edu	37	19	6422426	6422426	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003685.2	-1	validated	p.D91N	1.000	129	0%	259	29%	38	57.8%	probably_damaging(0.957)	tolerated(0.08)	deleterious(0.701)	NULL
SLC25A23	79085	genome.wustl.edu	37	19	6454714	6454714	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024103.2	-1	validated	p.G166	0.005	37	0%	48	37.5%	21	38%	-	-	-	NULL
C3	718	genome.wustl.edu	37	19	6697717	6697717	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000064.2	-1	reviewed	p.E843	1.000	62	0%	57	43.9%	4	0%	-	-	-	HMMPfam_A2M
C3	718	genome.wustl.edu	37	19	6719390	6719390	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000064.2	-1	reviewed	p.I33	0.081	49	0%	118	38.1%	0	-	-	-	-	HMMPfam_A2M_N
TRIP10	9322	genome.wustl.edu	37	19	6750327	6750327	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004240.2	+1	validated	p.R418*	0.995	43	0%	45	42.2%	70	22.8%	-	-	-	NULL
VAV1	7409	genome.wustl.edu	37	19	6772919	6772919	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005428.2	+1	reviewed	p.A34V	1.000	60	0%	97	33%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CH,HMMSmart_CH,superfamily_Calponin-homology
VAV1	7409	genome.wustl.edu	37	19	6825391	6825391	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005428.2	+1	reviewed	p.Y267	1.000	54	0%	94	23.4%	3	0%	-	-	-	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain
VAV1	7409	genome.wustl.edu	37	19	6854018	6854018	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005428.2	+1	reviewed	p.R798Q	0.987	83	0%	126	34.1%	8	0%	probably_damaging(0.988)	tolerated(0.2)	deleterious(0.486)	HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SH3,superfamily_SSF55550
EMR1	2015	genome.wustl.edu	37	19	6903919	6903919	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001974.3	+1	reviewed	p.N254D	0.236	149	0%	331	36%	0	-	possibly_damaging(0.856)	tolerated(0.43)	neutral(0.344)	HMMSmart_SM00179,HMMSmart_SM00181,superfamily_Family A G protein-coupled receptor-like
EMR1	2015	genome.wustl.edu	37	19	6916286	6916286	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001974.3	+1	reviewed	p.E443*	0.033	121	0%	243	35%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
EMR1	2015	genome.wustl.edu	37	19	6921764	6921764	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001974.3	+1	reviewed	p.S554N	0.001	137	0%	257	32.7%	0	-	benign(0.001)	tolerated(0.33)	neutral(0.024)	HMMPfam_GPS,HMMSmart_SM00303,superfamily_Family A G protein-coupled receptor-like
EMR1	2015	genome.wustl.edu	37	19	6935064	6935064	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001974.3	+1	reviewed	p.E786K	0.910	137	0%	259	28.2%	1	0%	probably_damaging(0.972)	deleterious(0.01)	deleterious(0.820)	HMMPfam_7tm_2,superfamily_Family A G protein-coupled receptor-like
EMR4P	326342	genome.wustl.edu	37	19	6984860	6984860	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000359590	-1	known	e4-1	0.866	156	0%	273	35.2%	0	-	-	-	-	-
EMR4P	326342	genome.wustl.edu	37	19	6988808	6988808	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000359590	-1	known	p.K25N	0.004	147	0%	226	26.5%	0	-	-	-	-	NULL
ZNF557	79230	genome.wustl.edu	37	19	7083587	7083587	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001044387.1	+1	validated	p.S375	0.119	94	0%	176	34.1%	1	100%	-	-	-	superfamily_SSF57667
INSR	3643	genome.wustl.edu	37	19	7174672	7174672	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000208.2	-1	reviewed	p.D349N	1.000	69	0%	71	26.8%	5	0%	benign(0.088)	tolerated(0.06)	neutral(0.329)	superfamily_L domain-like
C19orf45	374877	genome.wustl.edu	37	19	7569252	7569252	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198534.2	+1	validated	p.S246L	0.014	34	0%	68	41.2%	0	-	possibly_damaging(0.646)	deleterious(0.01)	deleterious(0.632)	NULL
MCOLN1	57192	genome.wustl.edu	37	19	7591779	7591779	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020533.2	+1	reviewed	p.D180N	1.000	69	0%	120	36.7%	70	42.8%	probably_damaging(0.993)	tolerated(0.34)	deleterious(0.473)	NULL
PNPLA6	10908	genome.wustl.edu	37	19	7605050	7605050	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006702.4	+1	reviewed	p.F151	0.997	33	0%	37	45.9%	14	21.4%	-	-	-	HMMSmart_cNMP,superfamily_cNMP_binding
PNPLA6	10908	genome.wustl.edu	37	19	7626392	7626392	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006702.4	+1	reviewed	p.L1310I	0.157	20	0%	33	33.3%	124	34.6%	benign(0.156)	tolerated(0.12)	neutral(0.275)	NULL
XAB2	56949	genome.wustl.edu	37	19	7693147	7693147	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020196.2	-1	validated	p.R30L	1.000	79	0%	111	24.3%	28	42.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
STXBP2	6813	genome.wustl.edu	37	19	7712249	7712249	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006949.2	+1	reviewed	p.F516	0.978	21	0%	30	16.7%	140	35%	-	-	-	HMMPfam_Sec1,superfamily_Sec1/munc18-like (SM) proteins
FCER2	2208	genome.wustl.edu	37	19	7763739	7763739	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002002.4	-1	validated	p.E8D	0.000	28	0%	31	25.8%	0	-	possibly_damaging(0.565)	tolerated(0.61)	neutral(0.197)	NULL
CD209	30835	genome.wustl.edu	37	19	7805365	7805365	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026692.1	-1	reviewed	NULL	0.000	42	0%	86	40.7%	0	-	-	-	-	-
CD209	30835	genome.wustl.edu	37	19	7807826	7807826	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_026692.1	-1	reviewed	NULL	0.000	21	0%	37	27%	0	-	-	-	-	-
CLEC4M	10332	genome.wustl.edu	37	19	7830514	7830514	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144907.1	+1	reviewed	p.L48I	0.000	214	0%	380	36.3%	0	-	possibly_damaging(0.495)	tolerated(0.06)	deleterious(0.488)	NULL
LRRC8E	80131	genome.wustl.edu	37	19	7964768	7964768	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025061.3	+1	validated	p.P454L	0.816	10	0%	16	37.5%	2	50%	probably_damaging(0.994)	-	-	superfamily_SSF52058
TIMM44	10469	genome.wustl.edu	37	19	8002998	8002998	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006351.3	-1	validated	p.E76*	1.000	294	0.3%	520	31.3%	22	4.5%	-	-	-	NULL
ELAVL1	1994	genome.wustl.edu	37	19	8056543	8056543	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001419.2	-1	reviewed	p.R53W	1.000	139	0%	227	29.5%	77	44.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
CCL25	6370	genome.wustl.edu	37	19	8121383	8121383	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005624.2	+1	reviewed	p.A109S	0.819	44	0%	89	38.2%	0	-	probably_damaging(0.998)	tolerated(0.08)	deleterious(0.774)	superfamily_Interleukin 8-like chemokines
FBN3	84467	genome.wustl.edu	37	19	8136977	8136977	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032447.3	-1	reviewed	p.L2681	0.926	50	0%	85	30.6%	0	-	-	-	-	NULL
FBN3	84467	genome.wustl.edu	37	19	8152028	8152028	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032447.3	-1	reviewed	p.I2229	0.939	31	0%	51	45.1%	0	-	-	-	-	PatternScan_ASX_HYDROXYL,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF_CA,PatternScan_EGF_CA,superfamily_EGF/Laminin
FBN3	84467	genome.wustl.edu	37	19	8173069	8173069	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032447.3	-1	reviewed	p.T1558A	1.000	61	0%	120	38.3%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
FBN3	84467	genome.wustl.edu	37	19	8174244	8174244	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032447.3	-1	reviewed	p.E1495D	0.256	42	0%	101	29.7%	0	-	benign(0)	tolerated(1)	-	superfamily_TB module/8-cys domain
FBN3	84467	genome.wustl.edu	37	19	8196575	8196575	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032447.3	-1	reviewed	p.S618N	1.000	24	0%	30	40%	0	-	possibly_damaging(0.522)	tolerated(0.17)	neutral(0.235)	superfamily_TB module/8-cys domain
MYO1F	4542	genome.wustl.edu	37	19	8595108	8595108	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012335.3	-1	validated	p.S767L	1.000	36	0%	44	45.5%	8	0%	benign(0.124)	tolerated(0.33)	neutral(0.034)	HMMPfam_Myosin_TH1
MYO1F	4542	genome.wustl.edu	37	19	8615486	8615486	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012335.3	-1	validated	p.F288	0.997	98	0%	267	33%	5	0%	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO1F	4542	genome.wustl.edu	37	19	8618065	8618065	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012335.3	-1	validated	p.F154	0.932	128	0%	286	32.9%	4	0%	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
ADAMTS10	81794	genome.wustl.edu	37	19	8661265	8661265	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030957.2	-1	reviewed	p.R372	0.085	49	0%	89	36%	2	0%	-	-	-	HMMPfam_Reprolysin,superfamily_SSF55486
OR2Z1	284383	genome.wustl.edu	37	19	8841978	8841978	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004699.1	+1	provisional	p.E196D	0.007	141	0%	289	29.1%	0	-	benign(0.006)	deleterious(0.02)	neutral(0.383)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
ZNF558	148156	genome.wustl.edu	37	19	8922147	8922147	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144693.1	-1	provisional	p.R340I	1.000	165	0%	199	37.2%	4	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF558	148156	genome.wustl.edu	37	19	8922310	8922310	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144693.1	-1	provisional	p.H286N	1.000	178	0%	231	33.8%	4	50%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
MUC16	94025	genome.wustl.edu	37	19	9000474	9000474	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024690.2	-1	validated	p.F13504V	0.014	373	0%	532	36.5%	3	33.3%	probably_damaging(0.999)	tolerated(0.07)	deleterious(0.809)	HMMPfam_SEA,HMMSmart_SM00200,superfamily_SEA domain
MUC16	94025	genome.wustl.edu	37	19	9047341	9047341	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024690.2	-1	validated	p.E11430D	0.000	351	0%	511	32.3%	0	-	benign(0.29)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9057356	9057356	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024690.2	-1	validated	p.T10030	0.000	107	0%	165	28.5%	1	0%	-	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9059404	9059404	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024690.2	-1	validated	p.E9348*	0.000	351	0%	386	31.9%	0	-	-	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9068797	9068797	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024690.2	-1	validated	p.E6217*	0.002	133	0%	219	32.9%	0	-	-	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9072076	9072076	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024690.2	-1	validated	p.E5124K	0.000	339	0%	484	31%	1	0%	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9072110	9072110	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024690.2	-1	validated	p.K5112N	0.000	303	0%	406	34.7%	1	0%	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9077335	9077335	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024690.2	-1	validated	p.D3371Y	0.049	214	0%	358	32.1%	1	0%	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9077597	9077597	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024690.2	-1	validated	p.V3283	0.008	104	0%	125	36%	0	-	-	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9086245	9086245	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024690.2	-1	validated	p.G1857E	0.015	114	0%	175	29.1%	0	-	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9087897	9087897	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024690.2	-1	validated	p.E1306D	0.006	265	0%	485	32.4%	0	-	unknown(0)	-	-	NULL
MUC16	94025	genome.wustl.edu	37	19	9091145	9091145	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024690.2	-1	validated	p.G224R	0.042	195	0%	353	36.5%	0	-	unknown(0)	-	-	NULL
OR7G1	125962	genome.wustl.edu	37	19	9226367	9226367	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005192.1	-1	provisional	p.L25V	0.001	147	0%	317	35.6%	0	-	benign(0.007)	tolerated(0.07)	neutral(0.319)	superfamily_Family A G protein-coupled receptor-like
OR7D2	162998	genome.wustl.edu	37	19	9296956	9296956	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175883.1	+1	provisional	p.I167L	0.004	182	0%	405	31.6%	0	-	benign(0)	deleterious(0.05)	neutral(0.345)	HMMPfam_7tm_1,superfamily_SSF81321
ENSG00000188314	0	genome.wustl.edu	37	19	9346187	9346187	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000344049	+1	known	p.F18C	1.000	99	0%	110	30%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321
ZNF177	7730	genome.wustl.edu	37	19	9492338	9492338	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003451.2	+1	validated	p.R284K	1.000	124	0%	180	33.3%	11	63.6%	probably_damaging(0.998)	tolerated(0.07)	deleterious(0.793)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF266	10781	genome.wustl.edu	37	19	9524026	9524026	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006631.2	-1	validated	p.C525	1.000	99	1%	146	30.1%	23	26%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF426	79088	genome.wustl.edu	37	19	9639369	9639369	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024106.1	-1	provisional	p.K451T	0.957	139	0%	265	33.2%	6	33.3%	possibly_damaging(0.754)	tolerated(0.13)	deleterious(0.530)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF426	79088	genome.wustl.edu	37	19	9639570	9639570	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024106.1	-1	provisional	p.R384I	0.040	110	0%	176	33%	7	85.7%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF562	54811	genome.wustl.edu	37	19	9764426	9764426	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130031.1	-1	validated	p.K160N	0.201	177	0%	306	35%	3	0%	benign(0.001)	deleterious(0.01)	neutral(0.406)	NULL
ZNF812	729648	genome.wustl.edu	37	19	9801766	9801766	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001726949.2	-1	model	p.K65T	0.000	151	0%	221	29.4%	1	0%	possibly_damaging(0.448)	tolerated(0.12)	neutral(0.407)	NULL
ZNF812	729648	genome.wustl.edu	37	19	9804395	9804395	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000457674	-1	known	p.E72D	0.706	114	0%	168	29.2%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
OLFM2	93145	genome.wustl.edu	37	19	9968532	9968532	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_058164.2	-1	provisional	p.Q73H	1.000	29	0%	58	32.8%	25	32%	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	NULL
COL5A3	50509	genome.wustl.edu	37	19	10080079	10080079	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015719.3	-1	reviewed	e57-1	1.000	44	0%	66	30.3%	0	-	-	-	-	-
COL5A3	50509	genome.wustl.edu	37	19	10089903	10089903	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015719.3	-1	reviewed	p.E927*	0.998	113	0%	162	35.2%	2	0%	-	-	-	HMMPfam_Collagen
COL5A3	50509	genome.wustl.edu	37	19	10114749	10114749	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015719.3	-1	reviewed	p.D223N	0.549	53	0%	60	28.3%	0	-	unknown(0)	deleterious(0.02)	-	superfamily_Concanavalin A-like lectins/glucanases
COL5A3	50509	genome.wustl.edu	37	19	10116479	10116479	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015719.3	-1	reviewed	p.D144Y	1.000	46	0%	87	26.4%	2	0%	unknown(0)	deleterious(0)	-	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2
RAVER1	125950	genome.wustl.edu	37	19	10433938	10433938	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133452.2	-1	validated	p.G338W	1.000	31	0%	56	28.6%	19	52.6%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
KEAP1	9817	genome.wustl.edu	37	19	10600391	10600391	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012289.3	-1	reviewed	p.E488D	1.000	60	0%	124	29.8%	64	25%	probably_damaging(0.961)	deleterious(0)	deleterious(0.849)	HMMPfam_Kelch_1,HMMSmart_Kelch,superfamily_Gal_oxid_central
SLC44A2	57153	genome.wustl.edu	37	19	10747256	10747256	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020428.3	+1	validated	p.A497	0.160	44	0%	86	25.6%	121	39.6%	-	-	-	HMMPfam_DUF580
C19orf38	255809	genome.wustl.edu	37	19	10980037	10980037	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136482.1	+1	provisional	p.C229	0.001	37	0%	50	36%	3	66.6%	-	-	-	NULL
SMARCA4	6597	genome.wustl.edu	37	19	11152127	11152127	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128849.1	+1	reviewed	p.K1471Q	1.000	44	0%	53	35.8%	134	42.5%	benign(0.119)	tolerated(0.54)	neutral(0.017)	superfamily_Bromodomain
LDLR	3949	genome.wustl.edu	37	19	11230776	11230776	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000527.3	+1	reviewed	p.V618	0.605	48	0%	150	27.3%	31	32.2%	-	-	-	HMMPfam_Ldl_recept_b,HMMSmart_SM00135,superfamily_YWTD domain
RGL3	57139	genome.wustl.edu	37	19	11505121	11505121	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001035223.2	-1	validated	p.R697Q	0.472	96	0%	159	35.2%	24	45.8%	unknown(0)	deleterious(0.01)	-	HMMPfam_RA,HMMSmart_SM00314,superfamily_Ubiquitin-like
RGL3	57139	genome.wustl.edu	37	19	11507979	11507979	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001035223.2	-1	validated	p.N652S	0.998	34	0%	78	38.5%	7	71.4%	probably_damaging(0.971)	tolerated(0.06)	deleterious(0.736)	HMMPfam_RA,HMMSmart_SM00314,superfamily_Ubiquitin-like
CCDC151	115948	genome.wustl.edu	37	19	11545611	11545611	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145045.4	-1	validated	p.K76T	0.997	43	0%	137	27.7%	1	100%	benign(0.147)	tolerated(0.08)	neutral(0.313)	NULL
ZNF823	55552	genome.wustl.edu	37	19	11832638	11832638	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080493.2	-1	validated	p.R571*	0.000	159	0%	249	34.5%	13	15.3%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF823	55552	genome.wustl.edu	37	19	11832709	11832709	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080493.2	-1	validated	p.R547I	1.000	140	0%	225	36%	15	66.6%	benign(0.055)	tolerated(0.06)	neutral(0.326)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF441	126068	genome.wustl.edu	37	19	11892195	11892195	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152355.2	+1	validated	p.R519Q	0.000	128	0%	229	28.8%	0	-	benign(0.124)	tolerated(0.69)	neutral(0.012)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF441	126068	genome.wustl.edu	37	19	11892363	11892363	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152355.2	+1	validated	p.R575Q	0.000	103	1%	148	33.1%	0	-	possibly_damaging(0.861)	tolerated(0.72)	neutral(0.335)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF491	126069	genome.wustl.edu	37	19	11917040	11917040	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152356.3	+1	validated	p.R91Q	0.000	72	0%	120	35%	0	-	benign(0.299)	tolerated(0.89)	neutral(0.092)	superfamily_SSF57667
ZNF439	90594	genome.wustl.edu	37	19	11979077	11979077	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152262.2	+1	provisional	p.R398Q	0.000	112	0%	140	32.1%	4	75%	possibly_damaging(0.566)	tolerated(0.79)	neutral(0.195)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF69	7620	genome.wustl.edu	37	19	12015958	12015958	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000429654	+1	known	p.E249A	0.224	107	0%	141	34.8%	0	-	probably_damaging(0.972)	tolerated(0.11)	deleterious(0.685)	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF69	7620	genome.wustl.edu	37	19	12016170	12016170	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000429654	+1	known	p.R320C	0.028	177	0.6%	241	25.7%	1	100%	benign(0.173)	deleterious(0)	neutral(0.461)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF700	90592	genome.wustl.edu	37	19	12059106	12059106	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144566.1	+1	provisional	p.E89D	0.117	175	0%	291	28.9%	3	0%	possibly_damaging(0.909)	tolerated(0.08)	deleterious(0.662)	NULL
ZNF763	284390	genome.wustl.edu	37	19	12089496	12089496	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012753.1	+1	validated	p.E256K	0.894	104	0%	165	30.3%	1	0%	possibly_damaging(0.941)	deleterious(0)	deleterious(0.831)	superfamily_SSF57667
ZNF433	163059	genome.wustl.edu	37	19	12126956	12126956	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080411.1	-1	provisional	p.R242	0.000	186	0%	318	29.2%	4	75%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF878	729747	genome.wustl.edu	37	19	12154808	12154808	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080404.1	-1	inferred	p.K517E	0.992	101	0%	197	29.4%	0	-	benign(0.002)	tolerated(0.87)	neutral(0.001)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF878	729747	genome.wustl.edu	37	19	12155560	12155560	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080404.1	-1	inferred	p.R266I	0.002	181	0%	411	35.3%	0	-	probably_damaging(0.993)	tolerated(0.15)	deleterious(0.691)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF878	729747	genome.wustl.edu	37	19	12155876	12155876	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080404.1	-1	inferred	p.L161I	0.000	184	0%	329	33.7%	4	50%	benign(0.332)	tolerated(0.41)	neutral(0.119)	NULL
ZNF844	284391	genome.wustl.edu	37	19	12186153	12186153	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136501.1	+1	provisional	p.E73A	0.014	85	0%	142	31%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
ZNF844	284391	genome.wustl.edu	37	19	12186452	12186452	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136501.1	+1	provisional	p.E173*	0.000	86	0%	170	22.4%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ENSG00000188474	0	genome.wustl.edu	37	19	12223009	12223009	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000339302	+1	known	p.R216M	0.942	17	0%	34	47.1%	0	-	possibly_damaging(0.752)	deleterious(0.01)	deleterious(0.681)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF20	7568	genome.wustl.edu	37	19	12243521	12243521	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021143.2	-1	validated	p.R494*	0.000	144	0%	299	62.2%	26	92.3%	-	-	-	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF20	7568	genome.wustl.edu	37	19	12244494	12244494	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021143.2	-1	validated	p.K169	0.335	178	0%	400	30.2%	7	100%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF625	90589	genome.wustl.edu	37	19	12256528	12256528	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145233.2	-1	provisional	p.R169*	0.003	182	0%	354	26.8%	5	40%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF136	7695	genome.wustl.edu	37	19	12297659	12297659	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003437.2	+1	validated	p.R156*	0.746	113	0%	244	23%	7	71.4%	-	-	-	HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF563	147837	genome.wustl.edu	37	19	12429697	12429697	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145276.2	-1	validated	p.R381Q	0.000	224	0%	488	36.5%	8	37.5%	probably_damaging(1)	tolerated(0.56)	deleterious(0.506)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF563	147837	genome.wustl.edu	37	19	12429949	12429949	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145276.2	-1	validated	p.R297Q	0.002	176	0%	352	36.6%	2	50%	benign(0.128)	tolerated(0.6)	neutral(0.015)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF799	90576	genome.wustl.edu	37	19	12501903	12501903	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080821.1	-1	validated	p.R437*	0.002	159	0%	247	32%	7	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF443	10224	genome.wustl.edu	37	19	12541832	12541832	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005815.4	-1	validated	p.R385I	0.971	239	0.4%	343	31.8%	6	66.6%	probably_damaging(0.967)	deleterious(0.03)	deleterious(0.773)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF564	163050	genome.wustl.edu	37	19	12637516	12637516	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144976.3	-1	validated	p.R469I	0.999	192	0%	347	35.7%	15	26.6%	probably_damaging(0.959)	deleterious(0.03)	deleterious(0.767)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ENSG00000246849	0	genome.wustl.edu	37	19	12740110	12740110	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000458122	-1	novel	NULL	0.909	23	0%	31	22.6%	5	40%	-	-	-	-
MAN2B1	4125	genome.wustl.edu	37	19	12759160	12759160	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000528.3	-1	reviewed	p.E831D	0.912	16	0%	35	28.6%	101	26.7%	possibly_damaging(0.831)	deleterious(0.01)	deleterious(0.722)	superfamily_Gal_mut_like,HMMPfam_Glyco_hydro_38C
FBXW9	84261	genome.wustl.edu	37	19	12800211	12800211	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032301.2	-1	validated	p.R426Q	0.957	72	0%	162	39.5%	40	45%	benign(0.321)	tolerated(0.17)	neutral(0.160)	HMMSmart_WD40,superfamily_WD40_like
TNPO2	30000	genome.wustl.edu	37	19	12825664	12825664	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136196.1	-1	validated	p.C287*	1.000	93	0%	191	31.9%	42	30.9%	-	-	-	superfamily_ARM repeat
RNASEH2A	10535	genome.wustl.edu	37	19	12924237	12924237	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006397.2	+1	reviewed	p.R286Q	0.951	59	0%	97	37.1%	109	52.2%	benign(0.028)	tolerated(0.32)	neutral(0.026)	NULL
MAST1	22983	genome.wustl.edu	37	19	12963207	12963207	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014975.2	+1	validated	p.E359*	0.998	36	0%	98	30.6%	0	-	-	-	-	superfamily_Kinase_like
RAD23A	5886	genome.wustl.edu	37	19	13058701	13058701	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005053.2	+1	reviewed	p.R38C	0.035	129	0.8%	446	34.1%	104	45.1%	possibly_damaging(0.916)	deleterious(0.01)	deleterious(0.772)	HMMPfam_ubiquitin,HMMSmart_UBQ,superfamily_SSF54236
CACNA1A	773	genome.wustl.edu	37	19	13372308	13372308	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127222.1	-1	reviewed	p.F1402L	1.000	82	0%	164	29.3%	0	-	probably_damaging(0.999)	tolerated(0.09)	deleterious(0.787)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1A	773	genome.wustl.edu	37	19	13411432	13411432	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127222.1	-1	reviewed	p.L737	0.017	275	0%	480	30.8%	0	-	-	-	-	NULL
CACNA1A	773	genome.wustl.edu	37	19	13445202	13445202	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127222.1	-1	reviewed	p.I396	1.000	135	0%	179	27.9%	0	-	-	-	-	NULL
IL27RA	9466	genome.wustl.edu	37	19	14153555	14153555	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004843.2	+1	reviewed	p.N241S	0.035	201	0%	494	35%	1	0%	benign(0.253)	tolerated(0.81)	neutral(0.026)	superfamily_Fibronectin type III
PALM3	342979	genome.wustl.edu	37	19	14164789	14164789	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145028.1	-1	validated	p.S550	0.000	217	0%	385	32.5%	1	100%	-	-	-	NULL
CD97	976	genome.wustl.edu	37	19	14508888	14508888	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_078481.2	+1	reviewed	p.F278L	0.829	113	0%	233	28.3%	7	0%	possibly_damaging(0.582)	tolerated(0.47)	neutral(0.211)	NULL
CD97	976	genome.wustl.edu	37	19	14517945	14517945	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_078481.2	+1	reviewed	p.F760	0.008	74	0%	165	30.9%	44	0%	-	-	-	HMMPfam_7tm_2,superfamily_Family A G protein-coupled receptor-like
CLEC17A	388512	genome.wustl.edu	37	19	14694206	14694206	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207390.2	+1	validated	p.E27D	0.993	180	0%	405	31.9%	0	-	unknown(0)	deleterious(0)	-	NULL
EMR3	84658	genome.wustl.edu	37	19	14736376	14736376	+	Silent	SNP	G	G	A	rs147270469	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032571.3	-1	reviewed	p.I616	0.000	234	0%	386	30.6%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
ZNF333	84449	genome.wustl.edu	37	19	14829800	14829800	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032433.2	+1	validated	p.R554Q	0.989	53	0%	85	23.5%	6	50%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ENSG00000233422	0	genome.wustl.edu	37	19	14857167	14857167	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000430444	+1	known	NULL	0.000	96	0%	168	33.9%	0	-	-	-	-	-
EMR2	30817	genome.wustl.edu	37	19	14863336	14863336	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000360222	-1	known	p.G399R	0.007	63	0%	146	40.4%	0	-	unknown(0)	-	-	NULL
EMR2	30817	genome.wustl.edu	37	19	14865900	14865900	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013447.2	-1	reviewed	p.E486K	0.207	65	0%	125	30.4%	0	-	unknown(0)	deleterious(0.04)	-	HMMPfam_GPS,HMMSmart_SM00303
OR7C1	26664	genome.wustl.edu	37	19	14910146	14910146	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198944.1	-1	validated	p.S268Y	0.028	121	0%	175	31.4%	0	-	benign(0.042)	tolerated(0.11)	neutral(0.274)	HMMPfam_7tm_1,superfamily_SSF81321
OR7C1	26664	genome.wustl.edu	37	19	14910655	14910655	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198944.1	-1	validated	p.L98	0.001	135	0.7%	190	38.9%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
OR7C1	26664	genome.wustl.edu	37	19	14910749	14910749	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198944.1	-1	validated	p.S67Y	0.989	89	0%	185	30.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
OR7A2P	390894	genome.wustl.edu	37	19	14975160	14975160	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000304105	-1	known	p.F123C	0.900	90	0%	164	39%	0	-	benign(0.358)	deleterious(0)	deleterious(0.558)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
OR7C2	26658	genome.wustl.edu	37	19	15053246	15053246	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012377.1	+1	provisional	p.A316T	0.000	44	0%	57	29.8%	0	-	benign(0)	tolerated(0.64)	neutral(0.003)	NULL
SLC1A6	6511	genome.wustl.edu	37	19	15082625	15082625	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005071.1	-1	provisional	p.F89L	0.989	121	0%	240	31.2%	0	-	benign(0.072)	tolerated(0.24)	neutral(0.042)	HMMPfam_SDF
OR1I1	126370	genome.wustl.edu	37	19	15198156	15198156	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004713.1	+1	provisional	p.F94V	0.018	174	0%	432	31%	0	-	possibly_damaging(0.49)	deleterious(0)	deleterious(0.608)	HMMPfam_7tm_1,superfamily_SSF81321
ILVBL	10994	genome.wustl.edu	37	19	15226687	15226687	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006844.3	-1	reviewed	p.E530K	1.000	89	0%	129	32.6%	76	42.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TPP_enzyme_C,superfamily_Thiamin diphosphate-binding fold (THDP-binding)
RASAL3	64926	genome.wustl.edu	37	19	15562669	15562669	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022904.1	-1	validated	p.T991	0.000	142	0%	239	33.9%	18	0%	-	-	-	NULL
RASAL3	64926	genome.wustl.edu	37	19	15566941	15566941	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022904.1	-1	validated	p.V565	0.987	67	0%	116	31%	11	0%	-	-	-	HMMPfam_RasGAP,HMMSmart_SM00323,superfamily_GTPase activation domain GAP
CYP4F22	126410	genome.wustl.edu	37	19	15648364	15648364	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173483.3	+1	reviewed	p.S147N	0.976	88	0%	115	30.4%	0	-	possibly_damaging(0.839)	tolerated(0.6)	neutral(0.325)	HMMPfam_p450,superfamily_Cytochrome_P450
LOC646575	646575	genome.wustl.edu	37	19	15777837	15777837	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343630.1	+1	model	p.R86I	0.005	56	0%	83	32.5%	0	-	-	-	-	HMMPfam_p450,superfamily_Cytochrome P450
OR10H3	26532	genome.wustl.edu	37	19	15853082	15853082	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013938.1	+1	provisional	p.L294I	0.999	198	0%	370	36.5%	0	-	probably_damaging(0.985)	deleterious(0)	deleterious(0.877)	superfamily_SSF81321
OR10H3	26532	genome.wustl.edu	37	19	15853116	15853116	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013938.1	+1	provisional	p.K305T	0.002	157	0%	291	31.3%	0	-	probably_damaging(0.955)	deleterious(0)	deleterious(0.843)	superfamily_SSF81321
LOC388514	388514	genome.wustl.edu	37	19	15880499	15880499	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_017598.3	-1	model	NULL	0.995	147	0%	190	31.1%	0	-	-	-	-	-
OR10H5	284433	genome.wustl.edu	37	19	15905218	15905218	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004466.1	+1	provisional	p.Y120	0.995	209	0%	341	37%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
CYP4F11	57834	genome.wustl.edu	37	19	16025127	16025127	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128932.1	-1	reviewed	p.S462L	1.000	159	0%	226	26.1%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450
CYP4F11	57834	genome.wustl.edu	37	19	16035655	16035655	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128932.1	-1	reviewed	p.R188I	0.002	132	0%	170	40%	0	-	benign(0.126)	tolerated(0.25)	neutral(0.048)	HMMPfam_p450,superfamily_Cytochrome P450
OR10H4	126541	genome.wustl.edu	37	19	16059859	16059859	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004465.1	+1	validated	p.L14	0.104	288	0%	485	33.8%	0	-	-	-	-	superfamily_SSF81321
EPS15L1	58513	genome.wustl.edu	37	19	16503190	16503190	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021235.1	-1	provisional	p.D676	1.000	216	0%	361	34.3%	24	37.5%	-	-	-	NULL
CALR3	125972	genome.wustl.edu	37	19	16601229	16601229	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145046.3	-1	validated	p.D116Y	0.904	162	0%	367	25.9%	0	-	probably_damaging(0.961)	tolerated(0.29)	neutral(0.433)	HMMPfam_Calreticulin,superfamily_ConA_like_lec_gl
CALR3	125972	genome.wustl.edu	37	19	16601353	16601353	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145046.3	-1	validated	p.F74L	1.000	125	0%	319	37%	0	-	possibly_damaging(0.757)	deleterious(0.01)	deleterious(0.685)	HMMPfam_Calreticulin,superfamily_ConA_like_lec_gl
C19orf44	84167	genome.wustl.edu	37	19	16611602	16611602	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032207.2	+1	validated	e1-1	0.995	70	0%	166	31.9%	3	100%	-	-	-	-
NWD1	284434	genome.wustl.edu	37	19	16860063	16860063	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007525.2	+1	validated	p.A69T	0.407	35	0%	65	18.5%	0	-	benign(0.004)	tolerated(0.23)	neutral(0.042)	NULL
NWD1	284434	genome.wustl.edu	37	19	16923632	16923632	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007525.2	+1	validated	p.R1320H	0.968	273	0%	648	27.9%	0	-	probably_damaging(0.97)	tolerated(0.3)	neutral(0.441)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
SIN3B	23309	genome.wustl.edu	37	19	16973757	16973757	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015260.1	+1	provisional	p.K443N	0.240	88	0%	184	41.3%	5	20%	benign(0.348)	-	-	HMMPfam_HDAC_interact,HMMSmart_SM00761
CPAMD8	27151	genome.wustl.edu	37	19	17032757	17032757	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015692.2	-1	validated	p.S1243F	1.000	36	0%	36	36.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_comp
CPAMD8	27151	genome.wustl.edu	37	19	17038883	17038883	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000443236	-1	known	p.P1160H	1.000	16	0%	30	43.3%	0	-	-	-	-	NULL
CPAMD8	27151	genome.wustl.edu	37	19	17056395	17056395	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000443236	-1	known	p.S977L	0.001	100	0%	177	35%	0	-	-	-	-	NULL
CPAMD8	27151	genome.wustl.edu	37	19	17068726	17068726	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015692.2	-1	validated	e19-1	1.000	84	0%	189	34.4%	0	-	-	-	-	-
CPAMD8	27151	genome.wustl.edu	37	19	17088186	17088186	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015692.2	-1	validated	p.E631K	1.000	53	0%	99	26.3%	0	-	probably_damaging(0.996)	tolerated(0.11)	deleterious(0.733)	HMMPfam_A2M_N_2
CPAMD8	27151	genome.wustl.edu	37	19	17088187	17088187	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000443236	-1	known	p.S641L	0.994	54	0%	100	39%	0	-	-	-	-	HMMPfam_A2M_N_2
USHBP1	83878	genome.wustl.edu	37	19	17367430	17367430	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031941.3	-1	validated	p.K440N	0.962	57	0%	97	26.8%	4	0%	probably_damaging(0.995)	deleterious(0.04)	deleterious(0.806)	NULL
ANKLE1	126549	genome.wustl.edu	37	19	17394685	17394685	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152363.4	+1	validated	p.R371Q	0.000	41	0%	71	45.1%	1	0%	possibly_damaging(0.512)	deleterious(0.01)	deleterious(0.578)	HMMPfam_LEM
ANO8	57719	genome.wustl.edu	37	19	17441746	17441746	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020959.2	-1	validated	p.S295L	1.000	106	0%	259	36.3%	6	66.6%	possibly_damaging(0.794)	deleterious(0)	deleterious(0.742)	NULL
PLVAP	83483	genome.wustl.edu	37	19	17476793	17476793	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031310.1	-1	provisional	p.L161M	0.000	68	0%	162	38.9%	60	0%	probably_damaging(0.996)	tolerated(0.1)	deleterious(0.748)	HMMPfam_PV-1
SLC27A1	376497	genome.wustl.edu	37	19	17597991	17597991	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198580.1	+1	provisional	p.E191K	0.993	60	0%	102	35.3%	5	60%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	HMMPfam_AMP-binding,superfamily_SSF56801
GLT25D1	79709	genome.wustl.edu	37	19	17692199	17692199	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024656.2	+1	provisional	p.K605N	1.000	36	0%	95	40%	61	21.3%	benign(0.132)	tolerated(0.15)	neutral(0.252)	NULL
UNC13A	23025	genome.wustl.edu	37	19	17756565	17756565	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080421.2	-1	validated	p.K846N	1.000	152	0%	245	35.1%	0	-	probably_damaging(0.993)	tolerated(0.24)	deleterious(0.487)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
UNC13A	23025	genome.wustl.edu	37	19	17783243	17783243	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080421.2	-1	validated	p.D160Y	1.000	85	0%	202	31.7%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_C2,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB)
FCHO1	23149	genome.wustl.edu	37	19	17886859	17886859	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015122.2	+1	validated	p.F357L	1.000	55	0%	86	37.2%	1	100%	benign(0.034)	tolerated(1)	neutral(0.002)	NULL
FCHO1	23149	genome.wustl.edu	37	19	17898531	17898531	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015122.2	+1	validated	p.G841	0.993	20	0%	47	38.3%	0	-	-	-	-	NULL
JAK3	3718	genome.wustl.edu	37	19	17945531	17945531	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000215.3	-1	reviewed	e16-1	1.000	26	0%	40	32.5%	0	-	-	-	-	-
KCNN1	3780	genome.wustl.edu	37	19	18092836	18092836	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002248.3	+1	reviewed	p.V273F	1.000	30	0%	39	35.9%	5	0%	possibly_damaging(0.929)	deleterious(0)	deleterious(0.821)	superfamily_Voltage-gated potassium channels
ARRDC2	27106	genome.wustl.edu	37	19	18119353	18119353	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015683.1	+1	validated	p.R78	0.993	6	0.000	9	0.556	1	0%	-	-	-	HMMPfam_Arrestin_N,superfamily_E set domains
IL12RB1	3594	genome.wustl.edu	37	19	18186574	18186574	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005535.1	-1	reviewed	p.V229M	0.681	36	0%	81	43.2%	2	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_Fibronectin type III
MAST3	23031	genome.wustl.edu	37	19	18245425	18245425	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015016.1	+1	validated	p.T507	0.305	60	0%	100	35%	2	0%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
PIK3R2	5296	genome.wustl.edu	37	19	18277023	18277023	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005027.2	+1	validated	p.I490	1.000	51	0%	111	33.3%	32	50%	-	-	-	NULL
KIAA1683	80726	genome.wustl.edu	37	19	18377835	18377835	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145304.1	-1	validated	p.R172H	0.962	62	0%	98	31.6%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
ISYNA1	51477	genome.wustl.edu	37	19	18547677	18547677	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016368.4	-1	validated	p.I142	1.000	7	0.000	15	0.400	49	20.4%	-	-	-	HMMPfam_NAD_binding_5,superfamily_NAD(P)-binding Rossmann-fold domains
UPF1	5976	genome.wustl.edu	37	19	18963849	18963849	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002911.3	+1	reviewed	p.I342	1.000	133	0%	168	39.3%	41	39%	-	-	-	NULL
COPE	11316	genome.wustl.edu	37	19	19015580	19015580	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007263.3	-1	reviewed	p.T193	0.997	31	0%	57	33.3%	504	5.9%	-	-	-	HMMPfam_Coatomer_E,superfamily_TPR-like
COPE	11316	genome.wustl.edu	37	19	19023816	19023816	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007263.3	-1	reviewed	p.L56M	1.000	75	0%	123	26%	376	61.1%	benign(0.386)	tolerated(0.58)	neutral(0.129)	HMMPfam_Coatomer_E
DDX49	54555	genome.wustl.edu	37	19	19038660	19038660	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019070.4	+1	validated	p.E396	1.000	67	0%	159	56%	136	53.6%	-	-	-	superfamily_SSF52540
SUGP2	10147	genome.wustl.edu	37	19	19135606	19135606	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017392.3	-1	reviewed	p.F517	0.449	124	0%	217	30%	20	75%	-	-	-	NULL
SLC25A42	284439	genome.wustl.edu	37	19	19216465	19216465	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178526.3	+1	validated	p.Y103	1.000	24	0%	27	18.5%	1	0%	-	-	-	superfamily_Mitoch_carrier,HMMPfam_Mito_carr
TMEM161A	54929	genome.wustl.edu	37	19	19230787	19230787	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017814.1	-1	provisional	p.L464	0.993	11	0%	22	45.5%	104	27.8%	-	-	-	HMMPfam_Tmemb_161AB
TMEM161A	54929	genome.wustl.edu	37	19	19232372	19232372	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017814.1	-1	provisional	p.R254	0.333	53	0%	104	38.5%	71	43.6%	-	-	-	HMMPfam_Tmemb_161AB
NCAN	1463	genome.wustl.edu	37	19	19344692	19344692	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004386.2	+1	validated	p.F1038	0.102	80	0%	141	36.9%	0	-	-	-	-	HMMPfam_EGF,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196
TM6SF2	53345	genome.wustl.edu	37	19	19380499	19380499	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001524.2	-1	validated	p.L161I	1.000	114	0%	220	25.5%	1	0%	benign(0.33)	tolerated(0.58)	neutral(0.108)	NULL
CILP2	148113	genome.wustl.edu	37	19	19650515	19650515	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153221.2	+1	validated	p.A31V	0.000	34	0%	78	37.2%	0	-	benign(0)	tolerated(0.45)	neutral(0.012)	NULL
LPAR2	9170	genome.wustl.edu	37	19	19737446	19737446	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004720.5	-1	reviewed	p.R216	0.153	8	0.000	16	0.375	18	50%	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
LPAR2	9170	genome.wustl.edu	37	19	19737857	19737857	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004720.5	-1	reviewed	p.L79	1.000	24	0%	37	40.5%	24	50%	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
GMIP	51291	genome.wustl.edu	37	19	19740777	19740777	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016573.2	-1	reviewed	p.L970I	0.306	30	0%	53	26.4%	39	33.3%	possibly_damaging(0.556)	deleterious(0)	deleterious(0.634)	NULL
ZNF14	7561	genome.wustl.edu	37	19	19822367	19822367	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021030.2	-1	reviewed	p.R575*	0.000	109	0%	135	25.2%	14	14.2%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF14	7561	genome.wustl.edu	37	19	19822451	19822451	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021030.2	-1	reviewed	p.R547*	0.001	82	0%	153	33.3%	13	30.7%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF14	7561	genome.wustl.edu	37	19	19822885	19822885	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021030.2	-1	reviewed	p.F402C	0.000	116	0%	175	36.6%	7	57.1%	benign(0.005)	tolerated(0.18)	neutral(0.056)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF253	56242	genome.wustl.edu	37	19	20003051	20003051	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021047.2	+1	provisional	p.R332I	1.000	84	0%	111	34.2%	6	16.6%	benign(0.002)	tolerated(0.18)	neutral(0.056)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF253	56242	genome.wustl.edu	37	19	20003303	20003303	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021047.2	+1	provisional	p.R416I	0.007	90	0%	107	33.6%	10	40%	benign(0.028)	tolerated(0.26)	neutral(0.036)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF93	81931	genome.wustl.edu	37	19	20026119	20026119	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031218.3	+1	validated	p.E12K	0.039	220	0%	288	33%	4	50%	possibly_damaging(0.728)	deleterious(0.01)	deleterious(0.671)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF682	91120	genome.wustl.edu	37	19	20117061	20117061	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033196.2	-1	validated	p.R417I	0.997	153	0%	243	32.9%	3	66.6%	probably_damaging(0.999)	tolerated(0.42)	deleterious(0.504)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF682	91120	genome.wustl.edu	37	19	20117929	20117929	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033196.2	-1	validated	p.E128*	0.000	236	0%	363	19%	1	0%	-	-	-	NULL
ZNF682	91120	genome.wustl.edu	37	19	20118078	20118078	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033196.2	-1	validated	p.S78Y	0.007	132	0%	263	32.7%	2	50%	probably_damaging(0.981)	tolerated(1)	neutral(0.425)	NULL
ZNF90	7643	genome.wustl.edu	37	19	20230151	20230151	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007138.1	+1	validated	p.K596N	0.327	31	0%	45	28.9%	5	80%	benign(0.039)	deleterious(0)	neutral(0.447)	NULL
ENSG00000213985	0	genome.wustl.edu	37	19	20369811	20369811	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000397155	+1	known	p.E258*	1.000	224	0%	476	29.6%	0	-	-	-	-	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067
ZNF626	199777	genome.wustl.edu	37	19	20808256	20808256	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001076675.2	-1	validated	p.K143Q	0.074	274	0%	370	31.4%	1	0%	probably_damaging(0.991)	deleterious(0.02)	deleterious(0.827)	superfamily_C2H2 and C2HC zinc fingers
ZNF85	7639	genome.wustl.edu	37	19	21132993	21132993	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003429.3	+1	validated	p.R558I	1.000	62	0%	46	39.1%	3	66.6%	benign(0.002)	tolerated(0.22)	neutral(0.042)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF493	284443	genome.wustl.edu	37	19	21606667	21606667	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001076678.2	+1	validated	p.E402D	1.000	35	0%	40	20%	0	-	benign(0.363)	deleterious(0.02)	deleterious(0.498)	superfamily_C2H2 and C2HC zinc fingers
ZNF493	284443	genome.wustl.edu	37	19	21607296	21607296	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001076678.2	+1	validated	p.R612Q	0.000	40	0%	53	34%	1	100%	benign(0.056)	tolerated(0.45)	neutral(0.015)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF493	284443	genome.wustl.edu	37	19	21607358	21607358	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001076678.2	+1	validated	p.E633*	0.125	48	0%	46	32.6%	1	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ENSG00000196686	0	genome.wustl.edu	37	19	21608032	21608032	+	RNA	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000341265	-1	novel	NULL	0.018	23	0%	10	50%	0	-	-	-	-	-
ZNF429	353088	genome.wustl.edu	37	19	21719517	21719517	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001415.2	+1	provisional	p.R221I	0.799	138	0%	173	34.1%	1	0%	benign(0.009)	tolerated(0.14)	neutral(0.250)	NULL
ZNF100	163227	genome.wustl.edu	37	19	21910340	21910340	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173531.3	-1	validated	p.E258D	1.000	96	0%	111	37.8%	7	100%	possibly_damaging(0.582)	tolerated(0.07)	deleterious(0.519)	superfamily_C2H2 and C2HC zinc fingers
ZNF43	7594	genome.wustl.edu	37	19	21990427	21990427	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003423.2	-1	validated	p.T804	0.000	141	0%	159	35.2%	6	66.6%	-	-	-	NULL
ZNF43	7594	genome.wustl.edu	37	19	21992001	21992001	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003423.2	-1	validated	p.R280C	0.991	71	0%	82	28%	1	0%	benign(0.017)	deleterious(0)	neutral(0.445)	superfamily_C2H2 and C2HC zinc fingers
ZNF208	7757	genome.wustl.edu	37	19	22154842	22154842	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007153.3	-1	provisional	p.E870D	1.000	206	0%	156	30.1%	0	-	probably_damaging(0.982)	tolerated(0.08)	deleterious(0.726)	superfamily_SSF57667
ZNF676	163223	genome.wustl.edu	37	19	22375863	22375863	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001411.2	-1	provisional	p.E29*	0.954	252	0%	212	30.2%	1	0%	-	-	-	HMMSmart_KRAB
LOC100287226	100287226	genome.wustl.edu	37	19	22498977	22498977	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343636.1	+1	model	p.F787V	0.000	48	0%	35	42.9%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
LOC100287226	100287226	genome.wustl.edu	37	19	22499205	22499205	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343636.1	+1	model	p.E863*	0.000	110	0%	114	27.2%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
LOC100287226	100287226	genome.wustl.edu	37	19	22499625	22499625	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343636.1	+1	model	p.E1003*	0.685	40	0%	40	52.5%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
LOC100287226	100287226	genome.wustl.edu	37	19	22499889	22499889	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343636.1	+1	model	p.L1091F	0.596	30	0%	31	29%	0	-	-	-	-	NULL
ZNF98	148198	genome.wustl.edu	37	19	22574928	22574928	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098626.1	-1	validated	p.R370I	0.994	98	0%	130	15.4%	0	-	benign(0.038)	tolerated(0.29)	neutral(0.031)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF98	148198	genome.wustl.edu	37	19	22575347	22575347	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098626.1	-1	validated	p.R230S	0.998	178	0%	232	34.9%	0	-	possibly_damaging(0.934)	tolerated(0.08)	deleterious(0.680)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF98	148198	genome.wustl.edu	37	19	22575445	22575445	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098626.1	-1	validated	p.A198T	0.000	145	0%	145	31.7%	0	-	benign(0)	tolerated(1)	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF492	57615	genome.wustl.edu	37	19	22847037	22847037	+	Missense_Mutation	SNP	G	G	T	rs186644138	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020855.2	+1	validated	p.R189I	0.939	177	0%	210	30%	1	100%	benign(0.001)	tolerated(0.14)	neutral(0.249)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF99	7652	genome.wustl.edu	37	19	22952756	22952756	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080409.1	-1	provisional	p.R10I	0.001	151	0%	193	34.2%	0	-	benign(0.001)	-	-	NULL
LOC646864	646864	genome.wustl.edu	37	19	23040894	23040894	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001726885.1	+1	model	p.E430*	0.112	32	0%	33	18.2%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF730	100129543	genome.wustl.edu	37	19	23316912	23316912	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001719792.2	+1	model	p.E54*	0.077	115	0%	178	24.7%	0	-	-	-	-	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
LOC100131479	100131479	genome.wustl.edu	37	19	23779473	23779473	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001719802.1	+1	model	p.E66*	0.003	16	0%	18	33.3%	0	-	-	-	-	superfamily_C2H2 and C2HC zinc fingers
ZNF675	171392	genome.wustl.edu	37	19	23836069	23836069	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138330.2	-1	validated	p.K556Q	0.964	292	0%	406	34.7%	7	42.8%	benign(0.408)	tolerated(0.1)	neutral(0.418)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF675	171392	genome.wustl.edu	37	19	23836482	23836482	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138330.2	-1	validated	p.H418R	1.000	73	0%	121	38%	10	70%	benign(0.393)	deleterious(0)	deleterious(0.571)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF681	148213	genome.wustl.edu	37	19	23926946	23926946	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138286.2	-1	validated	p.K469T	0.976	89	0%	130	35.4%	5	100%	probably_damaging(0.964)	deleterious(0.01)	deleterious(0.812)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF726	730087	genome.wustl.edu	37	19	24102249	24102249	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000322487	+1	known	p.K26N	0.044	207	0%	216	37.5%	0	-	benign(0.429)	deleterious(0.04)	deleterious(0.488)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF726	730087	genome.wustl.edu	37	19	24116645	24116645	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000322487	+1	known	p.R576Q	0.000	50	0%	39	33.3%	0	-	benign(0.039)	tolerated(0.59)	neutral(0.006)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF254	9534	genome.wustl.edu	37	19	24309339	24309339	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203282.2	+1	validated	p.K179N	1.000	62	0%	32	40.6%	1	100%	benign(0.175)	tolerated(0.17)	neutral(0.075)	superfamily_C2H2 and C2HC zinc fingers
ZNF254	9534	genome.wustl.edu	37	19	24310667	24310667	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203282.2	+1	validated	p.R622I	1.000	66	0%	62	24.2%	10	20%	benign(0)	tolerated(0.52)	neutral(0.009)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
UQCRFS1	7386	genome.wustl.edu	37	19	29698967	29698967	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006003.2	-1	validated	p.E105*	0.996	114	0%	137	27%	91	31.8%	-	-	-	HMMPfam_UCR_TM,superfamily_UCR_TM_region
ZNF536	9745	genome.wustl.edu	37	19	31038887	31038887	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014717.1	+1	provisional	p.A787	0.906	41	0%	57	33.3%	0	-	-	-	-	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF536	9745	genome.wustl.edu	37	19	31039313	31039313	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014717.1	+1	provisional	p.S929	0.998	108	0%	115	32.2%	0	-	-	-	-	NULL
ZNF536	9745	genome.wustl.edu	37	19	31039609	31039609	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014717.1	+1	provisional	p.A1028V	0.997	85	0%	126	41.3%	0	-	benign(0.247)	deleterious(0)	deleterious(0.470)	NULL
ZNF536	9745	genome.wustl.edu	37	19	31039710	31039710	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014717.1	+1	provisional	p.D1062Y	1.000	114	0%	132	34.1%	0	-	possibly_damaging(0.444)	deleterious(0.02)	deleterious(0.528)	NULL
TSHZ3	57616	genome.wustl.edu	37	19	31770503	31770503	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020856.2	-1	validated	p.E66K	1.000	110	0%	133	34.6%	0	-	benign(0.388)	tolerated(0.63)	neutral(0.128)	NULL
ANKRD27	84079	genome.wustl.edu	37	19	33130312	33130312	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032139.2	-1	validated	p.E356K	0.996	128	0.8%	235	33.2%	3	33.3%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_VPS9,HMMSmart_VPS9,superfamily_SSF109993
ANKRD27	84079	genome.wustl.edu	37	19	33135274	33135274	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032139.2	-1	validated	p.R161Q	0.721	115	0.9%	218	27.1%	5	80%	possibly_damaging(0.727)	tolerated(0.54)	neutral(0.272)	superfamily_SSF109993
NUDT19	390916	genome.wustl.edu	37	19	33202821	33202821	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105570.1	+1	validated	p.H362	0.002	89	0%	167	29.9%	13	23%	-	-	-	NULL
TDRD12	91646	genome.wustl.edu	37	19	33246901	33246901	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001110822.1	+1	validated	p.C196S	1.000	135	0%	197	31%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
SLC7A9	11136	genome.wustl.edu	37	19	33324149	33324149	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001126335.1	-1	reviewed	p.W435C	0.740	132	0%	202	33.7%	0	-	benign(0.184)	tolerated(0.11)	neutral(0.289)	HMMPfam_AA_permease
SLC7A9	11136	genome.wustl.edu	37	19	33333094	33333094	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001126335.1	-1	reviewed	p.E402*	1.000	101	0%	171	33.3%	1	0%	-	-	-	HMMPfam_AA_permease
CEP89	84902	genome.wustl.edu	37	19	33422329	33422329	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000427840	-1	known	p.T345	0.335	94	0%	144	34.7%	0	-	-	-	-	NULL
C19orf40	91442	genome.wustl.edu	37	19	33464384	33464384	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152266.3	+1	validated	p.S53	0.426	160	0.6%	359	34%	1	0%	-	-	-	NULL
GPATCH1	55094	genome.wustl.edu	37	19	33617499	33617499	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018025.2	+1	provisional	p.K875N	1.000	72	0%	271	34.7%	9	55.5%	unknown(0)	tolerated(0.11)	-	NULL
CHST8	64377	genome.wustl.edu	37	19	34180227	34180227	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127895.1	+1	validated	p.F20	0.757	41	0%	60	45%	0	-	-	-	-	NULL
CHST8	64377	genome.wustl.edu	37	19	34263626	34263626	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127895.1	+1	validated	p.F311	0.981	37	0%	57	29.8%	1	0%	-	-	-	HMMPfam_Sulfotransfer_2
CHST8	64377	genome.wustl.edu	37	19	34263790	34263790	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127895.1	+1	validated	p.R366Q	0.000	33	0%	53	32.1%	0	-	benign(0.007)	tolerated(0.12)	neutral(0.261)	HMMPfam_Sulfotransfer_2
LSM14A	26065	genome.wustl.edu	37	19	34663592	34663592	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114093.1	+1	validated	p.I15	1.000	40	0%	36	41.7%	53	32%	-	-	-	NULL
UBA2	10054	genome.wustl.edu	37	19	34929585	34929585	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005499.2	+1	validated	p.P165	0.979	183	0%	414	33.1%	42	52.3%	-	-	-	superfamily_MoeB,HMMPfam_UBA_e1_thiolCys
UBA2	10054	genome.wustl.edu	37	19	34935922	34935922	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005499.2	+1	validated	p.E223K	1.000	107	0%	193	34.7%	34	23.5%	benign(0.003)	tolerated(0.92)	-	superfamily_MoeB
UBA2	10054	genome.wustl.edu	37	19	34941179	34941179	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005499.2	+1	validated	p.D261Y	1.000	213	0%	427	29.7%	23	26%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_MoeB
SCGB2B2	284402	genome.wustl.edu	37	19	35085235	35085235	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025591.2	-1	validated	p.L31I	0.085	86	0%	163	37.4%	0	-	benign(0.35)	-	-	superfamily_Secretoglobin
ZNF302	55900	genome.wustl.edu	37	19	35175242	35175242	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012320.1	+1	validated	p.E100	0.027	61	0%	45	40%	3	33.3%	-	-	-	NULL
ZNF181	339318	genome.wustl.edu	37	19	35231636	35231636	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029997.3	+1	validated	p.S117Y	0.868	56	0%	38	18.4%	1	0%	benign(0.032)	tolerated(0.64)	neutral(0.005)	NULL
ZNF181	339318	genome.wustl.edu	37	19	35232476	35232476	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029997.3	+1	validated	p.R397I	0.994	220	0%	168	21.4%	5	40%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF599	148103	genome.wustl.edu	37	19	35249961	35249961	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007248.2	-1	validated	p.R582Q	0.996	155	0%	186	35.5%	4	25%	benign(0.001)	tolerated(1)	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF30	90075	genome.wustl.edu	37	19	35435353	35435353	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099437.1	+1	validated	p.R496*	0.000	167	0%	231	33.3%	3	66.6%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
FXYD7	53822	genome.wustl.edu	37	19	35642349	35642349	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022006.1	+1	reviewed	p.K48T	1.000	189	0%	440	11.6%	0	-	probably_damaging(0.979)	deleterious(0.02)	deleterious(0.805)	HMMPfam_ATP1G1_PLM_MAT8
MAG	4099	genome.wustl.edu	37	19	35801544	35801544	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002361.2	+1	reviewed	p.R538	0.995	88	0%	162	29%	0	-	-	-	-	NULL
CD22	933	genome.wustl.edu	37	19	35829139	35829139	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001771.3	+1	validated	p.L352I	0.322	150	0%	300	26%	1	0%	benign(0.002)	tolerated(0.56)	neutral(0.006)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
CD22	933	genome.wustl.edu	37	19	35831819	35831819	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001771.3	+1	validated	p.P429S	0.000	153	0%	307	29%	0	-	possibly_damaging(0.616)	tolerated(0.53)	neutral(0.222)	HMMSmart_SM00409,superfamily_Immunoglobulin
CD22	933	genome.wustl.edu	37	19	35837568	35837568	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001771.3	+1	validated	p.E838*	0.107	58	0%	126	28.6%	4	0%	-	-	-	NULL
ATP4A	495	genome.wustl.edu	37	19	36045841	36045841	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000704.2	-1	reviewed	p.E822K	1.000	188	0%	399	33.1%	0	-	possibly_damaging(0.675)	deleterious(0)	deleterious(0.684)	HMMPfam_Cation_ATPase_C,superfamily_SSF81665
ATP4A	495	genome.wustl.edu	37	19	36047938	36047938	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000704.2	-1	reviewed	p.F582	0.992	73	0%	112	36.6%	0	-	-	-	-	HMMPfam_Hydrolase,superfamily_SSF56784,superfamily_SSF81660,superfamily_SSF81665
NPHS1	4868	genome.wustl.edu	37	19	36317501	36317501	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004646.3	-1	reviewed	p.R1214I	0.462	76	0%	147	34%	0	-	benign(0.312)	tolerated(0.15)	neutral(0.339)	NULL
NPHS1	4868	genome.wustl.edu	37	19	36332686	36332686	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004646.3	-1	reviewed	p.A916T	0.998	188	0.5%	360	26.4%	0	-	possibly_damaging(0.699)	deleterious(0.01)	deleterious(0.657)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
NPHS1	4868	genome.wustl.edu	37	19	36336313	36336313	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004646.3	-1	reviewed	p.E629	0.603	27	0%	38	50%	0	-	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_C2-set_2,superfamily_Immunoglobulin
APLP1	333	genome.wustl.edu	37	19	36365459	36365459	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024807.1	+1	reviewed	p.Q370	1.000	24	0%	41	41.5%	3	33.3%	-	-	-	superfamily_CAPPD an extracellular domain of amyloid beta A4 protein
APLP1	333	genome.wustl.edu	37	19	36369535	36369535	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024807.1	+1	reviewed	p.P543	0.137	56	0%	129	31.8%	0	-	-	-	-	NULL
ALKBH6	84964	genome.wustl.edu	37	19	36503975	36503975	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032878.3	-1	validated	p.Y52C	1.000	138	0%	313	33.5%	39	38.4%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
ZNF565	147929	genome.wustl.edu	37	19	36673743	36673743	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042474.1	-1	validated	p.H375	0.000	100	0%	174	31.6%	6	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZFP82	284406	genome.wustl.edu	37	19	36896562	36896562	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133466.2	-1	provisional	p.S50Y	1.000	233	0%	392	22.2%	2	50%	probably_damaging(0.998)	tolerated(0.16)	deleterious(0.534)	HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
LOC644189	644189	genome.wustl.edu	37	19	36913052	36913052	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_016949.3	+1	model	NULL	1.000	70	0%	130	30.8%	0	-	-	-	-	-
ZNF566	84924	genome.wustl.edu	37	19	36940725	36940725	+	Silent	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145343.1	-1	validated	p.G138	0.049	127	0%	228	33.3%	3	66.6%	-	-	-	NULL
ZNF260	339324	genome.wustl.edu	37	19	37005202	37005202	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012756.2	-1	validated	p.F313L	0.202	186	0%	401	33.2%	3	33.3%	possibly_damaging(0.855)	deleterious(0)	deleterious(0.774)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF529	57711	genome.wustl.edu	37	19	37038616	37038616	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145649.1	-1	validated	p.F282V	0.974	97	0%	199	37.7%	5	60%	benign(0.026)	deleterious(0)	neutral(0.446)	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF382	84911	genome.wustl.edu	37	19	37117614	37117614	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032825.3	+1	validated	p.K272T	0.671	25	0%	50	38%	2	50%	benign(0.304)	deleterious(0.03)	neutral(0.459)	NULL
ZNF790	388536	genome.wustl.edu	37	19	37309594	37309594	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_206894.2	-1	validated	p.R551Q	0.005	137	0%	190	33.7%	5	40%	possibly_damaging(0.666)	tolerated(0.93)	neutral(0.236)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF829	374899	genome.wustl.edu	37	19	37383166	37383166	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037232.3	-1	validated	p.R176I	1.000	178	0%	257	33.1%	1	0%	probably_damaging(0.997)	tolerated(0.07)	deleterious(0.785)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF568	374900	genome.wustl.edu	37	19	37488089	37488089	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000455427	+1	known	p.R435I	0.822	17	0%	32	21.9%	0	-	probably_damaging(0.975)	deleterious(0.01)	deleterious(0.823)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF568	374900	genome.wustl.edu	37	19	37488163	37488163	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000455427	+1	known	p.R460*	0.000	24	0%	34	35.3%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF585B	92285	genome.wustl.edu	37	19	37676779	37676779	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152279.3	-1	validated	p.E554K	0.003	223	0%	270	27.4%	3	33.3%	benign(0.005)	deleterious(0.05)	neutral(0.345)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF585B	92285	genome.wustl.edu	37	19	37676978	37676978	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152279.3	-1	validated	p.T487	0.744	203	0%	320	36.2%	4	25%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF383	163087	genome.wustl.edu	37	19	37734271	37734271	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152604.1	+1	provisional	p.S378N	0.085	108	0%	124	21%	13	61.5%	benign(0.18)	tolerated(0.42)	neutral(0.030)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF527	84503	genome.wustl.edu	37	19	37879441	37879441	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032453.1	+1	validated	p.E164*	0.008	70	0%	148	34.5%	2	100%	-	-	-	NULL
ZNF527	84503	genome.wustl.edu	37	19	37880730	37880730	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032453.1	+1	validated	p.C593	0.000	60	0%	70	25.7%	4	75%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF569	148266	genome.wustl.edu	37	19	37904690	37904690	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152484.2	-1	validated	p.K290N	0.995	134	0%	157	35.7%	1	0%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF540	163255	genome.wustl.edu	37	19	38102613	38102613	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152606.3	+1	validated	p.I144	0.000	109	0%	164	31.7%	1	0%	-	-	-	NULL
ZNF540	163255	genome.wustl.edu	37	19	38102710	38102710	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152606.3	+1	validated	p.Q177K	0.959	90	0%	100	37%	0	-	benign(0.118)	tolerated(0.21)	neutral(0.053)	NULL
ZFP30	22835	genome.wustl.edu	37	19	38125985	38125985	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014898.2	-1	validated	p.R486I	1.000	126	0%	221	28.1%	2	100%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZFP30	22835	genome.wustl.edu	37	19	38126825	38126825	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014898.2	-1	validated	p.R206I	1.000	131	0%	215	32.1%	1	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF781	163115	genome.wustl.edu	37	19	38160221	38160221	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152605.3	-1	validated	p.E277K	0.970	189	0%	298	30.2%	2	0%	possibly_damaging(0.936)	tolerated(0.05)	deleterious(0.727)	NULL
ZNF781	163115	genome.wustl.edu	37	19	38160724	38160724	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152605.3	-1	validated	p.R109I	1.000	183	0%	242	32.2%	0	-	possibly_damaging(0.541)	tolerated(0.06)	deleterious(0.506)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF781	163115	genome.wustl.edu	37	19	38160901	38160901	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152605.3	-1	validated	p.Q50R	0.982	188	0%	298	32.9%	0	-	benign(0.027)	tolerated(0.33)	neutral(0.026)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF573	126231	genome.wustl.edu	37	19	38229764	38229764	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152360.3	-1	validated	p.L485I	0.000	69	0%	98	22.4%	0	-	possibly_damaging(0.598)	tolerated(0.49)	neutral(0.217)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF573	126231	genome.wustl.edu	37	19	38230072	38230072	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152360.3	-1	validated	p.K382T	0.963	101	0%	160	30.6%	2	50%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_SSF57667
ZNF573	126231	genome.wustl.edu	37	19	38230846	38230846	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152360.3	-1	validated	p.R124I	0.046	139	0%	245	32.7%	0	-	probably_damaging(0.995)	tolerated(0.14)	deleterious(0.707)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
WDR87	83889	genome.wustl.edu	37	19	38376888	38376888	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031951.3	-1	provisional	p.E2436*	0.001	113	0%	164	22.6%	0	-	-	-	-	NULL
WDR87	83889	genome.wustl.edu	37	19	38376913	38376913	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031951.3	-1	provisional	p.R2427S	0.000	118	0%	156	33.3%	0	-	unknown(0)	-	-	NULL
WDR87	83889	genome.wustl.edu	37	19	38378956	38378956	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031951.3	-1	provisional	p.K1746N	0.036	282	0%	490	31.6%	1	0%	possibly_damaging(0.553)	-	-	superfamily_WD40 repeat-like,superfamily_ARM repeat
WDR87	83889	genome.wustl.edu	37	19	38386786	38386786	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000447313	-1	known	p.E80*	0.995	48	0%	141	43.3%	0	-	-	-	-	NULL
SIPA1L3	23094	genome.wustl.edu	37	19	38597229	38597229	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015073.1	+1	validated	p.I694	1.000	105	0%	230	33.9%	8	62.5%	-	-	-	HMMPfam_Rap_GAP,superfamily_SSF111347
SPRED3	399473	genome.wustl.edu	37	19	38885327	38885327	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042522.1	+1	validated	p.E156D	1.000	17	0%	13	30.8%	0	-	benign(0.181)	tolerated(0.49)	neutral(0.027)	NULL
RASGRP4	115727	genome.wustl.edu	37	19	38910507	38910507	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_170604.2	-1	reviewed	p.A219V	0.658	37	0%	71	42.3%	0	-	probably_damaging(0.987)	deleterious(0.04)	deleterious(0.785)	HMMPfam_RasGEF,HMMSmart_SM00147,superfamily_Ras GEF
RYR1	6261	genome.wustl.edu	37	19	38959671	38959671	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000540.2	+1	reviewed	p.G1149	0.997	108	0%	123	35.8%	0	-	-	-	-	HMMPfam_SPRY,HMMSmart_SM00449
RYR1	6261	genome.wustl.edu	37	19	38979972	38979972	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000540.2	+1	reviewed	p.Q1901H	0.991	133	0%	307	39.4%	0	-	possibly_damaging(0.435)	-	-	NULL
RYR1	6261	genome.wustl.edu	37	19	38997132	38997132	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000540.2	+1	reviewed	p.E2880*	0.999	52	0%	103	23.3%	0	-	-	-	-	HMMPfam_RyR
RYR1	6261	genome.wustl.edu	37	19	39018951	39018951	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000540.2	+1	reviewed	p.E3610D	1.000	26	0%	44	36.4%	0	-	probably_damaging(0.992)	-	-	NULL
RYR1	6261	genome.wustl.edu	37	19	39025821	39025821	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000540.2	+1	reviewed	p.G3800	1.000	74	0%	213	34.3%	0	-	-	-	-	NULL
RYR1	6261	genome.wustl.edu	37	19	39062862	39062862	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000540.2	+1	reviewed	p.L4650	0.898	69	0%	162	39.5%	2	0%	-	-	-	HMMPfam_RR_TM4-6
RYR1	6261	genome.wustl.edu	37	19	39075688	39075688	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000540.2	+1	reviewed	p.D4918N	1.000	219	0%	398	26.6%	1	0%	unknown(0)	-	-	HMMPfam_Ion_trans
MAP4K1	11184	genome.wustl.edu	37	19	39090565	39090565	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007181.4	-1	validated	p.G557*	1.000	132	0%	324	25.6%	0	-	-	-	-	HMMPfam_CNH,HMMSmart_CNH
ACTN4	81	genome.wustl.edu	37	19	39200067	39200067	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004924.3	+1	reviewed	p.F228	0.958	92	0%	183	32.8%	260	36.5%	-	-	-	HMMPfam_CH,HMMSmart_CH,superfamily_Calponin-homology
CAPN12	147968	genome.wustl.edu	37	19	39224962	39224962	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144691.3	-1	validated	p.F604	1.000	85	0%	174	38.5%	0	-	-	-	-	superfamily_SSF47473
SIRT2	22933	genome.wustl.edu	37	19	39374313	39374313	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012237.2	-1	reviewed	p.C195	0.029	56	0%	108	35.2%	46	39.1%	-	-	-	HMMPfam_SIR2,superfamily_DHS-like NAD/FAD-binding domain
SARS2	54938	genome.wustl.edu	37	19	39410738	39410738	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017827.3	-1	reviewed	p.I214N	1.000	61	0%	128	26.6%	11	27.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF55681
PAPL	390928	genome.wustl.edu	37	19	39591447	39591447	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004318.2	+1	validated	p.R254H	0.996	68	1.5%	110	34.5%	0	-	benign(0.001)	tolerated(0.54)	neutral(0.007)	HMMPfam_Metallophos,superfamily_SSF56300
PLEKHG2	64857	genome.wustl.edu	37	19	39911448	39911448	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022835.2	+1	validated	p.R452Q	0.960	68	0%	159	27%	20	40%	possibly_damaging(0.647)	deleterious(0.01)	deleterious(0.633)	NULL
PLEKHG2	64857	genome.wustl.edu	37	19	39912917	39912917	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022835.2	+1	validated	p.R556*	0.981	86	0%	179	32.4%	29	44.8%	-	-	-	NULL
SUPT5H	6829	genome.wustl.edu	37	19	39959477	39959477	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001111020.2	+1	validated	p.F373L	1.000	133	0%	246	32.9%	95	42.1%	benign(0.006)	deleterious(0.04)	neutral(0.349)	NULL
FCGBP	8857	genome.wustl.edu	37	19	40411805	40411805	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003890.2	-1	validated	p.V1275M	0.619	88	0%	163	35%	0	-	probably_damaging(1)	tolerated(0.11)	deleterious(0.772)	HMMPfam_VWD,HMMSmart_VWD
FCGBP	8857	genome.wustl.edu	37	19	40419672	40419672	+	Missense_Mutation	SNP	C	C	T	rs138262646	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003890.2	-1	validated	p.A1108T	0.088	23	0%	47	27.7%	0	-	benign(0.067)	tolerated(1)	neutral(0.004)	HMMPfam_C8
ZNF546	339327	genome.wustl.edu	37	19	40519615	40519615	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178544.3	+1	validated	p.K146N	0.010	44	0%	76	36.8%	0	-	possibly_damaging(0.642)	tolerated(0.52)	neutral(0.234)	NULL
ZNF546	339327	genome.wustl.edu	37	19	40520055	40520055	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178544.3	+1	validated	p.R293I	1.000	147	0%	233	39.1%	1	100%	possibly_damaging(0.657)	tolerated(0.11)	deleterious(0.503)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF546	339327	genome.wustl.edu	37	19	40521567	40521567	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178544.3	+1	validated	p.R797I	1.000	97	0%	143	25.2%	0	-	possibly_damaging(0.693)	deleterious(0.04)	deleterious(0.597)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF780B	163131	genome.wustl.edu	37	19	40540616	40540616	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005851.2	-1	validated	p.R717Q	0.000	91	0%	132	43.2%	0	-	probably_damaging(0.995)	tolerated(0.67)	neutral(0.460)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF780B	163131	genome.wustl.edu	37	19	40541540	40541540	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005851.2	-1	validated	p.S409I	0.001	205	0%	227	31.7%	1	0%	probably_damaging(0.998)	tolerated(0.42)	deleterious(0.488)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF780B	163131	genome.wustl.edu	37	19	40541575	40541575	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005851.2	-1	validated	p.S397	0.353	182	0%	203	31.5%	1	100%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF780A	284323	genome.wustl.edu	37	19	40581300	40581300	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142577.1	-1	validated	p.R351Q	0.000	179	0%	247	25.5%	2	0%	possibly_damaging(0.498)	tolerated(0.39)	neutral(0.182)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF780A	284323	genome.wustl.edu	37	19	40589110	40589110	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142577.1	-1	validated	p.F15C	0.994	267	0%	338	24%	7	28.5%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
AKT2	208	genome.wustl.edu	37	19	40741869	40741869	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001626.3	-1	reviewed	p.R368H	1.000	65	0%	131	29%	54	35.1%	probably_damaging(0.98)	tolerated(0.47)	neutral(0.435)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
PRX	57716	genome.wustl.edu	37	19	40902198	40902198	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181882.2	-1	reviewed	p.K687N	0.000	81	0%	172	39.5%	3	0%	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	NULL
PRX	57716	genome.wustl.edu	37	19	40902483	40902483	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181882.2	-1	reviewed	p.E592D	0.000	58	0%	87	26.4%	3	33.3%	benign(0.035)	tolerated(0.32)	neutral(0.026)	NULL
SPTBN4	57731	genome.wustl.edu	37	19	41029461	41029461	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020971.2	+1	reviewed	p.A1258T	1.000	40	0%	66	36.4%	0	-	benign(0)	tolerated(0.11)	neutral(0.272)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
SHKBP1	92799	genome.wustl.edu	37	19	41083514	41083514	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138392.3	+1	validated	p.R80C	1.000	56	0%	170	29.4%	62	40.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_POZ domain
LTBP4	8425	genome.wustl.edu	37	19	41117096	41117096	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000308370	+1	known	p.R684*	0.968	75	0%	76	32.9%	22	0%	-	-	-	HMMSmart_EGF_CA,superfamily_Grow_fac_recept,HMMPfam_EGF_CA,PatternScan_EGF_CA
LTBP4	8425	genome.wustl.edu	37	19	41118989	41118989	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000308370	+1	known	p.S840L	0.038	70	0%	119	33.6%	27	0%	probably_damaging(0.983)	deleterious(0.03)	deleterious(0.793)	HMMSmart_EGF_CA,superfamily_Grow_fac_recept,HMMPfam_EGF_CA,PatternScan_EGF_CA
LTBP4	8425	genome.wustl.edu	37	19	41119033	41119033	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000308370	+1	known	p.E855K	0.273	41	0%	86	36%	24	0%	benign(0.002)	tolerated(0.34)	neutral(0.023)	PatternScan_ASX_HYDROXYL,HMMSmart_EGF_CA,superfamily_Grow_fac_recept,HMMPfam_EGF_CA,PatternScan_EGF_CA
LTBP4	8425	genome.wustl.edu	37	19	41125350	41125350	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000308370	+1	known	p.E1123*	1.000	125	0%	256	30.9%	50	6%	-	-	-	HMMSmart_EGF
LTBP4	8425	genome.wustl.edu	37	19	41132887	41132887	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042544.1	+1	reviewed	p.S1398L	0.997	93	0%	108	40.7%	65	10.7%	-	-	-	NULL
ADCK4	79934	genome.wustl.edu	37	19	41211272	41211272	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024876.3	-1	validated	p.R150*	1.000	51	0%	85	32.9%	22	18.1%	-	-	-	NULL
CYP2A6	1548	genome.wustl.edu	37	19	41349830	41349830	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000762.5	-1	reviewed	p.F452L	0.988	272	0%	608	14.3%	0	-	benign(0.049)	tolerated(0.17)	neutral(0.062)	HMMPfam_p450,superfamily_Cytochrome P450
CYP2A6	1548	genome.wustl.edu	37	19	41351219	41351219	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000762.5	-1	reviewed	p.R381W	0.003	129	0%	197	24.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_p450,superfamily_Cytochrome P450
CYP2A7	1549	genome.wustl.edu	37	19	41381727	41381727	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000764.2	-1	reviewed	p.F452L	0.967	196	0%	392	20.2%	1	0%	benign(0.006)	tolerated(0.16)	neutral(0.059)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP2B7P1	1556	genome.wustl.edu	37	19	41450344	41450344	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_001278.1	+1	provisional	NULL	1.000	106	0%	152	27%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	-
CYP2B6	1555	genome.wustl.edu	37	19	41512960	41512960	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000767.4	+1	reviewed	p.V212A	0.002	141	0%	299	39.1%	0	-	benign(0)	tolerated(0.23)	neutral(0.042)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP2A13	1553	genome.wustl.edu	37	19	41597656	41597656	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000766.3	+1	reviewed	p.S225L	0.000	210	0.5%	396	32.1%	0	-	benign(0.076)	tolerated(0.32)	neutral(0.029)	HMMPfam_p450,superfamily_Cytochrome_P450
CYP2F1	1572	genome.wustl.edu	37	19	41622247	41622247	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000774.3	+1	reviewed	p.L52M	0.000	108	0%	215	34.4%	0	-	possibly_damaging(0.685)	tolerated(0.22)	neutral(0.286)	HMMPfam_p450,superfamily_Cytochrome P450
AXL	558	genome.wustl.edu	37	19	41762393	41762393	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021913.3	+1	reviewed	p.F691	0.969	103	1%	200	35.5%	12	0%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
BCKDHA	593	genome.wustl.edu	37	19	41928955	41928955	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000709.3	+1	reviewed	p.E350*	1.000	60	0%	125	31.2%	46	19.5%	-	-	-	HMMPfam_E1_dh,superfamily_SSF52518
ENSG00000229113	0	genome.wustl.edu	37	19	42027588	42027588	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000439847	-1	known	p.R232Q	0.003	211	0%	337	29.7%	2	0%	-	-	-	NULL
ENSG00000229113	0	genome.wustl.edu	37	19	42028217	42028217	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000439847	-1	known	p.K45N	1.000	112	0%	215	30.2%	0	-	-	-	-	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
CEACAM21	90273	genome.wustl.edu	37	19	42083873	42083873	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098506.1	+1	validated	p.S129Y	0.000	55	0%	117	23.1%	1	0%	benign(0.011)	tolerated(1)	neutral(0.001)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
CEACAM4	1089	genome.wustl.edu	37	19	42132167	42132167	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001817.2	-1	validated	p.L78F	0.000	161	0%	307	34.5%	0	-	benign(0.085)	tolerated(0.67)	neutral(0.009)	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
CEACAM7	1087	genome.wustl.edu	37	19	42181417	42181417	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006890.3	-1	provisional	p.A241S	0.001	227	0%	220	35.9%	0	-	benign(0.004)	tolerated(0.5)	neutral(0.010)	NULL
CEACAM5	1048	genome.wustl.edu	37	19	42219683	42219683	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004363.2	+1	validated	p.V273G	0.902	334	0%	578	36.7%	9	44.4%	possibly_damaging(0.905)	deleterious(0)	deleterious(0.804)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
CEACAM5	1048	genome.wustl.edu	37	19	42223882	42223882	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004363.2	+1	validated	p.N509T	0.000	150	0%	239	27.6%	18	55.5%	possibly_damaging(0.799)	deleterious(0)	deleterious(0.746)	HMMSmart_SM00409,superfamily_Immunoglobulin
CEACAM3	1084	genome.wustl.edu	37	19	42315271	42315271	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001815.2	+1	reviewed	p.S252Y	0.002	111	0%	171	48%	0	-	possibly_damaging(0.578)	deleterious(0)	deleterious(0.643)	NULL
LYPD4	147719	genome.wustl.edu	37	19	42341357	42341357	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173506.4	-1	validated	p.D201Y	0.000	92	0%	232	35.3%	0	-	possibly_damaging(0.538)	tolerated(0.11)	neutral(0.454)	HMMPfam_UPAR_LY6
LYPD4	147719	genome.wustl.edu	37	19	42342207	42342207	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173506.4	-1	validated	p.L114I	0.989	97	0%	227	27.3%	1	0%	probably_damaging(0.991)	tolerated(0.06)	deleterious(0.766)	NULL
ATP1A3	478	genome.wustl.edu	37	19	42471167	42471167	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000441343	-1	known	p.L1083I	0.000	83	0%	185	32.4%	0	-	unknown(0)	-	-	NULL
ATP1A3	478	genome.wustl.edu	37	19	42489469	42489469	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152296.3	-1	reviewed	p.N238S	1.000	63	0%	156	12.2%	0	-	possibly_damaging(0.461)	tolerated(0.22)	neutral(0.193)	HMMPfam_E1-E2_ATPase,superfamily_SSF81653,superfamily_SSF81665
GRIK5	2901	genome.wustl.edu	37	19	42563539	42563539	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002088.3	-1	reviewed	p.D217N	1.000	197	0%	445	31.2%	2	0%	possibly_damaging(0.949)	deleterious(0.01)	deleterious(0.798)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRIK5	2901	genome.wustl.edu	37	19	42566748	42566748	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002088.3	-1	reviewed	p.A134T	1.000	62	0%	97	22.7%	0	-	benign(0.02)	tolerated(0.41)	neutral(0.016)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
ZNF526	116115	genome.wustl.edu	37	19	42728732	42728732	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133444.1	+1	provisional	p.C59*	0.995	85	0%	156	38.5%	13	69.2%	-	-	-	PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CIC	23152	genome.wustl.edu	37	19	42790988	42790988	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015125.3	+1	validated	p.A45T	1.000	44	0%	59	45.8%	14	50%	possibly_damaging(0.636)	tolerated(0.1)	deleterious(0.509)	NULL
PSG3	5671	genome.wustl.edu	37	19	43244503	43244503	+	Missense_Mutation	SNP	G	G	A	rs188987120	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021016.3	-1	validated	p.R12C	0.003	252	0.4%	318	30.8%	0	-	benign(0.003)	tolerated(0.11)	neutral(0.272)	HMMPfam_V-set
PSG8	440533	genome.wustl.edu	37	19	43262241	43262241	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182707.2	-1	validated	p.T208A	0.043	306	0%	375	30.7%	0	-	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726
PSG6	5675	genome.wustl.edu	37	19	43414920	43414920	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002782.3	-1	provisional	p.P173L	0.001	360	0%	472	29.4%	0	-	benign(0)	tolerated(0.21)	neutral(0.044)	HMMPfam_ig,superfamily_SSF48726
PSG11	5680	genome.wustl.edu	37	19	43529203	43529203	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002785.2	-1	validated	p.L24I	0.286	433	0%	649	28.5%	0	-	possibly_damaging(0.928)	deleterious(0)	deleterious(0.820)	HMMPfam_V-set
PSG2	5670	genome.wustl.edu	37	19	43585215	43585215	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031246.2	-1	validated	p.V83A	0.000	461	0%	689	27.6%	0	-	benign(0.021)	tolerated(0.1)	neutral(0.287)	HMMSmart_IG,HMMPfam_V-set,superfamily_SSF48726
PSG4	5672	genome.wustl.edu	37	19	43708205	43708205	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002780.3	-1	validated	p.R88I	0.000	665	0%	1100	20.9%	0	-	benign(0)	tolerated(0.23)	neutral(0.042)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
LYPD3	27076	genome.wustl.edu	37	19	43965982	43965982	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014400.2	-1	validated	p.L188	0.296	56	0%	168	36.9%	67	59.7%	-	-	-	HMMPfam_UPAR_LY6
XRCC1	7515	genome.wustl.edu	37	19	44056382	44056382	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006297.2	-1	reviewed	p.R290Q	0.979	63	0%	101	42.6%	49	42.8%	benign(0.367)	tolerated(0.32)	neutral(0.141)	NULL
XRCC1	7515	genome.wustl.edu	37	19	44058827	44058827	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006297.2	-1	reviewed	p.K129E	1.000	34	0%	58	37.9%	35	34.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_XRCC1_N,superfamily_Galactose-binding domain-like
IRGQ	126298	genome.wustl.edu	37	19	44097444	44097444	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007561.2	-1	validated	p.E202	0.915	9	0.000	12	0.333	15	73.3%	-	-	-	NULL
KCNN4	3783	genome.wustl.edu	37	19	44273178	44273178	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002250.2	-1	reviewed	p.R352	1.000	95	0%	202	26.7%	9	66.6%	-	-	-	HMMPfam_CaMBD,superfamily_Small-conductance potassium channel
LYPD5	284348	genome.wustl.edu	37	19	44303930	44303930	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031749.2	-1	validated	p.L41I	0.998	90	0%	140	30.7%	1	0%	probably_damaging(0.996)	tolerated(0.29)	deleterious(0.491)	superfamily_Snake toxin-like
ZNF283	284349	genome.wustl.edu	37	19	44351258	44351258	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181845.1	+1	validated	p.G169R	0.003	52	0%	76	39.5%	2	0%	benign(0.009)	tolerated(0.66)	neutral(0.003)	NULL
ZNF283	284349	genome.wustl.edu	37	19	44351601	44351601	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181845.1	+1	validated	p.R283I	1.000	85	0%	119	29.4%	2	50%	benign(0.209)	tolerated(0.12)	neutral(0.281)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF404	342908	genome.wustl.edu	37	19	44378032	44378032	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001033719.2	-1	validated	p.F112V	0.009	177	0%	149	23.5%	1	100%	benign(0.077)	tolerated(0.15)	neutral(0.246)	NULL
ZNF221	7638	genome.wustl.edu	37	19	44471482	44471482	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013359.2	+1	validated	p.S610R	0.000	60	0%	85	40%	1	0%	benign(0.01)	-	-	NULL
ZNF155	7711	genome.wustl.edu	37	19	44500677	44500677	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003445.2	+1	validated	p.Q223P	0.947	256	0.8%	275	30.2%	4	0%	probably_damaging(0.988)	deleterious(0.02)	deleterious(0.821)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF223	7766	genome.wustl.edu	37	19	44570500	44570500	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013361.4	+1	validated	p.E173D	0.816	148	0%	286	34.3%	3	66.6%	benign(0.004)	tolerated(0.13)	neutral(0.253)	superfamily_C2H2 and C2HC zinc fingers
ZNF224	7767	genome.wustl.edu	37	19	44605039	44605039	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013398.2	+1	validated	p.R34Q	0.020	279	0%	505	31.7%	8	62.5%	benign(0.024)	tolerated(0.13)	neutral(0.254)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF224	7767	genome.wustl.edu	37	19	44611788	44611788	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013398.2	+1	validated	p.R492I	0.000	142	0%	247	36.8%	4	75%	probably_damaging(0.981)	tolerated(0.18)	deleterious(0.481)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF224	7767	genome.wustl.edu	37	19	44612076	44612076	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013398.2	+1	validated	p.R588I	0.005	128	0%	277	32.5%	13	46.1%	probably_damaging(0.994)	tolerated(0.17)	deleterious(0.511)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF234	10780	genome.wustl.edu	37	19	44661578	44661578	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144824.1	+1	validated	p.R470Q	0.000	138	0%	222	63.5%	6	100%	probably_damaging(0.999)	tolerated(0.58)	deleterious(0.495)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF227	7770	genome.wustl.edu	37	19	44721987	44721987	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182490.1	+1	provisional	p.E14	0.671	173	0%	285	33%	4	25%	-	-	-	NULL
ZNF227	7770	genome.wustl.edu	37	19	44740399	44740399	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182490.1	+1	provisional	p.C606G	0.985	91	0%	182	33.5%	10	60%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF233	353355	genome.wustl.edu	37	19	44777281	44777281	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181756.1	+1	provisional	p.N156K	0.000	73	0%	90	31.1%	1	100%	possibly_damaging(0.475)	tolerated(0.08)	neutral(0.457)	NULL
ZNF235	9310	genome.wustl.edu	37	19	44791371	44791371	+	Nonstop_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004234.4	-1	reviewed	p.*739Y	0.000	170	0%	175	31.4%	3	100%	-	-	-	NULL
ZNF235	9310	genome.wustl.edu	37	19	44792608	44792608	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004234.4	-1	reviewed	p.G327D	0.653	167	0%	248	35.9%	3	33.3%	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF285	26974	genome.wustl.edu	37	19	44891427	44891427	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152354.3	-1	validated	p.R327H	0.000	211	0%	268	37.3%	0	-	possibly_damaging(0.755)	tolerated(0.55)	neutral(0.286)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF285	26974	genome.wustl.edu	37	19	44891606	44891606	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152354.3	-1	validated	p.K267N	0.003	39	0%	52	36.5%	1	0%	benign(0.079)	deleterious(0.02)	neutral(0.389)	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF229	7772	genome.wustl.edu	37	19	44932495	44932495	+	Missense_Mutation	SNP	C	C	T	rs147313651	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014518.2	-1	validated	p.E821K	0.856	173	0%	201	29.4%	0	-	benign(0)	tolerated(0.2)	neutral(0.049)	superfamily_C2H2 and C2HC zinc fingers
ZNF180	7733	genome.wustl.edu	37	19	44980824	44980824	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013256.3	-1	validated	p.R625I	0.994	183	0%	223	31.8%	12	50%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF180	7733	genome.wustl.edu	37	19	44980992	44980992	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013256.3	-1	validated	p.R569I	1.000	208	0%	213	32.9%	11	45.4%	probably_damaging(1)	tolerated(0.19)	deleterious(0.549)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
CBLC	23624	genome.wustl.edu	37	19	45287546	45287546	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012116.3	+1	validated	p.R269C	1.000	109	0%	274	42.7%	7	42.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cbl_N3,superfamily_SH2 domain
GEMIN7	79760	genome.wustl.edu	37	19	45593658	45593658	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007269.1	+1	reviewed	p.D96N	0.998	33	0%	45	26.7%	41	39%	benign(0.332)	tolerated(0.16)	neutral(0.163)	NULL
ERCC2	2068	genome.wustl.edu	37	19	45855848	45855848	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000400.3	-1	reviewed	p.F654	0.169	29	0%	49	36.7%	40	35%	-	-	-	HMMSmart_HELICc2
PPP1R13L	10848	genome.wustl.edu	37	19	45888880	45888880	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142502.1	-1	validated	p.A730T	1.000	25	0%	13	38.5%	135	56.2%	unknown(0)	deleterious(0)	-	superfamily_Ankyrin repeat
DMPK	1760	genome.wustl.edu	37	19	46283068	46283068	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001081563.1	-1	reviewed	p.L84M	0.999	50	0%	81	29.6%	12	33.3%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
CCDC61	729440	genome.wustl.edu	37	19	46519649	46519649	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080402.1	+1	provisional	p.M382I	1.000	79	0%	113	30.1%	3	66.6%	possibly_damaging(0.741)	tolerated(0.33)	neutral(0.296)	NULL
IGFL3	388555	genome.wustl.edu	37	19	46627236	46627236	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207393.1	-1	validated	p.S86Y	0.002	95	0%	103	33%	0	-	benign(0.094)	tolerated(0.37)	neutral(0.026)	NULL
IGFL1	374918	genome.wustl.edu	37	19	46733744	46733744	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198541.1	+1	provisional	p.A98V	0.000	52	0%	57	26.3%	12	66.6%	possibly_damaging(0.796)	deleterious(0)	deleterious(0.744)	NULL
PPP5C	5536	genome.wustl.edu	37	19	46887100	46887100	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006247.2	+1	provisional	p.E255K	0.999	124	0.8%	170	32.4%	62	32.2%	benign(0.001)	tolerated(0.8)	neutral(0.001)	HMMPfam_Metallophos,HMMSmart_SM00156,superfamily_Metallo-dependent phosphatases
CCDC8	83987	genome.wustl.edu	37	19	46915816	46915816	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032040.3	-1	validated	p.Q84H	0.992	44	0%	70	10%	66	4.5%	probably_damaging(0.965)	deleterious(0.01)	deleterious(0.812)	NULL
ENSG00000248985	0	genome.wustl.edu	37	19	46971572	46971572	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000503237	+1	novel	NULL	0.001	17	0%	39	28.2%	0	-	-	-	-	-
PNMAL1	55228	genome.wustl.edu	37	19	46973122	46973122	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018215.3	-1	validated	p.K391E	0.995	85	0%	124	37.9%	2	50%	possibly_damaging(0.5)	deleterious(0)	deleterious(0.612)	NULL
ENSG00000230510	0	genome.wustl.edu	37	19	47028928	47028928	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000414155	-1	known	p.A114T	1.000	40	0%	86	30.2%	1	0%	probably_damaging(0.993)	deleterious(0.01)	deleterious(0.856)	HMMPfam_PPP5
FKRP	79147	genome.wustl.edu	37	19	47258875	47258875	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039885.2	+1	reviewed	p.F56	0.999	36	0%	30	43.3%	8	25%	-	-	-	NULL
ARHGAP35	2909	genome.wustl.edu	37	19	47422931	47422931	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004491.4	+1	reviewed	p.I333	0.722	30	0%	59	28.8%	9	33.3%	-	-	-	NULL
ZC3H4	23211	genome.wustl.edu	37	19	47572493	47572493	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015168.1	-1	validated	p.P752S	1.000	48	0%	59	47.5%	10	10%	possibly_damaging(0.797)	tolerated(0.44)	neutral(0.312)	NULL
SAE1	10055	genome.wustl.edu	37	19	47634280	47634280	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000270225	+1	known	p.Q31H	1.000	27	0%	56	39.3%	66	43.9%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Activating enzymes of the ubiquitin-like proteins
C5AR1	728	genome.wustl.edu	37	19	47823431	47823431	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001736.3	+1	validated	p.D133N	1.000	54	0%	108	35.2%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_Family A G protein-coupled receptor-like
MEIS3	56917	genome.wustl.edu	37	19	47912805	47912805	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020160.1	-1	validated	e7-1	1.000	62	0%	81	34.6%	0	-	-	-	-	-
NAPA	8775	genome.wustl.edu	37	19	48018114	48018114	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003827.2	-1	reviewed	p.F28L	1.000	40	0%	68	25%	144	36.8%	benign(0.002)	tolerated(0.63)	neutral(0.004)	superfamily_TPR-like
ZNF541	84215	genome.wustl.edu	37	19	48024611	48024611	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001101419.1	-1	validated	p.R1323Q	0.998	139	0%	194	34%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF541	84215	genome.wustl.edu	37	19	48043055	48043055	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001101419.1	-1	validated	p.K901N	0.875	59	0%	152	30.9%	0	-	benign(0.372)	tolerated(0.07)	neutral(0.438)	NULL
GLTSCR1	29998	genome.wustl.edu	37	19	48197901	48197901	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015711.3	+1	provisional	p.P938L	0.695	16	0%	34	23.5%	2	50%	possibly_damaging(0.922)	tolerated(0.08)	deleterious(0.671)	NULL
EHD2	30846	genome.wustl.edu	37	19	48229328	48229328	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014601.3	+1	reviewed	p.I254	1.000	21	0%	36	36.1%	28	10.7%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
EHD2	30846	genome.wustl.edu	37	19	48239625	48239625	+	Splice_Site	SNP	G	G	T	rs111648404	byCluster	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014601.3	+1	reviewed	e4-1	1.000	67	0%	119	26.9%	0	-	-	-	-	-
BSPH1	100131137	genome.wustl.edu	37	19	48495320	48495320	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128326.2	-1	validated	p.L7I	0.000	80	0%	170	35.9%	0	-	possibly_damaging(0.873)	-	-	NULL
PLA2G4C	8605	genome.wustl.edu	37	19	48565258	48565258	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003706.2	-1	reviewed	p.F418	0.823	43	0%	101	30.7%	2	0%	-	-	-	HMMSmart_PLAc,superfamily_Acyl_Trfase/lysoPlipase
PLA2G4C	8605	genome.wustl.edu	37	19	48598787	48598787	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003706.2	-1	reviewed	p.G215R	0.841	86	0%	193	28%	4	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PLA2_B,HMMSmart_PLAc,superfamily_Acyl_Trfase/lysoPlipase
LIG1	3978	genome.wustl.edu	37	19	48631212	48631212	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000234.1	-1	reviewed	p.K629N	1.000	181	0%	287	35.9%	54	35.1%	benign(0.003)	tolerated(0.26)	neutral(0.034)	HMMPfam_DNA_ligase_A_M,superfamily_DNA ligase/mRNA capping enzyme catalytic domain
KCNJ14	3770	genome.wustl.edu	37	19	48967726	48967726	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013348.2	+1	reviewed	p.L335I	1.000	110	0%	190	36.3%	3	33.3%	benign(0.015)	tolerated(0.2)	neutral(0.050)	HMMPfam_IRK,superfamily_Ig_E-set
CYTH2	9266	genome.wustl.edu	37	19	48978114	48978114	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017457.4	+1	reviewed	p.R239Q	0.987	135	0%	201	31.3%	128	39%	benign(0.067)	deleterious(0.03)	neutral(0.369)	HMMPfam_Sec7,HMMSmart_SM00222,superfamily_Sec7 domain
SULT2B1	6820	genome.wustl.edu	37	19	49102445	49102445	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177973.1	+1	reviewed	p.D294N	0.989	22	0%	18	33.3%	15	40%	possibly_damaging(0.924)	tolerated(0.08)	deleterious(0.673)	HMMPfam_Sulfotransfer_1,superfamily_P-loop containing nucleoside triphosphate hydrolases
NTN5	126147	genome.wustl.edu	37	19	49166744	49166744	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145807.1	-1	provisional	p.R361W	0.007	97	0%	160	35%	6	83.3%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	superfamily_TIMP-like,HMMPfam_NTR,HMMSmart_SM00643
MAMSTR	284358	genome.wustl.edu	37	19	49216577	49216577	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130915.1	-1	validated	p.L399V	1.000	20	0%	31	41.9%	6	33.3%	unknown(0)	deleterious(0)	-	NULL
NUCB1	4924	genome.wustl.edu	37	19	49416428	49416428	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006184.5	+1	reviewed	p.R214H	1.000	87	0%	193	32.6%	497	41.6%	probably_damaging(0.981)	deleterious(0.02)	deleterious(0.808)	NULL
DHDH	27294	genome.wustl.edu	37	19	49447675	49447675	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014475.3	+1	reviewed	p.P269L	0.838	37	0%	87	33.3%	0	-	possibly_damaging(0.794)	deleterious(0.05)	deleterious(0.643)	superfamily_SSF55347
CGB5	93659	genome.wustl.edu	37	19	49548360	49548360	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033043.1	+1	reviewed	p.A103T	1.000	102	0%	189	22.2%	0	-	benign(0.186)	deleterious(0)	neutral(0.462)	HMMSmart_SM00068,HMMPfam_Cys_knot,PatternScan_GLYCO_HORMONE_BETA_2,superfamily_Cystine-knot cytokines
NTF4	4909	genome.wustl.edu	37	19	49564674	49564674	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006179.4	-1	reviewed	p.R194Q	1.000	34	0%	20	20%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	HMMPfam_NGF,HMMSmart_NGF,superfamily_SSF57501
SNRNP70	6625	genome.wustl.edu	37	19	49604717	49604717	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003089.4	+1	validated	p.R155Q	1.000	36	0%	63	42.9%	287	35.5%	probably_damaging(0.998)	deleterious(0.03)	deleterious(0.839)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
TRPM4	54795	genome.wustl.edu	37	19	49714028	49714028	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017636.2	+1	provisional	p.E1130D	1.000	16	0%	29	37.9%	53	49%	probably_damaging(1)	tolerated(0.1)	deleterious(0.786)	NULL
TEAD2	8463	genome.wustl.edu	37	19	49862699	49862699	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003598.1	-1	provisional	p.R97Q	1.000	155	1.3%	266	35%	74	31%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TEA,HMMSmart_TEA,PatternScan_TEA_1
RRAS	6237	genome.wustl.edu	37	19	50139911	50139911	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006270.3	-1	provisional	p.V140F	0.997	48	0%	89	25.8%	91	23%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00176,HMMSmart_SM00173,HMMSmart_SM00174,HMMSmart_SM00175,HMMPfam_Ras,superfamily_P-loop containing nucleoside triphosphate hydrolases
CPT1C	126129	genome.wustl.edu	37	19	50208311	50208311	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152359.1	+1	provisional	p.G273	0.224	50	0%	82	31.7%	5	0%	-	-	-	HMMPfam_Carn_acyltransf,superfamily_CoA-dependent acyltransferases
CPT1C	126129	genome.wustl.edu	37	19	50216854	50216854	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152359.1	+1	provisional	p.D802N	0.000	32	0%	64	25%	11	0%	benign(0)	tolerated(1)	-	NULL
TSKS	60385	genome.wustl.edu	37	19	50247576	50247576	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021733.1	-1	reviewed	p.G425R	1.000	52	0%	84	28.6%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
NUP62	23636	genome.wustl.edu	37	19	50411745	50411745	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012346.3	-1	reviewed	p.I440	0.994	180	0%	294	38.1%	60	40%	-	-	-	NULL
SIGLEC16	400709	genome.wustl.edu	37	19	50474962	50474962	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000417280	+1	known	p.N366D	0.059	149	0%	261	22.2%	1	0%	probably_damaging(1)	tolerated(0.4)	deleterious(0.516)	superfamily_Immunoglobulin
MYH14	79784	genome.wustl.edu	37	19	50789902	50789902	+	Missense_Mutation	SNP	G	G	A	rs150029590	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077186.1	+1	reviewed	p.R1535Q	1.000	31	0%	52	46.2%	40	37.5%	probably_damaging(0.993)	tolerated(0.71)	neutral(0.452)	HMMPfam_Myosin_tail_1,superfamily_Prefoldin
SPIB	6689	genome.wustl.edu	37	19	50926118	50926118	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003121.3	+1	validated	p.A55T	0.004	29	0%	43	25.6%	1	0%	benign(0.147)	tolerated(0.4)	neutral(0.029)	NULL
MYBPC2	4606	genome.wustl.edu	37	19	50961923	50961923	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004533.3	+1	validated	p.R806S	0.985	28	0%	35	40%	2	0%	benign(0.34)	deleterious(0.02)	deleterious(0.490)	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like
ASPDH	554235	genome.wustl.edu	37	19	51015427	51015427	+	Silent	SNP	G	G	A	rs184745585	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001114598.1	-1	validated	p.S258	0.935	16	0%	32	53.1%	0	-	-	-	-	HMMPfam_DUF108
SYT3	84258	genome.wustl.edu	37	19	51133284	51133284	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032298.2	-1	validated	p.E273	1.000	66	0%	84	35.7%	0	-	-	-	-	NULL
GPR32	2854	genome.wustl.edu	37	19	51274119	51274119	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001506.1	+1	provisional	p.D88N	1.000	174	0%	475	35.2%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_SSF81321
LOC390956	390956	genome.wustl.edu	37	19	51430665	51430665	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_372741.4	-1	model	p.R77K	1.000	20	0%	33	21.2%	105	0%	-	-	-	HMMPfam_Pro_isomerase,PatternScan_CSA_PPIASE_1,superfamily_Cyclophilin-like
KLK10	5655	genome.wustl.edu	37	19	51518158	51518158	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077500.1	-1	reviewed	p.L243	0.777	101	0%	163	35%	2	100%	-	-	-	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
KLK13	26085	genome.wustl.edu	37	19	51563229	51563229	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015596.1	-1	reviewed	p.H121N	1.000	93	0%	187	32.6%	0	-	possibly_damaging(0.746)	tolerated(0.16)	neutral(0.334)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
SIGLEC7	27036	genome.wustl.edu	37	19	51647721	51647721	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014385.2	+1	validated	p.Q164H	0.011	162	0%	201	39.8%	1	0%	possibly_damaging(0.604)	tolerated(0.13)	neutral(0.462)	HMMSmart_SM00409,HMMPfam_C2-set_2,superfamily_Immunoglobulin
SIGLEC7	27036	genome.wustl.edu	37	19	51648175	51648175	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014385.2	+1	validated	p.P240H	0.021	133	0%	124	13.7%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Immunoglobulin
SIGLEC7	27036	genome.wustl.edu	37	19	51656400	51656400	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014385.2	+1	validated	p.E434D	0.002	98	0%	171	41.5%	3	0%	possibly_damaging(0.861)	deleterious(0)	deleterious(0.778)	NULL
SIGLEC8	27181	genome.wustl.edu	37	19	51958912	51958912	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014442.2	-1	validated	p.L271I	0.025	84	0%	107	29%	0	-	probably_damaging(0.966)	tolerated(0.2)	neutral(0.457)	HMMSmart_SM00409,superfamily_Immunoglobulin
SIGLEC8	27181	genome.wustl.edu	37	19	51961515	51961515	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014442.2	-1	validated	p.V43L	0.009	152	0%	268	35.4%	0	-	possibly_damaging(0.806)	tolerated(0.1)	deleterious(0.590)	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
CEACAM18	729767	genome.wustl.edu	37	19	51984898	51984898	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080405.1	+1	provisional	p.R279C	0.000	151	0%	220	33.2%	0	-	possibly_damaging(0.92)	deleterious(0.02)	deleterious(0.754)	HMMSmart_SM00409,superfamily_Immunoglobulin
SIGLEC12	89858	genome.wustl.edu	37	19	52003562	52003562	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033329.1	-1	reviewed	p.F22L	0.001	77	0%	91	38.5%	0	-	-	-	-	NULL
SIGLEC12	89858	genome.wustl.edu	37	19	52004758	52004758	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053003.2	-1	reviewed	p.A77V	0.770	123	0%	162	27.8%	1	0%	possibly_damaging(0.891)	deleterious(0)	deleterious(0.795)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
SIGLEC14	100049587	genome.wustl.edu	37	19	52147047	52147047	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098612.1	-1	validated	p.I333V	0.226	65	0%	110	32.7%	2	0%	benign(0.001)	tolerated(0.13)	neutral(0.253)	superfamily_SSF48726
ZNF577	84765	genome.wustl.edu	37	19	52376124	52376124	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032679.2	-1	validated	p.E373D	0.881	67	0%	102	27.5%	3	33.3%	benign(0.014)	deleterious(0)	neutral(0.445)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF649	65251	genome.wustl.edu	37	19	52394568	52394568	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023074.3	-1	validated	p.K274T	0.000	181	0%	322	31.4%	17	70.5%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF615	284370	genome.wustl.edu	37	19	52496175	52496175	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198480.2	-1	provisional	p.A718	0.001	214	0%	293	21.2%	9	11.1%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF615	284370	genome.wustl.edu	37	19	52505083	52505083	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198480.2	-1	provisional	p.Y74C	0.000	261	0%	382	32.5%	2	0%	possibly_damaging(0.66)	tolerated(0.17)	neutral(0.292)	NULL
ZNF432	9668	genome.wustl.edu	37	19	52538418	52538418	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014650.2	-1	provisional	p.E172*	0.000	125	0%	186	31.2%	4	75%	-	-	-	NULL
ZNF841	284371	genome.wustl.edu	37	19	52569250	52569250	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136499.1	-1	validated	p.E629K	0.307	135	0%	286	31.1%	13	53.8%	possibly_damaging(0.88)	tolerated(0.09)	deleterious(0.639)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF616	90317	genome.wustl.edu	37	19	52619047	52619047	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178523.3	-1	validated	p.R457K	0.000	221	0%	296	29.7%	1	0%	benign(0.133)	tolerated(0.28)	neutral(0.042)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF616	90317	genome.wustl.edu	37	19	52619551	52619551	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178523.3	-1	validated	p.R289I	0.437	119	0%	161	32.9%	4	50%	probably_damaging(0.992)	tolerated(0.18)	deleterious(0.504)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF616	90317	genome.wustl.edu	37	19	52620083	52620083	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178523.3	-1	validated	p.P112S	0.000	326	0%	519	34.3%	2	0%	benign(0.427)	tolerated(0.67)	neutral(0.142)	NULL
ZNF836	162962	genome.wustl.edu	37	19	52658375	52658375	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001102657.1	-1	provisional	p.R854I	0.001	179	0%	293	35.5%	9	33.3%	probably_damaging(1)	tolerated(0.22)	deleterious(0.542)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
PPP2R1A	5518	genome.wustl.edu	37	19	52705200	52705200	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014225.5	+1	reviewed	p.R28C	0.995	95	0%	147	38.1%	167	46.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM repeat
ZNF766	90321	genome.wustl.edu	37	19	52793402	52793402	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010851.2	+1	validated	p.E120*	0.000	90	0%	225	32.4%	5	60%	-	-	-	NULL
ZNF766	90321	genome.wustl.edu	37	19	52794016	52794016	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010851.2	+1	validated	p.E324D	1.000	75	0%	106	43.4%	13	23%	possibly_damaging(0.906)	deleterious(0.02)	deleterious(0.742)	superfamily_C2H2 and C2HC zinc fingers
ZNF480	147657	genome.wustl.edu	37	19	52825722	52825722	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144684.2	+1	validated	p.V407L	0.000	73	0%	123	36.6%	1	0%	possibly_damaging(0.882)	deleterious(0.02)	deleterious(0.728)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF610	162963	genome.wustl.edu	37	19	52869134	52869134	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173530.2	+1	validated	p.S168Y	0.018	43	0%	97	33%	4	25%	benign(0.001)	tolerated(1)	-	NULL
ZNF880	400713	genome.wustl.edu	37	19	52887116	52887116	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145434.1	+1	validated	p.L95V	0.000	75	0%	132	25%	11	45.4%	benign(0.004)	tolerated(0.45)	neutral(0.012)	NULL
ZNF528	84436	genome.wustl.edu	37	19	52918803	52918803	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032423.2	+1	validated	p.R233I	0.000	113	0%	218	29.8%	1	0%	possibly_damaging(0.714)	tolerated(0.19)	neutral(0.307)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF528	84436	genome.wustl.edu	37	19	52919387	52919387	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032423.2	+1	validated	p.R428*	0.000	112	0%	226	28.8%	2	50%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF534	147658	genome.wustl.edu	37	19	52941178	52941178	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143939.1	+1	validated	p.V168	0.019	144	0%	202	34.7%	0	-	-	-	-	superfamily_SSF57667
ZNF534	147658	genome.wustl.edu	37	19	52942303	52942303	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143939.1	+1	validated	p.V543	0.021	124	0%	232	28.9%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF578	147660	genome.wustl.edu	37	19	53015310	53015310	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099694.1	+1	validated	p.R559I	1.000	82	0%	138	24.6%	0	-	probably_damaging(0.991)	tolerated(0.29)	deleterious(0.473)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ENSG00000248326	0	genome.wustl.edu	37	19	53016104	53016104	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000502966	-1	novel	NULL	0.008	19	0%	53	45.3%	3	0%	-	-	-	-
ZNF600	162966	genome.wustl.edu	37	19	53270128	53270128	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198457.2	-1	validated	p.R294I	0.994	129	0%	219	37.4%	2	50%	benign(0.047)	tolerated(0.21)	neutral(0.047)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF600	162966	genome.wustl.edu	37	19	53270577	53270577	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198457.2	-1	validated	p.P144	0.002	253	0%	396	32.8%	2	0%	-	-	-	NULL
ENSG00000245932	0	genome.wustl.edu	37	19	53302212	53302212	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000500436	+1	known	NULL	0.000	94	0%	151	25.2%	8	75%	-	-	-	-
ENSG00000245932	0	genome.wustl.edu	37	19	53302762	53302762	+	RNA	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000500436	+1	known	NULL	0.064	114	0%	171	35.7%	2	0%	-	-	-	-
ZNF28	7576	genome.wustl.edu	37	19	53311356	53311356	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000360272	-1	known	p.E16*	0.879	264	0%	543	38.1%	1	0%	-	-	-	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF816	125893	genome.wustl.edu	37	19	53454671	53454671	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031665.1	-1	validated	p.E119D	0.000	187	0%	350	34.6%	5	60%	probably_damaging(0.957)	tolerated(0.47)	neutral(0.412)	NULL
ZNF415	55786	genome.wustl.edu	37	19	53619657	53619657	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018355.2	-1	validated	p.F15L	0.052	187	0%	235	35.3%	3	33.3%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
ZNF818P	390963	genome.wustl.edu	37	19	53716415	53716415	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000344759	+1	known	p.K59N	0.941	12	0%	12	41.7%	2	0%	-	-	-	NULL
ZNF677	342926	genome.wustl.edu	37	19	53741069	53741069	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182609.2	-1	provisional	p.S304L	0.000	157	0%	272	33.8%	0	-	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF677	342926	genome.wustl.edu	37	19	53741551	53741551	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182609.2	-1	provisional	p.F143L	0.019	365	0%	570	34.9%	0	-	benign(0.004)	tolerated(1)	-	NULL
VN1R2	317701	genome.wustl.edu	37	19	53762056	53762056	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173856.2	+1	validated	p.R143I	0.046	150	0%	156	29.5%	0	-	benign(0.026)	deleterious(0.02)	neutral(0.384)	superfamily_SSF81321
ZNF845	91664	genome.wustl.edu	37	19	53854163	53854163	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138374.1	+1	validated	p.R79C	0.000	138	0%	263	31.2%	1	0%	probably_damaging(0.991)	tolerated(0.18)	deleterious(0.500)	NULL
ZNF525	170958	genome.wustl.edu	37	19	53884527	53884527	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000474037	+1	known	p.K232T	0.005	126	0%	131	32.8%	0	-	probably_damaging(0.971)	tolerated(0.42)	neutral(0.427)	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF765	91661	genome.wustl.edu	37	19	53911569	53911569	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040185.1	+1	provisional	p.S254L	0.000	118	0%	245	32.7%	2	100%	benign(0)	tolerated(0.1)	neutral(0.286)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF765	91661	genome.wustl.edu	37	19	53911761	53911761	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040185.1	+1	provisional	p.R318M	0.023	96	0%	137	24.8%	0	-	possibly_damaging(0.76)	deleterious(0.01)	deleterious(0.687)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF813	126017	genome.wustl.edu	37	19	53993988	53993988	+	Missense_Mutation	SNP	A	A	G	rs56187530		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004301.3	+1	validated	p.I168V	0.000	63	0%	205	41.5%	0	-	benign(0.001)	tolerated(0.91)	-	NULL
MIR515-2	574465	genome.wustl.edu	37	19	54188336	54188336	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000384883	+1	known	NULL	0.013	218	0%	456	30%	0	-	-	-	-	-
MIR520B	574473	genome.wustl.edu	37	19	54204520	54204520	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000384989	+1	known	NULL	0.160	82	0%	198	37.4%	0	-	-	-	-	-
MIR519D	574480	genome.wustl.edu	37	19	54216635	54216635	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000385246	+1	known	NULL	0.016	180	0%	361	34.6%	0	-	-	-	-	-
MIR516A1	574498	genome.wustl.edu	37	19	54260045	54260045	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000385033	+1	known	NULL	0.288	115	0%	259	28.2%	0	-	-	-	-	-
NLRP12	91662	genome.wustl.edu	37	19	54314361	54314361	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144687.2	-1	reviewed	p.A184	0.000	48	0%	75	36%	0	-	-	-	-	NULL
NLRP12	91662	genome.wustl.edu	37	19	54327374	54327374	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144687.2	-1	reviewed	p.E19*	0.977	45	0%	65	43.1%	0	-	-	-	-	HMMPfam_PAAD_DAPIN,superfamily_DEATH domain
PRPF31	26121	genome.wustl.edu	37	19	54631562	54631562	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015629.3	+1	reviewed	p.R354*	1.000	21	0%	29	24.1%	48	4.1%	-	-	-	HMMPfam_Prp31_C
LILRB5	10990	genome.wustl.edu	37	19	54760075	54760075	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001081442.1	-1	reviewed	p.L162	0.000	99	0%	134	29.9%	0	-	-	-	-	HMMSmart_SM00409,superfamily_Immunoglobulin
LILRB5	10990	genome.wustl.edu	37	19	54760399	54760399	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001081442.1	-1	reviewed	p.P103H	0.000	128	0%	170	41.2%	0	-	benign(0.072)	tolerated(0.08)	neutral(0.305)	HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Immunoglobulin
LILRA3	11026	genome.wustl.edu	37	19	54802042	54802042	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006865.3	-1	validated	p.F382L	0.001	145	0%	184	23.9%	1	0%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	HMMSmart_IG,HMMPfam_ig,superfamily_SSF48726
LILRA3	11026	genome.wustl.edu	37	19	54804212	54804212	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000391745	-1	known	p.L5F	0.000	258	0%	345	35.9%	0	-	probably_damaging(0.968)	deleterious(0)	deleterious(0.855)	NULL
KIR3DX1	90011	genome.wustl.edu	37	19	55044295	55044295	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000335056	+1	known	p.A23V	0.000	129	0%	176	33%	0	-	benign(0)	tolerated(1)	-	NULL
LILRA2	11027	genome.wustl.edu	37	19	55086771	55086771	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130917.1	+1	validated	p.A235V	0.007	261	0%	277	36.8%	1	0%	benign(0.041)	tolerated(0.15)	neutral(0.243)	HMMSmart_SM00408,HMMSmart_SM00409,superfamily_Immunoglobulin
KIR2DL3	3804	genome.wustl.edu	37	19	55255310	55255310	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015868.2	+1	reviewed	p.T146	0.010	196	0%	267	35.6%	0	-	-	-	-	HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
KIR2DS4	3809	genome.wustl.edu	37	19	55346538	55346538	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000339924	+1	known	p.F13L	0.498	525	0%	871	31%	0	-	benign(0.31)	deleterious(0.02)	deleterious(0.480)	NULL
KIR2DS4	3809	genome.wustl.edu	37	19	55349268	55349268	+	Missense_Mutation	SNP	C	C	A	rs10406301	byCluster;byFrequency	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000339924	+1	known	p.S103Y	0.004	500	0.2%	791	32.5%	0	-	possibly_damaging(0.829)	deleterious(0)	deleterious(0.759)	superfamily_Immunoglobulin
NLRP7	199713	genome.wustl.edu	37	19	55445014	55445014	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127255.1	-1	reviewed	p.K855N	0.222	202	0%	400	35.2%	0	-	benign(0.011)	tolerated(0.89)	neutral(0.001)	HMMSmart_SM00368,superfamily_RNI-like
NLRP7	199713	genome.wustl.edu	37	19	55451447	55451447	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001127255.1	-1	reviewed	p.R247I	0.001	98	0%	193	32.1%	0	-	probably_damaging(0.99)	deleterious(0.03)	deleterious(0.806)	HMMPfam_NACHT,superfamily_P-loop containing nucleoside triphosphate hydrolases
NLRP2	55655	genome.wustl.edu	37	19	55481633	55481633	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017852.3	+1	validated	p.L84M	0.070	70	0%	176	30.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PAAD_DAPIN,superfamily_DEATH domain
NLRP2	55655	genome.wustl.edu	37	19	55494485	55494485	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017852.3	+1	validated	p.L473	0.000	16	0%	34	47.1%	0	-	-	-	-	NULL
NLRP2	55655	genome.wustl.edu	37	19	55496511	55496511	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017852.3	+1	validated	p.S709	0.035	151	0%	387	35.7%	0	-	-	-	-	superfamily_RNI-like
PPP1R12C	54776	genome.wustl.edu	37	19	55603227	55603227	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017607.2	-1	provisional	p.F737	0.930	18	0%	34	38.2%	87	36.7%	-	-	-	NULL
TNNI3	7137	genome.wustl.edu	37	19	55665425	55665425	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000363.4	-1	reviewed	p.K174N	1.000	42	0%	48	33.3%	13	53.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Troponin
TNNI3	7137	genome.wustl.edu	37	19	55665459	55665459	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000363.4	-1	reviewed	p.A163D	1.000	50	0%	48	43.8%	12	33.3%	benign(0.352)	tolerated(0.13)	neutral(0.364)	HMMPfam_Troponin
BRSK1	84446	genome.wustl.edu	37	19	55805753	55805753	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032430.1	+1	validated	p.F222	0.820	160	0%	287	25.1%	0	-	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
FAM71E2	284418	genome.wustl.edu	37	19	55872370	55872370	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145402.1	-1	predicted	p.K252N	0.001	96	0%	192	31.2%	0	-	benign(0.025)	tolerated(0.35)	neutral(0.022)	NULL
SSC5D	284297	genome.wustl.edu	37	19	56011672	56011672	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144950.1	+1	provisional	p.S732I	0.000	34	0%	54	27.8%	11	0%	benign(0.189)	tolerated(0.1)	neutral(0.304)	NULL
SSC5D	284297	genome.wustl.edu	37	19	56011871	56011871	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144950.1	+1	provisional	p.R773C	0.879	34	0%	75	29.3%	15	6.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00202,superfamily_SRCR-like
SBK2	646643	genome.wustl.edu	37	19	56042528	56042528	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001101401.1	-1	provisional	p.M146I	0.927	34	0%	58	39.7%	0	-	benign(0)	tolerated(0.51)	neutral(0.009)	superfamily_Kinase_like,HMMPfam_Pkinase
NLRP9	338321	genome.wustl.edu	37	19	56223873	56223873	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176820.2	-1	reviewed	p.K862T	0.711	110	0%	217	32.3%	0	-	probably_damaging(1)	tolerated(0.15)	deleterious(0.741)	HMMSmart_SM00368,superfamily_RNI-like
NLRP9	338321	genome.wustl.edu	37	19	56243861	56243861	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176820.2	-1	reviewed	p.L446M	0.000	70	0%	163	32.5%	0	-	benign(0.003)	tolerated(0.11)	neutral(0.272)	NULL
RFPL4A	342931	genome.wustl.edu	37	19	56274265	56274265	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145014.1	+1	validated	p.V196	0.001	343	0%	493	12.8%	0	-	-	-	-	HMMPfam_SPRY,HMMSmart_SPRY
RFPL4A	342931	genome.wustl.edu	37	19	56274406	56274406	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145014.1	+1	validated	p.E243	0.000	478	0%	672	13.7%	0	-	-	-	-	HMMPfam_SPRY,HMMSmart_SPRY
ENSG00000229292	0	genome.wustl.edu	37	19	56283982	56283982	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000341750	+1	known	p.D101N	0.393	107	0%	198	27.3%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_SM00589
ENSG00000229292	0	genome.wustl.edu	37	19	56284269	56284269	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000341750	+1	known	p.V196	0.000	270	0%	345	18.3%	0	-	-	-	-	HMMPfam_SPRY,HMMSmart_SM00449
NLRP11	204801	genome.wustl.edu	37	19	56297125	56297125	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145007.3	-1	validated	p.E990*	0.104	128	0%	149	32.9%	1	0%	-	-	-	NULL
NLRP11	204801	genome.wustl.edu	37	19	56300193	56300193	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145007.3	-1	validated	p.D945E	0.000	148	0%	313	31.6%	0	-	benign(0)	tolerated(1)	-	superfamily_RNI-like
NLRP11	204801	genome.wustl.edu	37	19	56329464	56329464	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145007.3	-1	validated	p.F26C	0.003	150	0%	248	35.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PAAD_DAPIN,superfamily_DEATH domain
NLRP4	147945	genome.wustl.edu	37	19	56363528	56363528	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_134444.4	+1	validated	p.E28*	0.482	66	0%	148	36.5%	0	-	-	-	-	HMMPfam_PAAD_DAPIN,superfamily_DEATH domain
NLRP4	147945	genome.wustl.edu	37	19	56369333	56369333	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_134444.4	+1	validated	p.E192*	0.493	63	0%	111	36.9%	0	-	-	-	-	HMMPfam_NACHT,superfamily_P-loop containing nucleoside triphosphate hydrolases
NLRP4	147945	genome.wustl.edu	37	19	56369611	56369611	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_134444.4	+1	validated	p.P284	0.000	93	0%	176	35.2%	0	-	-	-	-	HMMPfam_NACHT
NLRP4	147945	genome.wustl.edu	37	19	56370299	56370299	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_134444.4	+1	validated	p.K514Q	0.000	160	0%	255	38.8%	0	-	benign(0.043)	tolerated(0.32)	neutral(0.026)	NULL
NLRP4	147945	genome.wustl.edu	37	19	56392843	56392843	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_134444.4	+1	validated	p.K959Q	0.000	68	0%	72	30.6%	0	-	probably_damaging(0.991)	tolerated(0.34)	neutral(0.467)	superfamily_RNI-like
NLRP13	126204	genome.wustl.edu	37	19	56443422	56443422	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176810.2	-1	validated	p.L86I	0.008	58	0%	104	28.8%	0	-	benign(0.061)	deleterious(0.03)	neutral(0.368)	HMMPfam_PAAD_DAPIN,superfamily_DEATH_like
NLRP13	126204	genome.wustl.edu	37	19	56443480	56443480	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176810.2	-1	validated	p.L66F	0.000	47	0%	98	26.5%	0	-	benign(0)	tolerated(0.08)	neutral(0.300)	HMMPfam_PAAD_DAPIN,superfamily_DEATH_like
NLRP13	126204	genome.wustl.edu	37	19	56443488	56443488	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176810.2	-1	validated	p.D64N	0.000	45	0%	90	31.1%	0	-	benign(0.227)	tolerated(0.84)	neutral(0.023)	HMMPfam_PAAD_DAPIN,superfamily_DEATH_like
NLRP8	126205	genome.wustl.edu	37	19	56459355	56459355	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176811.2	+1	provisional	p.F29L	0.000	225	0%	556	34%	0	-	benign(0)	deleterious(0)	neutral(0.445)	NULL
NLRP8	126205	genome.wustl.edu	37	19	56459529	56459529	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176811.2	+1	provisional	p.L87	0.002	162	0%	351	35.3%	0	-	-	-	-	HMMPfam_PAAD_DAPIN,superfamily_DEATH domain
NLRP5	126206	genome.wustl.edu	37	19	56538691	56538691	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153447.4	+1	reviewed	p.F364	0.002	50	0%	93	39.8%	0	-	-	-	-	HMMPfam_NACHT,superfamily_SSF52540
NLRP5	126206	genome.wustl.edu	37	19	56539691	56539691	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153447.4	+1	reviewed	p.E698*	0.010	72	0%	93	32.3%	0	-	-	-	-	NULL
GALP	85569	genome.wustl.edu	37	19	56688550	56688550	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033106.3	+1	reviewed	p.A25T	0.002	86	1.2%	120	29.2%	0	-	unknown(0)	-	-	NULL
ZNF582	147948	genome.wustl.edu	37	19	56895610	56895610	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144690.1	-1	provisional	p.E392D	1.000	164	0%	160	34.4%	0	-	benign(0.224)	tolerated(0.06)	neutral(0.345)	superfamily_SSF57667
ZNF583	147949	genome.wustl.edu	37	19	56934298	56934298	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152478.2	+1	validated	p.K91E	0.047	51	0%	71	33.8%	4	25%	benign(0.002)	tolerated(0.38)	neutral(0.018)	NULL
ZNF583	147949	genome.wustl.edu	37	19	56935336	56935336	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152478.2	+1	validated	p.E437*	0.969	103	0%	132	28%	5	20%	-	-	-	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF583	147949	genome.wustl.edu	37	19	56935439	56935439	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152478.2	+1	validated	p.K471T	0.021	126	0%	154	27.3%	4	100%	probably_damaging(0.983)	deleterious(0)	deleterious(0.873)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF471	57573	genome.wustl.edu	37	19	57035887	57035887	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020813.2	+1	validated	p.E151*	0.001	104	0%	146	21.9%	0	-	-	-	-	NULL
ZNF471	57573	genome.wustl.edu	37	19	57036620	57036620	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020813.2	+1	validated	p.R395I	0.987	133	0%	168	32.7%	3	100%	probably_damaging(0.983)	deleterious(0.02)	deleterious(0.812)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF471	57573	genome.wustl.edu	37	19	57036704	57036704	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020813.2	+1	validated	p.R423I	1.000	162	0%	242	35.5%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZFP28	140612	genome.wustl.edu	37	19	57051087	57051087	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020828.1	+1	provisional	e2+2	0.885	174	0%	358	31%	0	-	-	-	-	-
ZFP28	140612	genome.wustl.edu	37	19	57061510	57061510	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020828.1	+1	provisional	p.K254N	0.001	121	0%	175	42.9%	0	-	possibly_damaging(0.911)	deleterious(0)	deleterious(0.807)	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
ZFP28	140612	genome.wustl.edu	37	19	57066108	57066108	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020828.1	+1	provisional	p.K652E	0.998	151	0%	152	27.6%	5	0%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZFP28	140612	genome.wustl.edu	37	19	57066316	57066316	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020828.1	+1	provisional	p.R721I	1.000	178	0%	228	37.3%	4	25%	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZFP28	140612	genome.wustl.edu	37	19	57066484	57066484	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020828.1	+1	provisional	p.R777I	0.995	194	0%	247	33.2%	5	40%	probably_damaging(0.99)	tolerated(0.17)	deleterious(0.500)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF835	90485	genome.wustl.edu	37	19	57175250	57175250	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005850.1	-1	provisional	p.T461	0.001	39	0%	50	36%	1	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZIM2	23619	genome.wustl.edu	37	19	57286431	57286431	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015363.4	-1	reviewed	p.V403	0.000	66	0%	96	31.2%	0	-	-	-	-	superfamily_SSF57667
PEG3-AS1	100169890	genome.wustl.edu	37	19	57324982	57324982	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_023847.2	+1	validated	NULL	0.000	66	0%	78	35.9%	1	0%	-	-	-	-
PEG3	5178	genome.wustl.edu	37	19	57326007	57326007	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006210.2	-1	reviewed	p.A1268V	0.340	104	0%	144	28.5%	0	-	benign(0.014)	tolerated(0.16)	neutral(0.060)	superfamily_C2H2 and C2HC zinc fingers
PEG3	5178	genome.wustl.edu	37	19	57326722	57326722	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006210.2	-1	reviewed	p.R1030W	0.000	225	0%	259	31.3%	1	0%	benign(0.013)	tolerated(0.21)	neutral(0.044)	NULL
PEG3	5178	genome.wustl.edu	37	19	57326744	57326744	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006210.2	-1	reviewed	p.E1022D	0.019	194	0%	237	26.6%	1	0%	benign(0.251)	deleterious(0.04)	neutral(0.374)	NULL
PEG3	5178	genome.wustl.edu	37	19	57327758	57327758	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006210.2	-1	reviewed	p.L684	0.012	133	0%	145	29%	0	-	-	-	-	superfamily_C2H2 and C2HC zinc fingers
PEG3	5178	genome.wustl.edu	37	19	57335658	57335658	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006210.2	-1	reviewed	p.E122D	0.296	100	0%	121	42.1%	0	-	possibly_damaging(0.945)	deleterious(0)	deleterious(0.834)	HMMPfam_SCAN,HMMSmart_SM00431
ZNF264	9422	genome.wustl.edu	37	19	57724221	57724221	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003417.4	+1	reviewed	p.R586*	0.395	93	0%	132	31.8%	2	0%	-	-	-	NULL
LOC100288211	100288211	genome.wustl.edu	37	19	57828640	57828640	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343660.1	-1	model	p.G97	1.000	105	0%	170	30.6%	0	-	-	-	-	HMMPfam_DUF862
LOC100288211	100288211	genome.wustl.edu	37	19	57828878	57828878	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343660.1	-1	model	p.K18T	1.000	135	0%	180	33.9%	0	-	-	-	-	HMMPfam_DUF862
ZNF543	125919	genome.wustl.edu	37	19	57839172	57839172	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_213598.3	+1	validated	p.K114N	0.000	65	0%	126	36.5%	0	-	benign(0.025)	tolerated(0.53)	neutral(0.009)	NULL
ZNF304	57343	genome.wustl.edu	37	19	57867682	57867682	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020657.2	+1	validated	p.D149Y	0.000	77	0%	141	36.9%	3	66.6%	benign(0.301)	deleterious(0.04)	neutral(0.442)	NULL
ZNF304	57343	genome.wustl.edu	37	19	57868159	57868159	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020657.2	+1	validated	p.T308A	0.000	131	0%	197	37.6%	4	75%	benign(0.073)	tolerated(0.39)	neutral(0.021)	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF304	57343	genome.wustl.edu	37	19	57868301	57868301	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020657.2	+1	validated	p.R355I	0.922	102	0%	159	37.1%	2	0%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF17	7565	genome.wustl.edu	37	19	57932599	57932599	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006959.2	+1	validated	p.R580I	0.000	87	0%	171	32.2%	4	0%	probably_damaging(0.979)	deleterious(0)	deleterious(0.867)	superfamily_C2H2 and C2HC zinc fingers
ZNF749	388567	genome.wustl.edu	37	19	57954743	57954743	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001023561.2	+1	provisional	p.P76L	0.221	126	0%	230	38.3%	1	0%	possibly_damaging(0.452)	tolerated(0.21)	neutral(0.192)	NULL
ZNF749	388567	genome.wustl.edu	37	19	57955756	57955756	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001023561.2	+1	provisional	p.E414K	0.000	105	0%	194	26.8%	0	-	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF416	55659	genome.wustl.edu	37	19	58083923	58083923	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017879.1	-1	provisional	p.R450I	0.000	131	0%	162	36.4%	5	60%	possibly_damaging(0.715)	tolerated(0.18)	neutral(0.315)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZSCAN4	201516	genome.wustl.edu	37	19	58187629	58187629	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152677.2	+1	validated	p.I39S	0.000	142	0%	251	31.9%	0	-	possibly_damaging(0.482)	deleterious(0.02)	deleterious(0.543)	HMMPfam_SCAN
ZNF551	90233	genome.wustl.edu	37	19	58199631	58199631	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138347.3	+1	validated	p.R647I	0.000	113	0%	152	37.5%	0	-	possibly_damaging(0.828)	tolerated(0.1)	deleterious(0.601)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF154	7710	genome.wustl.edu	37	19	58213908	58213908	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001085384.1	-1	validated	p.E137K	0.000	178	0%	285	29.5%	0	-	possibly_damaging(0.926)	deleterious(0.02)	deleterious(0.758)	NULL
ZNF587	84914	genome.wustl.edu	37	19	58350492	58350492	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343662.1	+1	model	p.E46D	0.937	153	0%	390	30%	1	100%	possibly_damaging(0.948)	deleterious(0)	deleterious(0.836)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF418	147686	genome.wustl.edu	37	19	58439133	58439133	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133460.1	-1	provisional	p.S139N	0.037	208	0%	435	30.1%	0	-	benign(0.099)	tolerated(0.11)	neutral(0.279)	NULL
ZNF256	10172	genome.wustl.edu	37	19	58453270	58453270	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005773.2	-1	validated	p.K302	0.117	109	0%	171	33.9%	5	60%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF606	80095	genome.wustl.edu	37	19	58489781	58489781	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025027.3	-1	validated	p.R756I	1.000	156	0%	258	35.7%	9	66.6%	possibly_damaging(0.664)	tolerated(0.16)	neutral(0.294)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZSCAN18	65982	genome.wustl.edu	37	19	58596411	58596411	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145542.1	-1	validated	p.A448T	0.001	23	0%	26	42.3%	33	63.6%	benign(0.017)	tolerated(0.6)	neutral(0.005)	NULL
ZNF497	162968	genome.wustl.edu	37	19	58868338	58868338	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198458.1	-1	provisional	p.E222K	0.026	9	0.000	27	0.370	6	16.6%	possibly_damaging(0.878)	tolerated(0.09)	deleterious(0.639)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF132	7691	genome.wustl.edu	37	19	58945207	58945207	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003433.3	-1	validated	p.R535I	0.005	159	0%	231	41.6%	1	0%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF132	7691	genome.wustl.edu	37	19	58945795	58945795	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003433.3	-1	validated	p.R339I	0.984	100	0%	156	31.4%	1	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF132	7691	genome.wustl.edu	37	19	58946575	58946575	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003433.3	-1	validated	p.S79Y	0.041	27	0%	33	27.3%	1	0%	benign(0.001)	tolerated(1)	-	HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF132	7691	genome.wustl.edu	37	19	58948423	58948423	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003433.3	-1	validated	p.T75A	0.021	76	0%	177	33.9%	1	0%	possibly_damaging(0.653)	tolerated(0.83)	neutral(0.230)	HMMPfam_KRAB,HMMSmart_SM00349,superfamily_KRAB domain (Kruppel-associated box Pfam 01352)
ZNF324B	388569	genome.wustl.edu	37	19	58966461	58966461	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000391696	+1	known	p.L40	0.000	33	0%	61	36.1%	0	-	-	-	-	NULL
ZNF324B	388569	genome.wustl.edu	37	19	58967502	58967502	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207395.2	+1	validated	p.F397	0.000	20	0%	29	34.5%	7	71.4%	-	-	-	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
SLC27A5	10998	genome.wustl.edu	37	19	59012749	59012749	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012254.2	-1	reviewed	p.F362L	1.000	61	0%	127	36.2%	0	-	possibly_damaging(0.942)	deleterious(0)	deleterious(0.832)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
MZF1	7593	genome.wustl.edu	37	19	59074680	59074680	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003422.2	-1	validated	p.P322T	0.001	15	0%	36	41.7%	13	30.7%	benign(0)	deleterious(0)	neutral(0.445)	NULL
TBC1D20	128637	genome.wustl.edu	37	20	419792	419792	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144628.2	-1	validated	p.E306K	0.893	99	0%	227	29.1%	28	42.8%	benign(0.001)	tolerated(1)	-	NULL
RAD21L1	642636	genome.wustl.edu	37	20	1223296	1223296	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136566.2	+1	validated	p.R297I	0.998	76	0%	89	29.2%	0	-	possibly_damaging(0.816)	deleterious(0)	deleterious(0.753)	NULL
RAD21L1	642636	genome.wustl.edu	37	20	1223764	1223764	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136566.2	+1	validated	p.S369	0.716	221	0%	196	37.8%	0	-	-	-	-	NULL
SDCBP2	27111	genome.wustl.edu	37	20	1294124	1294124	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080489.3	-1	validated	p.G82R	0.001	22	0%	12	33.3%	2	0%	benign(0.408)	tolerated(0.23)	neutral(0.174)	NULL
NSFL1C	55968	genome.wustl.edu	37	20	1426309	1426309	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016143.3	-1	reviewed	e8+2	1.000	150	0%	227	25.6%	7	85.7%	-	-	-	-
SIRPB2	284759	genome.wustl.edu	37	20	1457957	1457957	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000381628	-1	known	p.S198*	0.004	157	0%	201	34.3%	0	-	-	-	-	NULL
SIRPB1	10326	genome.wustl.edu	37	20	1546832	1546832	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006065.3	-1	reviewed	p.A389V	0.000	176	0%	204	31.4%	0	-	possibly_damaging(0.753)	tolerated(1)	neutral(0.277)	NULL
PDYN	5173	genome.wustl.edu	37	20	1961108	1961108	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024411.2	-1	reviewed	p.G209V	1.000	132	0%	147	31.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SNORD57	26792	genome.wustl.edu	37	20	2637646	2637646	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_002738.1	+1	validated	NULL	1.000	104	0%	270	35.6%	2	0%	-	-	-	-
EBF4	57593	genome.wustl.edu	37	20	2690252	2690252	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001110514.1	+1	provisional	p.R170Q	1.000	195	0%	284	34.9%	6	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	NULL
EBF4	57593	genome.wustl.edu	37	20	2736357	2736357	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001110514.1	+1	provisional	p.S538L	1.000	38	0%	54	38.9%	3	0%	possibly_damaging(0.662)	deleterious(0)	deleterious(0.678)	NULL
CPXM1	56265	genome.wustl.edu	37	20	2776653	2776653	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019609.4	-1	reviewed	p.T466N	0.745	127	0.8%	293	35.2%	122	0%	benign(0.061)	tolerated(0.3)	neutral(0.033)	HMMPfam_Peptidase_M14,HMMSmart_SM00631,superfamily_Zn-dependent exopeptidases
VPS16	64601	genome.wustl.edu	37	20	2840907	2840907	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022575.2	+1	reviewed	p.S88F	1.000	215	0%	489	35.6%	12	58.3%	benign(0.113)	tolerated(0.14)	neutral(0.259)	HMMPfam_Vps16_N
VPS16	64601	genome.wustl.edu	37	20	2841684	2841684	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022575.2	+1	reviewed	p.H233Q	1.000	90	0%	191	29.8%	29	55.1%	benign(0.141)	tolerated(0.05)	neutral(0.357)	HMMPfam_Vps16_N
PTPRA	5786	genome.wustl.edu	37	20	2967463	2967463	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002836.3	+1	reviewed	p.I165	0.894	324	0%	588	32.7%	10	40%	-	-	-	NULL
PTPRA	5786	genome.wustl.edu	37	20	2985771	2985771	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002836.3	+1	reviewed	p.R270*	1.000	318	0%	544	30.5%	10	10%	-	-	-	HMMPfam_Y_phosphatase,HMMSmart_PTPc,superfamily_SSF52799
UBOX5	22888	genome.wustl.edu	37	20	3102199	3102199	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014948.2	-1	validated	p.Q362H	0.992	103	0%	233	33.5%	3	0%	benign(0.044)	tolerated(0.24)	neutral(0.040)	NULL
UBOX5	22888	genome.wustl.edu	37	20	3103212	3103212	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014948.2	-1	validated	p.E25K	1.000	67	0%	197	34%	1	100%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	NULL
ENSG00000250798	0	genome.wustl.edu	37	20	3127402	3127402	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000502279	+1	novel	NULL	0.000	58	0%	114	37.7%	30	50%	-	-	-	-
C20orf194	25943	genome.wustl.edu	37	20	3274898	3274898	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009984.1	-1	validated	p.L709I	1.000	81	0%	137	35%	1	100%	possibly_damaging(0.645)	deleterious(0.05)	deleterious(0.572)	NULL
C20orf194	25943	genome.wustl.edu	37	20	3298955	3298955	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009984.1	-1	validated	p.Q483H	1.000	77	0%	123	34.1%	2	50%	possibly_damaging(0.669)	tolerated(0.16)	neutral(0.296)	NULL
C20orf194	25943	genome.wustl.edu	37	20	3362095	3362095	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009984.1	-1	validated	p.L72I	1.000	166	0%	157	24.8%	3	33.3%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	NULL
C20orf194	25943	genome.wustl.edu	37	20	3363140	3363140	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009984.1	-1	validated	p.R33W	1.000	73	0%	98	26.5%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
SIGLEC1	6614	genome.wustl.edu	37	20	3686562	3686562	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023068.3	-1	reviewed	p.D179N	1.000	56	0%	95	32.6%	0	-	probably_damaging(1)	tolerated(0.34)	deleterious(0.523)	HMMSmart_SM00409,HMMPfam_C2-set_2,superfamily_Immunoglobulin
HSPA12B	116835	genome.wustl.edu	37	20	3731489	3731489	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052970.3	+1	reviewed	p.R447Q	1.000	117	0%	247	33.2%	2	0%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	superfamily_SSF53067
AP5S1	55317	genome.wustl.edu	37	20	3804914	3804914	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018347.1	+1	predicted	p.E191	1.000	47	0%	103	30.1%	8	62.5%	-	-	-	NULL
SMOX	54498	genome.wustl.edu	37	20	4162787	4162787	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175839.1	+1	reviewed	p.A221T	1.000	21	0%	26	42.3%	14	28.5%	benign(0.418)	tolerated(0.3)	neutral(0.164)	HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain
SMOX	54498	genome.wustl.edu	37	20	4164168	4164168	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175839.1	+1	reviewed	p.R466Q	1.000	112	0.9%	159	29.6%	25	16%	probably_damaging(1)	deleterious(0.04)	deleterious(0.849)	HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain,superfamily_FAD-linked reductases C-terminal domain
SMOX	54498	genome.wustl.edu	37	20	4168031	4168031	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175839.1	+1	reviewed	p.D549Y	1.000	23	0%	27	48.1%	19	42.1%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	superfamily_FAD/NAD(P)-binding domain
PRNP	5621	genome.wustl.edu	37	20	4680289	4680289	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000311.3	+1	reviewed	p.F141	0.977	57	0%	129	38.8%	9	22.2%	-	-	-	HMMPfam_Prion,HMMSmart_SM00157,superfamily_Prion-like
PRNP	5621	genome.wustl.edu	37	20	4680478	4680478	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000311.3	+1	reviewed	p.K204N	1.000	172	0%	373	33.5%	19	5.2%	possibly_damaging(0.7)	deleterious(0)	deleterious(0.696)	HMMPfam_Prion,HMMSmart_SM00157,PatternScan_PRION_2,superfamily_Prion-like
PRNP	5621	genome.wustl.edu	37	20	4680598	4680598	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000311.3	+1	reviewed	p.I244	1.000	87	0%	180	39.4%	18	5.5%	-	-	-	HMMPfam_Prion
PRND	23627	genome.wustl.edu	37	20	4705514	4705514	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012409.2	+1	reviewed	p.T106I	0.001	53	0%	51	27.5%	0	-	possibly_damaging(0.647)	tolerated(0.18)	neutral(0.283)	HMMPfam_Prion,superfamily_Prion-like
RASSF2	9770	genome.wustl.edu	37	20	4770249	4770249	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014737.2	-1	reviewed	p.K211T	1.000	188	0%	350	27.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_RA,HMMSmart_RA
SLC23A2	9962	genome.wustl.edu	37	20	4880332	4880332	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005116.5	-1	reviewed	p.T117	0.035	77	0%	156	35.3%	2	50%	-	-	-	HMMPfam_Xan_ur_permease
PROKR2	128674	genome.wustl.edu	37	20	5294688	5294688	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144773.2	-1	reviewed	p.E110K	0.998	160	0%	303	34%	0	-	probably_damaging(0.965)	tolerated(0.87)	neutral(0.407)	HMMPfam_7tm_1,superfamily_SSF81321
C20orf196	149840	genome.wustl.edu	37	20	5843908	5843908	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152504.2	+1	predicted	p.K139N	0.067	87	1.1%	122	35.2%	11	63.6%	benign(0.315)	deleterious(0.03)	neutral(0.463)	NULL
TRMT6	51605	genome.wustl.edu	37	20	5927167	5927167	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015939.3	-1	reviewed	p.F47	1.000	168	0%	253	26.9%	11	36.3%	-	-	-	HMMPfam_Gcd10p
CRLS1	54675	genome.wustl.edu	37	20	6017753	6017753	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019095.4	+1	validated	p.A285	0.971	123	0%	242	25.2%	80	35%	-	-	-	NULL
FERMT1	55612	genome.wustl.edu	37	20	6077663	6077663	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017671.4	-1	reviewed	p.L325	1.000	79	0%	120	32.5%	0	-	-	-	-	HMMPfam_FERM_M,superfamily_Second domain of FERM,HMMSmart_SM00295
BMP2	650	genome.wustl.edu	37	20	6750845	6750845	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001200.2	+1	reviewed	p.L24	1.000	24	0%	23	47.8%	0	-	-	-	-	NULL
BMP2	650	genome.wustl.edu	37	20	6758937	6758937	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001200.2	+1	reviewed	p.R131I	1.000	59	1.7%	35	40%	0	-	probably_damaging(0.969)	deleterious(0)	deleterious(0.856)	HMMPfam_TGFb_propeptide
TMX4	56255	genome.wustl.edu	37	20	7980450	7980450	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021156.2	-1	provisional	p.Q132H	1.000	132	0%	78	34.6%	6	50%	probably_damaging(0.992)	tolerated(0.11)	deleterious(0.719)	superfamily_Thiordxn-like_fd,HMMPfam_Thioredoxin
TMX4	56255	genome.wustl.edu	37	20	7980461	7980461	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021156.2	-1	provisional	p.E129K	0.867	139	0%	81	25.9%	9	22.2%	benign(0.101)	tolerated(0.33)	neutral(0.032)	superfamily_Thiordxn-like_fd,HMMPfam_Thioredoxin
PLCB4	5332	genome.wustl.edu	37	20	9318689	9318689	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000933.3	+1	reviewed	p.S67N	1.000	221	0%	151	41.1%	4	100%	probably_damaging(0.982)	deleterious(0.01)	deleterious(0.832)	superfamily_SSF50729
PLCB4	5332	genome.wustl.edu	37	20	9365024	9365024	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000933.3	+1	reviewed	p.E344*	1.000	219	0%	269	32%	10	40%	-	-	-	HMMPfam_PI-PLC-X,HMMSmart_PLCXc,superfamily_PLC-like_Pdiesterase_TIM-brl
PLCB4	5332	genome.wustl.edu	37	20	9404501	9404501	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000933.3	+1	reviewed	p.R797Q	1.000	119	0%	161	23.6%	5	40%	probably_damaging(0.981)	deleterious(0.01)	deleterious(0.831)	HMMSmart_C2,superfamily_C2_CaLB
PLCB4	5332	genome.wustl.edu	37	20	9453996	9453996	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000933.3	+1	reviewed	p.E1148G	1.000	34	0%	58	22.4%	9	44.4%	probably_damaging(0.979)	tolerated(0.07)	deleterious(0.741)	NULL
LAMP5	24141	genome.wustl.edu	37	20	9495548	9495548	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012261.2	+1	validated	p.L17I	0.990	204	0%	295	36.6%	8	12.5%	probably_damaging(0.999)	tolerated(0.06)	deleterious(0.813)	HMMPfam_Lamp
SNAP25	6616	genome.wustl.edu	37	20	10279979	10279979	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003081.2	+1	reviewed	p.I157	0.998	101	0%	125	28.8%	0	-	-	-	-	HMMPfam_SNARE,HMMSmart_SM00397
MKKS	8195	genome.wustl.edu	37	20	10386311	10386311	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018848.2	-1	reviewed	p.L433I	0.008	107	0%	114	22.8%	40	27.5%	benign(0.129)	tolerated(0.49)	neutral(0.021)	HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like
JAG1	182	genome.wustl.edu	37	20	10626109	10626109	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000214.2	-1	reviewed	p.D670N	1.000	80	0%	125	30.4%	20	35%	probably_damaging(0.996)	tolerated(0.11)	deleterious(0.733)	HMMSmart_EGF_CA,PatternScan_EGF_CA,superfamily_SSF57196
JAG1	182	genome.wustl.edu	37	20	10653622	10653622	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000214.2	-1	reviewed	p.E38D	1.000	30	0%	31	48.4%	5	80%	possibly_damaging(0.8)	deleterious(0.03)	deleterious(0.665)	HMMPfam_MNNL
ISM1	140862	genome.wustl.edu	37	20	13260371	13260371	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080826.1	+1	validated	p.D157Y	0.998	71	0%	83	30.1%	4	25%	probably_damaging(0.966)	deleterious(0.01)	deleterious(0.814)	NULL
ISM1	140862	genome.wustl.edu	37	20	13260442	13260442	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080826.1	+1	validated	p.Y180	0.988	77	1.3%	80	30%	2	0%	-	-	-	NULL
SEL1L2	80343	genome.wustl.edu	37	20	13830178	13830178	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025229.1	-1	validated	p.L674I	0.955	137	0%	208	27.9%	0	-	possibly_damaging(0.942)	tolerated(0.83)	neutral(0.388)	NULL
SEL1L2	80343	genome.wustl.edu	37	20	13846120	13846120	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025229.1	-1	validated	p.K482R	1.000	104	0%	121	35.5%	0	-	benign(0.247)	tolerated(1)	neutral(0.025)	NULL
SEL1L2	80343	genome.wustl.edu	37	20	13894444	13894444	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025229.1	-1	validated	p.S178*	0.990	245	0.4%	270	26.7%	0	-	-	-	-	HMMPfam_Sel1,HMMSmart_SEL1,superfamily_SSF81901
KIF16B	55614	genome.wustl.edu	37	20	16362393	16362393	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024704.3	-1	validated	e18-1	1.000	341	0%	329	29.5%	0	-	-	-	-	-
SNRPB2	6629	genome.wustl.edu	37	20	16721614	16721614	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003092.3	+1	reviewed	p.P214	0.054	133	0%	119	31.1%	148	43.2%	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
PCSK2	5126	genome.wustl.edu	37	20	17240914	17240914	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002594.2	+1	reviewed	p.F69	1.000	167	0%	145	34.5%	0	-	-	-	-	superfamily_Protease propeptides/inhibitors
PCSK2	5126	genome.wustl.edu	37	20	17240971	17240971	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002594.2	+1	reviewed	p.Q88H	1.000	137	0%	98	29.6%	0	-	benign(0)	tolerated(0.19)	neutral(0.050)	superfamily_Protease propeptides/inhibitors
PCSK2	5126	genome.wustl.edu	37	20	17339014	17339014	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002594.2	+1	reviewed	p.R109*	1.000	164	0%	208	43.8%	0	-	-	-	-	NULL
DSTN	11034	genome.wustl.edu	37	20	17581440	17581440	+	Missense_Mutation	SNP	C	C	T	rs138670114		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006870.3	+1	reviewed	p.R21C	1.000	79	0%	95	29.5%	158	34.8%	benign(0.015)	deleterious(0.01)	neutral(0.406)	HMMPfam_Cofilin_ADF,HMMSmart_SM00102,superfamily_Actin depolymerizing proteins
DSTN	11034	genome.wustl.edu	37	20	17585273	17585273	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006870.3	+1	reviewed	p.Q129*	1.000	193	0%	246	30.1%	317	39.7%	-	-	-	HMMPfam_Cofilin_ADF,HMMSmart_SM00102,superfamily_Actin depolymerizing proteins
C20orf72	92667	genome.wustl.edu	37	20	17968818	17968818	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052865.2	+1	predicted	p.L247	1.000	72	0%	152	31.6%	11	45.4%	-	-	-	NULL
CSRP2BP	57325	genome.wustl.edu	37	20	18165371	18165371	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020536.4	+1	reviewed	p.L704	1.000	287	0%	435	30.8%	31	41.9%	-	-	-	HMMPfam_Acetyltransf_1,superfamily_Acyl_CoA_acyltransferase
DZANK1	55184	genome.wustl.edu	37	20	18365049	18365049	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099407.1	-1	validated	p.D751E	0.228	112	0%	154	37%	3	66.6%	probably_damaging(0.993)	deleterious(0)	deleterious(0.895)	NULL
SEC23B	10483	genome.wustl.edu	37	20	18506533	18506533	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006363.4	+1	reviewed	p.R264Q	1.000	178	0%	275	33.8%	76	44.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sec23_trunk,superfamily_SSF53300,superfamily_SSF81995
SEC23B	10483	genome.wustl.edu	37	20	18511383	18511383	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006363.4	+1	reviewed	p.R390I	1.000	172	0%	196	31.6%	60	43.3%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_Sec23_trunk,superfamily_SSF53300,superfamily_SSF81995
DTD1	92675	genome.wustl.edu	37	20	18724751	18724751	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080820.4	+1	reviewed	p.K162M	1.000	59	0%	127	40.2%	36	47.2%	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	NULL
SLC24A3	57419	genome.wustl.edu	37	20	19664950	19664950	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020689.3	+1	validated	p.L344	1.000	164	0%	205	40%	2	0%	-	-	-	NULL
SLC24A3	57419	genome.wustl.edu	37	20	19673952	19673952	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020689.3	+1	validated	p.F458	0.996	115	0%	150	34%	5	0%	-	-	-	NULL
CRNKL1	51340	genome.wustl.edu	37	20	20031197	20031197	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016652.4	-1	reviewed	p.E202*	1.000	395	0%	586	32.1%	6	33.3%	-	-	-	NULL
C20orf26	26074	genome.wustl.edu	37	20	20177249	20177249	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015585.3	+1	validated	p.E542D	0.829	166	0%	256	35.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Acyl-CoA N-acyltransferases (Nat)
C20orf26	26074	genome.wustl.edu	37	20	20226844	20226844	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015585.3	+1	validated	p.K715T	0.994	248	0%	289	29.8%	0	-	benign(0.005)	tolerated(0.2)	neutral(0.049)	superfamily_FAD/NAD(P)-binding domain
RALGAPA2	57186	genome.wustl.edu	37	20	20553704	20553704	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020343.2	-1	validated	p.E906K	0.999	78	0%	122	25.4%	4	50%	probably_damaging(0.973)	deleterious(0.02)	deleterious(0.798)	NULL
RALGAPA2	57186	genome.wustl.edu	37	20	20571959	20571959	+	Splice_Site	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020343.2	-1	validated	e17-1	1.000	76	0%	104	29.8%	0	-	-	-	-	-
RALGAPA2	57186	genome.wustl.edu	37	20	20601238	20601238	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000430436	-1	known	p.Q240H	1.000	212	0%	268	42.5%	1	0%	-	-	-	NULL
XRN2	22803	genome.wustl.edu	37	20	21319713	21319713	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012255.3	+1	reviewed	p.R422I	1.000	238	0%	217	30.4%	29	31%	benign(0.208)	tolerated(0.09)	neutral(0.317)	NULL
XRN2	22803	genome.wustl.edu	37	20	21369960	21369960	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012255.3	+1	reviewed	p.R946K	1.000	260	0%	291	29.6%	56	32.1%	probably_damaging(0.971)	deleterious(0)	deleterious(0.857)	NULL
PAX1	5075	genome.wustl.edu	37	20	21687464	21687464	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006192.3	+1	validated	p.I225	0.977	29	0%	32	37.5%	0	-	-	-	-	NULL
FOXA2	3170	genome.wustl.edu	37	20	22562657	22562657	+	Missense_Mutation	SNP	A	A	T	rs7351141		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021784.4	-1	reviewed	p.L408H	1.000	569	0%	865	35%	48	29.1%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	HMMPfam_HNF_C
CST11	140880	genome.wustl.edu	37	20	23432533	23432533	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130794.1	-1	reviewed	p.L85M	0.000	120	0%	136	35.3%	0	-	possibly_damaging(0.95)	deleterious(0.03)	deleterious(0.758)	HMMPfam_Cystatin,HMMSmart_SM00043,superfamily_Cystatin/monellin
CST9L	128821	genome.wustl.edu	37	20	23545667	23545667	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080610.2	-1	reviewed	p.T121I	0.181	142	0%	322	31.7%	0	-	possibly_damaging(0.767)	tolerated(0.5)	neutral(0.294)	HMMPfam_Cystatin,superfamily_Cystatin/monellin
CST9L	128821	genome.wustl.edu	37	20	23548945	23548945	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080610.2	-1	reviewed	p.P48H	0.013	169	0%	148	31.8%	0	-	probably_damaging(0.994)	deleterious(0.02)	deleterious(0.835)	superfamily_Cystatin/monellin
CST2	1470	genome.wustl.edu	37	20	23804727	23804727	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001322.2	-1	reviewed	p.S119Y	0.045	236	0%	286	27.3%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Cystatin,HMMSmart_CY,superfamily_SSF54403
SYNDIG1	79953	genome.wustl.edu	37	20	24523908	24523908	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024893.1	+1	provisional	p.P59S	0.000	24	0%	30	40%	1	0%	benign(0)	tolerated(0.57)	neutral(0.006)	NULL
C20orf3	57136	genome.wustl.edu	37	20	24950233	24950233	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000451442	-1	known	p.R244Q	0.360	112	0%	169	30.2%	95	52.6%	-	-	-	HMMPfam_Str_synth,superfamily_Calcium-dependent phosphotriesterase
ENTPD6	955	genome.wustl.edu	37	20	25190505	25190505	+	Missense_Mutation	SNP	G	G	A	rs144718324	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001247.2	+1	reviewed	p.E133K	1.000	232	0%	544	26.8%	19	57.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GDA1_CD39
ENSG00000202414	0	genome.wustl.edu	37	20	25195393	25195393	+	RNA	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000365544	+1	novel	NULL	0.368	40	0%	46	32.6%	0	-	-	-	-	-
PYGB	5834	genome.wustl.edu	37	20	25269107	25269107	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002862.3	+1	reviewed	p.M605I	1.000	201	0%	311	32.8%	56	35.7%	benign(0)	tolerated(1)	-	HMMPfam_Phosphorylase,superfamily_SSF53756
ABHD12	26090	genome.wustl.edu	37	20	25282912	25282912	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015600.3	-1	validated	p.D367G	0.966	146	0%	203	28.1%	106	34.9%	benign(0.271)	tolerated(0.18)	neutral(0.085)	NULL
NINL	22981	genome.wustl.edu	37	20	25460828	25460828	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025176.4	-1	validated	p.Y629C	0.203	240	0%	400	27%	7	42.8%	probably_damaging(0.978)	tolerated(0.16)	deleterious(0.480)	NULL
NINL	22981	genome.wustl.edu	37	20	25470566	25470566	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025176.4	-1	validated	p.S514L	0.259	246	0%	261	31%	6	33.3%	possibly_damaging(0.888)	tolerated(0.12)	deleterious(0.608)	NULL
FAM182A	284800	genome.wustl.edu	37	20	26063580	26063580	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000246000	+1	known	p.T143	0.046	133	0%	225	30.2%	0	-	-	-	-	NULL
DEFB119	245932	genome.wustl.edu	37	20	29976828	29976828	+	Nonstop_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153323.3	-1	validated	p.*89Y	0.002	162	0%	241	39%	0	-	-	-	-	NULL
HM13	81502	genome.wustl.edu	37	20	30136878	30136878	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178581.1	+1	reviewed	p.G167	1.000	141	0%	279	28.7%	363	38.8%	-	-	-	HMMSmart_PSN,HMMPfam_Peptidase_A22B
TPX2	22974	genome.wustl.edu	37	20	30371571	30371571	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012112.4	+1	validated	p.K420N	1.000	102	0%	168	31%	15	73.3%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
TPX2	22974	genome.wustl.edu	37	20	30380610	30380610	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012112.4	+1	validated	p.R496*	0.995	159	0%	293	30.4%	25	4%	-	-	-	NULL
TPX2	22974	genome.wustl.edu	37	20	30388870	30388870	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012112.4	+1	validated	p.R744Q	1.000	91	0%	120	32.5%	47	12.7%	probably_damaging(0.974)	deleterious(0)	deleterious(0.861)	NULL
TTLL9	164395	genome.wustl.edu	37	20	30458944	30458944	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008409.2	+1	provisional	p.R5	0.001	150	0%	255	39.2%	0	-	-	-	-	NULL
XKR7	343702	genome.wustl.edu	37	20	30585075	30585075	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001011718.1	+1	provisional	p.E519K	1.000	15	0%	19	52.6%	0	-	benign(0.145)	tolerated(0.05)	neutral(0.358)	NULL
HCK	3055	genome.wustl.edu	37	20	30662509	30662509	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002110.3	+1	reviewed	p.S138Y	0.998	59	0%	113	32.7%	1	0%	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	superfamily_SH3-domain,superfamily_SH2 domain
HCK	3055	genome.wustl.edu	37	20	30676429	30676429	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002110.3	+1	reviewed	p.L358	0.998	59	0%	118	29.7%	8	0%	-	-	-	HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
TM9SF4	9777	genome.wustl.edu	37	20	30745677	30745677	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014742.3	+1	validated	p.F470	1.000	145	0%	124	37.1%	49	44.8%	-	-	-	HMMPfam_EMP70
PLAGL2	5326	genome.wustl.edu	37	20	30785144	30785144	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002657.3	-1	reviewed	p.Y201S	1.000	72	0%	58	37.9%	6	16.6%	benign(0.047)	tolerated(0.15)	neutral(0.244)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ASXL1	171023	genome.wustl.edu	37	20	31017141	31017141	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015338.5	+1	reviewed	p.A158T	1.000	94	1.1%	179	33.5%	8	50%	benign(0)	deleterious(0)	neutral(0.445)	NULL
ASXL1	171023	genome.wustl.edu	37	20	31023107	31023107	+	Silent	SNP	C	C	T	rs147278940	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015338.5	+1	reviewed	p.D864	0.000	144	0%	288	24.3%	11	9%	-	-	-	NULL
ASXL1	171023	genome.wustl.edu	37	20	31024141	31024141	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015338.5	+1	reviewed	p.S1209N	0.001	77	0%	152	35.5%	46	34.7%	probably_damaging(0.99)	tolerated(0.16)	deleterious(0.501)	NULL
DNMT3B	1789	genome.wustl.edu	37	20	31372581	31372581	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006892.3	+1	reviewed	p.G74	0.781	95	0%	207	35.7%	1	0%	-	-	-	NULL
DNMT3B	1789	genome.wustl.edu	37	20	31374318	31374318	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006892.3	+1	reviewed	p.R106Q	1.000	37	0%	50	32%	3	0%	possibly_damaging(0.949)	deleterious(0.04)	deleterious(0.742)	NULL
EFCAB8	388795	genome.wustl.edu	37	20	31455551	31455551	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000440534	+1	known	p.G69E	0.964	139	0%	259	33.6%	0	-	probably_damaging(0.998)	tolerated(1)	deleterious(0.474)	superfamily_EF-hand
EFCAB8	388795	genome.wustl.edu	37	20	31505149	31505149	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000440534	+1	known	p.Q633H	0.909	86	0%	148	34.5%	0	-	probably_damaging(0.983)	tolerated(0.11)	deleterious(0.701)	HMMSmart_SM00320,superfamily_WD40 repeat-like
BPIFB6	128859	genome.wustl.edu	37	20	31627275	31627275	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174897.2	+1	validated	p.F341	0.003	123	0%	165	36.4%	0	-	-	-	-	HMMPfam_LBP_BPI_CETP_C,HMMSmart_BPI2,superfamily_Bactericidal_perm-incr_a/b_dom
BPIFB4	149954	genome.wustl.edu	37	20	31688243	31688243	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182519.2	+1	validated	p.F527L	0.983	228	0%	409	39.4%	0	-	benign(0)	tolerated(1)	-	HMMPfam_LBP_BPI_CETP_C,HMMSmart_SM00329,superfamily_Bactericidal permeability-increasing protein BPI
BPIFB1	92747	genome.wustl.edu	37	20	31890751	31890751	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033197.2	+1	reviewed	p.I337	0.405	62	0%	101	23.8%	1	0%	-	-	-	superfamily_Bactericidal permeability-increasing protein BPI
CDK5RAP1	51654	genome.wustl.edu	37	20	31967310	31967310	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016408.2	-1	reviewed	p.R355M	1.000	96	0%	239	31.4%	7	28.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00729,HMMPfam_Radical_SAM,superfamily_Radical SAM enzymes
CDK5RAP1	51654	genome.wustl.edu	37	20	31967358	31967358	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016408.2	-1	reviewed	p.R339H	1.000	127	0%	283	39.2%	8	62.5%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMSmart_SM00729,HMMPfam_Radical_SAM,superfamily_Radical SAM enzymes
RALY	22913	genome.wustl.edu	37	20	32664566	32664566	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016732.1	+1	reviewed	p.I201	0.018	58	0%	71	25.4%	203	45.3%	-	-	-	NULL
EIF2S2	8894	genome.wustl.edu	37	20	32684576	32684576	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003908.3	-1	reviewed	p.K190N	1.000	218	0%	360	30.6%	89	35.9%	probably_damaging(1)	tolerated(0.15)	deleterious(0.741)	HMMPfam_eIF-5_eIF-2B,superfamily_Translation initiation factor 2 beta aIF2beta N-terminal domain
NCOA6	23054	genome.wustl.edu	37	20	33329591	33329591	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014071.2	-1	reviewed	p.S1490L	1.000	94	0%	179	35.2%	18	61.1%	probably_damaging(0.978)	deleterious(0)	deleterious(0.865)	NULL
NCOA6	23054	genome.wustl.edu	37	20	33329708	33329708	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014071.2	-1	reviewed	p.M1451T	1.000	131	0%	222	35.6%	24	33.3%	benign(0.012)	deleterious(0)	neutral(0.445)	NULL
MYH7B	57644	genome.wustl.edu	37	20	33568434	33568434	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020884.3	+1	reviewed	p.V174	1.000	119	0%	203	40.4%	0	-	-	-	-	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYH7B	57644	genome.wustl.edu	37	20	33575675	33575675	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020884.3	+1	reviewed	p.F500L	1.000	94	0%	101	32.7%	3	33.3%	benign(0.416)	deleterious(0.03)	deleterious(0.499)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
TRPC4AP	26133	genome.wustl.edu	37	20	33665958	33665958	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015638.2	-1	validated	p.T63M	0.419	151	0%	322	34.2%	18	33.3%	benign(0.011)	tolerated(0.09)	neutral(0.297)	NULL
MMP24	10893	genome.wustl.edu	37	20	33842452	33842452	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006690.3	+1	reviewed	p.E238*	1.000	139	0%	298	30.9%	0	-	-	-	-	"HMMPfam_Peptidase_M10,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain"
MMP24	10893	genome.wustl.edu	37	20	33855133	33855133	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006690.3	+1	reviewed	p.R369W	1.000	69	0%	94	35.1%	1	100%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
UQCC	55245	genome.wustl.edu	37	20	33894507	33894507	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018244.4	-1	reviewed	p.R243*	0.916	133	0%	174	36.8%	13	23%	-	-	-	HMMPfam_Ubiq_cyt_C_chap
UQCC	55245	genome.wustl.edu	37	20	33981906	33981906	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018244.4	-1	reviewed	p.R40C	1.000	84	0%	193	28%	15	40%	possibly_damaging(0.598)	tolerated(0.06)	deleterious(0.529)	NULL
GDF5	8200	genome.wustl.edu	37	20	34022151	34022151	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000557.2	-1	reviewed	p.F354L	0.996	17	0%	22	36.4%	0	-	possibly_damaging(0.605)	-	-	HMMPfam_TGFb_propeptide
SPAG4	6676	genome.wustl.edu	37	20	34207518	34207518	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003116.1	+1	reviewed	p.G309	0.999	31	0%	30	26.7%	5	0%	-	-	-	HMMPfam_Sad1_UNC
CPNE1	8904	genome.wustl.edu	37	20	34220553	34220553	+	Silent	SNP	C	C	T	rs146302278	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003915.4	-1	reviewed	p.E70	0.964	192	0%	405	37.5%	83	38.5%	-	-	-	HMMPfam_C2,HMMSmart_C2,superfamily_C2_CaLB
RBM12	10137	genome.wustl.edu	37	20	34242488	34242488	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006047.4	-1	reviewed	p.A253T	1.000	102	0%	215	34.9%	13	53.8%	unknown(0)	tolerated(0.09)	-	NULL
NFS1	9054	genome.wustl.edu	37	20	34269813	34269813	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021100.3	-1	reviewed	p.I218L	1.000	58	0%	180	32.8%	13	38.4%	benign(0.042)	deleterious(0.01)	neutral(0.408)	HMMPfam_Aminotran_5,superfamily_PLP-dependent transferases
RBM39	9584	genome.wustl.edu	37	20	34312576	34312576	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000448303	-1	known	p.R74C	1.000	98	0%	255	32.2%	77	44.1%	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
EPB41L1	2036	genome.wustl.edu	37	20	34797635	34797635	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012156.2	+1	reviewed	p.A632T	1.000	74	0%	70	41.4%	7	14.2%	probably_damaging(0.98)	tolerated(0.12)	deleterious(0.684)	NULL
DLGAP4	22839	genome.wustl.edu	37	20	35154346	35154346	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014902.4	+1	reviewed	p.F896	0.998	39	0%	74	29.7%	127	41.7%	-	-	-	HMMPfam_GKAP
MYL9	10398	genome.wustl.edu	37	20	35177578	35177578	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006097.3	+1	reviewed	p.D149Y	1.000	69	0%	136	27.9%	328	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_EF-hand
RBL1	5933	genome.wustl.edu	37	20	35696525	35696525	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002895.2	-1	reviewed	p.R119C	1.000	94	0%	90	32.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TTI1	9675	genome.wustl.edu	37	20	36625220	36625220	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014657.1	-1	predicted	p.T977A	1.000	66	0%	61	36.1%	27	59.2%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_ARM-type_fold
KIAA1755	85449	genome.wustl.edu	37	20	36841691	36841691	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029864.1	-1	predicted	p.R1119I	0.001	70	0%	53	30.2%	5	0%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
KIAA1755	85449	genome.wustl.edu	37	20	36869617	36869617	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029864.1	-1	predicted	p.E306*	0.000	122	0%	137	27%	0	-	-	-	-	NULL
RALGAPB	57148	genome.wustl.edu	37	20	37128103	37128103	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020336.2	+1	validated	p.E189D	1.000	195	0%	286	28%	8	37.5%	benign(0)	tolerated(1)	-	NULL
ARHGAP40	343578	genome.wustl.edu	37	20	37272484	37272484	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000243967	+1	known	p.E388*	1.000	103	0%	147	30.6%	0	-	possibly_damaging(0.949)	deleterious(0.04)	deleterious(0.742)	HMMSmart_SM00324,superfamily_GTPase activation domain GAP
PPP1R16B	26051	genome.wustl.edu	37	20	37536706	37536706	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015568.2	+1	reviewed	p.T355I	1.000	96	0%	118	27.1%	2	0%	probably_damaging(0.974)	deleterious(0.03)	deleterious(0.780)	NULL
DHX35	60625	genome.wustl.edu	37	20	37639003	37639003	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021931.2	+1	reviewed	p.K435E	1.000	216	0.5%	282	32.6%	2	50%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
DHX35	60625	genome.wustl.edu	37	20	37650558	37650558	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021931.2	+1	reviewed	p.P525S	0.993	121	0%	187	32.6%	5	40%	benign(0)	tolerated(0.86)	neutral(0.001)	HMMPfam_HA2,superfamily_P-loop containing nucleoside triphosphate hydrolases
PLCG1	5335	genome.wustl.edu	37	20	39795391	39795391	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002660.2	+1	reviewed	p.F731	0.990	119	0%	185	37.8%	80	46.2%	-	-	-	HMMPfam_SH2,HMMSmart_SH2,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_SSF50729,superfamily_SSF55550
EMILIN3	90187	genome.wustl.edu	37	20	39991311	39991311	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052846.1	-1	validated	p.L300	0.998	56	0%	58	25.9%	0	-	-	-	-	NULL
CHD6	84181	genome.wustl.edu	37	20	40049844	40049844	+	Missense_Mutation	SNP	C	C	T	rs149866734	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032221.3	-1	reviewed	p.A1811T	0.000	55	0%	90	45.6%	8	25%	benign(0.004)	deleterious(0.01)	neutral(0.406)	NULL
CHD6	84181	genome.wustl.edu	37	20	40050384	40050384	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032221.3	-1	reviewed	p.C1631R	1.000	129	0%	157	32.5%	5	20%	probably_damaging(0.988)	deleterious(0.02)	deleterious(0.821)	NULL
CHD6	84181	genome.wustl.edu	37	20	40052268	40052268	+	Missense_Mutation	SNP	C	C	A	rs147533747		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032221.3	-1	reviewed	p.K1473N	1.000	205	0%	214	35%	4	50%	probably_damaging(0.996)	tolerated(0.09)	deleterious(0.758)	NULL
CHD6	84181	genome.wustl.edu	37	20	40126809	40126809	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032221.3	-1	reviewed	p.F325V	1.000	66	0%	78	35.9%	7	14.2%	probably_damaging(0.999)	tolerated(0.05)	deleterious(0.836)	HMMPfam_Chromo,HMMSmart_SM00298,superfamily_Chromo domain-like
PTPRT	11122	genome.wustl.edu	37	20	40713337	40713337	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133170.3	-1	reviewed	p.T1393N	1.000	134	0%	155	30.3%	0	-	possibly_damaging(0.804)	deleterious(0.02)	deleterious(0.685)	HMMPfam_Y_phosphatase,HMMSmart_SM00194,HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
PTPRT	11122	genome.wustl.edu	37	20	40864878	40864878	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133170.3	-1	reviewed	p.S797F	1.000	134	0%	155	25.2%	0	-	possibly_damaging(0.819)	deleterious(0.03)	deleterious(0.674)	NULL
PTPRT	11122	genome.wustl.edu	37	20	40980830	40980830	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000454126	-1	known	p.S168Y	1.000	102	0%	157	31.8%	0	-	-	-	-	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
PTPRT	11122	genome.wustl.edu	37	20	41514518	41514518	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133170.3	-1	reviewed	p.G48V	1.000	145	0%	151	30.5%	0	-	benign(0.002)	tolerated(0.07)	neutral(0.319)	HMMPfam_MAM,HMMSmart_SM00137
L3MBTL1	26013	genome.wustl.edu	37	20	42169508	42169508	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032107.3	+1	reviewed	p.T726M	0.000	125	0%	224	37.9%	0	-	possibly_damaging(0.936)	-	-	NULL
GTSF1L	149699	genome.wustl.edu	37	20	42355316	42355316	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_176791.3	-1	validated	p.E7*	0.999	65	0%	136	23.5%	0	-	-	-	-	HMMPfam_UPF0224
GDAP1L1	78997	genome.wustl.edu	37	20	42887240	42887240	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024034.3	+1	reviewed	p.E180D	1.000	13	0%	11	54.5%	0	-	possibly_damaging(0.902)	tolerated(0.05)	deleterious(0.702)	superfamily_Glutathione S-transferase (GST) C-terminal domain
STK4	6789	genome.wustl.edu	37	20	43625885	43625885	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006282.2	+1	reviewed	p.F257V	1.000	136	0%	191	36.1%	3	33.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
STK4	6789	genome.wustl.edu	37	20	43629075	43629075	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006282.2	+1	reviewed	p.D292Y	0.990	165	0%	250	36%	9	33.3%	benign(0.223)	deleterious(0.03)	neutral(0.387)	superfamily_Protein kinase-like (PK-like)
SEMG1	6406	genome.wustl.edu	37	20	43836716	43836716	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003007.3	+1	reviewed	p.L260F	0.000	118	0%	143	37.1%	0	-	probably_damaging(0.999)	tolerated(0.14)	deleterious(0.740)	HMMPfam_Semenogelin
SEMG2	6407	genome.wustl.edu	37	20	43850698	43850698	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003008.2	+1	reviewed	p.P142H	0.042	159	0%	277	34.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Semenogelin
SEMG2	6407	genome.wustl.edu	37	20	43851505	43851505	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003008.2	+1	reviewed	p.S411L	0.001	108	0%	122	22.1%	0	-	possibly_damaging(0.915)	deleterious(0)	deleterious(0.811)	HMMPfam_Semenogelin
SLPI	6590	genome.wustl.edu	37	20	43882222	43882222	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003064.2	-1	reviewed	p.N80D	0.000	169	0%	247	32%	938	40%	benign(0.121)	tolerated(0.61)	neutral(0.013)	NULL
RBPJL	11317	genome.wustl.edu	37	20	43940246	43940246	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014276.2	+1	reviewed	p.P92L	1.000	77	0%	66	43.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P53_like_DNA_bnd,HMMPfam_LAG1-DNAbind
RBPJL	11317	genome.wustl.edu	37	20	43940918	43940918	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014276.2	+1	reviewed	p.R168W	1.000	54	0%	82	39%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	superfamily_P53_like_DNA_bnd,HMMPfam_LAG1-DNAbind
SDC4	6385	genome.wustl.edu	37	20	43955913	43955913	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002999.2	-1	reviewed	p.F196L	1.000	122	0%	231	26.4%	37	0%	possibly_damaging(0.882)	deleterious(0.01)	deleterious(0.750)	NULL
SDC4	6385	genome.wustl.edu	37	20	43955960	43955960	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002999.2	-1	reviewed	p.D181Y	1.000	139	0%	253	34.8%	64	56.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00294
DBNDD2	55861	genome.wustl.edu	37	20	44037061	44037061	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000372710	+1	known	p.R87L	0.000	27	0%	33	36.4%	0	-	possibly_damaging(0.77)	deleterious(0.02)	deleterious(0.669)	NULL
PIGT	51604	genome.wustl.edu	37	20	44047991	44047991	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015937.4	+1	reviewed	p.E184K	1.000	74	1.4%	115	35.7%	89	39.3%	probably_damaging(0.999)	tolerated(0.05)	deleterious(0.836)	HMMPfam_Gpi16
SPINT3	10816	genome.wustl.edu	37	20	44141328	44141328	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006652.1	-1	validated	p.R78M	0.000	150	0%	159	34%	0	-	possibly_damaging(0.565)	deleterious(0.01)	deleterious(0.599)	HMMPfam_Kunitz_BPTI,HMMSmart_KU,PatternScan_BPTI_KUNITZ_1,superfamily_Prot_inh_Kunz-m
WFDC11	259239	genome.wustl.edu	37	20	44279148	44279148	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_147197.2	-1	reviewed	p.R31I	0.000	349	0%	607	36.4%	0	-	benign(0)	tolerated(0.13)	neutral(0.253)	NULL
WFDC10B	280664	genome.wustl.edu	37	20	44313595	44313595	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172131.2	-1	reviewed	p.I48	0.000	116	0%	173	28.3%	0	-	-	-	-	NULL
UBE2C	11065	genome.wustl.edu	37	20	44444362	44444362	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007019.2	+1	reviewed	p.L133	0.941	135	0%	267	30.7%	221	45.2%	-	-	-	HMMPfam_UQ_con,HMMSmart_SM00212,superfamily_UBC-like
NEURL2	140825	genome.wustl.edu	37	20	44517457	44517457	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080749.2	-1	validated	p.R266	1.000	120	0%	208	34.6%	6	66.6%	-	-	-	HMMPfam_SOCS_box
MMP9	4318	genome.wustl.edu	37	20	44639624	44639624	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004994.2	+1	reviewed	p.G195D	0.981	46	0%	77	28.6%	48	0%	probably_damaging(1)	tolerated(0.06)	deleterious(0.823)	"HMMPfam_Peptidase_M10,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain"
MMP9	4318	genome.wustl.edu	37	20	44644890	44644890	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004994.2	+1	reviewed	p.E669D	0.092	107	0%	180	32.2%	131	0%	benign(0.001)	tolerated(0.42)	neutral(0.014)	superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120
SLC12A5	57468	genome.wustl.edu	37	20	44675063	44675063	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134771.1	+1	reviewed	p.R615Q	1.000	136	0.7%	207	37.2%	0	-	benign(0.276)	tolerated(0.05)	neutral(0.375)	HMMPfam_AA_permease
SLC12A5	57468	genome.wustl.edu	37	20	44685096	44685096	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134771.1	+1	reviewed	p.P1024	0.744	105	0%	181	30.9%	0	-	-	-	-	NULL
SLC12A5	57468	genome.wustl.edu	37	20	44685099	44685099	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001134771.1	+1	reviewed	p.E1025D	1.000	104	0%	181	34.8%	0	-	benign(0)	tolerated(0.59)	neutral(0.004)	NULL
NCOA5	57727	genome.wustl.edu	37	20	44695779	44695779	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020967.2	-1	reviewed	p.R182C	1.000	147	0%	172	36.6%	16	43.7%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ZNF334	55713	genome.wustl.edu	37	20	45130704	45130704	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018102.3	-1	validated	p.R425I	1.000	151	0%	148	28.4%	0	-	possibly_damaging(0.692)	deleterious(0)	deleterious(0.692)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF334	55713	genome.wustl.edu	37	20	45130856	45130856	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018102.3	-1	validated	p.E374D	1.000	228	0%	221	34.4%	0	-	possibly_damaging(0.697)	deleterious(0.05)	deleterious(0.595)	superfamily_SSF57667
ZNF334	55713	genome.wustl.edu	37	20	45131281	45131281	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018102.3	-1	validated	p.E233K	0.694	236	0%	263	31.2%	0	-	possibly_damaging(0.892)	tolerated(0.2)	neutral(0.400)	superfamily_SSF57667
ZNF334	55713	genome.wustl.edu	37	20	45131639	45131639	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018102.3	-1	validated	p.E113D	0.000	217	0%	262	30.2%	0	-	possibly_damaging(0.465)	tolerated(0.53)	neutral(0.161)	NULL
EYA2	2139	genome.wustl.edu	37	20	45801367	45801367	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005244.4	+1	reviewed	p.F350L	1.000	141	0%	255	36.5%	16	37.5%	probably_damaging(0.994)	deleterious(0.04)	deleterious(0.801)	HMMPfam_Hydrolase
NCOA3	8202	genome.wustl.edu	37	20	46276076	46276076	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181659.2	+1	reviewed	p.R1171I	1.000	70	0%	147	40.8%	6	66.6%	probably_damaging(1)	tolerated(0.17)	deleterious(0.559)	NULL
ARFGEF2	10564	genome.wustl.edu	37	20	47588912	47588912	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006420.2	+1	reviewed	p.S492Y	1.000	138	0%	215	29.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_ARM-type_fold
ARFGEF2	10564	genome.wustl.edu	37	20	47605070	47605070	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006420.2	+1	reviewed	p.R802W	1.000	41	0%	63	34.9%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7,superfamily_ARM-type_fold
ARFGEF2	10564	genome.wustl.edu	37	20	47606200	47606200	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006420.2	+1	reviewed	p.I931	0.864	93	0%	175	40.6%	5	0%	-	-	-	superfamily_ARM-type_fold
CSE1L	1434	genome.wustl.edu	37	20	47682765	47682765	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001316.2	+1	reviewed	p.R89*	1.000	129	0%	216	30.6%	4	50%	-	-	-	HMMPfam_IBN_N,superfamily_ARM repeat
CSE1L	1434	genome.wustl.edu	37	20	47700578	47700578	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001316.2	+1	reviewed	p.L500I	1.000	223	0%	353	30.6%	16	18.7%	benign(0.094)	tolerated(0.38)	neutral(0.025)	HMMPfam_Cse1,superfamily_ARM repeat
ZNFX1	57169	genome.wustl.edu	37	20	47877011	47877011	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021035.2	-1	validated	p.P802L	0.991	53	0%	124	39.5%	5	20%	benign(0.009)	deleterious(0.03)	neutral(0.365)	superfamily_P-loop containing nucleoside triphosphate hydrolases
ZNFX1	57169	genome.wustl.edu	37	20	47887421	47887421	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021035.2	-1	validated	p.R310*	1.000	144	0%	325	37.2%	6	66.6%	-	-	-	NULL
KCNB1	3745	genome.wustl.edu	37	20	47989734	47989734	+	Missense_Mutation	SNP	G	G	A	rs140932985	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004975.2	-1	reviewed	p.T788M	0.000	277	0%	381	35.4%	0	-	benign(0.15)	tolerated(0.07)	neutral(0.332)	NULL
KCNB1	3745	genome.wustl.edu	37	20	47991437	47991437	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004975.2	-1	reviewed	p.F220	0.143	140	0%	278	32.7%	0	-	-	-	-	superfamily_SSF81324
KCNB1	3745	genome.wustl.edu	37	20	48098751	48098751	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004975.2	-1	reviewed	p.P89	0.235	38	0%	45	33.3%	0	-	-	-	-	HMMSmart_BTB,HMMPfam_K_tetra,superfamily_BTB/POZ_fold
PTGIS	5740	genome.wustl.edu	37	20	48130909	48130909	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000961.3	-1	reviewed	p.F293L	1.000	51	0%	48	35.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_p450,superfamily_Cytochrome_P450
PTGIS	5740	genome.wustl.edu	37	20	48164505	48164505	+	Missense_Mutation	SNP	C	C	T	rs182204601	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000961.3	-1	reviewed	p.D84N	1.000	70	0%	97	27.8%	1	0%	possibly_damaging(0.552)	tolerated(0.6)	neutral(0.193)	superfamily_Cytochrome_P450
PTGIS	5740	genome.wustl.edu	37	20	48166656	48166656	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000961.3	-1	reviewed	p.D49Y	1.000	48	0%	88	37.5%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_p450,superfamily_Cytochrome_P450
SLC9A8	23315	genome.wustl.edu	37	20	48456127	48456127	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015266.1	+1	validated	p.A113	1.000	203	0%	312	31.7%	0	-	-	-	-	HMMPfam_Na_H_Exchanger
SLC9A8	23315	genome.wustl.edu	37	20	48504378	48504378	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015266.1	+1	validated	p.G551W	1.000	47	0%	57	28.1%	9	33.3%	probably_damaging(0.986)	deleterious(0.02)	deleterious(0.818)	NULL
MIR645	693230	genome.wustl.edu	37	20	49202384	49202384	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000385283	+1	known	NULL	0.048	66	0%	93	44.1%	0	-	-	-	-	-
PARD6B	84612	genome.wustl.edu	37	20	49366996	49366996	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032521.2	+1	reviewed	p.E364*	1.000	46	0%	71	25.4%	6	33.3%	-	-	-	NULL
ADNP	23394	genome.wustl.edu	37	20	49509856	49509856	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015339.2	-1	reviewed	p.F465	1.000	165	0%	288	35.4%	19	47.3%	-	-	-	HMMSmart_ZnF_C2H2
ADNP	23394	genome.wustl.edu	37	20	49510335	49510335	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015339.2	-1	reviewed	p.R306*	1.000	201	0.5%	371	32.1%	19	47.3%	-	-	-	NULL
KCNG1	3755	genome.wustl.edu	37	20	49626686	49626686	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002237.3	-1	reviewed	p.R64W	0.592	41	0%	28	42.9%	0	-	benign(0.242)	deleterious(0.03)	neutral(0.389)	HMMSmart_SM00225,superfamily_POZ domain
SALL4	57167	genome.wustl.edu	37	20	50406957	50406957	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020436.3	-1	reviewed	p.E689K	0.865	38	0%	66	39.4%	0	-	probably_damaging(0.987)	tolerated(0.08)	deleterious(0.736)	NULL
SALL4	57167	genome.wustl.edu	37	20	50408820	50408820	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020436.3	-1	reviewed	p.R68W	0.010	44	0%	70	41.4%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
LOC100288393	100288393	genome.wustl.edu	37	20	50769597	50769597	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343724.1	+1	model	p.E17K	0.998	114	0%	234	29.9%	11	63.6%	-	-	-	NULL
ZNF217	7764	genome.wustl.edu	37	20	52192613	52192613	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006526.2	-1	validated	p.R897I	0.521	69	0%	108	40.7%	6	16.6%	probably_damaging(0.966)	deleterious(0.02)	deleterious(0.791)	NULL
ZNF217	7764	genome.wustl.edu	37	20	52193072	52193072	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006526.2	-1	validated	p.R744Q	0.120	97	0%	105	17.1%	12	66.6%	probably_damaging(0.997)	tolerated(0.13)	deleterious(0.719)	NULL
ZNF217	7764	genome.wustl.edu	37	20	52193491	52193491	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006526.2	-1	validated	p.K604N	0.050	225	0%	479	34%	10	40%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
CYP24A1	1591	genome.wustl.edu	37	20	52773964	52773964	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000782.4	-1	reviewed	p.R466Q	0.999	128	0%	192	35.4%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_p450,superfamily_Cytochrome_P450
PFDN4	5203	genome.wustl.edu	37	20	52830974	52830974	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002623.3	+1	reviewed	p.K37E	1.000	67	0%	71	33.8%	39	61.5%	possibly_damaging(0.54)	tolerated(0.44)	neutral(0.196)	HMMPfam_Prefoldin_2,superfamily_Prefoldin
CBLN4	140689	genome.wustl.edu	37	20	54579090	54579090	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080617.4	-1	reviewed	p.S46	1.000	55	0%	65	36.9%	0	-	-	-	-	NULL
FAM209A	200232	genome.wustl.edu	37	20	55099997	55099997	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012971.3	+1	validated	p.R45W	0.016	262	0%	542	26.8%	0	-	probably_damaging(0.994)	deleterious(0)	deleterious(0.897)	NULL
FAM209A	200232	genome.wustl.edu	37	20	55100024	55100024	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012971.3	+1	validated	p.G54C	0.758	273	0%	589	25.8%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	NULL
FAM209A	200232	genome.wustl.edu	37	20	55101089	55101089	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012971.3	+1	validated	p.T160M	0.070	141	0%	270	34.8%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FAM209B	388799	genome.wustl.edu	37	20	55111375	55111375	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013646.2	+1	predicted	p.L133I	0.005	112	0%	233	15.9%	1	0%	possibly_damaging(0.892)	deleterious(0)	deleterious(0.796)	NULL
TFAP2C	7022	genome.wustl.edu	37	20	55208590	55208590	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003222.3	+1	reviewed	p.C256	1.000	114	0%	209	33%	6	33.3%	-	-	-	HMMPfam_TF_AP-2
TFAP2C	7022	genome.wustl.edu	37	20	55212806	55212806	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003222.3	+1	reviewed	p.E364*	1.000	47	0%	83	31.3%	4	75%	-	-	-	HMMPfam_TF_AP-2
SPO11	23626	genome.wustl.edu	37	20	55906899	55906899	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012444.2	+1	reviewed	p.L48I	1.000	163	0%	176	34.1%	0	-	probably_damaging(1)	tolerated(0.14)	deleterious(0.750)	NULL
PCK1	5105	genome.wustl.edu	37	20	56138663	56138663	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002591.3	+1	reviewed	p.A281T	1.000	117	0%	137	30.7%	0	-	possibly_damaging(0.912)	tolerated(0.08)	deleterious(0.663)	HMMPfam_PEPCK,superfamily_SSF53795
PCK1	5105	genome.wustl.edu	37	20	56139331	56139331	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002591.3	+1	reviewed	p.I356	1.000	153	0%	214	35%	0	-	-	-	-	HMMPfam_PEPCK,superfamily_SSF53795
ZBP1	81030	genome.wustl.edu	37	20	56191218	56191218	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000432548	-1	known	p.S114L	0.029	59	0%	94	35.1%	0	-	-	-	-	NULL
ANKRD60	140731	genome.wustl.edu	37	20	56798108	56798108	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001134442.3	-1	model	p.K187N	1.000	118	0.8%	156	28.2%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Ank,superfamily_ANK
VAPB	9217	genome.wustl.edu	37	20	56993321	56993321	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004738.3	+1	reviewed	p.R38Q	1.000	102	0%	212	30.2%	15	46.6%	benign(0.002)	tolerated(0.31)	neutral(0.027)	HMMPfam_Motile_Sperm,superfamily_PapD-like
NPEPL1	79716	genome.wustl.edu	37	20	57273827	57273827	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024663.3	+1	validated	p.E199K	1.000	29	0%	61	34.4%	10	20%	benign(0.004)	tolerated(0.15)	neutral(0.241)	HMMPfam_Peptidase_M17,superfamily_Zn-dependent exopeptidases
NPEPL1	79716	genome.wustl.edu	37	20	57288706	57288706	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000371137	+1	known	p.F411C	0.000	19	0%	21	42.9%	3	33.3%	-	-	-	NULL
NPEPL1	79716	genome.wustl.edu	37	20	57289675	57289675	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024663.3	+1	validated	p.F454	0.930	80	0%	97	42.3%	27	11.1%	-	-	-	HMMPfam_Peptidase_M17,superfamily_Zn-dependent exopeptidases
GNAS	2778	genome.wustl.edu	37	20	57484414	57484414	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080425.2	+1	reviewed	p.R842C	0.994	132	0%	218	38.1%	2300	41.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_G-alpha,superfamily_Transducin (alpha subunit) insertion domain,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
GNAS	2778	genome.wustl.edu	37	20	57485438	57485438	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080425.2	+1	reviewed	p.F983L	1.000	33	0%	35	31.4%	3233	38.8%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_G-alpha,HMMSmart_SM00275,superfamily_P-loop containing nucleoside triphosphate hydrolases
TH1L	51497	genome.wustl.edu	37	20	57561836	57561836	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198976.1	+1	reviewed	p.E77D	1.000	246	0%	350	30.9%	29	44.8%	probably_damaging(0.996)	tolerated(0.07)	deleterious(0.780)	HMMPfam_TH1
SYCP2	10388	genome.wustl.edu	37	20	58439413	58439413	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014258.2	-1	reviewed	p.E1516*	1.000	200	0%	79	21.5%	0	-	-	-	-	NULL
SYCP2	10388	genome.wustl.edu	37	20	58452478	58452478	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014258.2	-1	reviewed	p.E1038*	1.000	165	0%	111	31.5%	0	-	-	-	-	NULL
SYCP2	10388	genome.wustl.edu	37	20	58461789	58461789	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014258.2	-1	reviewed	p.R822I	1.000	323	0.3%	171	24.6%	0	-	possibly_damaging(0.733)	deleterious(0.02)	deleterious(0.651)	NULL
SYCP2	10388	genome.wustl.edu	37	20	58467092	58467092	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014258.2	-1	reviewed	p.E773*	0.004	262	0%	156	28.8%	0	-	-	-	-	NULL
SYCP2	10388	genome.wustl.edu	37	20	58495519	58495519	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014258.2	-1	reviewed	p.H64	0.160	254	0%	195	36.4%	0	-	-	-	-	NULL
CDH26	60437	genome.wustl.edu	37	20	58567505	58567505	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_177980.2	+1	reviewed	p.E452D	0.006	174	0%	217	36.4%	2	0%	possibly_damaging(0.906)	tolerated(0.06)	deleterious(0.682)	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
TAF4	6874	genome.wustl.edu	37	20	60575222	60575222	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003185.3	-1	reviewed	p.E915D	0.866	197	0%	331	27.5%	5	20%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_TAF4,superfamily_Histone-fold
GTPBP5	26164	genome.wustl.edu	37	20	60772993	60772993	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015666.3	+1	validated	p.F146	0.319	88	0%	144	26.4%	12	8.3%	-	-	-	HMMPfam_GTP1_OBG,superfamily_GTP1_OBG_sub
GTPBP5	26164	genome.wustl.edu	37	20	60775836	60775836	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015666.3	+1	validated	p.F308	0.880	45	0%	70	32.9%	19	15.7%	-	-	-	HMMPfam_MMR_HSR1,superfamily_SSF52540
OSBPL2	9885	genome.wustl.edu	37	20	60854239	60854239	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144498.1	+1	reviewed	p.S173L	0.999	98	0%	184	29.9%	19	52.6%	benign(0.036)	deleterious(0.01)	neutral(0.408)	HMMPfam_Oxysterol_BP
RPS21	6227	genome.wustl.edu	37	20	60962906	60962906	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001024.3	+1	reviewed	p.K41T	1.000	174	0%	356	35.4%	5811	36.1%	benign(0.031)	tolerated(0.13)	neutral(0.254)	HMMPfam_Ribosomal_S21e
RPS21	6227	genome.wustl.edu	37	20	60963564	60963564	+	Nonstop_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000337102	+1	known	p.*97Q	0.000	177	0%	347	32.6%	643	44.9%	-	-	-	NULL
C20orf151	140893	genome.wustl.edu	37	20	60991230	60991230	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080833.2	-1	validated	p.R126W	0.001	80	0%	74	33.8%	1	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	NULL
C20orf20	55257	genome.wustl.edu	37	20	61429987	61429987	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018270.4	+1	validated	p.L107I	1.000	165	0%	325	34.8%	14	21.4%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_CT20
OGFR	11054	genome.wustl.edu	37	20	61440944	61440944	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007346.2	+1	reviewed	p.F109L	0.991	55	0%	61	41%	54	31.4%	benign(0)	tolerated(0.75)	neutral(0.002)	HMMPfam_OGFr_N
TCFL5	10732	genome.wustl.edu	37	20	61485378	61485378	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006602.2	-1	validated	p.S457Y	0.669	105	0%	246	33.7%	6	16.6%	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
TCFL5	10732	genome.wustl.edu	37	20	61488919	61488919	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006602.2	-1	validated	p.R356*	0.600	149	0%	225	31.6%	4	25%	-	-	-	NULL
DIDO1	11083	genome.wustl.edu	37	20	61511407	61511407	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033081.1	-1	reviewed	p.F1967	0.985	33	0%	39	43.6%	10	50%	-	-	-	NULL
DIDO1	11083	genome.wustl.edu	37	20	61527642	61527642	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033081.1	-1	reviewed	p.N719K	0.997	169	0%	338	32.2%	6	33.3%	probably_damaging(0.998)	deleterious(0.04)	deleterious(0.823)	HMMPfam_TFIIS_M,superfamily_Elongation factor TFIIS domain 2,HMMSmart_SM00510
DIDO1	11083	genome.wustl.edu	37	20	61527926	61527926	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033081.1	-1	reviewed	p.R671W	0.996	58	0%	68	26.5%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TFIIS_M,superfamily_Elongation factor TFIIS domain 2
ARFGAP1	55738	genome.wustl.edu	37	20	61909472	61909472	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175609.1	+1	reviewed	p.V149	0.001	152	0%	161	30.4%	50	40%	possibly_damaging(0.832)	tolerated(0.2)	neutral(0.366)	NULL
COL20A1	57642	genome.wustl.edu	37	20	61948043	61948043	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020882.2	+1	validated	p.S888I	1.000	41	0%	53	37.7%	0	-	probably_damaging(0.982)	deleterious(0.03)	deleterious(0.791)	HMMSmart_SM00210
EEF1A2	1917	genome.wustl.edu	37	20	62127262	62127262	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001958.2	-1	reviewed	p.D91N	1.000	207	0%	293	32.1%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_GTP_EFTU,superfamily_P-loop containing nucleoside triphosphate hydrolases
SRMS	6725	genome.wustl.edu	37	20	62172577	62172577	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080823.2	-1	provisional	p.E418K	1.000	67	0%	78	35.9%	14	57.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,superfamily_Kinase_like
SRMS	6725	genome.wustl.edu	37	20	62173895	62173895	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080823.2	-1	provisional	p.E229K	0.997	54	0%	82	75.6%	2	100%	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	superfamily_Kinase_like,superfamily_SSF55550
PRIC285	85441	genome.wustl.edu	37	20	62192602	62192602	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037335.2	-1	reviewed	p.R2327W	0.000	61	0%	91	29.7%	12	41.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_P-loop containing nucleoside triphosphate hydrolases
RTEL1	51750	genome.wustl.edu	37	20	62319311	62319311	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032957.3	+1	reviewed	p.E501D	1.000	34	0%	94	33%	9	66.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
UCKL1	54963	genome.wustl.edu	37	20	62577254	62577254	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017859.2	-1	validated	p.F162	0.883	349	0%	760	34.6%	45	48.8%	-	-	-	HMMPfam_PRK,superfamily_P-loop containing nucleoside triphosphate hydrolases
NPBWR2	2832	genome.wustl.edu	37	20	62737332	62737332	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005286.2	-1	reviewed	p.T285A	1.000	86	0%	126	33.3%	0	-	benign(0.046)	tolerated(0.12)	neutral(0.263)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
NPBWR2	2832	genome.wustl.edu	37	20	62738053	62738053	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005286.2	-1	reviewed	p.L44	0.996	45	0%	59	23.7%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
MYT1	4661	genome.wustl.edu	37	20	62837141	62837141	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004535.2	+1	reviewed	p.E129K	0.370	54	0%	97	35.1%	0	-	benign(0.055)	tolerated(0.38)	neutral(0.021)	NULL
PCMTD2	55251	genome.wustl.edu	37	20	62891426	62891426	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018257.2	+1	validated	p.I36	0.609	81	1.2%	83	30.1%	16	50%	-	-	-	HMMPfam_PCMT,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
TPTE	7179	genome.wustl.edu	37	21	10906959	10906959	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199261.2	-1	validated	p.E534D	0.108	558	0%	619	13.9%	0	-	possibly_damaging(0.484)	tolerated(0.05)	deleterious(0.506)	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2
TPTE	7179	genome.wustl.edu	37	21	10906987	10906987	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199261.2	-1	validated	p.R525I	0.884	544	0.2%	568	12%	0	-	benign(0.215)	deleterious(0)	neutral(0.466)	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PTEN_C2
TPTE	7179	genome.wustl.edu	37	21	10921992	10921992	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199261.2	-1	validated	p.R344I	0.957	202	0%	330	12.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	PatternScan_TYR_PHOSPHATASE_1,superfamily_(Phosphotyrosine protein) phosphatases II
TPTE	7179	genome.wustl.edu	37	21	10934966	10934966	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199261.2	-1	validated	p.R276Q	0.567	603	0%	921	13.2%	0	-	benign(0.008)	tolerated(0.37)	neutral(0.019)	superfamily_(Phosphotyrosine protein) phosphatases II
TPTE	7179	genome.wustl.edu	37	21	10942768	10942768	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199261.2	-1	validated	p.E225*	1.000	668	0%	831	14.7%	0	-	-	-	-	superfamily_Voltage-gated potassium channels
TPTE	7179	genome.wustl.edu	37	21	10952957	10952957	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199261.2	-1	validated	p.K80N	0.001	245	0%	295	16.9%	0	-	probably_damaging(0.954)	tolerated(0.12)	deleterious(0.658)	superfamily_Voltage-gated potassium channels
LIPI	149998	genome.wustl.edu	37	21	15561494	15561494	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198996.2	-1	validated	p.R119M	0.001	194	0%	200	32%	0	-	benign(0.116)	deleterious(0.03)	neutral(0.373)	HMMPfam_Lipase,superfamily_SSF53474
SAMSN1	64092	genome.wustl.edu	37	21	15882775	15882775	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022136.3	-1	validated	p.I139M	0.590	92	0%	140	21.4%	1	0%	possibly_damaging(0.613)	tolerated(0.27)	neutral(0.246)	superfamily_SH3-domain
NRIP1	8204	genome.wustl.edu	37	21	16337367	16337367	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003489.3	-1	reviewed	p.A1049	0.098	237	0%	221	34.4%	3	66.6%	-	-	-	NULL
NRIP1	8204	genome.wustl.edu	37	21	16339425	16339425	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003489.3	-1	reviewed	p.K363N	1.000	171	0%	173	37%	2	0%	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	NULL
NRIP1	8204	genome.wustl.edu	37	21	16339598	16339598	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003489.3	-1	reviewed	p.E306*	1.000	138	0%	161	32.3%	0	-	-	-	-	NULL
USP25	29761	genome.wustl.edu	37	21	17163915	17163915	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013396.3	+1	validated	p.R163	1.000	356	0%	194	20.1%	5	20%	-	-	-	superfamily_Cysteine proteinases
USP25	29761	genome.wustl.edu	37	21	17250136	17250136	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013396.3	+1	validated	p.E941*	1.000	208	0%	234	32.1%	14	28.5%	-	-	-	NULL
BTG3	10950	genome.wustl.edu	37	21	18970966	18970966	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130914.1	-1	reviewed	p.S207L	0.003	186	0%	140	38.6%	89	41.5%	benign(0)	tolerated(0.13)	neutral(0.253)	NULL
BTG3	10950	genome.wustl.edu	37	21	18977179	18977179	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001130914.1	-1	reviewed	p.R104G	1.000	111	0%	151	27.8%	83	39.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_BTG,HMMSmart_SM00099
CHODL	140578	genome.wustl.edu	37	21	19638448	19638448	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000338326	+1	known	p.K230T	0.998	54	0%	61	32.8%	1	0%	unknown(0)	-	-	NULL
TMPRSS15	5651	genome.wustl.edu	37	21	19732165	19732165	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002772.2	-1	reviewed	p.L263	0.999	83	0%	31	35.5%	0	-	-	-	-	HMMPfam_CUB,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain
NCAM2	4685	genome.wustl.edu	37	21	22656537	22656537	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004540.2	+1	reviewed	p.D52Y	1.000	199	0%	142	26.8%	0	-	probably_damaging(0.995)	deleterious(0.03)	deleterious(0.822)	HMMSmart_IGc2,HMMPfam_I-set,superfamily_SSF48726
NCAM2	4685	genome.wustl.edu	37	21	22910222	22910222	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004540.2	+1	reviewed	p.E820*	1.000	62	0%	54	31.5%	1	0%	-	-	-	NULL
APP	351	genome.wustl.edu	37	21	27348303	27348303	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000448850	-1	known	p.E324*	1.000	330	0%	478	33.7%	451	39.4%	unknown(0)	tolerated(0.11)	-	superfamily_CAPPD an extracellular domain of amyloid beta A4 protein
CYYR1	116159	genome.wustl.edu	37	21	27945215	27945215	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052954.2	-1	validated	p.P15	0.985	22	0%	40	15%	3	0%	-	-	-	NULL
ADAMTS5	11096	genome.wustl.edu	37	21	28296606	28296606	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007038.3	-1	reviewed	p.K853N	0.820	192	0%	251	34.7%	0	-	benign(0.419)	tolerated(0.19)	neutral(0.185)	NULL
ADAMTS5	11096	genome.wustl.edu	37	21	28304487	28304487	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007038.3	-1	reviewed	p.R629C	1.000	175	0%	207	31.9%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
LTN1	26046	genome.wustl.edu	37	21	30302787	30302787	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015565.2	-1	validated	p.R1762C	1.000	145	0%	164	34.8%	5	40%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00744,superfamily_RING/U-box
LTN1	26046	genome.wustl.edu	37	21	30358476	30358476	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015565.2	-1	validated	p.F110C	1.000	111	0%	129	28.7%	1	100%	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	superfamily_ARM repeat
USP16	10600	genome.wustl.edu	37	21	30411452	30411452	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001032410.1	+1	reviewed	p.E280*	1.000	75	0%	93	28%	4	0%	-	-	-	HMMPfam_UCH,superfamily_Cysteine proteinases
CCT8	10694	genome.wustl.edu	37	21	30432865	30432865	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000432178	-1	known	p.S81P	1.000	121	0%	196	30.1%	464	48%	-	-	-	HMMPfam_Cpn60_TCP1,superfamily_GroEL equatorial domain-like
C21orf7	56911	genome.wustl.edu	37	21	30547197	30547197	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020152.2	+1	provisional	p.R238M	1.000	115	0%	223	36.3%	4	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
BACH1	571	genome.wustl.edu	37	21	30698986	30698986	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001186.2	+1	reviewed	p.E281K	0.714	48	0%	107	27.1%	2	0%	benign(0.244)	tolerated(0.17)	neutral(0.083)	NULL
GRIK1	2897	genome.wustl.edu	37	21	30963546	30963546	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000830.3	-1	reviewed	e10-1	1.000	181	0%	235	30.2%	0	-	-	-	-	-
GRIK1	2897	genome.wustl.edu	37	21	31066253	31066253	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000830.3	-1	reviewed	p.R83I	1.000	241	0%	355	32.7%	0	-	benign(0.408)	tolerated(0.25)	neutral(0.169)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRIK1	2897	genome.wustl.edu	37	21	31311717	31311717	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000830.3	-1	reviewed	p.P34	1.000	114	0%	209	32.1%	0	-	-	-	-	superfamily_Periplasmic binding protein-like I
KRTAP25-1	100131902	genome.wustl.edu	37	21	31661636	31661636	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128598.1	-1	validated	p.S58Y	0.000	144	0%	144	35.4%	0	-	benign(0.001)	-	-	NULL
KRTAP27-1	643812	genome.wustl.edu	37	21	31709457	31709457	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001077711.1	-1	provisional	p.V177A	0.001	125	0%	127	33.1%	0	-	benign(0.147)	tolerated(0.17)	neutral(0.072)	HMMPfam_PMG
KRTAP13-2	337959	genome.wustl.edu	37	21	31720614	31720614	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000448917	-1	known	p.G89*	0.252	138	0%	159	30.2%	0	-	-	-	-	HMMPfam_PMG
KRTAP13-3	337960	genome.wustl.edu	37	21	31797995	31797995	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181622.1	-1	provisional	p.S79Y	0.639	167	0%	198	38.4%	0	-	-	-	-	HMMPfam_PMG
KRTAP19-3	337970	genome.wustl.edu	37	21	31864264	31864264	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181609.3	-1	validated	p.Y4	0.001	298	0%	396	37.1%	0	-	-	-	-	NULL
KRTAP19-5	337972	genome.wustl.edu	37	21	31874259	31874259	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181611.1	-1	provisional	p.F50	0.011	182	0%	205	37.6%	0	-	-	-	-	NULL
KRTAP6-3	337968	genome.wustl.edu	37	21	31964943	31964943	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181605.3	+1	validated	p.G60D	0.001	496	0%	535	34.2%	0	-	unknown(0)	-	-	NULL
KRTAP20-1	337975	genome.wustl.edu	37	21	31988915	31988915	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181615.1	+1	provisional	p.G48*	0.636	597	0%	650	30.9%	0	-	-	-	-	NULL
KRTAP11-1	337880	genome.wustl.edu	37	21	32253404	32253404	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_175858.2	-1	validated	p.V147A	0.051	65	0%	92	30.4%	0	-	benign(0.004)	deleterious(0.03)	neutral(0.364)	HMMPfam_PMG
TIAM1	7074	genome.wustl.edu	37	21	32598178	32598178	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003253.2	-1	validated	p.D558G	1.000	233	0%	412	35%	2	0%	possibly_damaging(0.939)	tolerated(0.29)	neutral(0.414)	NULL
TIAM1	7074	genome.wustl.edu	37	21	32598195	32598195	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003253.2	-1	validated	p.R552	0.030	229	0%	402	35.8%	1	0%	-	-	-	superfamily_SSF50729
SCAF4	57466	genome.wustl.edu	37	21	33057405	33057405	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020706.2	-1	reviewed	p.T815	0.999	99	0%	163	24.5%	53	45.2%	-	-	-	NULL
SCAF4	57466	genome.wustl.edu	37	21	33076135	33076135	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020706.2	-1	reviewed	p.F88L	1.000	160	0%	181	23.8%	8	25%	unknown(0)	deleterious(0)	-	HMMSmart_SM00582,HMMPfam_DUF618,superfamily_ENTH/VHS domain
HUNK	30811	genome.wustl.edu	37	21	33296971	33296971	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014586.1	+1	validated	p.K151N	0.999	61	0%	60	30%	5	100%	probably_damaging(0.992)	tolerated(0.11)	deleterious(0.719)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
URB1	9875	genome.wustl.edu	37	21	33717857	33717857	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014825.2	-1	validated	p.R1299M	1.000	54	0%	87	28.7%	6	33.3%	probably_damaging(0.955)	deleterious(0.01)	deleterious(0.804)	NULL
C21orf63	59271	genome.wustl.edu	37	21	33887347	33887347	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_058187.3	+1	validated	p.S391	0.000	146	0%	238	30.7%	11	0%	-	-	-	NULL
IFNAR1	3454	genome.wustl.edu	37	21	34721515	34721515	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000629.2	+1	reviewed	p.Y303D	0.029	121	0%	235	27.2%	15	33.3%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	superfamily_Fibronectin type III
IFNGR2	3460	genome.wustl.edu	37	21	34809262	34809262	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005534.3	+1	reviewed	p.T336M	0.000	51	0%	109	25.7%	109	34.8%	possibly_damaging(0.899)	deleterious(0.01)	deleterious(0.762)	NULL
DNAJC28	54943	genome.wustl.edu	37	21	34860956	34860956	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040192.1	-1	validated	p.D249N	1.000	205	0%	397	34.5%	2	50%	possibly_damaging(0.713)	deleterious(0)	deleterious(0.702)	HMMPfam_DUF1992
DNAJC28	54943	genome.wustl.edu	37	21	34861073	34861073	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001040192.1	-1	validated	p.E210*	1.000	209	0%	389	36.2%	2	50%	-	-	-	HMMPfam_DUF1992
GART	2618	genome.wustl.edu	37	21	34889728	34889728	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000819.4	-1	reviewed	p.I630	0.992	156	0%	311	30.9%	32	37.5%	-	-	-	HMMPfam_AIRS_C,superfamily_PurM C-terminal domain-like
GART	2618	genome.wustl.edu	37	21	34903815	34903815	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000819.4	-1	reviewed	p.L193F	1.000	123	0%	166	30.1%	24	41.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GARS_A,superfamily_Glutathione synthetase ATP-binding domain-like
SON	6651	genome.wustl.edu	37	21	34922580	34922580	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138927.1	+1	reviewed	p.S348L	0.028	118	0%	166	30.1%	7	28.5%	benign(0.012)	tolerated(0.08)	neutral(0.300)	NULL
DONSON	29980	genome.wustl.edu	37	21	34953718	34953718	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017613.2	-1	reviewed	p.F414V	1.000	119	0%	217	37.8%	18	61.1%	probably_damaging(1)	tolerated(0.08)	deleterious(0.800)	NULL
CRYZL1	9946	genome.wustl.edu	37	21	34963498	34963498	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145858.2	-1	reviewed	p.V307G	1.000	167	0%	359	35.4%	14	28.5%	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	superfamily_NAD(P)-binding Rossmann-fold domains
CRYZL1	9946	genome.wustl.edu	37	21	34969630	34969630	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145858.2	-1	reviewed	p.L252I	1.000	294	0%	546	28.4%	14	14.2%	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	superfamily_NAD(P)-binding Rossmann-fold domains
ITSN1	6453	genome.wustl.edu	37	21	35169761	35169761	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003024.2	+1	reviewed	p.H677	0.048	169	0%	383	28.7%	18	44.4%	-	-	-	NULL
ITSN1	6453	genome.wustl.edu	37	21	35202043	35202043	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003024.2	+1	reviewed	p.E1115	1.000	254	0%	418	21.5%	6	16.6%	-	-	-	HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH3-domain
RUNX1	861	genome.wustl.edu	37	21	36259146	36259146	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001754.4	-1	reviewed	p.A115	0.998	47	0%	52	34.6%	14	28.5%	-	-	-	superfamily_p53-like transcription factors,HMMPfam_Runt
SETD4	54093	genome.wustl.edu	37	21	37412940	37412940	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017438.3	-1	validated	p.G333R	1.000	114	0%	228	39.5%	4	25%	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Rubis-subs-bind
SETD4	54093	genome.wustl.edu	37	21	37416218	37416218	+	Missense_Mutation	SNP	C	C	T	rs146928359	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017438.3	-1	validated	p.E255K	1.000	109	0%	242	30.6%	26	38.4%	possibly_damaging(0.827)	deleterious(0.02)	deleterious(0.697)	HMMPfam_SET,superfamily_SET domain
DOPEY2	9980	genome.wustl.edu	37	21	37618922	37618922	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005128.2	+1	validated	p.N1548	0.898	40	0%	79	38%	7	14.2%	-	-	-	NULL
MORC3	23515	genome.wustl.edu	37	21	37713713	37713713	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015358.2	+1	reviewed	p.E209*	1.000	87	0%	205	32.7%	1	0%	-	-	-	superfamily_ATP_bd_ATPase
MORC3	23515	genome.wustl.edu	37	21	37713755	37713755	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015358.2	+1	reviewed	p.E223K	0.997	137	0%	348	35.1%	2	50%	benign(0.273)	tolerated(0.51)	neutral(0.038)	superfamily_ATP_bd_ATPase
MORC3	23515	genome.wustl.edu	37	21	37741863	37741863	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015358.2	+1	reviewed	p.E733*	0.996	75	0%	180	32.2%	2	0%	-	-	-	NULL
PIGP	51227	genome.wustl.edu	37	21	38438000	38438000	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153681.2	-1	reviewed	p.K120T	0.846	264	0%	414	37.7%	42	35.7%	benign(0.167)	tolerated(0.3)	neutral(0.043)	HMMPfam_PIG-P
TTC3	7267	genome.wustl.edu	37	21	38536450	38536450	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001894.1	+1	validated	p.E1090K	0.001	148	0%	187	35.8%	28	57.1%	possibly_damaging(0.882)	deleterious(0)	deleterious(0.789)	superfamily_Spectrin,superfamily_SSF48452
TTC3	7267	genome.wustl.edu	37	21	38538230	38538230	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001894.1	+1	validated	p.K1238	0.000	102	0%	78	44.9%	44	38.6%	-	-	-	superfamily_Spectrin,superfamily_SSF48452
TTC3	7267	genome.wustl.edu	37	21	38545016	38545016	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001894.1	+1	validated	p.E1529D	0.984	99	0%	184	32.1%	32	40.6%	benign(0.098)	deleterious(0)	neutral(0.452)	superfamily_Spectrin,superfamily_SSF48452
TTC3	7267	genome.wustl.edu	37	21	38564453	38564453	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001894.1	+1	validated	p.S1719Y	0.051	207	0%	292	36%	42	33.3%	possibly_damaging(0.805)	deleterious(0.01)	deleterious(0.709)	NULL
DSCR3	10311	genome.wustl.edu	37	21	38600650	38600650	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000309117	-1	known	p.L178I	0.993	89	0%	125	40.8%	11	36.3%	benign(0)	tolerated(1)	-	HMMPfam_Vps26
DYRK1A	1859	genome.wustl.edu	37	21	38862744	38862744	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001396.3	+1	reviewed	p.S311Y	1.000	119	0%	149	30.2%	9	22.2%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
KCNJ6	3763	genome.wustl.edu	37	21	39086614	39086614	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002240.2	-1	reviewed	p.E282D	1.000	117	0%	158	36.1%	0	-	possibly_damaging(0.908)	deleterious(0.02)	deleterious(0.744)	HMMPfam_IRK,superfamily_Ig_E-set
FLJ45139	400867	genome.wustl.edu	37	21	40250436	40250436	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_078571.1	-1	model	NULL	0.000	72	0%	102	33.3%	0	-	-	-	-	-
BRWD1	54014	genome.wustl.edu	37	21	40569156	40569156	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018963.3	-1	reviewed	p.D1947Y	0.908	147	0%	147	33.3%	4	25%	possibly_damaging(0.908)	deleterious(0)	deleterious(0.806)	superfamily_WD40 repeat-like
BRWD1	54014	genome.wustl.edu	37	21	40571465	40571465	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018963.3	-1	reviewed	p.R1626Q	0.986	92	0%	118	35.6%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_WD40 repeat-like
BRWD1	54014	genome.wustl.edu	37	21	40590106	40590106	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018963.3	-1	reviewed	p.R1211*	1.000	143	0%	270	36.3%	0	-	-	-	-	HMMPfam_Bromodomain,HMMSmart_SM00297,superfamily_Bromodomain,superfamily_WD40 repeat-like
BRWD1	54014	genome.wustl.edu	37	21	40608671	40608671	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000455867	-1	known	p.G540R	0.059	179	0%	297	37%	2	100%	-	-	-	NULL
LCA5L	150082	genome.wustl.edu	37	21	40778020	40778020	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152505.3	-1	validated	p.E601*	1.000	183	0%	280	31.8%	0	-	-	-	-	NULL
LCA5L	150082	genome.wustl.edu	37	21	40781999	40781999	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152505.3	-1	validated	p.I396	0.000	466	0.2%	643	31.6%	0	-	-	-	-	NULL
LCA5L	150082	genome.wustl.edu	37	21	40800118	40800118	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152505.3	-1	validated	p.S101Y	0.000	47	0%	40	32.5%	1	100%	probably_damaging(0.961)	deleterious(0.04)	deleterious(0.753)	NULL
SH3BGR	6450	genome.wustl.edu	37	21	40847091	40847091	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007341.2	+1	validated	p.E151K	1.000	276	0%	308	32.8%	4	25%	benign(0.396)	tolerated(0.47)	neutral(0.138)	HMMPfam_SH3BGR,superfamily_Thiordxn-like_fd
B3GALT5	10317	genome.wustl.edu	37	21	41032583	41032583	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006057.1	+1	reviewed	p.E33*	0.001	253	0%	372	36%	0	-	-	-	-	NULL
PCP4	5121	genome.wustl.edu	37	21	41270431	41270431	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006198.2	+1	validated	p.D14Y	1.000	234	0%	383	26.6%	10	40%	unknown(0)	-	-	NULL
DSCAM	1826	genome.wustl.edu	37	21	41414598	41414598	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001389.3	-1	validated	p.R1796*	1.000	176	0%	291	41.9%	0	-	-	-	-	NULL
DSCAM	1826	genome.wustl.edu	37	21	41446967	41446967	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001389.3	-1	validated	p.R1629*	0.109	114	0%	152	27%	0	-	-	-	-	NULL
DSCAM	1826	genome.wustl.edu	37	21	41450636	41450636	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001389.3	-1	validated	p.F1563	0.998	130	0%	162	29%	0	-	-	-	-	NULL
DSCAM	1826	genome.wustl.edu	37	21	41711087	41711087	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001389.3	-1	validated	p.S489L	1.000	176	0%	257	38.1%	0	-	benign(0.018)	tolerated(0.13)	neutral(0.253)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
MX2	4600	genome.wustl.edu	37	21	42778876	42778876	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002463.1	+1	reviewed	p.S619L	0.000	143	0%	250	32%	4	25%	benign(0)	deleterious(0.03)	neutral(0.364)	HMMPfam_GED,HMMSmart_GED
LOC100288232	100288232	genome.wustl.edu	37	21	43279352	43279352	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343752.1	+1	model	p.E544*	0.000	27	0%	37	37.8%	0	-	-	-	-	NULL
ZNF295	49854	genome.wustl.edu	37	21	43411021	43411021	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098402.1	-1	validated	p.E1062K	1.000	177	0%	298	34.2%	4	75%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ZNF295	49854	genome.wustl.edu	37	21	43412720	43412720	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098402.1	-1	validated	p.K495N	0.997	225	0%	334	36.5%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
ZNF295-AS1	150142	genome.wustl.edu	37	21	43444555	43444555	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_027273.1	+1	validated	NULL	0.000	368	0%	573	31.4%	0	-	-	-	-	-
UMODL1	89766	genome.wustl.edu	37	21	43533760	43533760	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173568.3	+1	validated	p.A856S	0.000	116	0%	134	36.6%	0	-	benign(0.156)	tolerated(0.29)	neutral(0.043)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
UMODL1	89766	genome.wustl.edu	37	21	43547182	43547182	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173568.3	+1	validated	p.I1248	0.718	122	0%	212	34.9%	0	-	-	-	-	HMMPfam_Zona_pellucida,HMMSmart_SM00241
ABCG1	9619	genome.wustl.edu	37	21	43702515	43702515	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004915.3	+1	reviewed	p.F240	0.944	48	0%	62	35.5%	22	27.2%	-	-	-	HMMPfam_ABC_tran,HMMSmart_SM00382,superfamily_P-loop containing nucleoside triphosphate hydrolases
TMPRSS3	64699	genome.wustl.edu	37	21	43809147	43809147	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024022.2	-1	reviewed	p.F71	0.999	56	0%	103	27.2%	1	100%	-	-	-	superfamily_LDL receptor-like module
UBASH3A	53347	genome.wustl.edu	37	21	43829550	43829550	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018961.2	+1	validated	p.D63Y	1.000	166	0%	219	34.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_UBA-like
PDE9A	5152	genome.wustl.edu	37	21	44151908	44151908	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002606.2	+1	reviewed	p.S97	0.003	45	0%	87	34.5%	0	-	-	-	-	NULL
PDE9A	5152	genome.wustl.edu	37	21	44182324	44182324	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002606.2	+1	reviewed	p.P406H	0.013	83	0%	130	33.1%	5	40%	benign(0.066)	tolerated(0.11)	neutral(0.276)	HMMPfam_PDEase_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like
PDE9A	5152	genome.wustl.edu	37	21	44185540	44185540	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002606.2	+1	reviewed	p.I431S	0.998	112	0%	275	38.5%	5	20%	benign(0.271)	deleterious(0)	deleterious(0.474)	HMMPfam_PDEase_I,HMMSmart_SM00471,superfamily_HD-domain/PDEase-like
CBS	875	genome.wustl.edu	37	21	44474094	44474094	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000071.2	-1	reviewed	e15-1	1.000	31	0%	39	23.1%	0	-	-	-	-	-
CRYAA	1409	genome.wustl.edu	37	21	44592283	44592283	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000394.2	+1	reviewed	p.L139M	1.000	62	0%	84	35.7%	0	-	possibly_damaging(0.446)	deleterious(0.01)	deleterious(0.551)	HMMPfam_HSP20,superfamily_HSP20-like chaperones
TRAPPC10	7109	genome.wustl.edu	37	21	45509781	45509781	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003274.4	+1	reviewed	p.R946M	1.000	115	0%	147	38.1%	13	38.4%	possibly_damaging(0.691)	tolerated(0.16)	neutral(0.307)	NULL
C21orf33	8209	genome.wustl.edu	37	21	45563143	45563143	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004649.6	+1	reviewed	p.T193N	1.000	46	0%	75	30.7%	65	35.3%	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_DJ-1_PfpI,superfamily_Class I glutamine amidotransferase-like
TRPM2	7226	genome.wustl.edu	37	21	45820197	45820197	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003307.3	+1	reviewed	p.R755H	0.996	58	0%	77	31.2%	0	-	possibly_damaging(0.915)	deleterious(0.05)	deleterious(0.712)	NULL
TRPM2	7226	genome.wustl.edu	37	21	45825817	45825817	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003307.3	+1	reviewed	p.R896H	0.992	30	0%	50	24%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Ion_trans
LRRC3	81543	genome.wustl.edu	37	21	45876782	45876782	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030891.3	+1	validated	p.Q85	1.000	18	0%	30	33.3%	0	-	-	-	-	superfamily_SSF52058
KRTAP10-6	386674	genome.wustl.edu	37	21	46011869	46011869	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198688.2	-1	validated	p.S166F	0.030	236	0%	331	33.2%	0	-	unknown(0)	deleterious(0.01)	-	NULL
KRTAP10-7	386675	genome.wustl.edu	37	21	46020568	46020568	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000380102	+1	known	p.G16D	0.001	174	0%	229	34.9%	0	-	probably_damaging(0.998)	tolerated(0.07)	deleterious(0.793)	NULL
KRTAP10-11	386678	genome.wustl.edu	37	21	46066567	46066567	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198692.2	+1	validated	p.P64	0.995	125	0%	139	36.7%	0	-	-	-	-	HMMPfam_Keratin_B2
KRTAP10-12	386685	genome.wustl.edu	37	21	46117708	46117708	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198699.1	+1	provisional	p.L198I	0.981	151	0%	181	32%	0	-	unknown(0)	tolerated(0.31)	-	HMMPfam_Keratin_B2
SUMO3	6612	genome.wustl.edu	37	21	46229001	46229001	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006936.2	-1	validated	p.F61	1.000	159	0%	240	38.8%	104	28.8%	-	-	-	HMMPfam_ubiquitin,HMMSmart_SM00213,superfamily_Ubiquitin-like
LINC00315	246704	genome.wustl.edu	37	21	46724408	46724408	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_041771.1	-1	model	NULL	0.012	56	0%	64	34.4%	0	-	-	-	-	-
COL18A1	80781	genome.wustl.edu	37	21	46888301	46888301	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130444.2	+1	reviewed	p.F499	0.345	58	0%	57	21.1%	47	12.7%	-	-	-	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases
COL18A1	80781	genome.wustl.edu	37	21	46900006	46900006	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130444.2	+1	reviewed	p.R860I	0.275	40	0%	51	39.2%	61	6.5%	unknown(0)	tolerated(0.23)	-	NULL
PCBP3	54039	genome.wustl.edu	37	21	47350749	47350749	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020528.2	+1	reviewed	p.G282	1.000	93	0%	137	33.6%	4	0%	-	-	-	superfamily_Eukaryotic type KH-domain (KH-domain type I)
COL6A1	1291	genome.wustl.edu	37	21	47423750	47423750	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001848.2	+1	reviewed	p.F970	1.000	6	0.000	8	0.500	270	0.3%	-	-	-	HMMPfam_VWA,HMMSmart_VWA,superfamily_SSF53300
COL6A2	1292	genome.wustl.edu	37	21	47542437	47542437	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001849.3	+1	reviewed	p.G534S	0.994	55	0%	88	28.4%	338	0%	unknown(0)	deleterious(0)	-	HMMPfam_Collagen
COL6A2	1292	genome.wustl.edu	37	21	47545947	47545947	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001849.3	+1	reviewed	p.D740N	0.812	33	0%	38	39.5%	778	0%	benign(0.019)	-	-	HMMPfam_VWA,HMMSmart_SM00327,superfamily_vWA-like
FTCD	10841	genome.wustl.edu	37	21	47557228	47557228	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000355384	-1	known	p.D474N	0.995	85	0%	120	35%	0	-	unknown(0)	-	-	NULL
MCM3AP	8888	genome.wustl.edu	37	21	47663377	47663377	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003906.3	-1	reviewed	e24+2	0.996	28	0%	50	42%	2	100%	-	-	-	-
MCM3AP	8888	genome.wustl.edu	37	21	47663440	47663440	+	Silent	SNP	G	G	A	rs139383180	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003906.3	-1	reviewed	p.I1745	0.009	46	0%	79	40.5%	24	0%	-	-	-	NULL
PCNT	5116	genome.wustl.edu	37	21	47801681	47801681	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006031.5	+1	reviewed	p.A1080T	0.002	147	0%	255	37.6%	3	0%	benign(0.009)	tolerated(0.29)	neutral(0.030)	NULL
LOC729057	729057	genome.wustl.edu	37	22	16123396	16123396	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_042044.2	+1	model	NULL	0.997	97	0%	114	13.2%	0	-	-	-	-	-
LOC729057	729057	genome.wustl.edu	37	22	16123499	16123499	+	RNA	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_042044.2	+1	model	NULL	0.460	168	0%	168	11.9%	0	-	-	-	-	-
POTEH	23784	genome.wustl.edu	37	22	16269931	16269931	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136213.1	-1	provisional	p.K417T	0.008	665	0%	858	9.7%	0	-	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
OR11H1	81061	genome.wustl.edu	37	22	16449562	16449562	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005239.1	-1	provisional	p.F81	1.000	444	0%	492	9.8%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
GAB4	128954	genome.wustl.edu	37	22	17445707	17445707	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037814.1	-1	provisional	p.Q475H	1.000	468	0%	861	33.4%	0	-	unknown(0)	deleterious(0.01)	-	NULL
GAB4	128954	genome.wustl.edu	37	22	17447056	17447056	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037814.1	-1	provisional	p.D408Y	1.000	59	0%	109	32.1%	0	-	unknown(0)	deleterious(0.05)	-	NULL
GAB4	128954	genome.wustl.edu	37	22	17447170	17447170	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037814.1	-1	provisional	p.P370S	0.336	51	0%	74	28.4%	0	-	unknown(0)	tolerated(0.51)	-	NULL
GAB4	128954	genome.wustl.edu	37	22	17473061	17473061	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037814.1	-1	provisional	p.W60C	1.000	119	0.8%	141	29.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
CECR1	51816	genome.wustl.edu	37	22	17662787	17662787	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017424.2	-1	reviewed	p.F455L	1.000	84	0%	191	24.1%	5	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_A_deaminase,superfamily_SSF51556
LOC100288065	100288065	genome.wustl.edu	37	22	18066146	18066146	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344192.1	-1	model	p.R149	0.000	66	0%	153	36.6%	0	-	-	-	-	NULL
ATP6V1E1	529	genome.wustl.edu	37	22	18082825	18082825	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001696.3	-1	reviewed	p.R135C	0.995	26	0%	62	27.4%	150	32%	benign(0.2)	deleterious(0)	neutral(0.464)	HMMPfam_vATP-synt_E
BID	637	genome.wustl.edu	37	22	18222118	18222118	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_197966.1	-1	reviewed	p.E166D	0.130	52	0%	52	42.3%	30	40%	possibly_damaging(0.867)	deleterious(0.03)	deleterious(0.701)	HMMPfam_BID,superfamily_SSF56854
MICAL3	57553	genome.wustl.edu	37	22	18305776	18305776	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015241.2	-1	provisional	p.E1082K	1.000	222	0%	276	36.2%	3	33.3%	benign(0.077)	deleterious(0)	neutral(0.450)	NULL
DGCR2	9993	genome.wustl.edu	37	22	19050756	19050756	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005137.2	-1	reviewed	p.R195Q	1.000	73	0%	228	37.3%	43	44.1%	probably_damaging(1)	tolerated(0.3)	deleterious(0.528)	HMMSmart_CLECT,superfamily_C-type_lectin_fold
TSSK2	23617	genome.wustl.edu	37	22	19118945	19118945	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053006.4	+1	validated	p.G11	1.000	16	0%	43	39.5%	5	20%	-	-	-	superfamily_Protein kinase-like (PK-like)
TSSK2	23617	genome.wustl.edu	37	22	19119793	19119793	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_053006.4	+1	validated	p.R294H	0.916	15	0%	42	42.9%	3	66.6%	benign(0.015)	tolerated(0.13)	neutral(0.253)	NULL
HIRA	7290	genome.wustl.edu	37	22	19319018	19319018	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003325.3	-1	reviewed	p.F1000C	1.000	43	0%	80	30%	57	45.6%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
HIRA	7290	genome.wustl.edu	37	22	19379724	19379724	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003325.3	-1	reviewed	p.K279I	1.000	97	0%	139	44.6%	15	53.3%	benign(0.345)	deleterious(0.02)	deleterious(0.492)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
C22orf39	128977	genome.wustl.edu	37	22	19431873	19431873	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173793.4	-1	validated	p.A78E	0.045	32	0%	35	48.6%	4	25%	benign(0.323)	tolerated(0.87)	neutral(0.102)	NULL
UFD1L	7353	genome.wustl.edu	37	22	19459280	19459280	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005659.6	-1	reviewed	p.S74L	1.000	84	0%	128	39.8%	119	31.9%	benign(0)	tolerated(0.15)	neutral(0.241)	HMMPfam_UFD1
CDC45	8318	genome.wustl.edu	37	22	19496119	19496119	+	Silent	SNP	C	C	T	rs184840047	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003504.3	+1	reviewed	p.S374	0.497	181	0%	283	31.8%	29	34.4%	-	-	-	HMMPfam_CDC45
CDC45	8318	genome.wustl.edu	37	22	19504166	19504166	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003504.3	+1	reviewed	p.K519N	1.000	82	0%	121	36.4%	30	33.3%	probably_damaging(0.994)	tolerated(0.07)	deleterious(0.771)	HMMPfam_CDC45
SEPT5	5413	genome.wustl.edu	37	22	19709370	19709370	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000438754	+1	known	p.R286C	0.997	41	0%	49	38.8%	10	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
C22orf29	79680	genome.wustl.edu	37	22	19839229	19839229	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024627.5	-1	validated	p.A186S	0.005	63	0%	73	32.9%	9	0%	possibly_damaging(0.868)	deleterious(0)	deleterious(0.782)	NULL
C22orf25	128989	genome.wustl.edu	37	22	20040909	20040909	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000450019	+1	known	p.E98K	0.000	38	0%	63	44.4%	0	-	benign(0.062)	tolerated(0.11)	neutral(0.276)	NULL
RTN4R	65078	genome.wustl.edu	37	22	20230372	20230372	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_023004.5	-1	reviewed	p.R95Q	0.671	23	0%	25	32%	1	0%	benign(0.048)	tolerated(0.31)	neutral(0.030)	superfamily_SSF52058
RIMBP3	85376	genome.wustl.edu	37	22	20456719	20456719	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015672.1	-1	validated	p.R1528M	0.000	253	0%	450	18.2%	0	-	probably_damaging(0.995)	tolerated(0.07)	deleterious(0.776)	NULL
KLHL22	84861	genome.wustl.edu	37	22	20812181	20812181	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032775.2	-1	validated	p.R407C	0.997	60	0%	50	38%	23	52.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
LZTR1	8216	genome.wustl.edu	37	22	21340155	21340155	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006767.3	+1	reviewed	p.R97W	1.000	69	0%	120	37.5%	8	25%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Kelch_1,HMMSmart_SM00612,superfamily_Galactose oxidase central domain
FLJ39582	353117	genome.wustl.edu	37	22	21363728	21363728	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_027051.1	+1	validated	NULL	0.603	60	0%	69	15.9%	0	-	-	-	-	-
CCDC116	164592	genome.wustl.edu	37	22	21990876	21990876	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152612.2	+1	provisional	p.F453	0.218	60	0%	82	29.3%	1	100%	-	-	-	NULL
ZNF280A	129025	genome.wustl.edu	37	22	22869856	22869856	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080740.3	-1	reviewed	p.I33	0.005	178	0.6%	274	22.3%	0	-	-	-	-	NULL
GGTLC2	91227	genome.wustl.edu	37	22	22990110	22990110	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_199127.2	+1	validated	p.A186T	0.537	24	0%	39	30.8%	2	0%	benign(0)	tolerated(0.4)	neutral(0.016)	HMMPfam_G_glu_transpept
IGLV3-16	28799	genome.wustl.edu	37	22	23090161	23090161	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390311	+1	known	p.G34*	0.480	98	0%	206	34%	0	-	-	-	-	HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
IGLV4-3	28786	genome.wustl.edu	37	22	23214124	23214124	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000390318	+1	known	p.R94H	0.000	79	0%	86	40.7%	0	-	possibly_damaging(0.711)	tolerated(0.09)	deleterious(0.553)	HMMSmart_SM00406,HMMSmart_SM00409,HMMPfam_V-set,superfamily_Immunoglobulin
RGL4	266747	genome.wustl.edu	37	22	24034601	24034601	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153615.1	+1	provisional	p.R87W	0.000	275	0%	518	27%	2	50%	benign(0)	tolerated(0.09)	neutral(0.296)	NULL
CABIN1	23523	genome.wustl.edu	37	22	24456467	24456467	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012295.2	+1	reviewed	p.A494S	1.000	70	0%	132	40.2%	11	72.7%	benign(0)	tolerated(0.6)	neutral(0.004)	NULL
CABIN1	23523	genome.wustl.edu	37	22	24562613	24562613	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012295.2	+1	reviewed	p.E1672*	1.000	18	0%	25	48%	33	18.1%	-	-	-	NULL
LOC100287161	100287161	genome.wustl.edu	37	22	24656808	24656808	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343792.1	-1	model	p.P95S	1.000	134	0.7%	210	21.9%	0	-	-	-	-	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
SPECC1L	23384	genome.wustl.edu	37	22	24717783	24717783	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145468.1	+1	validated	p.E279*	1.000	70	0%	98	27.6%	6	16.6%	-	-	-	NULL
SPECC1L	23384	genome.wustl.edu	37	22	24724866	24724866	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145468.1	+1	validated	p.K733N	1.000	147	0%	195	36.4%	10	20%	probably_damaging(0.998)	tolerated(0.13)	deleterious(0.727)	NULL
SPECC1L	23384	genome.wustl.edu	37	22	24836575	24836575	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000493440	+1	known	p.R52Q	0.000	70	0%	82	36.6%	4	50%	unknown(0)	-	-	NULL
UPB1	51733	genome.wustl.edu	37	22	24891466	24891466	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016327.2	+1	reviewed	p.K32R	1.000	37	0%	47	38.3%	0	-	benign(0.414)	tolerated(0.47)	neutral(0.145)	NULL
UPB1	51733	genome.wustl.edu	37	22	24909330	24909330	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016327.2	+1	reviewed	p.I166	1.000	103	0%	150	24.7%	0	-	-	-	-	HMMPfam_CN_hydrolase,superfamily_Carbon-nitrogen hydrolase
UPB1	51733	genome.wustl.edu	37	22	24909451	24909451	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016327.2	+1	reviewed	p.E207K	1.000	53	0%	95	24.2%	0	-	possibly_damaging(0.863)	deleterious(0.02)	deleterious(0.717)	HMMPfam_CN_hydrolase,superfamily_Carbon-nitrogen hydrolase
PIWIL3	440822	genome.wustl.edu	37	22	25119100	25119100	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008496.2	-1	validated	p.E794G	0.995	280	0%	474	32.9%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMPfam_Piwi,superfamily_RNaseH_fold
SGSM1	129049	genome.wustl.edu	37	22	25315899	25315899	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039948.2	+1	validated	p.V1099	1.000	163	0.6%	326	31.6%	0	-	-	-	-	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p
SGSM1	129049	genome.wustl.edu	37	22	25320205	25320205	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039948.2	+1	validated	p.L1137	0.938	63	0%	89	24.7%	0	-	-	-	-	superfamily_Ypt/Rab-GAP domain of gyp1p
TMEM211	255349	genome.wustl.edu	37	22	25331512	25331512	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001663.1	-1	provisional	p.P60S	0.839	51	0%	119	34.5%	0	-	probably_damaging(0.995)	tolerated(0.09)	deleterious(0.754)	HMMPfam_L_HGMIC_fpl
ADRBK2	157	genome.wustl.edu	37	22	26086233	26086233	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005160.3	+1	reviewed	p.K345N	1.000	158	0%	217	35%	5	60%	benign(0.374)	tolerated(0.59)	neutral(0.123)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
ADRBK2	157	genome.wustl.edu	37	22	26110531	26110531	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005160.3	+1	reviewed	p.E550K	1.000	99	0%	166	30.7%	2	50%	benign(0.192)	tolerated(0.18)	neutral(0.074)	NULL
MYO18B	84700	genome.wustl.edu	37	22	26159209	26159209	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032608.5	+1	reviewed	p.E17D	1.000	72	0%	104	37.5%	0	-	probably_damaging(0.987)	deleterious(0)	deleterious(0.881)	NULL
MYO18B	84700	genome.wustl.edu	37	22	26231386	26231386	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032608.5	+1	reviewed	p.E1062K	1.000	116	0%	237	41.8%	0	-	possibly_damaging(0.863)	tolerated(0.11)	deleterious(0.605)	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO18B	84700	genome.wustl.edu	37	22	26242122	26242122	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032608.5	+1	reviewed	p.A1142T	0.096	58	0%	72	31.9%	0	-	benign(0.001)	tolerated(0.07)	neutral(0.319)	HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
MYO18B	84700	genome.wustl.edu	37	22	26273958	26273958	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032608.5	+1	reviewed	p.E1419D	0.017	293	0%	507	33.1%	0	-	possibly_damaging(0.917)	tolerated(0.12)	deleterious(0.629)	NULL
MYO18B	84700	genome.wustl.edu	37	22	26399265	26399265	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032608.5	+1	reviewed	p.R2108*	0.008	116	0.9%	108	19.4%	0	-	-	-	-	NULL
MYO18B	84700	genome.wustl.edu	37	22	26423555	26423555	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032608.5	+1	reviewed	p.E2539K	0.088	98	0%	147	37.4%	0	-	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	NULL
SEZ6L	23544	genome.wustl.edu	37	22	26688377	26688377	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021115.4	+1	validated	p.L34I	0.000	37	0%	59	28.8%	0	-	possibly_damaging(0.468)	tolerated(0.38)	neutral(0.171)	NULL
SEZ6L	23544	genome.wustl.edu	37	22	26761393	26761393	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021115.4	+1	validated	p.I885	0.999	57	0%	72	29.2%	1	100%	-	-	-	HMMPfam_Sushi,HMMSmart_SM00032,superfamily_Complement control module/SCR domain
CRYBB1	1414	genome.wustl.edu	37	22	27003882	27003882	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001887.3	-1	reviewed	p.R135W	1.000	42	0%	62	41.9%	1	0%	benign(0.311)	tolerated(0.19)	neutral(0.147)	HMMPfam_Crystall,HMMSmart_XTALbg,superfamily_G_crystallin_SF
CRYBB1	1414	genome.wustl.edu	37	22	27003891	27003891	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001887.3	-1	reviewed	p.R132C	1.000	46	0%	59	32.2%	1	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Crystall,HMMSmart_XTALbg,superfamily_G_crystallin_SF
PITPNB	23760	genome.wustl.edu	37	22	28315109	28315109	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000436663	-1	known	p.D3Y	0.004	156	0%	212	33%	0	-	benign(0.386)	-	-	NULL
TTC28	23331	genome.wustl.edu	37	22	28503576	28503576	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145418.1	-1	validated	p.E753K	1.000	195	0%	244	32.8%	2	50%	benign(0.261)	tolerated(0.07)	neutral(0.346)	superfamily_SSF48452
CHEK2	11200	genome.wustl.edu	37	22	29092924	29092924	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005735.1	-1	reviewed	p.L397V	0.992	179	0%	302	31.8%	17	52.9%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
EMID1	129080	genome.wustl.edu	37	22	29611594	29611594	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_133455.2	+1	validated	p.G98	0.658	74	0%	116	39.7%	21	57.1%	-	-	-	HMMPfam_EMI
RFPL1	5988	genome.wustl.edu	37	22	29837600	29837600	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021026.2	+1	validated	p.R148Q	0.000	266	0%	460	37.2%	0	-	probably_damaging(0.978)	tolerated(0.42)	neutral(0.434)	HMMSmart_PRY
NEFH	4744	genome.wustl.edu	37	22	29884892	29884892	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021076.3	+1	reviewed	p.S421	0.560	97	0%	222	35.1%	0	-	-	-	-	NULL
NEFH	4744	genome.wustl.edu	37	22	29885882	29885882	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021076.3	+1	reviewed	p.K751N	0.994	135	0%	362	34.3%	0	-	probably_damaging(0.997)	tolerated(0.1)	deleterious(0.752)	NULL
THOC5	8563	genome.wustl.edu	37	22	29932681	29932681	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002877.1	-1	validated	p.L216I	1.000	192	0%	359	32.9%	26	46.1%	benign(0.268)	tolerated(0.15)	neutral(0.270)	HMMPfam_FimP
NIPSNAP1	8508	genome.wustl.edu	37	22	29965242	29965242	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003634.2	-1	reviewed	p.D103N	1.000	70	0%	118	31.4%	70	52.8%	probably_damaging(0.995)	tolerated(0.57)	neutral(0.464)	NULL
NF2	4771	genome.wustl.edu	37	22	30032797	30032797	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000268.3	+1	reviewed	p.E58*	1.000	193	0%	364	32.1%	15	33.3%	-	-	-	HMMPfam_FERM_N,HMMSmart_SM00295,superfamily_Ubiquitin-like
ASCC2	84164	genome.wustl.edu	37	22	30197098	30197098	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032204.3	-1	provisional	p.E524*	0.995	144	0%	324	28.7%	42	16.6%	-	-	-	NULL
MTMR3	8897	genome.wustl.edu	37	22	30374976	30374976	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021090.3	+1	reviewed	p.E49K	1.000	162	0%	289	31.1%	8	75%	probably_damaging(0.971)	tolerated(0.6)	neutral(0.417)	superfamily_PH domain-like
MTMR3	8897	genome.wustl.edu	37	22	30409419	30409419	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021090.3	+1	reviewed	p.E464	1.000	331	0%	454	32.4%	12	66.6%	-	-	-	HMMSmart_SM00404,superfamily_(Phosphotyrosine protein) phosphatases II
SF3A1	10291	genome.wustl.edu	37	22	30738244	30738244	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005877.4	-1	reviewed	p.I274	0.290	122	0%	196	21.9%	42	23.8%	-	-	-	NULL
CCDC157	550631	genome.wustl.edu	37	22	30769913	30769913	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017437.2	+1	validated	p.E502G	1.000	28	0%	41	34.1%	7	57.1%	probably_damaging(0.997)	tolerated(0.14)	deleterious(0.716)	superfamily_Prefoldin
SEC14L3	266629	genome.wustl.edu	37	22	30862365	30862365	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174975.4	-1	reviewed	p.E179G	1.000	154	0%	285	28.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_CRAL_TRIO,HMMSmart_SEC14,superfamily_CRAL_TRIO_C
SEC14L4	284904	genome.wustl.edu	37	22	30891317	30891317	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174977.3	-1	reviewed	p.S116F	1.000	76	0%	124	35.5%	0	-	probably_damaging(0.988)	deleterious(0.01)	deleterious(0.843)	HMMPfam_CRAL_TRIO,HMMSmart_SM00516,superfamily_CRAL/TRIO domain
OSBP2	23762	genome.wustl.edu	37	22	31286872	31286872	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030758.3	+1	reviewed	p.R594H	1.000	67	0%	114	24.6%	9	55.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Oxysterol_BP
INPP5J	27124	genome.wustl.edu	37	22	31521762	31521762	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000331075	+1	known	p.R346Q	0.963	55	0%	175	27.4%	0	-	probably_damaging(0.976)	deleterious(0)	deleterious(0.863)	NULL
INPP5J	27124	genome.wustl.edu	37	22	31522914	31522914	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002837.1	+1	validated	p.S133L	0.283	37	0%	72	40.3%	2	0%	possibly_damaging(0.46)	tolerated(0.08)	neutral(0.451)	HMMSmart_IPPc,HMMPfam_Exo_endo_phos,superfamily_Exo_endo_phos
INPP5J	27124	genome.wustl.edu	37	22	31529903	31529903	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002837.1	+1	validated	p.S472L	0.999	26	0%	46	23.9%	10	60%	probably_damaging(0.99)	tolerated(0.14)	deleterious(0.691)	NULL
PLA2G3	50487	genome.wustl.edu	37	22	31534698	31534698	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015715.3	-1	validated	p.R201Q	1.000	289	0%	590	37.1%	0	-	probably_damaging(1)	tolerated(0.29)	deleterious(0.529)	HMMPfam_Phospholip_A2_2,superfamily_Phospholipase A2 PLA2
PLA2G3	50487	genome.wustl.edu	37	22	31536060	31536060	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015715.3	-1	validated	p.G94D	0.000	26	0%	59	42.4%	1	100%	benign(0.43)	tolerated(0.11)	neutral(0.412)	NULL
PATZ1	23598	genome.wustl.edu	37	22	31731715	31731715	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014323.2	-1	reviewed	p.S490	0.633	162	0%	238	30.7%	49	46.9%	-	-	-	superfamily_C2H2 and C2HC zinc fingers
EIF4ENIF1	56478	genome.wustl.edu	37	22	31859810	31859810	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019843.3	-1	reviewed	p.R148C	1.000	87	0%	122	44.3%	11	18.1%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_EIF4E-T
SFI1	9814	genome.wustl.edu	37	22	32010835	32010835	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001007467.1	+1	validated	p.A1019	0.156	64	0%	62	38.7%	17	23.5%	-	-	-	NULL
PRR14L	253143	genome.wustl.edu	37	22	32109587	32109587	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173566.2	-1	validated	p.T1413M	0.000	119	0%	285	36.1%	8	50%	benign(0.007)	deleterious(0.02)	neutral(0.383)	NULL
PRR14L	253143	genome.wustl.edu	37	22	32134505	32134505	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173566.2	-1	validated	p.S114	0.000	130	0%	284	35.2%	4	50%	-	-	-	NULL
DEPDC5	9681	genome.wustl.edu	37	22	32150967	32150967	+	Splice_Site	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014662.2	+1	validated	e1+2	1.000	320	0%	952	29%	3	100%	-	-	-	-
DEPDC5	9681	genome.wustl.edu	37	22	32217579	32217579	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000433147	+1	known	p.L52I	1.000	88	0%	161	34.2%	4	50%	-	-	-	NULL
DEPDC5	9681	genome.wustl.edu	37	22	32234829	32234829	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014662.2	+1	validated	p.R829Q	1.000	107	0%	187	35.3%	1	0%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	NULL
C22orf24	25775	genome.wustl.edu	37	22	32330252	32330252	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015372.1	-1	predicted	p.S112I	0.259	170	0%	383	37.6%	2	50%	benign(0.201)	-	-	NULL
C22orf24	25775	genome.wustl.edu	37	22	32330414	32330414	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015372.1	-1	predicted	p.S58Y	0.005	134	0%	334	37.1%	0	-	benign(0.347)	-	-	NULL
RFPL2	10739	genome.wustl.edu	37	22	32587002	32587002	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006605.3	-1	validated	p.F237	0.123	214	0%	350	42.3%	0	-	-	-	-	HMMPfam_SPRY,HMMSmart_SM00449
SLC5A4	6527	genome.wustl.edu	37	22	32621800	32621800	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014227.2	-1	validated	p.L431I	0.004	104	0%	195	29.7%	0	-	benign(0)	tolerated(0.41)	neutral(0.015)	HMMPfam_SSF
RFPL3-AS1	10737	genome.wustl.edu	37	22	32756076	32756076	+	RNA	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_001450.2	-1	provisional	NULL	0.001	51	0%	51	51%	0	-	-	-	-	-
BPIFC	254240	genome.wustl.edu	37	22	32828360	32828360	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174932.2	-1	validated	p.F383	0.997	248	0%	414	34.5%	0	-	-	-	-	HMMPfam_LBP_BPI_CETP_C,HMMSmart_BPI2,superfamily_Bactericidal_perm-incr_a/b_dom
FBXO7	25793	genome.wustl.edu	37	22	32894502	32894502	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012179.3	+1	reviewed	p.R518	0.000	42	0%	47	29.8%	126	44.4%	-	-	-	NULL
SYN3	8224	genome.wustl.edu	37	22	33260974	33260974	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003490.3	-1	reviewed	p.K213N	1.000	227	0%	378	28.3%	0	-	unknown(0)	tolerated(0.37)	-	HMMPfam_Synapsin_C,superfamily_Glutathione synthetase ATP-binding domain-like
LARGE	9215	genome.wustl.edu	37	22	34157362	34157362	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004737.4	-1	reviewed	p.F34	1.000	168	0%	216	33.8%	5	60%	-	-	-	NULL
HMGXB4	10042	genome.wustl.edu	37	22	35660803	35660803	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003681.2	+1	validated	p.S141L	0.992	50	0%	91	42.9%	2	50%	benign(0.315)	deleterious(0.05)	neutral(0.444)	NULL
RASD2	23551	genome.wustl.edu	37	22	35947597	35947597	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014310.3	+1	reviewed	p.D107N	1.000	95	0%	129	33.3%	0	-	benign(0.097)	deleterious(0.01)	neutral(0.413)	HMMSmart_RAS,HMMPfam_Ras,superfamily_SSF52540
APOL6	80830	genome.wustl.edu	37	22	36054765	36054765	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030641.3	+1	reviewed	p.D52Y	0.001	98	0%	149	36.9%	0	-	benign(0.002)	tolerated(0.06)	neutral(0.323)	HMMPfam_ApoL
APOL5	80831	genome.wustl.edu	37	22	36122895	36122895	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030642.1	+1	reviewed	p.K260N	0.001	111	0%	222	38.7%	0	-	possibly_damaging(0.896)	tolerated(0.07)	deleterious(0.672)	HMMPfam_ApoL
RBFOX2	23543	genome.wustl.edu	37	22	36157506	36157506	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001082578.1	-1	reviewed	p.L276S	1.000	171	0%	182	29.7%	42	40.4%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MYH9	4627	genome.wustl.edu	37	22	36684979	36684979	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002473.4	-1	reviewed	p.E1522K	1.000	111	0%	142	41.5%	442	27.6%	probably_damaging(0.982)	deleterious(0)	deleterious(0.871)	HMMPfam_Myosin_tail_1,superfamily_Prefoldin
MYH9	4627	genome.wustl.edu	37	22	36705423	36705423	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002473.4	-1	reviewed	p.E583K	1.000	166	0%	294	36.7%	212	31.6%	benign(0.001)	tolerated(0.57)	neutral(0.006)	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases
CSF2RB	1439	genome.wustl.edu	37	22	37326847	37326847	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000395.2	+1	reviewed	p.E329D	0.918	57	0%	34	41.2%	0	-	benign(0.008)	tolerated(0.31)	neutral(0.027)	NULL
CSF2RB	1439	genome.wustl.edu	37	22	37334078	37334078	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000395.2	+1	reviewed	p.S743I	0.000	45	0%	44	34.1%	3	0%	probably_damaging(0.976)	deleterious(0.01)	deleterious(0.824)	NULL
TEX33	339669	genome.wustl.edu	37	22	37387277	37387277	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000442538	-1	known	p.E121*	1.000	274	0%	490	34.3%	0	-	benign(0.253)	deleterious(0.01)	neutral(0.432)	NULL
TMPRSS6	164656	genome.wustl.edu	37	22	37470651	37470651	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153609.2	-1	reviewed	p.C489	0.835	97	0%	161	32.3%	0	-	-	-	-	HMMSmart_SM00192,superfamily_LDL receptor-like module
TMPRSS6	164656	genome.wustl.edu	37	22	37499385	37499385	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153609.2	-1	reviewed	p.E34*	0.921	70	0%	91	30.8%	0	-	-	-	-	NULL
C1QTNF6	114904	genome.wustl.edu	37	22	37578411	37578411	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031910.3	-1	validated	p.I218	1.000	76	0%	92	32.6%	19	0%	-	-	-	HMMPfam_C1q,superfamily_TNF_like
CYTH4	27128	genome.wustl.edu	37	22	37690748	37690748	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013385.3	+1	reviewed	p.F50	0.507	133	0%	299	32.1%	3	0%	-	-	-	NULL
GGA1	26088	genome.wustl.edu	37	22	38014499	38014499	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013365.4	+1	reviewed	p.D83	0.216	81	0%	104	29.8%	44	45.4%	-	-	-	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288
TRIOBP	11078	genome.wustl.edu	37	22	38119411	38119411	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039141.2	+1	reviewed	p.R283Q	0.000	192	0%	431	34.1%	2	100%	benign(0.155)	tolerated(0.65)	neutral(0.017)	NULL
MICALL1	85377	genome.wustl.edu	37	22	38329085	38329085	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000454685	+1	known	p.R334*	1.000	33	0%	61	36.1%	23	30.4%	-	-	-	NULL
PICK1	9463	genome.wustl.edu	37	22	38470322	38470322	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039583.1	+1	reviewed	p.G281	0.529	30	0%	26	38.5%	46	39.1%	-	-	-	HMMPfam_Arfaptin
BAIAP2L2	80115	genome.wustl.edu	37	22	38481380	38481380	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025045.4	-1	validated	p.G506D	1.000	136	0%	242	33.9%	3	33.3%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
BAIAP2L2	80115	genome.wustl.edu	37	22	38494163	38494163	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025045.4	-1	validated	p.L124	0.276	49	0%	51	27.5%	2	100%	-	-	-	HMMPfam_IMD
KDELR3	11015	genome.wustl.edu	37	22	38877408	38877408	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016657.1	+1	reviewed	p.V181	0.996	164	0%	251	38.2%	12	8.3%	-	-	-	NULL
TOMM22	56993	genome.wustl.edu	37	22	39078435	39078435	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020243.4	+1	reviewed	p.Q75H	0.994	64	0%	80	23.7%	154	29.2%	possibly_damaging(0.848)	deleterious(0.02)	deleterious(0.709)	NULL
JOSD1	9929	genome.wustl.edu	37	22	39085019	39085019	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014876.5	-1	validated	p.R144*	1.000	83	0%	146	32.9%	28	21.4%	-	-	-	HMMPfam_Josephin
APOBEC3F	200316	genome.wustl.edu	37	22	39448225	39448225	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145298.5	+1	validated	p.F290L	0.817	133	0%	201	30.8%	2	0%	probably_damaging(0.973)	deleterious(0)	deleterious(0.859)	HMMPfam_APOBEC_N,superfamily_Cytidine deaminase-like
MGAT3	4248	genome.wustl.edu	37	22	39884589	39884589	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098270.1	+1	reviewed	p.H413N	1.000	27	0%	34	35.3%	0	-	probably_damaging(0.983)	deleterious(0.02)	deleterious(0.812)	HMMPfam_Glyco_transf_17
SMCR7L	54471	genome.wustl.edu	37	22	39908488	39908488	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019008.4	+1	validated	p.D192N	1.000	24	0%	22	27.3%	30	13.3%	probably_damaging(0.996)	tolerated(0.14)	deleterious(0.711)	NULL
SMCR7L	54471	genome.wustl.edu	37	22	39910260	39910260	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019008.4	+1	validated	p.E442*	1.000	99	1%	164	26.8%	13	46.1%	-	-	-	NULL
CACNA1I	8911	genome.wustl.edu	37	22	40066842	40066842	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021096.3	+1	reviewed	p.C1474	0.998	116	0.9%	153	28.8%	0	-	-	-	-	NULL
ENTHD1	150350	genome.wustl.edu	37	22	40161495	40161495	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152512.3	-1	provisional	p.E318*	0.156	95	0%	99	27.3%	0	-	-	-	-	NULL
GRAP2	9402	genome.wustl.edu	37	22	40356158	40356158	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004810.2	+1	reviewed	p.G90	0.987	105	0%	166	31.3%	0	-	unknown(0)	-	-	HMMPfam_SH2,HMMSmart_SM00252,superfamily_SH2 domain
GRAP2	9402	genome.wustl.edu	37	22	40364189	40364189	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004810.2	+1	reviewed	p.Q201	0.260	43	0%	60	46.7%	0	-	-	-	-	superfamily_SH3-domain
TNRC6B	23112	genome.wustl.edu	37	22	40676079	40676079	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015088.2	+1	validated	p.R1062*	1.000	188	0%	257	33.9%	1	0%	-	-	-	NULL
ADSL	158	genome.wustl.edu	37	22	40762493	40762493	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000026.2	+1	reviewed	p.S474	0.105	175	0.6%	485	28.9%	111	39.6%	-	-	-	NULL
SGSM3	27352	genome.wustl.edu	37	22	40800640	40800640	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015705.4	+1	validated	p.S149F	1.000	44	0%	57	38.6%	56	46.4%	probably_damaging(0.976)	deleterious(0.02)	deleterious(0.801)	HMMPfam_TBC,HMMSmart_SM00164,superfamily_Ypt/Rab-GAP domain of gyp1p
SGSM3	27352	genome.wustl.edu	37	22	40803470	40803470	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015705.4	+1	validated	p.Y474	0.953	13	0%	13	38.5%	64	50%	-	-	-	superfamily_SH3-domain
SGSM3	27352	genome.wustl.edu	37	22	40805519	40805519	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015705.4	+1	validated	p.A721V	0.000	117	0%	169	39.1%	113	37.1%	benign(0)	tolerated(0.65)	neutral(0.003)	NULL
MCHR1	2847	genome.wustl.edu	37	22	41077326	41077326	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005297.3	+1	reviewed	p.T221	0.994	106	0%	145	26.2%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
XPNPEP3	63929	genome.wustl.edu	37	22	41282427	41282427	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022098.2	+1	validated	p.R234W	0.086	55	0%	102	29.4%	13	38.4%	probably_damaging(0.974)	deleterious(0.02)	deleterious(0.799)	superfamily_Creatinase/prolidase N-terminal domain
EP300	2033	genome.wustl.edu	37	22	41533773	41533773	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001429.3	+1	reviewed	p.R580Q	1.000	98	0%	194	34.5%	6	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_KIX,superfamily_KIX
EP300	2033	genome.wustl.edu	37	22	41572404	41572404	+	Nonsense_Mutation	SNP	C	C	T	rs139310551		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001429.3	+1	reviewed	p.R1645*	0.995	52	0%	88	35.2%	12	33.3%	-	-	-	NULL
EP300	2033	genome.wustl.edu	37	22	41573557	41573557	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001429.3	+1	reviewed	p.F1948I	0.997	78	0%	156	31.4%	32	28.1%	unknown(0)	tolerated(0.46)	-	NULL
POLR3H	171568	genome.wustl.edu	37	22	41928714	41928714	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001018050.2	-1	validated	p.D82Y	1.000	50	0%	130	31.5%	22	27.2%	-	-	-	HMMPfam_RNA_pol_Rbc25
SEPT3	55964	genome.wustl.edu	37	22	42388765	42388765	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145733.2	+1	reviewed	p.E288G	1.000	129	0%	340	32.1%	0	-	possibly_damaging(0.842)	deleterious(0.01)	deleterious(0.728)	HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases
FAM109B	150368	genome.wustl.edu	37	22	42473419	42473419	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002034.2	+1	validated	p.R41Q	0.997	37	0%	48	35.4%	3	0%	benign(0.011)	tolerated(1)	neutral(0.001)	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
FAM109B	150368	genome.wustl.edu	37	22	42474053	42474053	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002034.2	+1	validated	p.K252N	0.000	5	0.000	22	0.273	9	0%	benign(0.007)	tolerated(0.12)	neutral(0.261)	NULL
TCF20	6942	genome.wustl.edu	37	22	42575644	42575644	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005650.1	-1	reviewed	p.R1907Q	1.000	122	0%	196	32.7%	44	50%	possibly_damaging(0.833)	tolerated(0.11)	deleterious(0.589)	HMMSmart_SM00249
TCF20	6942	genome.wustl.edu	37	22	42608083	42608083	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005650.1	-1	reviewed	p.A1077T	0.000	133	0%	261	29.9%	9	11.1%	benign(0)	tolerated(1)	-	NULL
TCF20	6942	genome.wustl.edu	37	22	42609006	42609006	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005650.1	-1	reviewed	p.S769Y	0.996	142	0.7%	235	30.6%	6	66.6%	possibly_damaging(0.444)	deleterious(0.03)	deleterious(0.509)	NULL
A4GALT	53947	genome.wustl.edu	37	22	43089181	43089181	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017436.4	-1	reviewed	p.K259N	1.000	27	0%	40	42.5%	140	35.7%	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	HMMPfam_Gb3_synth
ARFGAP3	26286	genome.wustl.edu	37	22	43203104	43203104	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000453516	-1	known	p.R265*	0.159	43	0%	33	45.5%	60	28.3%	-	-	-	NULL
ARFGAP3	26286	genome.wustl.edu	37	22	43230255	43230255	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014570.4	-1	reviewed	p.S157F	0.987	78	0%	190	34.7%	29	41.3%	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
ARFGAP3	26286	genome.wustl.edu	37	22	43231425	43231425	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014570.4	-1	reviewed	p.L112	0.539	278	0%	598	28.9%	40	40%	-	-	-	HMMPfam_ArfGap,HMMSmart_ArfGap,superfamily_ArfGAP
TTLL12	23170	genome.wustl.edu	37	22	43575962	43575962	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015140.3	-1	validated	p.F197	0.998	39	0%	64	40.6%	23	69.5%	-	-	-	NULL
SCUBE1	80274	genome.wustl.edu	37	22	43606959	43606959	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173050.2	-1	validated	p.F784	0.995	316	0%	565	36.5%	0	-	-	-	-	HMMPfam_GCC2_GCC3
MPPED1	758	genome.wustl.edu	37	22	43821179	43821179	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001044370.1	+1	validated	p.I63N	1.000	55	0%	86	39.5%	0	-	probably_damaging(0.992)	tolerated(0.05)	deleterious(0.793)	NULL
MPPED1	758	genome.wustl.edu	37	22	43831116	43831116	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001044370.1	+1	validated	p.K129N	1.000	49	0%	52	21.2%	0	-	probably_damaging(0.969)	tolerated(0.39)	neutral(0.427)	HMMPfam_Metallophos,superfamily_Metallo-dependent phosphatases
EFCAB6	64800	genome.wustl.edu	37	22	44112839	44112839	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022785.2	-1	validated	p.E257D	0.015	289	0.3%	334	29%	5	60%	benign(0.066)	tolerated(0.16)	neutral(0.064)	NULL
EFCAB6	64800	genome.wustl.edu	37	22	44127686	44127686	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022785.2	-1	validated	p.S217L	0.042	248	0%	335	30.7%	4	25%	benign(0.001)	tolerated(0.57)	neutral(0.006)	superfamily_EF-hand
PARVG	64098	genome.wustl.edu	37	22	44585032	44585032	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001137605.1	+1	validated	p.A96T	0.872	73	0%	65	38.5%	7	0%	possibly_damaging(0.935)	tolerated(1)	neutral(0.381)	HMMPfam_CH,superfamily_Calponin-homology domain CH-domain
PARVG	64098	genome.wustl.edu	37	22	44592227	44592227	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001137605.1	+1	validated	p.A215T	1.000	158	0%	224	30.8%	13	0%	possibly_damaging(0.742)	tolerated(0.37)	neutral(0.291)	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
PARVG	64098	genome.wustl.edu	37	22	44594597	44594597	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001137605.1	+1	validated	p.E270*	0.992	268	0%	450	35.6%	25	0%	-	-	-	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
SMC1B	27127	genome.wustl.edu	37	22	45749965	45749965	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148674.3	-1	validated	p.E1056K	1.000	169	0%	294	33.7%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SMC_N,superfamily_SSF52540
SMC1B	27127	genome.wustl.edu	37	22	45785670	45785670	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_148674.3	-1	validated	p.K551N	0.997	163	0%	261	34.5%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_SMC_N,HMMPfam_SMC_hinge,superfamily_SMC_hinge,superfamily_SSF52540
FBLN1	2192	genome.wustl.edu	37	22	45914660	45914660	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006486.2	+1	reviewed	p.E60*	1.000	50	0%	84	38.1%	321	0.6%	-	-	-	HMMPfam_ANATO,HMMSmart_SM00104,PatternScan_ANAPHYLATOXIN_1
ATXN10	25814	genome.wustl.edu	37	22	46136386	46136386	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013236.3	+1	reviewed	p.L381M	1.000	220	0%	230	27.4%	136	43.3%	probably_damaging(1)	tolerated(0.21)	deleterious(0.544)	superfamily_ARM-type_fold,HMMPfam_Atx10homo_assoc
PPARA	5465	genome.wustl.edu	37	22	46627847	46627847	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001928.2	+1	reviewed	p.F290	0.948	57	0%	135	41.5%	1	0%	-	-	-	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain
PKDREJ	10343	genome.wustl.edu	37	22	46653300	46653300	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006071.1	-1	reviewed	p.F1974L	0.032	80	0%	166	30.1%	0	-	probably_damaging(0.996)	tolerated(0.07)	deleterious(0.780)	HMMPfam_PKD_channel
PKDREJ	10343	genome.wustl.edu	37	22	46654443	46654443	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006071.1	-1	reviewed	p.F1593V	0.906	170	0%	324	29%	0	-	possibly_damaging(0.949)	deleterious(0.01)	deleterious(0.798)	NULL
PKDREJ	10343	genome.wustl.edu	37	22	46657646	46657646	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006071.1	-1	reviewed	p.F525C	0.976	31	0%	59	39%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_REJ
CELSR1	9620	genome.wustl.edu	37	22	46787711	46787711	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014246.1	-1	reviewed	p.E1989D	0.994	14	0%	34	38.2%	2	100%	benign(0.067)	tolerated(0.26)	neutral(0.038)	superfamily_Concanavalin A-like lectins/glucanases
GRAMD4	23151	genome.wustl.edu	37	22	47073086	47073086	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015124.2	+1	validated	p.E559K	1.000	112	0%	111	32.4%	4	0%	possibly_damaging(0.455)	tolerated(0.19)	neutral(0.199)	NULL
CERK	64781	genome.wustl.edu	37	22	47095304	47095304	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022766.5	-1	validated	p.Y283*	1.000	91	0%	253	30%	6	16.6%	-	-	-	NULL
BRD1	23774	genome.wustl.edu	37	22	50216753	50216753	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014577.1	-1	reviewed	p.E405K	0.811	116	0%	222	25.2%	9	11.1%	possibly_damaging(0.741)	tolerated(0.23)	neutral(0.313)	NULL
ZBED4	9889	genome.wustl.edu	37	22	50280052	50280052	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014838.2	+1	validated	p.V914	0.203	26	0%	79	40.5%	14	57.1%	-	-	-	NULL
ZBED4	9889	genome.wustl.edu	37	22	50280475	50280475	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014838.2	+1	validated	p.S1055	0.000	23	0%	34	41.2%	14	21.4%	-	-	-	NULL
MLC1	23209	genome.wustl.edu	37	22	50523168	50523168	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015166.3	-1	reviewed	p.S55Y	0.992	29	0%	48	20.8%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
MOV10L1	54456	genome.wustl.edu	37	22	50591491	50591491	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018995.2	+1	reviewed	p.K970N	1.000	147	0%	263	36.1%	0	-	benign(0.003)	tolerated(0.17)	neutral(0.059)	superfamily_P-loop containing nucleoside triphosphate hydrolases
MOV10L1	54456	genome.wustl.edu	37	22	50599252	50599252	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018995.2	+1	reviewed	p.R1154*	0.922	235	0%	466	24.2%	2	0%	-	-	-	NULL
PANX2	56666	genome.wustl.edu	37	22	50616107	50616107	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_052839.3	+1	reviewed	p.F322	1.000	29	0%	50	50%	5	60%	-	-	-	NULL
TUBGCP6	85378	genome.wustl.edu	37	22	50660064	50660064	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020461.3	-1	reviewed	p.P908	0.000	24	0%	39	33.3%	5	40%	-	-	-	HMMPfam_Spc97_Spc98
TUBGCP6	85378	genome.wustl.edu	37	22	50662994	50662994	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020461.3	-1	reviewed	p.E671*	1.000	131	0%	178	38.8%	10	30%	-	-	-	HMMPfam_Spc97_Spc98
SBF1	6305	genome.wustl.edu	37	22	50895492	50895492	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000337034	-1	known	p.A1302V	1.000	29	0%	28	28.6%	36	58.3%	benign(0)	tolerated(0.56)	neutral(0.006)	superfamily_(Phosphotyrosine protein) phosphatases II
SBF1	6305	genome.wustl.edu	37	22	50898532	50898532	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002972.2	-1	validated	p.D1114N	1.000	66	1.5%	108	37%	60	58.3%	possibly_damaging(0.68)	deleterious(0.01)	deleterious(0.648)	superfamily_(Phosphotyrosine protein) phosphatases II
TYMP	1890	genome.wustl.edu	37	22	50967988	50967988	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113755.1	-1	reviewed	p.E51K	0.290	26	0%	33	45.5%	35	0%	possibly_damaging(0.679)	tolerated(1)	neutral(0.242)	HMMPfam_Glycos_trans_3N,superfamily_Glyco_trans_3
SYCE3	644186	genome.wustl.edu	37	22	50994736	50994736	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001123225.1	-1	predicted	p.E33D	1.000	315	0%	511	35.4%	0	-	benign(0.035)	deleterious(0)	neutral(0.447)	NULL
CHKB	1120	genome.wustl.edu	37	22	51018642	51018642	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005198.4	-1	reviewed	p.F265	0.691	125	0%	258	40.7%	42	40.4%	-	-	-	HMMPfam_Choline_kinase,superfamily_Protein kinase-like (PK-like)
SHANK3	85358	genome.wustl.edu	37	22	51117213	51117213	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080420.1	+1	reviewed	p.L155	0.139	59	0%	105	31.4%	1	0%	-	-	-	HMMPfam_Ank,superfamily_Ankyrin repeat
SHANK3	85358	genome.wustl.edu	37	22	51150051	51150051	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001080420.1	+1	reviewed	p.R723W	1.000	136	0%	153	32%	0	-	probably_damaging(0.997)	tolerated(0.18)	deleterious(0.522)	NULL
ENSG00000210082	0	genome.wustl.edu	37	MT	1973	1973	+	RNA	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000387347	+1	known	NULL	NULL	9	0.000	18	0.278	1319	22.2%	-	-	-	-
PPP2R3B	28227	genome.wustl.edu	37	X	299561	299561	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013239.4	-1	reviewed	p.I474	0.999	163	0%	291	31.3%	87	48.2%	-	-	-	superfamily_EF-hand
CSF2RA	1438	genome.wustl.edu	37	X	1407431	1407431	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006140.4	+1	reviewed	p.S80L	0.000	261	0%	555	31%	1	0%	benign(0.252)	tolerated(0.21)	neutral(0.070)	NULL
CSF2RA	1438	genome.wustl.edu	37	X	1409342	1409342	+	Nonsense_Mutation	SNP	G	G	T	rs137852353		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006140.4	+1	reviewed	p.G196*	0.049	204	0%	311	23.8%	5	0%	-	-	-	superfamily_Fibronectin type III
SLC25A6	293	genome.wustl.edu	37	X	1505534	1505534	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001636.3	-1	reviewed	p.F286	0.996	174	0%	323	30.7%	1549	46.8%	-	-	-	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr
SLC25A6	293	genome.wustl.edu	37	X	1508278	1508278	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001636.3	-1	reviewed	p.R152C	0.120	69	0%	150	26%	1781	44.8%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr
ASMT	438	genome.wustl.edu	37	X	1746604	1746604	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004043.2	+1	reviewed	p.R128M	0.992	176	0%	426	36.6%	1	0%	benign(0.184)	tolerated(0.06)	neutral(0.340)	HMMPfam_Methyltransf_2,superfamily_SSF53335
XG	7499	genome.wustl.edu	37	X	2688602	2688602	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001141919.1	+1	reviewed	p.F25V	0.027	360	0%	621	38.3%	0	-	unknown(0)	deleterious(0)	-	NULL
GYG2	8908	genome.wustl.edu	37	X	2795286	2795286	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003918.2	+1	reviewed	p.E428K	0.001	124	0%	228	30.7%	1	0%	benign(0.055)	tolerated(0.15)	neutral(0.244)	NULL
ARSH	347527	genome.wustl.edu	37	X	2951077	2951077	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001011719.1	+1	validated	p.A447V	0.137	85	0%	188	26.6%	0	-	benign(0.001)	tolerated(0.61)	neutral(0.004)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
MXRA5	25878	genome.wustl.edu	37	X	3235955	3235955	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015419.3	-1	reviewed	p.R1923*	0.894	66	0%	78	32.1%	6	0%	-	-	-	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set,superfamily_Immunoglobulin
MXRA5	25878	genome.wustl.edu	37	X	3240544	3240544	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015419.3	-1	reviewed	p.K1061T	0.000	263	0%	407	35.6%	1	0%	benign(0.037)	deleterious(0)	neutral(0.447)	NULL
NLGN4X	57502	genome.wustl.edu	37	X	5811688	5811688	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020742.2	-1	reviewed	p.P541S	1.000	255	0%	372	34.1%	0	-	possibly_damaging(0.477)	deleterious(0.03)	deleterious(0.522)	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases
STS	412	genome.wustl.edu	37	X	7177480	7177480	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000351.4	+1	reviewed	p.S163Y	0.035	223	0%	241	29%	2	0%	probably_damaging(0.968)	deleterious(0)	deleterious(0.855)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
STS	412	genome.wustl.edu	37	X	7268042	7268042	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000351.4	+1	reviewed	p.D498N	0.805	180	0%	206	30.6%	1	100%	benign(0.003)	tolerated(0.2)	neutral(0.049)	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core
PNPLA4	8228	genome.wustl.edu	37	X	7893992	7893992	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142389.1	-1	reviewed	p.E57*	0.753	117	0%	171	32.2%	11	63.6%	-	-	-	HMMPfam_Patatin,superfamily_FabD/lysophospholipase-like
LOC100288723	100288723	genome.wustl.edu	37	X	8138006	8138006	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343806.1	+1	model	p.F75	0.052	49	0%	97	35.1%	0	-	-	-	-	NULL
FAM9A	171482	genome.wustl.edu	37	X	8763127	8763127	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174951.3	-1	validated	p.E275*	0.000	180	0%	246	22%	0	-	-	-	-	NULL
FAM9A	171482	genome.wustl.edu	37	X	8763412	8763412	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174951.3	-1	validated	p.E180*	0.001	474	0%	612	29.1%	0	-	-	-	-	NULL
FAM9A	171482	genome.wustl.edu	37	X	8768125	8768125	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174951.3	-1	validated	p.E30K	0.986	204	0%	192	33.3%	0	-	benign(0.01)	-	-	NULL
TBL1X	6907	genome.wustl.edu	37	X	9656071	9656071	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001139466.1	+1	reviewed	p.F124	0.924	104	0%	120	35.8%	7	0%	-	-	-	NULL
TBL1X	6907	genome.wustl.edu	37	X	9661422	9661422	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001139466.1	+1	reviewed	p.R339Q	1.000	275	0%	467	32.3%	4	0%	benign(0.152)	tolerated(0.09)	neutral(0.310)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
GPR143	4935	genome.wustl.edu	37	X	9714097	9714097	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000273.2	-1	reviewed	p.K235N	1.000	117	0%	152	27.6%	2	0%	probably_damaging(0.98)	tolerated(0.28)	neutral(0.456)	HMMPfam_Ocular_alb
SHROOM2	357	genome.wustl.edu	37	X	9862976	9862976	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001649.2	+1	reviewed	p.A343V	0.000	29	0%	32	34.4%	1	0%	benign(0)	tolerated(0.42)	neutral(0.014)	NULL
SHROOM2	357	genome.wustl.edu	37	X	9907377	9907377	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001649.2	+1	reviewed	p.D1428N	1.000	62	0%	95	32.6%	5	0%	possibly_damaging(0.649)	tolerated(0.22)	neutral(0.270)	HMMPfam_ASD2
WWC3	55841	genome.wustl.edu	37	X	10085339	10085339	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015691.3	+1	validated	p.D414N	0.994	40	0%	37	32.4%	3	0%	probably_damaging(0.981)	deleterious(0)	deleterious(0.870)	NULL
WWC3	55841	genome.wustl.edu	37	X	10109533	10109533	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015691.3	+1	validated	p.D1091N	1.000	173	0%	273	33.7%	3	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
CLCN4	1183	genome.wustl.edu	37	X	10176190	10176190	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001830.3	+1	reviewed	p.V317I	1.000	98	0%	135	34.1%	0	-	possibly_damaging(0.865)	deleterious(0.04)	deleterious(0.684)	HMMPfam_Voltage_CLC,superfamily_Clc chloride channel
MID1	4281	genome.wustl.edu	37	X	10417743	10417743	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000381.2	-1	reviewed	p.L557I	1.000	117	0%	142	37.3%	7	71.4%	benign(0)	tolerated(0.9)	-	HMMPfam_SPRY,HMMSmart_SM00449
MID1	4281	genome.wustl.edu	37	X	10427815	10427815	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000381.2	-1	reviewed	p.V440L	1.000	126	0%	177	32.2%	2	0%	benign(0.304)	deleterious(0.02)	deleterious(0.478)	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III
MID1	4281	genome.wustl.edu	37	X	10450529	10450529	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000381.2	-1	reviewed	p.I335T	1.000	155	0%	167	26.3%	2	0%	benign(0.248)	deleterious(0)	deleterious(0.470)	HMMSmart_SM00502
ARHGAP6	395	genome.wustl.edu	37	X	11196220	11196220	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013427.2	-1	reviewed	p.E543	1.000	186	0%	205	32.2%	3	0%	-	-	-	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
ARHGAP6	395	genome.wustl.edu	37	X	11204429	11204429	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013427.2	-1	reviewed	p.K400	1.000	193	0%	190	31.1%	3	0%	-	-	-	NULL
ARHGAP6	395	genome.wustl.edu	37	X	11206927	11206927	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013427.2	-1	reviewed	p.S333Y	1.000	359	0%	356	28.1%	2	0%	probably_damaging(0.996)	deleterious(0.04)	deleterious(0.810)	NULL
ARHGAP6	395	genome.wustl.edu	37	X	11215106	11215106	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013427.2	-1	reviewed	p.K253N	1.000	467	0%	431	32%	1	0%	possibly_damaging(0.931)	deleterious(0.01)	deleterious(0.783)	NULL
ARHGAP6	395	genome.wustl.edu	37	X	11682616	11682616	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013427.2	-1	reviewed	p.E111	0.977	71	0%	103	27.2%	0	-	-	-	-	NULL
MSL3	10943	genome.wustl.edu	37	X	11781114	11781114	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_078629.2	+1	reviewed	p.K249N	1.000	250	0%	337	30%	16	0%	probably_damaging(0.998)	tolerated(0.1)	deleterious(0.761)	HMMPfam_MRG
MSL3	10943	genome.wustl.edu	37	X	11793134	11793134	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_078629.2	+1	reviewed	p.E501A	1.000	151	0%	121	26.4%	36	88.8%	probably_damaging(0.979)	deleterious(0.03)	deleterious(0.786)	HMMPfam_MRG
FRMPD4	9758	genome.wustl.edu	37	X	12734645	12734645	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014728.3	+1	reviewed	p.Y689	0.841	80	0%	104	33.7%	0	-	-	-	-	NULL
FRMPD4	9758	genome.wustl.edu	37	X	12736417	12736417	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014728.3	+1	reviewed	p.S1158P	0.977	89	0%	128	27.3%	0	-	possibly_damaging(0.8)	tolerated(0.08)	deleterious(0.601)	NULL
TLR7	51284	genome.wustl.edu	37	X	12903909	12903909	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016562.3	+1	reviewed	p.I94	0.167	142	0%	171	25.1%	0	-	-	-	-	superfamily_L domain-like
TLR7	51284	genome.wustl.edu	37	X	12904019	12904019	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016562.3	+1	reviewed	p.S131F	1.000	63	0%	55	25.5%	0	-	possibly_damaging(0.922)	deleterious(0.01)	deleterious(0.777)	HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like
TLR7	51284	genome.wustl.edu	37	X	12904869	12904869	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016562.3	+1	reviewed	p.L414	0.848	33	0%	42	38.1%	0	-	-	-	-	HMMSmart_SM00369,HMMSmart_SM00365,superfamily_L domain-like
TLR8	51311	genome.wustl.edu	37	X	12939565	12939565	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138636.4	+1	reviewed	p.I802M	0.000	221	0%	189	28.6%	0	-	benign(0.171)	tolerated(0.06)	neutral(0.338)	HMMSmart_LRRCT
OFD1	8481	genome.wustl.edu	37	X	13786877	13786877	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003611.2	+1	reviewed	p.T990M	0.020	204	0.5%	263	32.7%	51	23.5%	unknown(0)	tolerated(1)	-	NULL
GPM6B	2824	genome.wustl.edu	37	X	13801510	13801510	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001995.1	-1	reviewed	p.A167T	0.998	156	0%	252	34.1%	4	0%	benign(0.001)	tolerated(0.67)	neutral(0.003)	HMMPfam_Myelin_PLP
GLRA2	2742	genome.wustl.edu	37	X	14550433	14550433	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001118885.1	+1	reviewed	p.F47L	1.000	226	0%	169	29%	0	-	benign(0.178)	tolerated(0.19)	neutral(0.066)	HMMPfam_Neur_chan_LBD,superfamily_Nicotinic receptor ligand binding domain-like
GLRA2	2742	genome.wustl.edu	37	X	14748577	14748577	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001118885.1	+1	reviewed	p.I443	1.000	176	0%	207	32.4%	0	-	-	-	-	superfamily_Neurotransmitter-gated ion-channel transmembrane pore
FANCB	2187	genome.wustl.edu	37	X	14862650	14862650	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001018113.1	-1	reviewed	p.E714K	1.000	54	0%	47	23.4%	0	-	possibly_damaging(0.5)	deleterious(0.05)	deleterious(0.512)	NULL
FANCB	2187	genome.wustl.edu	37	X	14877446	14877446	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001018113.1	-1	reviewed	p.K321T	0.005	150	0%	158	26.6%	1	0%	probably_damaging(0.961)	tolerated(0.18)	neutral(0.460)	NULL
MOSPD2	158747	genome.wustl.edu	37	X	14929461	14929461	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152581.3	+1	validated	p.E269*	1.000	192	0%	212	34%	4	0%	-	-	-	superfamily_CRAL/TRIO domain
ASB11	140456	genome.wustl.edu	37	X	15311417	15311417	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080873.1	-1	reviewed	p.A132V	1.000	61	0%	126	35.7%	0	-	benign(0.001)	tolerated(0.43)	neutral(0.013)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
ASB11	140456	genome.wustl.edu	37	X	15333571	15333571	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080873.1	-1	reviewed	p.E53*	1.000	147	0%	115	42.6%	0	-	-	-	-	superfamily_ANK
PIGA	5277	genome.wustl.edu	37	X	15349660	15349660	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002641.2	-1	reviewed	p.F131	1.000	193	0%	367	37.6%	2	100%	-	-	-	HMMPfam_PIGA,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase
BMX	660	genome.wustl.edu	37	X	15540559	15540559	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001721.6	+1	reviewed	p.N201H	0.011	204	0%	159	36.5%	0	-	benign(0.003)	tolerated(0.11)	neutral(0.272)	NULL
TMEM27	57393	genome.wustl.edu	37	X	15677192	15677192	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020665.4	-1	reviewed	p.F50L	1.000	237	0%	272	27.9%	1	100%	benign(0.008)	deleterious(0)	neutral(0.445)	NULL
CA5B	11238	genome.wustl.edu	37	X	15782766	15782766	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007220.3	+1	reviewed	p.R70W	1.000	149	0%	237	19%	3	0%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_Carb_anhydrase,superfamily_Carbonic anhydrase
ZRSR2	8233	genome.wustl.edu	37	X	15809114	15809114	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005089.3	+1	reviewed	p.E33	0.991	99	0%	235	25.5%	7	14.2%	-	-	-	NULL
AP1S2	8905	genome.wustl.edu	37	X	15870612	15870612	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000452376	-1	known	p.A9T	1.000	297	0%	496	32.1%	3	0%	-	-	-	HMMPfam_Clat_adaptor_s,superfamily_SNARE-like
CTPS2	56474	genome.wustl.edu	37	X	16717107	16717107	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144002.1	-1	reviewed	p.K92N	1.000	161	0%	265	34.3%	9	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_CTP_synth_N,superfamily_P-loop containing nucleoside triphosphate hydrolases
RBBP7	5931	genome.wustl.edu	37	X	16887335	16887335	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002893.3	-1	reviewed	p.D9Y	1.000	85	0%	175	23.4%	40	50%	possibly_damaging(0.946)	deleterious(0)	deleterious(0.835)	NULL
NHS	4810	genome.wustl.edu	37	X	17742544	17742544	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198270.2	+1	reviewed	p.E391*	1.000	218	0%	376	31.9%	1	100%	-	-	-	NULL
NHS	4810	genome.wustl.edu	37	X	17743589	17743589	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198270.2	+1	reviewed	p.L434M	1.000	169	0%	262	37%	2	0%	probably_damaging(0.99)	tolerated(0.19)	deleterious(0.491)	NULL
NHS	4810	genome.wustl.edu	37	X	17743916	17743916	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198270.2	+1	reviewed	p.A543T	0.996	69	0%	73	19.2%	1	100%	benign(0)	tolerated(0.26)	neutral(0.034)	NULL
NHS	4810	genome.wustl.edu	37	X	17750027	17750027	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198270.2	+1	reviewed	p.R1446*	0.913	114	0%	140	35.7%	4	0%	-	-	-	NULL
SCML1	6322	genome.wustl.edu	37	X	17764185	17764185	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037540.1	+1	validated	p.L55	0.000	195	0%	229	26.2%	1	0%	-	-	-	NULL
RAI2	10742	genome.wustl.edu	37	X	17819663	17819663	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021785.4	-1	reviewed	p.F156	1.000	69	0%	106	34.9%	2	50%	-	-	-	NULL
BEND2	139105	genome.wustl.edu	37	X	18192281	18192281	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153346.4	-1	validated	p.S617Y	0.020	209	0%	243	32.9%	0	-	possibly_damaging(0.952)	deleterious(0)	deleterious(0.840)	NULL
BEND2	139105	genome.wustl.edu	37	X	18192350	18192350	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153346.4	-1	validated	p.T594I	0.001	177	0%	179	29.6%	0	-	possibly_damaging(0.952)	tolerated(0.13)	deleterious(0.648)	NULL
SCML2	10389	genome.wustl.edu	37	X	18264783	18264783	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006089.2	-1	validated	p.G579D	0.003	199	0%	252	35.3%	1	0%	probably_damaging(1)	tolerated(0.26)	deleterious(0.534)	NULL
SCML2	10389	genome.wustl.edu	37	X	18264944	18264944	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000420857	-1	known	p.N41S	0.657	49	0%	61	37.7%	1	0%	-	-	-	NULL
CDKL5	6792	genome.wustl.edu	37	X	18593495	18593495	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037343.1	+1	reviewed	p.T56M	1.000	273	0%	255	27.8%	0	-	probably_damaging(1)	deleterious(0.01)	deleterious(0.905)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
RS1	6247	genome.wustl.edu	37	X	18674831	18674831	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000330.3	-1	reviewed	p.C42	0.997	79	0%	123	37.4%	0	-	-	-	-	NULL
PPEF1	5475	genome.wustl.edu	37	X	18748330	18748330	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006240.2	+1	reviewed	p.W26*	1.000	152	0%	279	31.9%	0	-	-	-	-	HMMPfam_IQ,HMMSmart_SM00015
PPEF1	5475	genome.wustl.edu	37	X	18767978	18767978	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006240.2	+1	reviewed	p.D102Y	0.034	151	0%	217	30.9%	0	-	probably_damaging(0.961)	deleterious(0.01)	deleterious(0.810)	HMMPfam_PPP5,superfamily_Metallo-dependent phosphatases
PDHA1	5160	genome.wustl.edu	37	X	19369512	19369512	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000284.3	+1	reviewed	p.L135	0.471	112	0%	141	31.9%	58	0%	-	-	-	HMMPfam_E1_dh,superfamily_Thiamin diphosphate-binding fold (THDP-binding)
PDHA1	5160	genome.wustl.edu	37	X	19377050	19377050	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000284.3	+1	reviewed	p.E306*	1.000	154	0%	400	28%	146	0%	-	-	-	HMMPfam_E1_dh,superfamily_Thiamin diphosphate-binding fold (THDP-binding)
MAP3K15	389840	genome.wustl.edu	37	X	19392701	19392701	+	Silent	SNP	G	G	A	rs185966397	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001001671.3	-1	validated	p.F364	1.000	176	0%	298	36.2%	0	-	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
CXorf23	256643	genome.wustl.edu	37	X	19947910	19947910	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198279.3	-1	validated	p.K671T	1.000	68	0%	100	34%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MAP7D2	256714	genome.wustl.edu	37	X	20060710	20060710	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152780.3	-1	validated	p.S265Y	0.034	109	0%	111	36%	0	-	unknown(0)	deleterious(0.04)	-	NULL
RPS6KA3	6197	genome.wustl.edu	37	X	20185793	20185793	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004586.2	-1	reviewed	p.L506I	1.000	220	0%	294	28.9%	1	0%	probably_damaging(0.988)	tolerated(0.21)	deleterious(0.481)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
RPS6KA3	6197	genome.wustl.edu	37	X	20204442	20204442	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004586.2	-1	reviewed	p.R273*	1.000	275	0%	362	23.2%	5	0%	-	-	-	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
CNKSR2	22866	genome.wustl.edu	37	X	21393035	21393035	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014927.3	+1	reviewed	p.P7L	0.986	92	0%	132	29.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SAM/Pointed domain
CNKSR2	22866	genome.wustl.edu	37	X	21550085	21550085	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014927.3	+1	reviewed	p.K401N	1.000	155	0%	55	30.9%	0	-	benign(0.177)	tolerated(0.05)	neutral(0.362)	HMMPfam_DUF1170
CNKSR2	22866	genome.wustl.edu	37	X	21627418	21627418	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014927.3	+1	reviewed	p.S792F	0.998	158	0%	123	33.3%	0	-	possibly_damaging(0.91)	deleterious(0)	deleterious(0.807)	NULL
SMS	6611	genome.wustl.edu	37	X	22002476	22002476	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004595.2	+1	reviewed	p.E269K	1.000	207	0%	304	27%	80	0%	benign(0)	tolerated(1)	-	HMMPfam_Spermine_synth,superfamily_S-adenosyl-L-methionine-dependent methyltransferases
PHEX	5251	genome.wustl.edu	37	X	22095808	22095808	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000444.4	+1	reviewed	p.E217	0.995	139	0%	158	32.9%	0	-	-	-	-	HMMPfam_Peptidase_M13_N,superfamily_SSF55486
PHEX	5251	genome.wustl.edu	37	X	22129611	22129611	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000444.4	+1	reviewed	p.R369I	1.000	283	0%	434	33.4%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Peptidase_M13_N,superfamily_SSF55486
ZNF645	158506	genome.wustl.edu	37	X	22291957	22291957	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152577.2	+1	provisional	p.A283	0.000	140	0%	181	35.4%	0	-	-	-	-	NULL
DDX53	168400	genome.wustl.edu	37	X	23018618	23018618	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182699.2	+1	validated	p.E148D	0.007	210	0%	306	28.8%	0	-	benign(0)	tolerated(0.46)	neutral(0.012)	superfamily_SSF52540
DDX53	168400	genome.wustl.edu	37	X	23018991	23018991	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182699.2	+1	validated	p.T273A	0.926	109	0%	144	25%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_DEAD,HMMSmart_DEXDc,superfamily_SSF52540
LOC653707	653707	genome.wustl.edu	37	X	23216638	23216638	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343798.1	+1	model	p.F61	0.300	292	0%	340	39.7%	0	-	-	-	-	NULL
PTCHD1	139411	genome.wustl.edu	37	X	23397827	23397827	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173495.2	+1	validated	p.L157	1.000	121	0%	143	33.6%	0	-	-	-	-	HMMPfam_Patched
PTCHD1	139411	genome.wustl.edu	37	X	23411466	23411466	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173495.2	+1	validated	p.D611Y	1.000	80	0%	68	42.6%	0	-	possibly_damaging(0.68)	deleterious(0.01)	deleterious(0.648)	HMMPfam_Patched
PTCHD1	139411	genome.wustl.edu	37	X	23412226	23412226	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173495.2	+1	validated	p.N864S	1.000	103	0%	101	29.7%	0	-	benign(0.075)	deleterious(0.03)	neutral(0.369)	NULL
CXorf58	254158	genome.wustl.edu	37	X	23934380	23934380	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152761.2	+1	validated	p.L120I	0.822	240	0%	372	29.3%	0	-	benign(0.418)	tolerated(0.58)	neutral(0.141)	NULL
KLHL15	80311	genome.wustl.edu	37	X	24007103	24007103	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030624.2	-1	reviewed	p.Y250	0.997	45	0%	53	26.4%	2	50%	-	-	-	NULL
ZFX	7543	genome.wustl.edu	37	X	24228434	24228434	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003410.3	+1	reviewed	p.K453N	1.000	228	0%	443	35%	6	50%	benign(0.003)	tolerated(0.22)	neutral(0.042)	superfamily_C2H2 and C2HC zinc fingers
FAM48B1	100130302	genome.wustl.edu	37	X	24381222	24381222	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136234.1	+1	inferred	p.Y115*	1.000	316	0%	499	23.2%	0	-	-	-	-	NULL
FAM48B1	100130302	genome.wustl.edu	37	X	24381235	24381235	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136234.1	+1	inferred	p.E120*	1.000	310	0%	507	23.1%	0	-	-	-	-	NULL
PDK3	5165	genome.wustl.edu	37	X	24521502	24521502	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142386.2	+1	reviewed	p.A127T	1.000	238	0.4%	372	28.5%	6	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_BCDHK_Adom3,superfamily_SSF69012
POLA1	5422	genome.wustl.edu	37	X	24859883	24859883	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016937.3	+1	reviewed	p.R1278I	1.000	397	0%	364	38.7%	12	83.3%	benign(0.204)	tolerated(0.06)	neutral(0.342)	HMMPfam_zf-DNA_Pol
LOC389842	389842	genome.wustl.edu	37	X	25663998	25663998	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_372200.7	-1	model	p.Q149H	1.000	86	0%	141	29.8%	127	0%	-	-	-	HMMPfam_Ran_BP1,HMMSmart_SM00160,superfamily_PH domain-like
LOC389842	389842	genome.wustl.edu	37	X	25664350	25664350	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_372200.7	-1	model	p.S32F	1.000	67	0%	80	33.8%	0	-	-	-	-	HMMSmart_SM00160,superfamily_PH domain-like
MAGEB18	286514	genome.wustl.edu	37	X	26157753	26157753	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173699.3	+1	validated	p.E217	0.002	101	0%	161	35.4%	0	-	-	-	-	HMMPfam_MAGE
MAGEB6	158809	genome.wustl.edu	37	X	26212236	26212236	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173523.2	+1	reviewed	p.E91D	0.000	188	0%	217	30%	1	0%	possibly_damaging(0.653)	tolerated(0.12)	deleterious(0.490)	NULL
DCAF8L2	347442	genome.wustl.edu	37	X	27766253	27766253	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136533.1	+1	provisional	p.H414R	1.000	229	0%	389	30.8%	0	-	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like
DCAF8L2	347442	genome.wustl.edu	37	X	27766549	27766549	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136533.1	+1	provisional	p.E513*	0.022	193	0%	281	31.7%	0	-	-	-	-	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
DCAF8L2	347442	genome.wustl.edu	37	X	27766759	27766759	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136533.1	+1	provisional	p.L583F	1.000	101	0%	154	26.6%	0	-	-	-	-	NULL
DCAF8L2	347442	genome.wustl.edu	37	X	27766886	27766886	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136533.1	+1	provisional	p.R625Q	0.000	50	0%	43	44.2%	0	-	-	-	-	NULL
MAGEB10	139422	genome.wustl.edu	37	X	27839676	27839676	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182506.3	+1	reviewed	p.G85*	0.000	114	0%	131	32.8%	0	-	-	-	-	NULL
MAGEB10	139422	genome.wustl.edu	37	X	27839758	27839758	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182506.3	+1	reviewed	p.D112G	0.008	120	0%	137	29.2%	0	-	benign(0.003)	tolerated(0.1)	neutral(0.286)	NULL
MAGEB10	139422	genome.wustl.edu	37	X	27840281	27840281	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182506.3	+1	reviewed	p.M286I	0.853	206	0%	224	31.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MAGE
DCAF8L1	139425	genome.wustl.edu	37	X	27997948	27997948	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017930.1	-1	reviewed	p.D502Y	0.249	185	0%	194	29.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_WD40,superfamily_WD40_like,HMMPfam_WD40
DCAF8L1	139425	genome.wustl.edu	37	X	27998711	27998711	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017930.1	-1	reviewed	p.F247L	1.000	89	0%	105	34.3%	0	-	probably_damaging(0.987)	deleterious(0.02)	deleterious(0.820)	HMMSmart_WD40,superfamily_WD40_like
DCAF8L1	139425	genome.wustl.edu	37	X	27999214	27999214	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001017930.1	-1	reviewed	p.E80K	0.514	347	0%	454	33.3%	0	-	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
IL1RAPL1	11141	genome.wustl.edu	37	X	29301120	29301120	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014271.3	+1	reviewed	p.R50*	1.000	359	0%	382	33.2%	0	-	-	-	-	HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
IL1RAPL1	11141	genome.wustl.edu	37	X	29938065	29938065	+	Splice_Site	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014271.3	+1	reviewed	e7-1	1.000	443	0%	677	30%	0	-	-	-	-	-
MAGEB2	4113	genome.wustl.edu	37	X	30237366	30237366	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002364.4	+1	reviewed	p.I223	0.130	187	0%	297	29.3%	0	-	-	-	-	HMMPfam_MAGE
MAGEB4	4115	genome.wustl.edu	37	X	30260594	30260594	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002367.3	+1	reviewed	p.K114N	0.000	72	0%	116	37.9%	0	-	benign(0.221)	tolerated(0.49)	neutral(0.033)	NULL
MAGEB1	4112	genome.wustl.edu	37	X	30269041	30269041	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002363.4	+1	reviewed	p.D144G	0.000	94	0%	141	37.6%	0	-	benign(0)	tolerated(0.16)	neutral(0.059)	HMMPfam_MAGE
NR0B1	190	genome.wustl.edu	37	X	30326388	30326388	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000475.4	-1	reviewed	p.L365I	1.000	83	0%	128	26.6%	0	-	probably_damaging(0.979)	deleterious(0.03)	deleterious(0.786)	HMMPfam_Hormone_recep,HMMSmart_SM00430,superfamily_Nuclear receptor ligand-binding domain
CXorf21	80231	genome.wustl.edu	37	X	30578162	30578162	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025159.2	-1	validated	p.R104I	0.782	118	0%	160	30.6%	0	-	possibly_damaging(0.545)	deleterious(0.01)	deleterious(0.591)	NULL
GK	2710	genome.wustl.edu	37	X	30714241	30714241	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128127.1	+1	reviewed	p.S212Y	1.000	256	0%	393	26.7%	1	0%	benign(0.403)	deleterious(0)	deleterious(0.574)	HMMPfam_FGGY_N,superfamily_SSF53067
GK	2710	genome.wustl.edu	37	X	30738819	30738819	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128127.1	+1	reviewed	p.L434I	1.000	216	0%	314	35.7%	2	0%	probably_damaging(0.992)	deleterious(0.02)	deleterious(0.831)	HMMPfam_FGGY_C,superfamily_SSF53067
TAB3	257397	genome.wustl.edu	37	X	30849648	30849648	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152787.3	-1	reviewed	p.D679N	1.000	249	0%	327	26%	3	0%	possibly_damaging(0.928)	deleterious(0.04)	deleterious(0.724)	NULL
TAB3	257397	genome.wustl.edu	37	X	30873103	30873103	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152787.3	-1	reviewed	p.P227T	1.000	192	0%	229	31%	3	0%	probably_damaging(0.996)	tolerated(0.4)	deleterious(0.478)	NULL
DMD	1756	genome.wustl.edu	37	X	31144820	31144820	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000465285	-1	known	p.S1400R	0.925	142	0%	105	24.8%	0	-	benign(0.106)	tolerated(0.06)	neutral(0.331)	NULL
DMD	1756	genome.wustl.edu	37	X	31164466	31164466	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000465285	-1	known	p.R1350*	1.000	135	0%	147	24.5%	1	0%	-	-	-	NULL
DMD	1756	genome.wustl.edu	37	X	31224765	31224765	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004006.2	-1	reviewed	p.R3195fs	1.000	-	-	-	-	-	-	-	-	-	HMMPfam_efhand_1,superfamily_EF-hand
DMD	1756	genome.wustl.edu	37	X	31227737	31227737	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000465285	-1	known	p.P876T	1.000	193	0%	265	30.2%	1	0%	-	-	-	HMMPfam_efhand_1,superfamily_EF-hand
DMD	1756	genome.wustl.edu	37	X	31792263	31792263	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000465285	-1	known	p.G181*	1.000	146	0%	144	28.5%	0	-	probably_damaging(0.983)	tolerated(0.14)	deleterious(0.678)	NULL
DMD	1756	genome.wustl.edu	37	X	31893303	31893303	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004006.2	-1	reviewed	e48+2	0.986	228	0%	163	30.7%	0	-	-	-	-	-
DMD	1756	genome.wustl.edu	37	X	32328197	32328197	+	Splice_Site	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004006.2	-1	reviewed	e42+2	1.000	124	0%	78	24.4%	0	-	-	-	-	-
DMD	1756	genome.wustl.edu	37	X	32328373	32328373	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004006.2	-1	reviewed	p.T1981	0.970	198	0%	117	32.5%	0	-	-	-	-	NULL
DMD	1756	genome.wustl.edu	37	X	32380921	32380921	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004006.2	-1	reviewed	p.R1770I	1.000	306	0%	369	35%	1	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DMD	1756	genome.wustl.edu	37	X	32398787	32398787	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004006.2	-1	reviewed	p.R1562I	1.000	278	0%	177	32.2%	1	100%	benign(0.317)	tolerated(0.06)	neutral(0.421)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DMD	1756	genome.wustl.edu	37	X	32456383	32456383	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004006.2	-1	reviewed	p.S1349Y	1.000	300	0%	248	33.1%	1	0%	possibly_damaging(0.654)	deleterious(0.01)	deleterious(0.636)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DMD	1756	genome.wustl.edu	37	X	32486814	32486814	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004006.2	-1	reviewed	p.S988Y	1.000	156	0%	138	30.4%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DMD	1756	genome.wustl.edu	37	X	32563314	32563314	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004006.2	-1	reviewed	p.K710N	1.000	451	0.2%	369	33.3%	2	50%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	superfamily_Spectrin repeat
DMD	1756	genome.wustl.edu	37	X	32613950	32613950	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004006.2	-1	reviewed	p.S509Y	1.000	375	0%	347	34.3%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat
DMD	1756	genome.wustl.edu	37	X	32834697	32834697	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004006.2	-1	reviewed	p.L140I	1.000	406	0.2%	386	26.7%	0	-	probably_damaging(0.995)	deleterious(0.02)	deleterious(0.841)	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
FAM47A	158724	genome.wustl.edu	37	X	34148781	34148781	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203408.3	-1	validated	p.R539*	0.002	123	0%	109	37.6%	0	-	-	-	-	NULL
FAM47B	170062	genome.wustl.edu	37	X	34962330	34962330	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152631.2	+1	validated	p.R461K	0.002	233	0%	454	37.2%	0	-	benign(0.117)	tolerated(0.56)	neutral(0.016)	NULL
FAM47B	170062	genome.wustl.edu	37	X	34962649	34962649	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152631.2	+1	validated	p.L567F	0.508	172	0%	256	32%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
FAM47B	170062	genome.wustl.edu	37	X	34962875	34962875	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152631.2	+1	validated	p.K643Q	0.001	67	0%	104	19.2%	0	-	benign(0.072)	tolerated(0.23)	neutral(0.046)	NULL
CXorf22	170063	genome.wustl.edu	37	X	35944257	35944257	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152632.3	+1	validated	p.N125H	0.101	118	0%	113	39.8%	0	-	possibly_damaging(0.442)	tolerated(0.11)	neutral(0.416)	NULL
CXorf22	170063	genome.wustl.edu	37	X	35988963	35988963	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152632.3	+1	validated	p.K631N	0.000	125	0%	103	31.1%	0	-	benign(0.001)	tolerated(0.12)	neutral(0.261)	NULL
CXorf59	286464	genome.wustl.edu	37	X	36103568	36103568	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173695.2	+1	validated	p.N185T	0.000	139	0%	130	33.8%	0	-	benign(0.017)	tolerated(0.52)	neutral(0.009)	NULL
CXorf30	645090	genome.wustl.edu	37	X	36322013	36322013	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098843.3	+1	validated	p.K120Q	0.982	236	0%	212	34.4%	0	-	benign(0.039)	tolerated(0.6)	neutral(0.006)	NULL
CXorf30	645090	genome.wustl.edu	37	X	36371715	36371715	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098843.3	+1	validated	p.G370R	0.000	247	0.4%	256	30.5%	0	-	probably_damaging(1)	tolerated(0.47)	deleterious(0.511)	NULL
CXorf30	645090	genome.wustl.edu	37	X	36403121	36403121	+	Nonstop_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001098843.3	+1	validated	p.*634Y	0.997	89	0%	94	52.1%	0	-	-	-	-	NULL
FAM47C	442444	genome.wustl.edu	37	X	37026638	37026638	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013736.2	+1	validated	p.T52M	0.000	209	0%	213	39%	0	-	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	NULL
FAM47C	442444	genome.wustl.edu	37	X	37028454	37028454	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013736.2	+1	validated	p.E657D	0.000	156	0%	126	25.4%	0	-	probably_damaging(0.973)	tolerated(0.42)	neutral(0.429)	NULL
FAM47C	442444	genome.wustl.edu	37	X	37028992	37028992	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013736.2	+1	validated	p.E837*	0.020	178	0%	277	31%	0	-	-	-	-	NULL
FAM47C	442444	genome.wustl.edu	37	X	37029400	37029400	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013736.2	+1	validated	p.L973I	0.005	246	0%	307	29%	0	-	probably_damaging(0.998)	tolerated(0.19)	deleterious(0.524)	NULL
CXorf27	25763	genome.wustl.edu	37	X	37850249	37850249	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012274.1	+1	validated	p.L53F	0.000	146	0%	264	24.2%	0	-	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	superfamily_Histone-fold
SYTL5	94122	genome.wustl.edu	37	X	37931347	37931347	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138780.2	+1	reviewed	p.K126T	1.000	427	0%	359	29.8%	0	-	probably_damaging(0.998)	tolerated(0.11)	deleterious(0.746)	HMMPfam_RPH3A_effector,superfamily_FYVE_PHD_ZnF
SYTL5	94122	genome.wustl.edu	37	X	37955396	37955396	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138780.2	+1	reviewed	p.R324Q	0.998	229	0%	156	30.8%	0	-	benign(0.077)	tolerated(0.09)	neutral(0.302)	NULL
RPGR	6103	genome.wustl.edu	37	X	38145402	38145402	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034853.1	-1	reviewed	p.E950D	0.000	9	0.000	22	0.227	0	-	unknown(0)	tolerated(0.48)	-	NULL
RPGR	6103	genome.wustl.edu	37	X	38147249	38147249	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034853.1	-1	reviewed	p.E540*	0.043	434	0%	591	28.4%	6	0%	-	-	-	NULL
RPGR	6103	genome.wustl.edu	37	X	38176606	38176606	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034853.1	-1	reviewed	p.W194C	1.000	197	0%	210	27.1%	4	0%	benign(0.205)	deleterious(0.01)	neutral(0.426)	HMMPfam_RCC1,superfamily_RCC1/BLIP-II
CXorf38	159013	genome.wustl.edu	37	X	40498357	40498357	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144970.2	-1	validated	p.A125	0.785	182	0%	319	34.2%	2	0%	-	-	-	NULL
MED14	9282	genome.wustl.edu	37	X	40518692	40518692	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004229.3	-1	reviewed	p.F1284L	1.000	403	0.2%	573	31.9%	23	17.3%	possibly_damaging(0.942)	deleterious(0.01)	deleterious(0.792)	NULL
MED14	9282	genome.wustl.edu	37	X	40518847	40518847	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004229.3	-1	reviewed	p.N1233H	1.000	269	0%	439	34.6%	18	5.5%	probably_damaging(0.981)	deleterious(0.03)	deleterious(0.790)	NULL
USP9X	8239	genome.wustl.edu	37	X	41025143	41025143	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039590.2	+1	reviewed	p.G668	0.997	146	0%	241	26.6%	5	0%	-	-	-	NULL
USP9X	8239	genome.wustl.edu	37	X	41043261	41043261	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039590.2	+1	reviewed	p.T1053	1.000	294	0%	396	35.1%	2	100%	-	-	-	NULL
CASK	8573	genome.wustl.edu	37	X	41437686	41437686	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003688.3	-1	reviewed	p.G470	0.994	209	0%	333	36.3%	14	71.4%	-	-	-	NULL
GPR82	27197	genome.wustl.edu	37	X	41587144	41587144	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080817.4	+1	validated	p.E289*	1.000	98	0%	82	24.4%	0	-	-	-	-	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
CASK	8573	genome.wustl.edu	37	X	41712418	41712418	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003688.3	-1	reviewed	p.K41T	1.000	174	0%	310	31.6%	4	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
MAOA	4128	genome.wustl.edu	37	X	43571956	43571956	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000240.2	+1	reviewed	p.P139L	0.995	217	0%	195	39.5%	6	0%	possibly_damaging(0.842)	deleterious(0)	deleterious(0.766)	HMMPfam_Amino_oxidase,superfamily_FAD/NAD(P)-binding domain
EFHC2	80258	genome.wustl.edu	37	X	44091865	44091865	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025184.3	-1	validated	p.S494Y	0.811	235	0%	203	31.5%	3	0%	-	-	-	NULL
EFHC2	80258	genome.wustl.edu	37	X	44108076	44108076	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025184.3	-1	validated	p.R315Q	0.000	215	0%	278	31.7%	2	0%	-	-	-	NULL
EFHC2	80258	genome.wustl.edu	37	X	44120403	44120403	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_025184.3	-1	validated	p.E175*	0.995	89	0%	91	31.9%	0	-	probably_damaging(0.974)	deleterious(0.02)	deleterious(0.799)	NULL
KDM6A	7403	genome.wustl.edu	37	X	44870210	44870210	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021140.2	+1	reviewed	p.A130D	1.000	311	0%	518	31.3%	1	0%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SSF48452
KDM6A	7403	genome.wustl.edu	37	X	44945216	44945216	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021140.2	+1	reviewed	p.F1180L	1.000	436	0%	537	29.1%	9	22.2%	benign(0.045)	tolerated(0.81)	neutral(0.003)	HMMSmart_JmjC,HMMPfam_JmjC
ZNF674	641339	genome.wustl.edu	37	X	46360259	46360259	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039891.2	-1	validated	p.C255	0.009	207	0%	257	23%	10	0%	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF674	641339	genome.wustl.edu	37	X	46388270	46388270	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039891.2	-1	validated	p.K30N	0.976	217	0%	255	31.8%	2	0%	probably_damaging(0.958)	deleterious(0.01)	deleterious(0.807)	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
SLC9A7	84679	genome.wustl.edu	37	X	46466614	46466614	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032591.1	-1	reviewed	p.D651Y	1.000	78	0%	114	33.3%	5	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RP2	6102	genome.wustl.edu	37	X	46696581	46696581	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006915.2	+1	reviewed	p.R16W	0.990	49	0%	79	27.8%	11	0%	benign(0)	deleterious(0.02)	neutral(0.383)	NULL
RP2	6102	genome.wustl.edu	37	X	46719461	46719461	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006915.2	+1	reviewed	p.E269D	1.000	173	0%	299	28.4%	6	0%	possibly_damaging(0.78)	tolerated(0.1)	deleterious(0.578)	superfamily_NDK
RGN	9104	genome.wustl.edu	37	X	46940548	46940548	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004683.4	+1	reviewed	p.S2Y	1.000	301	0%	613	30.8%	0	-	probably_damaging(0.996)	deleterious(0.01)	deleterious(0.867)	superfamily_Calcium-dependent phosphotriesterase
RBM10	8241	genome.wustl.edu	37	X	47041363	47041363	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005676.3	+1	reviewed	p.V569	0.916	175	0%	352	25%	61	0%	-	-	-	NULL
RBM10	8241	genome.wustl.edu	37	X	47044502	47044502	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005676.3	+1	reviewed	p.E667*	1.000	77	0%	159	28.9%	86	0%	-	-	-	NULL
CDK16	5127	genome.wustl.edu	37	X	47082953	47082953	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033018.3	+1	reviewed	p.I5	1.000	124	0%	211	34.6%	25	96%	-	-	-	NULL
ZNF157	7712	genome.wustl.edu	37	X	47272757	47272757	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003446.3	+1	reviewed	p.L429I	0.401	145	0%	220	27.3%	0	-	benign(0.181)	deleterious(0)	neutral(0.461)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF157	7712	genome.wustl.edu	37	X	47272941	47272941	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003446.3	+1	reviewed	p.R490I	0.995	79	0%	155	40.6%	0	-	benign(0.198)	deleterious(0.03)	neutral(0.384)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF41	7592	genome.wustl.edu	37	X	47307439	47307439	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007130.2	-1	reviewed	p.R577I	0.969	170	0%	272	31.2%	2	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_C2H2 and C2HC zinc fingers
ZNF41	7592	genome.wustl.edu	37	X	47307516	47307516	+	Nonsense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007130.2	-1	reviewed	p.Y551*	0.846	237	0%	361	26.6%	4	0%	-	-	-	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers
ARAF	369	genome.wustl.edu	37	X	47428974	47428974	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001654.3	+1	reviewed	p.G446D	1.000	122	0%	153	31.4%	67	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_Kinase_like,HMMPfam_Pkinase
ZNF81	347344	genome.wustl.edu	37	X	47774361	47774361	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007137.3	+1	reviewed	p.S106P	0.001	43	0%	28	35.7%	2	0%	benign(0.038)	tolerated(0.3)	neutral(0.030)	NULL
ZNF182	7569	genome.wustl.edu	37	X	47835763	47835763	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006962.1	-1	reviewed	p.C575R	0.995	330	0%	346	31.2%	6	100%	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF182	7569	genome.wustl.edu	37	X	47835969	47835969	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006962.1	-1	reviewed	p.R506I	1.000	238	0%	246	34.6%	3	66.6%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
ZNF182	7569	genome.wustl.edu	37	X	47837174	47837174	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006962.1	-1	reviewed	p.Q104H	0.992	90	0%	90	32.2%	2	0%	possibly_damaging(0.528)	tolerated(0.13)	neutral(0.430)	NULL
ZNF630	57232	genome.wustl.edu	37	X	47918295	47918295	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001037735.2	-1	validated	p.E512D	1.000	158	0%	226	35%	3	0%	possibly_damaging(0.542)	deleterious(0.02)	deleterious(0.567)	superfamily_SSF57667
SSX6	280657	genome.wustl.edu	37	X	47976513	47976513	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000304314	+1	known	p.K191N	0.001	254	0%	444	32.9%	0	-	probably_damaging(0.997)	deleterious(0.01)	deleterious(0.872)	NULL
SSX1	6756	genome.wustl.edu	37	X	48118066	48118066	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005635.2	+1	reviewed	p.V94I	0.018	358	0%	612	30.1%	0	-	possibly_damaging(0.798)	tolerated(0.71)	neutral(0.302)	NULL
SSX9	280660	genome.wustl.edu	37	X	48156310	48156310	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000376909	-1	known	p.R171I	0.002	361	0%	607	19.6%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SSXRD
SSX3	10214	genome.wustl.edu	37	X	48209546	48209546	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021014.2	-1	reviewed	p.K114N	0.004	388	0%	647	32%	0	-	possibly_damaging(0.772)	deleterious(0.01)	deleterious(0.693)	NULL
SSX3	10214	genome.wustl.edu	37	X	48211595	48211595	+	Nonsense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000376895	-1	known	p.Y2*	0.000	308	0%	466	29.4%	0	-	-	-	-	NULL
SSX4	6759	genome.wustl.edu	37	X	48244008	48244008	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005636.3	+1	reviewed	p.F25	0.004	110	0%	258	16.3%	0	-	-	-	-	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
SSX4	6759	genome.wustl.edu	37	X	48244833	48244833	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005636.3	+1	reviewed	p.R75Q	0.000	594	0.2%	1100	14.5%	0	-	probably_damaging(0.963)	tolerated(0.11)	deleterious(0.677)	HMMSmart_KRAB,superfamily_Krueppel-associated_box
SSX4B	548313	genome.wustl.edu	37	X	48270229	48270229	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034832.2	-1	reviewed	p.Y50H	0.054	600	0%	968	16%	0	-	probably_damaging(1)	tolerated(0.31)	deleterious(0.527)	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
SSX4B	548313	genome.wustl.edu	37	X	48270302	48270302	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001034832.2	-1	reviewed	p.F25	0.001	439	0%	631	12.4%	0	-	-	-	-	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
WDR13	64743	genome.wustl.edu	37	X	48458814	48458814	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017883.4	+1	reviewed	p.R211C	0.995	19	0%	47	38.3%	151	1.3%	benign(0)	tolerated(0.18)	neutral(0.056)	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40
SUV39H1	6839	genome.wustl.edu	37	X	48565905	48565905	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003173.2	+1	reviewed	p.R395W	1.000	91	0%	105	32.4%	3	100%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	superfamily_SET domain
HDAC6	10013	genome.wustl.edu	37	X	48674023	48674023	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006044.2	+1	reviewed	p.P433L	0.619	296	0%	589	36.5%	12	0%	possibly_damaging(0.937)	deleterious(0.01)	deleterious(0.788)	superfamily_SSF52768
HDAC6	10013	genome.wustl.edu	37	X	48681420	48681420	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006044.2	+1	reviewed	p.E871*	0.000	83	0%	165	23%	29	0%	-	-	-	NULL
ERAS	3266	genome.wustl.edu	37	X	48687550	48687550	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_181532.2	+1	provisional	p.K6T	0.001	36	0%	39	43.6%	0	-	benign(0.135)	deleterious(0)	neutral(0.456)	NULL
TIMM17B	10245	genome.wustl.edu	37	X	48752378	48752378	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005834.3	-1	reviewed	p.R45W	0.260	129	0%	236	33.1%	118	1.6%	probably_damaging(0.999)	deleterious(0.03)	deleterious(0.855)	HMMPfam_Tim17
SLC35A2	7355	genome.wustl.edu	37	X	48762045	48762045	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005660.1	-1	provisional	p.I381V	0.885	74	0%	134	33.6%	55	81.8%	unknown(0)	tolerated(0.23)	-	NULL
PIM2	11040	genome.wustl.edu	37	X	48776111	48776111	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006875.3	-1	reviewed	p.M1V	1.000	27	0%	28	17.9%	7	0%	benign(0.001)	deleterious(0)	neutral(0.445)	NULL
GRIPAP1	56850	genome.wustl.edu	37	X	48831684	48831684	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020137.3	-1	reviewed	p.G772	1.000	57	0%	53	26.4%	63	0%	-	-	-	NULL
GRIPAP1	56850	genome.wustl.edu	37	X	48844550	48844550	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020137.3	-1	reviewed	p.R311W	1.000	98	0%	99	36.4%	33	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
PRICKLE3	4007	genome.wustl.edu	37	X	49032195	49032195	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006150.3	-1	reviewed	p.D559N	1.000	67	0%	130	35.4%	25	0%	benign(0.007)	deleterious(0)	neutral(0.445)	NULL
PRICKLE3	4007	genome.wustl.edu	37	X	49034343	49034343	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000453382	-1	known	p.R331W	0.202	38	0%	37	32.4%	14	92.8%	-	-	-	HMMPfam_LIM,HMMSmart_SM00132,superfamily_Glucocorticoid receptor-like (DNA-binding domain)
PRICKLE3	4007	genome.wustl.edu	37	X	49040322	49040322	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000453382	-1	known	p.R72C	0.001	45	0%	57	22.8%	8	0%	-	-	-	NULL
SYP	6855	genome.wustl.edu	37	X	49049761	49049761	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003179.2	-1	reviewed	p.D195Y	1.000	172	0%	235	31.5%	8	0%	probably_damaging(0.98)	tolerated(1)	neutral(0.424)	HMMPfam_MARVEL
CACNA1F	778	genome.wustl.edu	37	X	49065678	49065678	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000486943	-1	known	p.Y87C	0.004	301	0%	430	37.2%	0	-	unknown(0)	-	-	NULL
CACNA1F	778	genome.wustl.edu	37	X	49067543	49067543	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005183.2	-1	reviewed	p.L1435I	1.000	92	0%	170	30.6%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Ion_trans,superfamily_Voltage-gated potassium channels
CACNA1F	778	genome.wustl.edu	37	X	49088171	49088171	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005183.2	-1	reviewed	p.R82*	0.997	106	0%	137	32.1%	0	-	-	-	-	superfamily_Voltage-gated potassium channels
CCDC22	28952	genome.wustl.edu	37	X	49099751	49099751	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014008.3	+1	validated	p.E179D	0.947	39	0%	51	29.4%	23	0%	possibly_damaging(0.459)	tolerated(0.21)	neutral(0.195)	HMMPfam_DUF812
CCDC22	28952	genome.wustl.edu	37	X	49106139	49106139	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014008.3	+1	validated	p.E575K	1.000	66	0%	79	32.9%	46	84.7%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DUF812
PPP1R3F	89801	genome.wustl.edu	37	X	49143300	49143300	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033215.4	+1	reviewed	p.L716	0.000	64	0%	105	32.4%	0	-	-	-	-	NULL
PAGE4	9506	genome.wustl.edu	37	X	49595684	49595684	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007003.2	+1	reviewed	p.E55K	0.001	183	0%	290	33.8%	4	25%	possibly_damaging(0.763)	-	-	HMMPfam_GAGE
PAGE4	9506	genome.wustl.edu	37	X	49597195	49597195	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007003.2	+1	reviewed	p.G78	0.000	173	0%	252	34.1%	3	0%	-	-	-	HMMPfam_GAGE
USP27X	389856	genome.wustl.edu	37	X	49644959	49644959	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145073.1	+1	provisional	p.E17*	1.000	81	0%	162	36.4%	2	0%	-	-	-	NULL
AKAP4	8852	genome.wustl.edu	37	X	49958460	49958460	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003886.2	-1	reviewed	p.L302I	0.943	104	0%	89	24.7%	0	-	benign(0.244)	tolerated(0.21)	neutral(0.069)	HMMPfam_AKAP_110,HMMSmart_SM00807
CCNB3	85417	genome.wustl.edu	37	X	50051905	50051905	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033031.2	+1	reviewed	p.E246*	0.000	90	0%	63	36.5%	0	-	-	-	-	NULL
CCNB3	85417	genome.wustl.edu	37	X	50053330	50053330	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033031.2	+1	reviewed	p.E721*	0.001	42	0%	27	40.7%	0	-	-	-	-	NULL
CCNB3	85417	genome.wustl.edu	37	X	50053393	50053393	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033031.2	+1	reviewed	p.N742H	0.001	36	0%	30	36.7%	0	-	possibly_damaging(0.923)	deleterious(0.02)	deleterious(0.756)	NULL
CCNB3	85417	genome.wustl.edu	37	X	50053926	50053926	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033031.2	+1	reviewed	p.S919	0.000	173	0%	156	34%	0	-	-	-	-	NULL
CCNB3	85417	genome.wustl.edu	37	X	50054196	50054196	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033031.2	+1	reviewed	p.F1009	0.000	166	0.6%	157	33.1%	1	100%	-	-	-	NULL
SHROOM4	57477	genome.wustl.edu	37	X	50341324	50341324	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020717.3	-1	reviewed	p.R1385Q	1.000	155	0%	210	29%	3	0%	probably_damaging(0.997)	deleterious(0.02)	deleterious(0.849)	HMMPfam_ASD2
GSPT2	23708	genome.wustl.edu	37	X	51487067	51487067	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018094.4	+1	reviewed	p.E115D	0.981	61	0%	86	37.2%	2	0%	benign(0)	tolerated(0.37)	neutral(0.019)	NULL
GSPT2	23708	genome.wustl.edu	37	X	51487680	51487680	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018094.4	+1	reviewed	p.E320K	1.000	390	0.3%	587	34.6%	1	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_GTP_EFTU,superfamily_SSF52540
GSPT2	23708	genome.wustl.edu	37	X	51488603	51488603	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018094.4	+1	reviewed	p.K627	0.989	146	0%	168	36.9%	1	0%	-	-	-	NULL
MAGED1	9500	genome.wustl.edu	37	X	51640956	51640956	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005333.1	+1	reviewed	p.P600	0.875	185	0%	268	32.5%	384	0%	-	-	-	HMMPfam_MAGE
MAGED1	9500	genome.wustl.edu	37	X	51644761	51644761	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001005333.1	+1	reviewed	p.R747I	0.992	173	0%	219	34.7%	526	79.2%	unknown(0)	deleterious(0)	-	NULL
TSPYL2	64061	genome.wustl.edu	37	X	53114483	53114483	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022117.3	+1	reviewed	p.K406N	1.000	313	0.3%	751	26.5%	25	0%	probably_damaging(0.98)	deleterious(0.01)	deleterious(0.830)	NULL
TSPYL2	64061	genome.wustl.edu	37	X	53115256	53115256	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022117.3	+1	reviewed	p.S561N	1.000	344	0%	838	31.5%	67	0%	benign(0.204)	deleterious(0.01)	neutral(0.425)	NULL
KDM5C	8242	genome.wustl.edu	37	X	53228018	53228018	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004187.3	-1	reviewed	p.R766W	1.000	148	0%	238	28.6%	58	20.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
IQSEC2	23096	genome.wustl.edu	37	X	53272619	53272619	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001111125.1	-1	validated	p.L928	0.993	72	0%	103	35%	0	-	-	-	-	HMMPfam_Sec7,HMMSmart_Sec7,superfamily_Sec7
SMC1A	8243	genome.wustl.edu	37	X	53426535	53426535	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006306.2	-1	reviewed	p.E846	0.996	617	0.2%	1103	30.5%	15	26.6%	-	-	-	HMMPfam_SMC_N,superfamily_SSF52540
HUWE1	10075	genome.wustl.edu	37	X	53565805	53565805	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031407.4	-1	reviewed	p.R3957C	1.000	93	0%	189	34.4%	102	0%	unknown(0)	deleterious(0)	-	NULL
HUWE1	10075	genome.wustl.edu	37	X	53574656	53574656	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000427052	-1	known	p.D2572N	0.056	203	0%	367	36.8%	69	0%	-	-	-	NULL
HUWE1	10075	genome.wustl.edu	37	X	53585965	53585965	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031407.4	-1	reviewed	p.L2658I	1.000	119	0%	181	27.6%	30	0%	possibly_damaging(0.615)	deleterious(0)	deleterious(0.658)	NULL
HUWE1	10075	genome.wustl.edu	37	X	53611182	53611182	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031407.4	-1	reviewed	p.E1709*	1.000	570	0%	818	30.4%	12	0%	-	-	-	superfamily_ARM repeat
HUWE1	10075	genome.wustl.edu	37	X	53615346	53615346	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031407.4	-1	reviewed	p.F1537C	1.000	159	0%	180	32.2%	18	83.3%	benign(0.022)	tolerated(0.09)	neutral(0.297)	superfamily_ARM repeat
HUWE1	10075	genome.wustl.edu	37	X	53615460	53615460	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000427052	-1	known	p.C532*	1.000	176	0%	182	30.8%	13	92.3%	probably_damaging(0.979)	tolerated(0.22)	neutral(0.464)	superfamily_ARM repeat
HUWE1	10075	genome.wustl.edu	37	X	53618076	53618076	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031407.4	-1	reviewed	p.D1327Y	1.000	320	0%	390	27.9%	9	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_UBA,superfamily_UBA-like,HMMSmart_SM00165,superfamily_ARM repeat
HUWE1	10075	genome.wustl.edu	37	X	53674407	53674407	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031407.4	-1	reviewed	p.E85D	0.997	188	0%	216	27.8%	2	0%	benign(0)	tolerated(0.27)	neutral(0.034)	NULL
LOC100288560	100288560	genome.wustl.edu	37	X	53852694	53852694	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002344197.1	+1	model	p.E105*	0.977	153	0%	196	28.6%	6	0%	-	-	-	HMMPfam_Ribosomal_S18,superfamily_Ribosomal protein S18
PHF8	23133	genome.wustl.edu	37	X	53965596	53965596	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015107.2	-1	reviewed	p.L1024M	0.999	181	0%	318	35.8%	39	97.4%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	NULL
PHF8	23133	genome.wustl.edu	37	X	53966754	53966754	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015107.2	-1	reviewed	p.L949I	1.000	212	0%	416	24.8%	51	0%	probably_damaging(0.991)	tolerated(0.24)	deleterious(0.481)	NULL
PHF8	23133	genome.wustl.edu	37	X	54012332	54012332	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000375193	-1	known	p.L157S	1.000	351	0%	642	29.8%	35	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
PHF8	23133	genome.wustl.edu	37	X	54044223	54044223	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015107.2	-1	reviewed	p.N109H	1.000	82	0%	175	30.9%	10	0%	benign(0)	tolerated(0.12)	neutral(0.261)	superfamily_Clavaminate synthase-like
FAM120C	54954	genome.wustl.edu	37	X	54160249	54160249	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017848.4	-1	validated	p.R616Q	0.999	83	0%	167	33.5%	1	0%	benign(0.356)	tolerated(0.53)	neutral(0.120)	NULL
WNK3	65267	genome.wustl.edu	37	X	54264822	54264822	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020922.4	-1	reviewed	p.N1323H	0.005	171	0%	275	31.3%	2	0%	benign(0.313)	deleterious(0)	deleterious(0.542)	NULL
WNK3	65267	genome.wustl.edu	37	X	54278072	54278072	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020922.4	-1	reviewed	p.E806*	1.000	191	0%	245	32.7%	0	-	-	-	-	superfamily_Kinase_like
WNK3	65267	genome.wustl.edu	37	X	54321005	54321005	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020922.4	-1	reviewed	p.Q558	0.842	114	0%	158	33.5%	2	0%	-	-	-	superfamily_Kinase_like
WNK3	65267	genome.wustl.edu	37	X	54335576	54335576	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020922.4	-1	reviewed	p.L295I	1.000	153	0%	281	33.8%	0	-	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
WNK3	65267	genome.wustl.edu	37	X	54335691	54335691	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020922.4	-1	reviewed	p.Q256H	1.000	130	0%	221	37.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
WNK3	65267	genome.wustl.edu	37	X	54337627	54337627	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020922.4	-1	reviewed	p.S212Y	1.000	253	0%	364	30.2%	0	-	possibly_damaging(0.899)	tolerated(0.24)	neutral(0.393)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
FGD1	2245	genome.wustl.edu	37	X	54472809	54472809	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004463.2	-1	reviewed	p.F873	1.000	60	0%	74	31.1%	32	87.5%	-	-	-	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
FGD1	2245	genome.wustl.edu	37	X	54491944	54491944	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004463.2	-1	reviewed	p.L526I	1.000	60	0%	84	34.5%	18	0%	probably_damaging(0.999)	deleterious(0.04)	deleterious(0.839)	HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_DH-domain
FGD1	2245	genome.wustl.edu	37	X	54496662	54496662	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004463.2	-1	reviewed	p.E296D	1.000	98	0%	79	39.2%	20	0%	unknown(0)	tolerated(0.24)	-	NULL
FGD1	2245	genome.wustl.edu	37	X	54497869	54497869	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004463.2	-1	reviewed	p.G120V	1.000	172	0%	258	43.8%	9	77.7%	unknown(0)	deleterious(0)	-	NULL
ITIH6	347365	genome.wustl.edu	37	X	54777592	54777592	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198510.2	-1	reviewed	p.A1192T	0.036	115	0%	186	37.6%	1	100%	probably_damaging(0.98)	tolerated(0.35)	neutral(0.445)	HMMPfam_ITI_HC_C
ITIH6	347365	genome.wustl.edu	37	X	54780097	54780097	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198510.2	-1	reviewed	p.E1113	0.217	307	0%	395	26.8%	0	-	-	-	-	NULL
ITIH6	347365	genome.wustl.edu	37	X	54784919	54784919	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198510.2	-1	reviewed	p.L530I	0.055	37	0%	29	41.4%	0	-	possibly_damaging(0.827)	tolerated(0.27)	neutral(0.348)	NULL
ITIH6	347365	genome.wustl.edu	37	X	54823437	54823437	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198510.2	-1	reviewed	p.E65	0.039	143	0%	258	34.1%	0	-	-	-	-	HMMSmart_VIT,HMMPfam_VIT
MAGED2	10916	genome.wustl.edu	37	X	54837536	54837536	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014599.4	+1	reviewed	p.R274W	0.032	148	0%	191	28.3%	50	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
MAGED2	10916	genome.wustl.edu	37	X	54838030	54838030	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014599.4	+1	reviewed	p.E312*	1.000	98	0%	207	30.9%	40	7.5%	-	-	-	HMMPfam_MAGE
TRO	7216	genome.wustl.edu	37	X	54949730	54949730	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039705.1	+1	reviewed	p.K255N	0.828	94	0%	178	31.5%	1	0%	benign(0.004)	deleterious(0.04)	neutral(0.349)	NULL
TRO	7216	genome.wustl.edu	37	X	54951445	54951445	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001039705.1	+1	reviewed	p.E477*	1.000	173	0%	254	29.9%	1	0%	-	-	-	HMMPfam_MAGE
PFKFB1	5207	genome.wustl.edu	37	X	54978349	54978349	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002625.2	-1	reviewed	p.R279C	0.994	115	0%	195	31.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_PGAM,superfamily_SSF53254
MAGEH1	28986	genome.wustl.edu	37	X	55479290	55479290	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014061.3	+1	reviewed	p.F161L	0.807	144	0%	205	34.1%	45	51.1%	possibly_damaging(0.612)	tolerated(0.1)	deleterious(0.498)	HMMPfam_MAGE
UBQLN2	29978	genome.wustl.edu	37	X	56590436	56590436	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013444.3	+1	reviewed	p.E44*	1.000	25	0%	38	36.8%	6	0%	-	-	-	HMMPfam_ubiquitin,HMMSmart_SM00213,superfamily_Ubiquitin-like
UBQLN2	29978	genome.wustl.edu	37	X	56590893	56590893	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013444.3	+1	reviewed	p.S196L	1.000	87	0%	144	29.9%	14	0%	probably_damaging(0.959)	deleterious(0)	deleterious(0.847)	HMMSmart_SM00727
SPIN3	169981	genome.wustl.edu	37	X	57020624	57020624	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010862.2	-1	validated	p.D253N	1.000	146	0%	224	28.6%	2	100%	benign(0.021)	tolerated(0.21)	neutral(0.045)	HMMPfam_Spin-Ssty
SPIN3	169981	genome.wustl.edu	37	X	57021234	57021234	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010862.2	-1	validated	p.I49	0.999	180	0%	288	32.6%	9	0%	-	-	-	NULL
SPIN2B	474343	genome.wustl.edu	37	X	57146945	57146945	+	Nonsense_Mutation	SNP	G	G	A	rs4266782	byCluster	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006681.1	-1	validated	p.R40*	0.521	176	0%	274	36.5%	10	80%	-	-	-	NULL
FAAH2	158584	genome.wustl.edu	37	X	57367770	57367770	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_174912.3	+1	reviewed	p.S230I	1.000	333	0%	248	34.7%	7	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Amidase,superfamily_Amidase signature (AS) enzymes,PatternScan_AMIDASES
ZXDA	7789	genome.wustl.edu	37	X	57935742	57935742	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007156.4	-1	reviewed	p.T371	0.961	198	0%	240	38.3%	0	-	-	-	-	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
FAM123B	139285	genome.wustl.edu	37	X	63411550	63411550	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152424.3	-1	reviewed	p.F539L	1.000	97	0%	151	33.1%	0	-	probably_damaging(0.971)	tolerated(0.12)	deleterious(0.673)	HMMPfam_WTX
FAM123B	139285	genome.wustl.edu	37	X	63412711	63412711	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152424.3	-1	reviewed	p.E152D	0.060	76	0%	103	39.8%	0	-	possibly_damaging(0.891)	tolerated(0.17)	neutral(0.409)	HMMPfam_WTX
ASB12	142689	genome.wustl.edu	37	X	63444995	63444995	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_130388.2	-1	reviewed	p.A170D	0.998	140	0%	136	41.2%	0	-	possibly_damaging(0.937)	deleterious(0.02)	deleterious(0.766)	superfamily_ANK
MTMR8	55613	genome.wustl.edu	37	X	63556009	63556009	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017677.3	-1	reviewed	e10-1	1.000	206	0%	165	24.2%	0	-	-	-	-	-
ZC4H2	55906	genome.wustl.edu	37	X	64137684	64137684	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000447788	-1	known	p.R157Q	0.712	221	0%	354	29.4%	6	66.6%	unknown(0)	tolerated(0.36)	-	HMMPfam_zf-C4H2
ZC3H12B	340554	genome.wustl.edu	37	X	64708825	64708825	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010888.3	+1	reviewed	p.Q37H	0.027	86	0%	166	30.1%	0	-	benign(0.404)	deleterious(0.01)	deleterious(0.536)	NULL
ZC3H12B	340554	genome.wustl.edu	37	X	64717033	64717033	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010888.3	+1	reviewed	p.F199L	1.000	158	0%	151	26.5%	0	-	possibly_damaging(0.928)	deleterious(0.02)	deleterious(0.758)	NULL
ZC3H12B	340554	genome.wustl.edu	37	X	64718964	64718964	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001010888.3	+1	reviewed	p.C267	1.000	129	0%	210	35.7%	0	-	-	-	-	NULL
MSN	4478	genome.wustl.edu	37	X	64949523	64949523	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002444.2	+1	reviewed	p.K139T	1.000	96	0%	161	27.3%	16	0%	benign(0.003)	tolerated(0.22)	neutral(0.042)	HMMPfam_FERM_M,superfamily_FERM_3-hlx,HMMSmart_B41
LOC100129585	100129585	genome.wustl.edu	37	X	65176315	65176315	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001721365.2	-1	model	p.E28K	1.000	131	0%	166	28.9%	0	-	-	-	-	NULL
HEPH	9843	genome.wustl.edu	37	X	65393449	65393449	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138737.3	+1	reviewed	p.G147D	0.995	201	0%	167	32.9%	3	0%	probably_damaging(0.999)	deleterious(0.05)	deleterious(0.836)	superfamily_Cupredoxins
HEPH	9843	genome.wustl.edu	37	X	65414964	65414964	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138737.3	+1	reviewed	p.G468D	1.000	251	0%	232	34.9%	5	0%	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	superfamily_Cupredoxins,HMMPfam_Cu-oxidase_3
HEPH	9843	genome.wustl.edu	37	X	65418735	65418735	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138737.3	+1	reviewed	p.E580*	1.000	279	0%	395	29.9%	3	0%	-	-	-	superfamily_Cupredoxins
HEPH	9843	genome.wustl.edu	37	X	65476110	65476110	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138737.3	+1	reviewed	p.S948Y	0.000	267	0%	225	27.6%	17	0%	benign(0.133)	deleterious(0.03)	neutral(0.376)	superfamily_Cupredoxins
HEPH	9843	genome.wustl.edu	37	X	65478771	65478771	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138737.3	+1	reviewed	p.D999Y	1.000	101	0%	77	29.9%	15	0%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	superfamily_Cupredoxins,HMMPfam_Cu-oxidase_2
AR	367	genome.wustl.edu	37	X	66765654	66765654	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000044.2	+1	reviewed	p.K222N	1.000	102	0%	122	29.5%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	HMMPfam_Androgen_recep
OPHN1	4983	genome.wustl.edu	37	X	67339157	67339157	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002547.2	-1	reviewed	p.D432Y	1.000	107	0%	86	33.7%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_RhoGAP,HMMSmart_RhoGAP,superfamily_Rho_GAP
OPHN1	4983	genome.wustl.edu	37	X	67518844	67518844	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002547.2	-1	reviewed	p.I83	0.986	155	0%	207	29.5%	0	-	-	-	-	NULL
YIPF6	286451	genome.wustl.edu	37	X	67731786	67731786	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173834.2	+1	provisional	p.S51	0.955	238	0%	372	33.9%	16	0%	-	-	-	NULL
YIPF6	286451	genome.wustl.edu	37	X	67733197	67733197	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173834.2	+1	provisional	p.K72T	1.000	219	0%	384	34.9%	15	86.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Yip1
STARD8	9754	genome.wustl.edu	37	X	67938344	67938344	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142503.2	+1	reviewed	p.E530K	0.878	79	0%	109	33%	0	-	benign(0.087)	deleterious(0.02)	neutral(0.390)	NULL
EDA	1896	genome.wustl.edu	37	X	69247722	69247722	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001399.4	+1	reviewed	p.P181L	1.000	43	0%	40	17.5%	0	-	unknown(0)	tolerated(0.1)	-	HMMPfam_Collagen
AWAT2	158835	genome.wustl.edu	37	X	69263093	69263093	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001002254.1	-1	reviewed	p.G158E	0.997	96	0%	150	27.3%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_DAGAT
IGBP1	3476	genome.wustl.edu	37	X	69354500	69354500	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001551.2	+1	reviewed	p.R106*	1.000	140	0%	259	32%	60	0%	-	-	-	HMMPfam_TAP42
DGAT2L6	347516	genome.wustl.edu	37	X	69420292	69420292	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198512.1	+1	provisional	p.E152A	0.996	288	0%	423	28.6%	0	-	possibly_damaging(0.919)	deleterious(0.01)	deleterious(0.775)	HMMPfam_DAGAT
AWAT1	158833	genome.wustl.edu	37	X	69454574	69454574	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013579.2	+1	reviewed	p.F10S	0.140	131	0%	190	35.8%	0	-	benign(0.001)	deleterious(0)	neutral(0.445)	NULL
AWAT1	158833	genome.wustl.edu	37	X	69460101	69460101	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013579.2	+1	reviewed	p.H316	0.528	196	0%	273	28.9%	0	-	-	-	-	HMMPfam_DAGAT
KIF4A	24137	genome.wustl.edu	37	X	69550152	69550152	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012310.4	+1	reviewed	p.Q347H	1.000	162	0%	175	33.7%	8	0%	benign(0)	tolerated(0.49)	neutral(0.011)	superfamily_P-loop containing nucleoside triphosphate hydrolases
KIF4A	24137	genome.wustl.edu	37	X	69639577	69639577	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012310.4	+1	reviewed	p.E1147K	1.000	164	0%	258	34.1%	20	100%	benign(0.286)	tolerated(0.06)	neutral(0.410)	NULL
GDPD2	54857	genome.wustl.edu	37	X	69646233	69646233	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017711.3	+1	reviewed	p.L126F	0.002	190	0%	268	31.3%	0	-	benign(0)	tolerated(0.1)	neutral(0.286)	NULL
GDPD2	54857	genome.wustl.edu	37	X	69647034	69647034	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017711.3	+1	reviewed	p.C250	1.000	120	0%	196	36.2%	0	-	-	-	-	HMMPfam_GDPD,superfamily_PLC-like_Pdiesterase_TIM-brl
GDPD2	54857	genome.wustl.edu	37	X	69649445	69649445	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017711.3	+1	reviewed	p.A347T	0.000	139	0%	181	32%	0	-	benign(0)	tolerated(0.54)	neutral(0.007)	HMMPfam_GDPD,superfamily_PLC-like_Pdiesterase_TIM-brl
DLG3	1741	genome.wustl.edu	37	X	69699019	69699019	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021120.3	+1	reviewed	p.S475	0.774	173	0%	301	32.9%	14	100%	-	-	-	superfamily_PDZ domain-like
DLG3	1741	genome.wustl.edu	37	X	69715299	69715299	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021120.3	+1	reviewed	p.N605	1.000	346	0%	596	30.2%	0	-	-	-	-	superfamily_SH3-domain
DLG3	1741	genome.wustl.edu	37	X	69719067	69719067	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021120.3	+1	reviewed	p.D638Y	1.000	197	0%	245	25.7%	24	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SH3-domain,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
TEX11	56159	genome.wustl.edu	37	X	69826813	69826813	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003811.1	-1	reviewed	p.Y664C	0.951	143	0%	219	32%	0	-	probably_damaging(0.999)	deleterious(0.02)	deleterious(0.873)	NULL
TEX11	56159	genome.wustl.edu	37	X	69849512	69849512	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003811.1	-1	reviewed	p.E534	0.000	297	0%	353	34.6%	0	-	-	-	-	NULL
TEX11	56159	genome.wustl.edu	37	X	69871302	69871302	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003811.1	-1	reviewed	p.R509I	0.031	83	0%	68	25%	0	-	probably_damaging(0.992)	deleterious(0.03)	deleterious(0.812)	superfamily_TPR-like
TEX11	56159	genome.wustl.edu	37	X	69871346	69871346	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003811.1	-1	reviewed	p.Q494	0.178	98	1%	85	35.3%	0	-	-	-	-	superfamily_TPR-like
TEX11	56159	genome.wustl.edu	37	X	70073121	70073121	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001003811.1	-1	reviewed	p.E143*	0.977	148	0%	227	26%	0	-	-	-	-	superfamily_TPR-like
FOXO4	4303	genome.wustl.edu	37	X	70316418	70316418	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005938.3	+1	reviewed	p.A14T	0.999	49	0%	74	35.1%	16	0%	probably_damaging(0.996)	tolerated(0.1)	deleterious(0.748)	NULL
FOXO4	4303	genome.wustl.edu	37	X	70321052	70321052	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005938.3	+1	reviewed	p.L324	0.998	27	0%	62	38.7%	13	69.2%	-	-	-	NULL
CXorf65	158830	genome.wustl.edu	37	X	70324245	70324245	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001025265.2	-1	validated	p.R110H	0.227	80	0%	101	35.6%	2	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
IL2RG	3561	genome.wustl.edu	37	X	70329214	70329214	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000482750	-1	known	p.V12I	0.007	132	0%	233	26.6%	15	0%	-	-	-	superfamily_Fibronectin type III
IL2RG	3561	genome.wustl.edu	37	X	70330089	70330089	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000206.2	-1	reviewed	p.E171*	0.998	254	0%	433	29.3%	14	0%	-	-	-	HMMSmart_FN3,superfamily_FN_III-like
ZMYM3	9203	genome.wustl.edu	37	X	70473082	70473082	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005096.3	-1	reviewed	p.S8	0.998	90	0%	146	31.5%	6	0%	-	-	-	NULL
NONO	4841	genome.wustl.edu	37	X	70511778	70511778	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145408.1	+1	reviewed	p.E102K	1.000	176	0%	299	35.5%	140	85%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
TAF1	6872	genome.wustl.edu	37	X	70601698	70601698	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004606.3	+1	reviewed	p.A509V	1.000	237	0%	359	27.6%	4	0%	benign(0.103)	tolerated(0.1)	neutral(0.294)	NULL
TAF1	6872	genome.wustl.edu	37	X	70607173	70607173	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004606.3	+1	reviewed	p.F783L	1.000	361	0%	747	33.5%	5	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
TAF1	6872	genome.wustl.edu	37	X	70618466	70618466	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004606.3	+1	reviewed	p.R1242Q	1.000	198	0%	556	24.8%	12	75%	probably_damaging(0.995)	deleterious(0.03)	deleterious(0.822)	NULL
CXCR3	2833	genome.wustl.edu	37	X	70836483	70836483	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001504.1	-1	reviewed	p.L280P	0.994	30	0%	44	36.4%	6	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_7tm_1,superfamily_Family A G protein-coupled receptor-like
CXCR3	2833	genome.wustl.edu	37	X	70837169	70837169	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001504.1	-1	reviewed	p.F51	0.505	100	0%	156	37.8%	3	0%	-	-	-	superfamily_Family A G protein-coupled receptor-like
NHSL2	340527	genome.wustl.edu	37	X	71359483	71359483	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013627.2	+1	provisional	p.E329	0.899	80	0%	94	30.9%	0	-	-	-	-	NULL
NHSL2	340527	genome.wustl.edu	37	X	71359565	71359565	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013627.2	+1	provisional	p.T357A	1.000	70	0%	95	27.4%	0	-	possibly_damaging(0.942)	deleterious(0)	deleterious(0.832)	NULL
FLJ44635	392490	genome.wustl.edu	37	X	71379950	71379950	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_207422.2	+1	validated	p.E91*	1.000	138	0%	358	31%	0	-	-	-	-	HMMPfam_TCTP,superfamily_Mss4_like
ERCC6L	54821	genome.wustl.edu	37	X	71426262	71426262	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017669.2	-1	validated	p.E785D	0.004	222	0%	242	34.3%	2	0%	benign(0.009)	deleterious(0)	neutral(0.445)	NULL
CITED1	4435	genome.wustl.edu	37	X	71521767	71521767	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144885.1	-1	reviewed	p.A156T	0.032	68	0%	111	31.5%	2	0%	benign(0.003)	tolerated(0.47)	neutral(0.011)	HMMPfam_CITED
PHKA1	5255	genome.wustl.edu	37	X	71802311	71802311	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002637.3	-1	reviewed	p.I1145	0.664	141	0%	150	31.3%	13	0%	-	-	-	HMMPfam_PHK_AB
CDX4	1046	genome.wustl.edu	37	X	72673384	72673384	+	Silent	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005193.1	+1	provisional	p.V178	0.999	160	0%	187	30.5%	0	-	-	-	-	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like
CDX4	1046	genome.wustl.edu	37	X	72674223	72674223	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005193.1	+1	provisional	p.I219	1.000	227	0%	253	32%	0	-	-	-	-	HMMPfam_Homeobox,HMMSmart_SM00389,superfamily_Homeodomain-like,PatternScan_HOMEOBOX_1
BMP2KL	347359	genome.wustl.edu	37	X	73405851	73405851	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000373488	+1	known	p.E33K	1.000	23	0%	26	34.6%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
ZCCHC13	389874	genome.wustl.edu	37	X	73524122	73524122	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_203303.2	+1	reviewed	p.F7	0.997	76	0%	111	35.1%	0	-	-	-	-	HMMSmart_ZnF_C2HC
SLC16A2	6567	genome.wustl.edu	37	X	73749105	73749105	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006517.3	+1	reviewed	p.F484V	1.000	464	0%	583	35.5%	3	0%	possibly_damaging(0.868)	deleterious(0.01)	deleterious(0.743)	HMMPfam_MFS_1,superfamily_MFS_gen_substrate_transporter
RLIM	51132	genome.wustl.edu	37	X	73812730	73812730	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016120.3	-1	reviewed	p.E140D	1.000	297	0%	423	32.9%	4	75%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
KIAA2022	340533	genome.wustl.edu	37	X	73960088	73960088	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008537.2	-1	validated	p.S1435I	1.000	334	0%	342	33.9%	0	-	possibly_damaging(0.528)	deleterious(0.01)	deleterious(0.584)	NULL
KIAA2022	340533	genome.wustl.edu	37	X	73963779	73963779	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008537.2	-1	validated	p.L205	0.990	169	0%	239	33.5%	0	-	-	-	-	NULL
KIAA2022	340533	genome.wustl.edu	37	X	73964241	73964241	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008537.2	-1	validated	p.P51S	0.603	204	0%	152	37.5%	0	-	possibly_damaging(0.818)	deleterious(0)	deleterious(0.754)	NULL
KIAA2022	340533	genome.wustl.edu	37	X	73965415	73965415	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001008537.2	-1	validated	p.K24T	1.000	314	0%	282	29.8%	0	-	possibly_damaging(0.671)	deleterious(0)	deleterious(0.682)	NULL
ABCB7	22	genome.wustl.edu	37	X	74273408	74273408	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004299.3	-1	reviewed	p.E687K	1.000	201	0%	239	23.4%	28	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	superfamily_SSF52540
ZDHHC15	158866	genome.wustl.edu	37	X	74670651	74670651	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144969.2	-1	reviewed	p.R122I	1.000	245	0%	189	26.5%	0	-	probably_damaging(0.974)	deleterious(0.03)	deleterious(0.780)	HMMPfam_zf-DHHC
MAGEE2	139599	genome.wustl.edu	37	X	75003798	75003798	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138703.4	-1	validated	p.F363L	0.991	91	0%	181	29.3%	0	-	benign(0.425)	tolerated(0.1)	neutral(0.424)	HMMPfam_MAGE
MAGEE1	57692	genome.wustl.edu	37	X	75649146	75649146	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020932.2	+1	reviewed	p.A275T	0.000	18	0%	18	22.2%	0	-	benign(0.017)	tolerated(0.05)	neutral(0.346)	NULL
ATRX	546	genome.wustl.edu	37	X	76778764	76778764	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000489.3	-1	reviewed	p.K2272R	1.000	287	0%	351	33.6%	10	0%	probably_damaging(0.994)	tolerated(0.09)	deleterious(0.748)	NULL
ATRX	546	genome.wustl.edu	37	X	76874295	76874295	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000400866	-1	known	p.R98K	1.000	155	0%	129	28.7%	5	0%	-	-	-	HMMPfam_SNF2_N
ATRX	546	genome.wustl.edu	37	X	76891466	76891466	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000489.3	-1	reviewed	p.E1547*	1.000	234	0%	312	35.9%	7	0%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
ATRX	546	genome.wustl.edu	37	X	76937611	76937611	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000489.3	-1	reviewed	p.S1046I	0.963	100	0%	79	22.8%	3	33.3%	benign(0.116)	deleterious(0.01)	neutral(0.415)	NULL
ATRX	546	genome.wustl.edu	37	X	76938189	76938189	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000489.3	-1	reviewed	p.E853D	0.998	249	0%	325	28.3%	1	0%	probably_damaging(0.988)	tolerated(0.09)	deleterious(0.734)	NULL
PGAM4	441531	genome.wustl.edu	37	X	77224951	77224951	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001029891.2	-1	reviewed	p.R62I	1.000	88	0%	134	35.8%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_PGAM,superfamily_SSF53254
ZCCHC5	203430	genome.wustl.edu	37	X	77913545	77913545	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152694.2	-1	reviewed	p.K125E	0.000	186	0%	133	27.8%	0	-	benign(0)	tolerated(0.1)	neutral(0.286)	NULL
ZCCHC5	203430	genome.wustl.edu	37	X	77913638	77913638	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152694.2	-1	reviewed	p.L94I	0.001	129	0%	87	23%	0	-	possibly_damaging(0.65)	deleterious(0.04)	deleterious(0.577)	NULL
LOC100288575	100288575	genome.wustl.edu	37	X	78216260	78216260	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343827.1	-1	model	p.K3E	0.998	198	0%	187	28.3%	1	0%	-	-	-	NULL
P2RY10	27334	genome.wustl.edu	37	X	78216982	78216982	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014499.2	+1	reviewed	p.S322Y	0.972	170	0%	164	28%	3	0%	possibly_damaging(0.56)	deleterious(0.03)	deleterious(0.555)	superfamily_SSF81321
GPR174	84636	genome.wustl.edu	37	X	78427131	78427131	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032553.1	+1	validated	p.V209	0.012	176	0%	143	36.4%	1	0%	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
GPR174	84636	genome.wustl.edu	37	X	78427266	78427266	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032553.1	+1	validated	p.F254	0.961	252	0%	200	27.5%	1	0%	-	-	-	HMMPfam_7tm_1,superfamily_SSF81321
TBX22	50945	genome.wustl.edu	37	X	79286169	79286169	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001109878.1	+1	reviewed	p.K374N	0.995	394	0%	265	30.6%	0	-	possibly_damaging(0.946)	tolerated(0.41)	neutral(0.405)	NULL
FAM46D	169966	genome.wustl.edu	37	X	79698321	79698321	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152630.4	+1	validated	p.E95K	0.983	168	0%	98	34.7%	0	-	benign(0.167)	tolerated(0.51)	neutral(0.024)	HMMPfam_DUF1693
BRWD3	254065	genome.wustl.edu	37	X	79947594	79947594	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153252.4	-1	reviewed	p.E1107*	1.000	176	0%	147	34%	5	0%	-	-	-	NULL
BRWD3	254065	genome.wustl.edu	37	X	79965030	79965030	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153252.4	-1	reviewed	p.R791H	0.997	170	0%	266	35%	3	0%	probably_damaging(0.996)	deleterious(0.02)	deleterious(0.845)	NULL
BRWD3	254065	genome.wustl.edu	37	X	79990651	79990651	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153252.4	-1	reviewed	p.Q320H	1.000	143	0%	137	22.6%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase
BRWD3	254065	genome.wustl.edu	37	X	80001078	80001078	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153252.4	-1	reviewed	p.R194I	1.000	55	0%	47	29.8%	2	0%	probably_damaging(1)	tolerated(0.64)	deleterious(0.503)	HMMSmart_SM00320,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,HMMPfam_WD40
HMGN5	79366	genome.wustl.edu	37	X	80371810	80371810	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_030763.2	-1	reviewed	p.E54*	0.010	364	0%	454	33.7%	23	0%	-	-	-	HMMPfam_HMG14_17,HMMSmart_SM00527
SH3BGRL	6451	genome.wustl.edu	37	X	80532588	80532588	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003022.2	+1	validated	p.E51*	1.000	162	0%	172	30.2%	39	10.2%	-	-	-	HMMPfam_SH3BGR,superfamily_Thioredoxin-like
POU3F4	5456	genome.wustl.edu	37	X	82764318	82764318	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000307.3	+1	reviewed	p.R329Q	1.000	46	0%	42	38.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Homeobox,HMMSmart_HOX,superfamily_Homeodomain_like,PatternScan_HOMEOBOX_1
CYLC1	1538	genome.wustl.edu	37	X	83128835	83128835	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021118.1	+1	provisional	p.E373D	0.974	76	0%	91	37.4%	0	-	unknown(0)	tolerated(0.11)	-	NULL
CYLC1	1538	genome.wustl.edu	37	X	83129222	83129222	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021118.1	+1	provisional	p.K502N	0.000	181	0%	209	34%	0	-	unknown(0)	tolerated(0.21)	-	NULL
RPS6KA6	27330	genome.wustl.edu	37	X	83390130	83390130	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014496.4	-1	reviewed	p.R197I	1.000	127	0%	131	26.7%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ST,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase
APOOL	139322	genome.wustl.edu	37	X	84310908	84310908	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198450.4	+1	validated	p.A124V	0.263	237	0.4%	188	27.1%	2	0%	benign(0.003)	tolerated(0.83)	neutral(0.001)	HMMPfam_ApoO
ZNF711	7552	genome.wustl.edu	37	X	84510589	84510589	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021998.4	+1	reviewed	p.T135N	1.000	191	0%	316	32.9%	4	0%	benign(0.073)	tolerated(0.12)	neutral(0.266)	HMMPfam_Zfx_Zfy_act
CHM	1121	genome.wustl.edu	37	X	85156161	85156161	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000390.2	-1	reviewed	p.R426I	1.000	131	0%	108	25%	0	-	possibly_damaging(0.877)	deleterious(0)	deleterious(0.786)	HMMPfam_GDI,superfamily_SSF51905
MIR361	494323	genome.wustl.edu	37	X	85158697	85158697	+	RNA	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000362181	-1	known	NULL	1.000	70	0%	59	30.5%	0	-	-	-	-	-
CHM	1121	genome.wustl.edu	37	X	85211373	85211373	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000390.2	-1	reviewed	p.E317	0.000	110	0%	112	31.2%	1	0%	-	-	-	HMMPfam_GDI,superfamily_SSF51905
KLHL4	56062	genome.wustl.edu	37	X	86868989	86868989	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_057162.2	+1	reviewed	p.E178*	1.000	177	0%	139	32.4%	0	-	-	-	-	superfamily_POZ domain,HMMPfam_BTB
KLHL4	56062	genome.wustl.edu	37	X	86880687	86880687	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_057162.2	+1	reviewed	p.K405N	1.000	138	0%	119	37.8%	0	-	probably_damaging(1)	tolerated(0.27)	deleterious(0.533)	superfamily_Galactose oxidase central domain
CPXCR1	53336	genome.wustl.edu	37	X	88008938	88008938	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033048.5	+1	validated	p.R175*	0.063	81	0%	84	29.8%	0	-	-	-	-	NULL
PABPC5	140886	genome.wustl.edu	37	X	90691635	90691635	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080832.2	+1	reviewed	p.E353D	1.000	66	0%	108	35.2%	0	-	benign(0.093)	tolerated(0.08)	neutral(0.307)	HMMPfam_RRM_1,HMMSmart_SM00360,HMMSmart_SM00361,superfamily_RNA-binding domain RBD
NAP1L3	4675	genome.wustl.edu	37	X	92926978	92926978	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004538.4	-1	reviewed	p.F442L	1.000	168	0%	213	29.6%	0	-	benign(0.007)	deleterious(0)	neutral(0.445)	HMMPfam_NAP
FAM133A	286499	genome.wustl.edu	37	X	92964818	92964818	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173698.2	+1	validated	p.K134*	1.000	55	0%	38	47.4%	0	-	-	-	-	NULL
DIAPH2	1730	genome.wustl.edu	37	X	96013171	96013171	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006729.4	+1	reviewed	p.E121K	1.000	159	0%	215	36.3%	0	-	unknown(0)	deleterious(0.05)	-	HMMPfam_Drf_GBD
DIAPH2	1730	genome.wustl.edu	37	X	96171473	96171473	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006729.4	+1	reviewed	p.L257I	1.000	124	0%	97	25.8%	2	0%	unknown(0)	tolerated(1)	-	HMMPfam_Drf_GBD
DIAPH2	1730	genome.wustl.edu	37	X	96173584	96173584	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006729.4	+1	reviewed	p.G316C	1.000	229	0%	190	24.2%	3	0%	unknown(0)	tolerated(0.08)	-	HMMPfam_Drf_FH3
DIAPH2	1730	genome.wustl.edu	37	X	96369890	96369890	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006729.4	+1	reviewed	p.L839I	0.997	173	0%	227	31.7%	6	0%	probably_damaging(0.995)	deleterious(0.01)	deleterious(0.863)	HMMSmart_SM00498,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)
DIAPH2	1730	genome.wustl.edu	37	X	96502836	96502836	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006729.4	+1	reviewed	p.T948A	0.669	210	0%	328	32.3%	6	0%	possibly_damaging(0.546)	tolerated(0.51)	neutral(0.195)	HMMSmart_SM00498,HMMPfam_FH2,superfamily_Formin homology 2 domain (FH2 domain)
DIAPH2	1730	genome.wustl.edu	37	X	96854313	96854313	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006729.4	+1	reviewed	p.K1101N	0.997	150	0%	170	27.1%	2	0%	possibly_damaging(0.662)	deleterious(0.03)	deleterious(0.599)	NULL
PCDH19	57526	genome.wustl.edu	37	X	99661933	99661933	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105243.1	-1	reviewed	p.D555N	1.000	174	0%	327	35.5%	8	87.5%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_Cadherin
PCDH19	57526	genome.wustl.edu	37	X	99662678	99662678	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001105243.1	-1	reviewed	p.Y306*	0.885	99	0%	155	37.4%	5	0%	-	-	-	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin
SRPX2	27286	genome.wustl.edu	37	X	99917299	99917299	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014467.2	+1	reviewed	p.L97S	1.000	222	0%	228	34.2%	14	0%	probably_damaging(0.998)	deleterious(0.02)	deleterious(0.857)	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
SRPX2	27286	genome.wustl.edu	37	X	99917314	99917314	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014467.2	+1	reviewed	p.S102L	0.988	218	0%	202	28.2%	16	0%	possibly_damaging(0.803)	tolerated(0.2)	neutral(0.351)	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
SRPX2	27286	genome.wustl.edu	37	X	99919925	99919925	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014467.2	+1	reviewed	p.S170R	0.998	65	0%	40	10%	7	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
SRPX2	27286	genome.wustl.edu	37	X	99921796	99921796	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014467.2	+1	reviewed	p.T276I	1.000	74	0%	86	34.9%	7	0%	probably_damaging(0.991)	deleterious(0.01)	deleterious(0.850)	HMMPfam_Sushi,HMMSmart_CCP,superfamily_Complement_control_module
SYTL4	94121	genome.wustl.edu	37	X	99946198	99946198	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001129896.2	-1	reviewed	p.F183C	0.104	222	0%	241	29.9%	4	0%	benign(0.113)	tolerated(0.18)	neutral(0.065)	HMMPfam_RPH3A_effector
CSTF2	1478	genome.wustl.edu	37	X	100077364	100077364	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001325.2	+1	reviewed	p.R88*	1.000	142	0%	221	32.6%	6	83.3%	-	-	-	HMMPfam_RRM_1,HMMSmart_SM00360,superfamily_RNA-binding domain RBD
NOX1	27035	genome.wustl.edu	37	X	100105165	100105165	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007052.4	-1	reviewed	p.E370K	0.995	238	0%	245	30.6%	0	-	benign(0.005)	tolerated(0.45)	neutral(0.012)	HMMPfam_FAD_binding_8,superfamily_Riboflavin synthase domain-like
NOX1	27035	genome.wustl.edu	37	X	100117254	100117254	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007052.4	-1	reviewed	p.E237G	0.005	213	0%	236	35.6%	0	-	benign(0.245)	tolerated(0.31)	neutral(0.052)	NULL
NOX1	27035	genome.wustl.edu	37	X	100117443	100117443	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007052.4	-1	reviewed	p.V203	0.999	122	0%	151	33.1%	0	-	-	-	-	HMMPfam_Ferric_reduct
NOX1	27035	genome.wustl.edu	37	X	100125776	100125776	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007052.4	-1	reviewed	p.L25	0.998	251	0%	336	27.1%	0	-	-	-	-	NULL
ARL13A	392509	genome.wustl.edu	37	X	100242407	100242407	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012990.3	+1	validated	p.E172G	0.003	199	0%	285	30.5%	0	-	benign(0)	tolerated(0.42)	neutral(0.014)	HMMPfam_Arf,superfamily_SSF52540
ARL13A	392509	genome.wustl.edu	37	X	100243424	100243424	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001012990.3	+1	validated	p.E268*	0.762	133	0%	197	28.4%	0	-	-	-	-	NULL
TMEM35	59353	genome.wustl.edu	37	X	100349853	100349853	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021637.2	+1	validated	p.R138W	0.962	130	0%	244	29.5%	2	0%	possibly_damaging(0.938)	deleterious(0.01)	deleterious(0.789)	NULL
CENPI	2491	genome.wustl.edu	37	X	100381742	100381742	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006733.2	+1	reviewed	p.F244L	0.762	304	0%	534	33.1%	0	-	benign(0.001)	tolerated(1)	-	HMMPfam_Mis6
DRP2	1821	genome.wustl.edu	37	X	100496667	100496667	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001939.2	+1	reviewed	p.P190	0.053	64	0%	105	37.1%	0	-	-	-	-	HMMSmart_SPEC,superfamily_Spectrin
DRP2	1821	genome.wustl.edu	37	X	100513461	100513461	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001939.2	+1	reviewed	p.R852C	0.982	50	0%	65	38.5%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TAF7L	54457	genome.wustl.edu	37	X	100534008	100534008	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024885.3	-1	reviewed	p.E246*	0.000	143	0%	215	29.8%	0	-	-	-	-	HMMPfam_TAFII55_N
TIMM8A	1678	genome.wustl.edu	37	X	100603562	100603562	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004085.3	-1	reviewed	p.R31C	1.000	123	0%	188	35.1%	22	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-Tim10_DDP
HNRNPH2	3188	genome.wustl.edu	37	X	100668225	100668225	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001032393.1	+1	reviewed	p.S417G	1.000	214	0%	441	34.5%	123	0%	benign(0.073)	tolerated(0.18)	neutral(0.061)	NULL
ARMCX3	51566	genome.wustl.edu	37	X	100880885	100880885	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016607.3	+1	reviewed	p.L306M	0.994	56	0%	64	26.6%	31	70.9%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_DUF634,superfamily_ARM-type_fold
NXF5	55998	genome.wustl.edu	37	X	101096486	101096486	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032946.2	-1	reviewed	p.K95	0.195	426	0%	558	35.3%	0	-	-	-	-	NULL
ZMAT1	84460	genome.wustl.edu	37	X	101138568	101138568	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001011657.2	-1	reviewed	p.R611C	0.994	257	0%	345	35.7%	3	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ZMAT1	84460	genome.wustl.edu	37	X	101139630	101139630	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001011657.2	-1	reviewed	p.E257*	0.002	351	0.3%	257	31.5%	0	-	-	-	-	NULL
ZMAT1	84460	genome.wustl.edu	37	X	101152903	101152903	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001011657.2	-1	reviewed	p.K148T	0.836	151	0%	202	35.1%	2	100%	benign(0.049)	tolerated(0.45)	neutral(0.015)	HMMSmart_SM00451,HMMPfam_zf-U1,superfamily_C2H2 and C2HC zinc fingers
TCEAL2	140597	genome.wustl.edu	37	X	101381919	101381919	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080390.3	+1	reviewed	p.K39N	0.000	246	0%	549	35%	1	0%	probably_damaging(0.976)	tolerated(0.28)	neutral(0.450)	HMMPfam_TFA
TCEAL6	158931	genome.wustl.edu	37	X	101396012	101396012	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006938.2	-1	validated	p.E98K	0.521	387	0%	519	31.6%	0	-	probably_damaging(0.998)	tolerated(0.21)	deleterious(0.518)	HMMPfam_TFA
NXF2	56001	genome.wustl.edu	37	X	101572387	101572387	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017809.3	+1	reviewed	p.D95	0.000	414	0%	506	17.2%	0	-	-	-	-	NULL
NXF2B	728343	genome.wustl.edu	37	X	101622755	101622755	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099686.1	-1	provisional	p.L322	0.900	525	0%	819	15.8%	0	-	-	-	-	superfamily_SSF52058
GPRASP1	9737	genome.wustl.edu	37	X	101910789	101910789	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099410.1	+1	reviewed	p.E650*	0.301	113	0%	303	35.6%	5	0%	-	-	-	NULL
GPRASP1	9737	genome.wustl.edu	37	X	101911018	101911018	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099410.1	+1	reviewed	p.A726D	0.032	127	0%	229	29.7%	0	-	probably_damaging(1)	tolerated(0.09)	deleterious(0.796)	NULL
GPRASP2	114928	genome.wustl.edu	37	X	101970306	101970306	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001004051.2	+1	reviewed	p.S170F	0.003	71	0%	99	26.3%	2	0%	probably_damaging(0.99)	deleterious(0.03)	deleterious(0.806)	NULL
BHLHB9	80823	genome.wustl.edu	37	X	102004411	102004411	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142524.1	+1	validated	p.S163L	0.014	138	0%	201	35.3%	1	0%	benign(0.037)	tolerated(0.16)	neutral(0.061)	NULL
RAB40AL	282808	genome.wustl.edu	37	X	102192373	102192373	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001031834.1	+1	reviewed	p.Y43H	1.000	168	0%	211	32.7%	0	-	possibly_damaging(0.941)	tolerated(0.08)	deleterious(0.686)	HMMSmart_RAB,superfamily_SSF52540
BEX1	55859	genome.wustl.edu	37	X	102318106	102318106	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018476.3	-1	validated	p.P33S	0.242	161	0%	255	31%	250	0%	benign(0.002)	tolerated(0.42)	neutral(0.014)	HMMPfam_BEX
NXF3	56000	genome.wustl.edu	37	X	102334740	102334740	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022052.1	-1	reviewed	p.E371*	0.036	215	0%	256	33.2%	0	-	-	-	-	HMMPfam_NTF2,superfamily_NTF2-like
TCEAL7	56849	genome.wustl.edu	37	X	102586415	102586415	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_152278.2	+1	provisional	p.F28L	0.996	99	0%	191	48.7%	4	0%	benign(0.053)	tolerated(0.7)	neutral(0.005)	HMMPfam_TFA
TCEAL4	79921	genome.wustl.edu	37	X	102842178	102842178	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006935.1	+1	reviewed	p.P192H	0.001	132	0%	197	29.4%	233	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TCEAL1	9338	genome.wustl.edu	37	X	102884932	102884932	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006639.1	+1	reviewed	p.E30K	0.018	51	0%	39	33.3%	7	0%	benign(0)	tolerated(0.31)	neutral(0.027)	HMMPfam_TFA
TCEAL1	9338	genome.wustl.edu	37	X	102885150	102885150	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001006639.1	+1	reviewed	p.F102L	0.994	51	0%	150	32.7%	26	0%	possibly_damaging(0.465)	deleterious(0)	deleterious(0.598)	HMMPfam_TFA
MORF4L2	9643	genome.wustl.edu	37	X	102931325	102931325	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142418.1	-1	validated	p.L211I	0.996	152	0%	185	25.4%	311	0%	possibly_damaging(0.951)	tolerated(0.09)	deleterious(0.691)	HMMPfam_MRG
MORF4L2	9643	genome.wustl.edu	37	X	102931447	102931447	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142418.1	-1	validated	p.G170E	1.000	231	0%	304	27.3%	208	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MRG
ZCCHC18	644353	genome.wustl.edu	37	X	103358885	103358885	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143978.1	+1	provisional	p.S28Y	0.057	156	0%	234	33.3%	0	-	-	-	-	NULL
ESX1	80712	genome.wustl.edu	37	X	103499462	103499462	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153448.3	-1	reviewed	p.I23	0.000	100	0%	149	32.9%	0	-	-	-	-	NULL
TEX13A	56157	genome.wustl.edu	37	X	104464719	104464719	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000413579	-1	known	p.E121D	0.000	56	0%	68	36.8%	0	-	benign(0.389)	tolerated(0.07)	neutral(0.444)	NULL
IL1RAPL2	26280	genome.wustl.edu	37	X	105011226	105011226	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017416.1	+1	reviewed	p.N545H	1.000	92	0%	66	40.9%	0	-	possibly_damaging(0.487)	deleterious(0.01)	deleterious(0.568)	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain
IL1RAPL2	26280	genome.wustl.edu	37	X	105011244	105011244	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017416.1	+1	reviewed	p.H551Y	1.000	92	0%	72	26.4%	0	-	possibly_damaging(0.451)	tolerated(0.08)	neutral(0.448)	HMMPfam_TIR,HMMSmart_SM00255,superfamily_Toll/Interleukin receptor TIR domain
NRK	203447	genome.wustl.edu	37	X	105153831	105153831	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_198465.2	+1	validated	p.D733G	0.987	57	0%	59	35.6%	0	-	benign(0.019)	deleterious(0)	neutral(0.446)	superfamily_p53-like transcription factors
SERPINA7	6906	genome.wustl.edu	37	X	105280746	105280746	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000354.5	-1	reviewed	p.D102Y	0.975	157	0%	94	43.6%	0	-	benign(0.168)	deleterious(0)	neutral(0.460)	HMMPfam_Serpin,HMMSmart_SERPIN,superfamily_Prot_inh_serpin
MUM1L1	139221	genome.wustl.edu	37	X	105450377	105450377	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000337685	+1	known	p.E318K	0.013	33	0%	43	37.2%	3	0%	benign(0.001)	tolerated(0.84)	neutral(0.001)	NULL
MUM1L1	139221	genome.wustl.edu	37	X	105450473	105450473	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000337685	+1	known	p.E350*	0.454	39	0%	47	23.4%	3	0%	-	-	-	NULL
MUM1L1	139221	genome.wustl.edu	37	X	105450676	105450676	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000337685	+1	known	p.E417D	0.899	107	0%	128	21.9%	3	0%	probably_damaging(0.987)	tolerated(1)	neutral(0.436)	superfamily_SSF63748
CXorf57	55086	genome.wustl.edu	37	X	105855798	105855798	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018015.5	+1	validated	p.S163Y	0.004	61	0%	64	29.7%	0	-	probably_damaging(0.99)	deleterious(0.03)	deleterious(0.806)	NULL
CXorf57	55086	genome.wustl.edu	37	X	105876195	105876195	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018015.5	+1	validated	p.I374	0.988	240	0.4%	205	35.6%	0	-	-	-	-	NULL
CXorf57	55086	genome.wustl.edu	37	X	105876203	105876203	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018015.5	+1	validated	p.V377G	0.998	239	0%	196	29.6%	0	-	probably_damaging(0.995)	deleterious(0)	deleterious(0.902)	NULL
CXorf57	55086	genome.wustl.edu	37	X	105881035	105881035	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018015.5	+1	validated	p.F485C	0.999	129	0%	173	40.5%	0	-	benign(0.267)	deleterious(0.01)	neutral(0.434)	NULL
CXorf57	55086	genome.wustl.edu	37	X	105905268	105905268	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018015.5	+1	validated	p.L668M	0.000	151	0%	131	27.5%	0	-	benign(0.163)	tolerated(0.24)	neutral(0.052)	NULL
TBC1D8B	54885	genome.wustl.edu	37	X	106069274	106069274	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017752.2	+1	validated	p.R281I	0.991	180	0%	68	22.1%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
TBC1D8B	54885	genome.wustl.edu	37	X	106082590	106082590	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017752.2	+1	validated	p.S419Y	0.018	264	0%	248	36.3%	0	-	benign(0.108)	deleterious(0.04)	neutral(0.357)	NULL
TBC1D8B	54885	genome.wustl.edu	37	X	106096816	106096816	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017752.2	+1	validated	p.V730A	0.020	230	0%	350	28.3%	0	-	benign(0.069)	tolerated(0.67)	neutral(0.007)	superfamily_Ypt/Rab-GAP domain of gyp1p
TBC1D8B	54885	genome.wustl.edu	37	X	106116864	106116864	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017752.2	+1	validated	p.S1011*	0.427	259	0%	240	20.8%	0	-	-	-	-	NULL
MORC4	79710	genome.wustl.edu	37	X	106185792	106185792	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024657.4	-1	reviewed	p.E777*	0.957	276	0%	198	26.8%	4	25%	-	-	-	NULL
MORC4	79710	genome.wustl.edu	37	X	106198163	106198163	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024657.4	-1	reviewed	p.S555	0.038	234	0%	232	33.6%	5	40%	-	-	-	NULL
MORC4	79710	genome.wustl.edu	37	X	106201644	106201644	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024657.4	-1	reviewed	p.R436I	0.998	196	0%	171	31%	3	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_zf-CW
MID2	11043	genome.wustl.edu	37	X	107083938	107083938	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012216.3	+1	reviewed	p.G15R	1.000	118	0%	183	29.5%	0	-	unknown(0)	tolerated(0.13)	-	superfamily_RING/U-box
MID2	11043	genome.wustl.edu	37	X	107170005	107170005	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012216.3	+1	reviewed	p.R637K	1.000	191	0%	171	36.3%	2	100%	possibly_damaging(0.882)	tolerated(0.54)	neutral(0.352)	HMMPfam_SPRY,HMMSmart_SM00449
TEX13B	56156	genome.wustl.edu	37	X	107225250	107225250	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031273.2	-1	reviewed	p.F36	0.000	162	0%	195	29.7%	0	-	-	-	-	NULL
PSMD10	5716	genome.wustl.edu	37	X	107330977	107330977	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002814.2	-1	reviewed	p.H156N	1.000	342	0%	384	31.8%	36	72.2%	benign(0.002)	tolerated(0.22)	neutral(0.042)	HMMPfam_Ank,HMMSmart_ANK,superfamily_ANK
COL4A6	1288	genome.wustl.edu	37	X	107417803	107417803	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001847.2	-1	reviewed	p.A1003D	0.007	75	0%	59	35.6%	0	-	probably_damaging(0.982)	tolerated(0.5)	neutral(0.436)	HMMPfam_Collagen
COL4A6	1288	genome.wustl.edu	37	X	107422627	107422627	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001847.2	-1	reviewed	p.P726S	1.000	82	0%	98	38.8%	0	-	probably_damaging(1)	deleterious(0.03)	deleterious(0.865)	HMMPfam_Collagen
COL4A6	1288	genome.wustl.edu	37	X	107448921	107448921	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001847.2	-1	reviewed	p.P206H	0.992	88	0%	44	27.3%	0	-	unknown(0)	deleterious(0)	-	HMMPfam_Collagen
COL4A5	1287	genome.wustl.edu	37	X	107821341	107821341	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033380.1	+1	reviewed	p.G227C	1.000	188	0%	138	25.4%	2	0%	unknown(0)	deleterious(0.01)	-	NULL
IRS4	8471	genome.wustl.edu	37	X	107976897	107976897	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003604.2	-1	reviewed	p.S893Y	0.962	287	0%	383	33.4%	0	-	probably_damaging(0.99)	deleterious(0)	deleterious(0.886)	NULL
IRS4	8471	genome.wustl.edu	37	X	107977381	107977381	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003604.2	-1	reviewed	p.H732N	0.004	97	0%	141	36.9%	0	-	probably_damaging(0.99)	tolerated(0.28)	deleterious(0.473)	NULL
GUCY2F	2986	genome.wustl.edu	37	X	108635277	108635277	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001522.2	-1	reviewed	p.L882M	0.946	121	0%	105	35.2%	0	-	possibly_damaging(0.658)	deleterious(0.01)	deleterious(0.638)	HMMPfam_Guanylate_cyc,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain
GUCY2F	2986	genome.wustl.edu	37	X	108718936	108718936	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001522.2	-1	reviewed	p.R77Q	0.001	72	0%	67	32.8%	0	-	benign(0.001)	tolerated(0.37)	neutral(0.019)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
ACSL4	2182	genome.wustl.edu	37	X	108912397	108912397	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022977.2	-1	reviewed	p.I377	0.998	174	0%	195	25.1%	4	0%	-	-	-	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
ACSL4	2182	genome.wustl.edu	37	X	108921509	108921509	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022977.2	-1	reviewed	p.R305I	0.998	149	0%	191	31.4%	3	0%	probably_damaging(0.999)	tolerated(0.42)	deleterious(0.504)	HMMPfam_AMP-binding,superfamily_Acetyl-CoA synthetase-like
TMEM164	84187	genome.wustl.edu	37	X	109416526	109416526	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032227.3	+1	validated	p.F247L	1.000	115	0%	127	22.8%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
RGAG1	57529	genome.wustl.edu	37	X	109696277	109696277	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020769.2	+1	validated	p.R811I	0.554	103	0%	113	32.7%	0	-	probably_damaging(0.981)	deleterious(0.04)	deleterious(0.774)	NULL
RGAG1	57529	genome.wustl.edu	37	X	109697346	109697346	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020769.2	+1	validated	p.E1167	0.916	271	0%	438	30.1%	0	-	-	-	-	NULL
CHRDL1	91851	genome.wustl.edu	37	X	109922648	109922648	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001143981.1	-1	reviewed	p.L388F	1.000	218	0%	251	31.1%	1	0%	probably_damaging(0.998)	tolerated(0.35)	deleterious(0.495)	NULL
PAK3	5063	genome.wustl.edu	37	X	110385385	110385385	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128168.1	+1	reviewed	p.T79	0.999	363	0%	163	28.2%	0	-	-	-	-	HMMPfam_PBD,HMMSmart_PBD
PAK3	5063	genome.wustl.edu	37	X	110406149	110406149	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128168.1	+1	reviewed	p.K195E	1.000	221	0%	215	35.3%	0	-	benign(0.008)	tolerated(0.8)	neutral(0.001)	NULL
PAK3	5063	genome.wustl.edu	37	X	110406180	110406180	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128168.1	+1	reviewed	p.P205H	1.000	239	0%	259	32%	0	-	benign(0)	deleterious(0)	neutral(0.445)	NULL
PAK3	5063	genome.wustl.edu	37	X	110435374	110435374	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128168.1	+1	reviewed	p.T320A	1.000	230	0%	266	38.3%	0	-	possibly_damaging(0.483)	deleterious(0)	deleterious(0.605)	HMMSmart_S_TKc,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase
PAK3	5063	genome.wustl.edu	37	X	110439685	110439685	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001128168.1	+1	reviewed	p.F444L	1.000	237	0%	197	33.5%	0	-	possibly_damaging(0.946)	deleterious(0)	deleterious(0.835)	HMMSmart_S_TKc,superfamily_Kinase_like,HMMPfam_Pkinase
DCX	1641	genome.wustl.edu	37	X	110654140	110654140	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000358070	-1	known	p.R13K	0.673	262	0%	305	28.5%	0	-	-	-	-	NULL
ALG13	79868	genome.wustl.edu	37	X	111003136	111003136	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000394780	+1	known	p.S1108Y	0.006	276	0%	256	27%	7	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
LHFPL1	340596	genome.wustl.edu	37	X	111903918	111903918	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178175.3	-1	reviewed	p.L140V	0.994	238	0%	296	33.8%	0	-	benign(0.029)	tolerated(0.72)	neutral(0.003)	HMMPfam_L_HGMIC_fpl
LHFPL1	340596	genome.wustl.edu	37	X	111914423	111914423	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_178175.3	-1	reviewed	p.E66*	1.000	134	0%	161	36%	0	-	-	-	-	HMMPfam_L_HGMIC_fpl
AMOT	154796	genome.wustl.edu	37	X	112065588	112065588	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113490.1	-1	reviewed	p.P256L	1.000	270	0%	336	31.8%	0	-	benign(0.003)	tolerated(0.09)	neutral(0.296)	NULL
AMOT	154796	genome.wustl.edu	37	X	112066333	112066333	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001113490.1	-1	reviewed	p.P8S	0.935	178	0%	217	28.6%	2	0%	benign(0.019)	tolerated(0.3)	neutral(0.030)	NULL
HTR2C	3358	genome.wustl.edu	37	X	114141552	114141552	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000868.2	+1	reviewed	p.F317L	1.000	359	0%	354	33.9%	0	-	probably_damaging(1)	tolerated(0.13)	deleterious(0.752)	HMMPfam_7tm_1,superfamily_SSF81321
HTR2C	3358	genome.wustl.edu	37	X	114141695	114141695	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000868.2	+1	reviewed	p.P365H	1.000	340	0%	315	33%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_7tm_1,superfamily_SSF81321
LRCH2	57631	genome.wustl.edu	37	X	114400484	114400484	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020871.3	-1	validated	p.S373F	1.000	294	0%	315	30.5%	0	-	probably_damaging(1)	tolerated(0.7)	deleterious(0.502)	NULL
RBMXL3	139804	genome.wustl.edu	37	X	114426218	114426218	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145346.1	+1	validated	p.S738	0.724	79	0%	86	38.4%	0	-	-	-	-	NULL
RBMXL3	139804	genome.wustl.edu	37	X	114426528	114426528	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145346.1	+1	validated	p.R842C	0.025	39	0%	56	35.7%	0	-	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	NULL
LUZP4	51213	genome.wustl.edu	37	X	114540772	114540772	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000371921	+1	known	p.E76*	0.009	68	0%	102	28.4%	0	-	-	-	-	NULL
LUZP4	51213	genome.wustl.edu	37	X	114540933	114540933	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016383.3	+1	validated	p.S169Y	0.001	173	0%	246	40.7%	0	-	possibly_damaging(0.952)	deleterious(0.01)	deleterious(0.801)	NULL
LUZP4	51213	genome.wustl.edu	37	X	114541003	114541003	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016383.3	+1	validated	p.G192	0.000	171	0%	209	33.5%	0	-	-	-	-	NULL
PLS3	5358	genome.wustl.edu	37	X	114863533	114863533	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136025.3	+1	reviewed	p.S87	0.997	172	0%	259	35.9%	7	0%	-	-	-	superfamily_EF-hand
LOC642357	642357	genome.wustl.edu	37	X	114937281	114937281	+	RNA	SNP	C	C	T	rs184731711	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XR_016681.3	+1	model	NULL	0.004	32	0%	82	22%	0	-	-	-	-	-
SLC6A14	11254	genome.wustl.edu	37	X	115573861	115573861	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007231.3	+1	reviewed	p.G118V	1.000	257	0%	198	28.8%	2	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SNF
KLHL13	90293	genome.wustl.edu	37	X	117044002	117044002	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033495.3	-1	reviewed	p.E210K	1.000	71	0%	48	29.2%	6	0%	benign(0.041)	tolerated(0.4)	neutral(0.018)	HMMPfam_BACK
KLHL13	90293	genome.wustl.edu	37	X	117053614	117053614	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_033495.3	-1	reviewed	p.K147T	1.000	152	0%	154	33.8%	2	50%	benign(0.016)	tolerated(0.27)	neutral(0.034)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
MIR1277	100302214	genome.wustl.edu	37	X	117520365	117520366	+	RNA	INS	-	-	AT	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000408536	+1	known	NULL	1.000:0.986	-	-	-	-	-	-	-	-	-	-
WDR44	54521	genome.wustl.edu	37	X	117526698	117526698	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019045.4	+1	reviewed	p.P97H	0.215	107	0%	135	17%	1	0%	benign(0)	tolerated(0.14)	neutral(0.249)	NULL
WDR44	54521	genome.wustl.edu	37	X	117526873	117526873	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000371848	+1	known	p.E55K	0.000	113	0%	185	30.3%	1	100%	-	-	-	NULL
WDR44	54521	genome.wustl.edu	37	X	117532380	117532380	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000371848	+1	known	p.E307*	0.854	134	0%	183	30.1%	6	0%	benign(0.008)	tolerated(0.39)	neutral(0.016)	superfamily_WD40 repeat-like
DOCK11	139818	genome.wustl.edu	37	X	117676694	117676694	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144658.3	+1	validated	p.A37T	1.000	194	0%	261	19.2%	0	-	benign(0)	tolerated(0.07)	neutral(0.319)	NULL
DOCK11	139818	genome.wustl.edu	37	X	117695438	117695438	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144658.3	+1	validated	p.S217	1.000	188	0%	264	34.1%	0	-	-	-	-	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
DOCK11	139818	genome.wustl.edu	37	X	117706314	117706314	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144658.3	+1	validated	p.D355G	1.000	156	0%	171	24.6%	1	0%	benign(0.413)	tolerated(0.27)	neutral(0.167)	NULL
DOCK11	139818	genome.wustl.edu	37	X	117727301	117727301	+	Splice_Site	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144658.3	+1	validated	e20+1	1.000	125	0%	124	25.8%	0	-	-	-	-	-
DOCK11	139818	genome.wustl.edu	37	X	117770374	117770374	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144658.3	+1	validated	p.E1318*	1.000	232	0%	218	26.1%	1	0%	-	-	-	NULL
DOCK11	139818	genome.wustl.edu	37	X	117815110	117815110	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144658.3	+1	validated	p.E1921*	1.000	72	0%	96	37.5%	5	20%	-	-	-	HMMPfam_Ded_cyto
DOCK11	139818	genome.wustl.edu	37	X	117815747	117815747	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144658.3	+1	validated	p.D1985Y	1.000	266	0%	347	25.6%	5	0%	benign(0.03)	deleterious(0)	neutral(0.446)	HMMPfam_Ded_cyto
IL13RA1	3597	genome.wustl.edu	37	X	117895241	117895241	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001560.2	+1	reviewed	p.N273D	0.000	199	0%	230	32.2%	20	100%	benign(0)	tolerated(0.65)	neutral(0.003)	superfamily_Fibronectin type III
KIAA1210	57481	genome.wustl.edu	37	X	118221431	118221431	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020721.1	-1	validated	p.K1254N	0.004	73	0%	92	32.6%	0	-	probably_damaging(0.998)	tolerated(0.06)	deleterious(0.797)	NULL
KIAA1210	57481	genome.wustl.edu	37	X	118222389	118222389	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020721.1	-1	validated	p.S935F	0.000	155	0%	182	33.5%	0	-	possibly_damaging(0.951)	-	-	NULL
KIAA1210	57481	genome.wustl.edu	37	X	118222608	118222608	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020721.1	-1	validated	p.T862I	0.000	130	0%	95	34.7%	0	-	benign(0.24)	deleterious(0.03)	neutral(0.389)	NULL
KIAA1210	57481	genome.wustl.edu	37	X	118223457	118223457	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020721.1	-1	validated	p.A579D	0.001	306	0.3%	477	38.6%	0	-	probably_damaging(0.996)	-	-	NULL
CXorf56	63932	genome.wustl.edu	37	X	118694273	118694273	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_022101.3	-1	validated	p.K67T	1.000	228	0%	419	28.6%	17	0%	possibly_damaging(0.855)	deleterious(0)	deleterious(0.774)	NULL
NKRF	55922	genome.wustl.edu	37	X	118723981	118723981	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017544.3	-1	reviewed	p.V469	1.000	129	0%	188	34%	7	0%	-	-	-	HMMSmart_SM00358,superfamily_dsRNA-binding domain-like
NKRF	55922	genome.wustl.edu	37	X	118725227	118725227	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017544.3	-1	reviewed	p.R54I	1.000	117	0%	186	31.7%	3	0%	probably_damaging(0.986)	deleterious(0)	deleterious(0.879)	NULL
SEPT6	23157	genome.wustl.edu	37	X	118797493	118797493	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_015129.5	-1	reviewed	p.T98M	1.000	166	0%	322	34.2%	13	84.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Septin,superfamily_P-loop containing nucleoside triphosphate hydrolases
RPL39	6170	genome.wustl.edu	37	X	118923917	118923917	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001000.2	-1	reviewed	p.R21C	1.000	142	0%	253	37.2%	1859	0.1%	benign(0.042)	tolerated(0.05)	neutral(0.348)	HMMPfam_Ribosomal_L39,superfamily_Ribosomal protein L39e
UPF3B	65109	genome.wustl.edu	37	X	118971830	118971830	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080632.1	-1	reviewed	p.D398Y	1.000	346	0%	585	31.8%	9	0%	possibly_damaging(0.795)	deleterious(0.03)	deleterious(0.663)	NULL
UPF3B	65109	genome.wustl.edu	37	X	118985491	118985491	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_080632.1	-1	reviewed	p.R113C	1.000	145	0%	255	24.3%	7	0%	benign(0.309)	deleterious(0)	deleterious(0.541)	HMMPfam_Smg4_UPF3,superfamily_RNA-binding domain RBD
NKAP	79576	genome.wustl.edu	37	X	119070272	119070272	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024528.3	-1	reviewed	p.T221A	0.117	262	0%	484	20.5%	18	0%	unknown(0)	tolerated(0.33)	-	NULL
ZBTB33	10009	genome.wustl.edu	37	X	119387283	119387283	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006777.3	+1	reviewed	p.K5Q	1.000	93	0%	98	36.7%	10	0%	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	superfamily_POZ domain
ZBTB33	10009	genome.wustl.edu	37	X	119387605	119387605	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006777.3	+1	reviewed	p.F112Y	1.000	103	0%	119	37.8%	0	-	probably_damaging(0.996)	deleterious(0)	deleterious(0.906)	HMMSmart_SM00225,superfamily_POZ domain,HMMPfam_BTB
ATP1B4	23439	genome.wustl.edu	37	X	119509329	119509329	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142447.2	+1	reviewed	p.F222C	1.000	205	0%	258	31%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Na_K-ATPase,PatternScan_ATPASE_NA_K_BETA_2
LAMP2	3920	genome.wustl.edu	37	X	119581876	119581876	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122606.1	-1	reviewed	p.F187L	0.000	214	0%	384	29.7%	91	0%	benign(0.051)	tolerated(0.44)	neutral(0.015)	HMMPfam_Lamp
LAMP2	3920	genome.wustl.edu	37	X	119589309	119589309	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001122606.1	-1	reviewed	p.A100	0.728	259	0%	345	33%	76	89.4%	-	-	-	NULL
CUL4B	8450	genome.wustl.edu	37	X	119674363	119674363	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003588.3	-1	reviewed	p.E518*	1.000	205	0%	208	34.1%	2	0%	-	-	-	HMMPfam_Cullin,superfamily_Cullin repeat
CUL4B	8450	genome.wustl.edu	37	X	119678368	119678368	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003588.3	-1	reviewed	p.R369*	0.984	149	0%	198	27.8%	3	0%	-	-	-	HMMPfam_Cullin,superfamily_Cullin repeat
CUL4B	8450	genome.wustl.edu	37	X	119694089	119694089	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003588.3	-1	reviewed	p.Q153H	1.000	109	0%	161	31.7%	1	0%	benign(0)	tolerated(0.23)	neutral(0.042)	NULL
CT47B1	643311	genome.wustl.edu	37	X	120008784	120008784	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145718.1	-1	validated	p.E247D	0.001	291	0%	250	32.4%	0	-	unknown(0)	tolerated(0.17)	-	NULL
CT47B1	643311	genome.wustl.edu	37	X	120008813	120008813	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001145718.1	-1	validated	p.E238*	0.001	317	0%	264	25.8%	0	-	-	-	-	NULL
GLUD2	2747	genome.wustl.edu	37	X	120182035	120182035	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012084.3	+1	reviewed	p.S166Y	0.998	106	0%	121	32.2%	11	0%	benign(0.197)	deleterious(0)	neutral(0.463)	HMMPfam_ELFV_dehydrog_N,superfamily_SSF53223
GLUD2	2747	genome.wustl.edu	37	X	120182121	120182121	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012084.3	+1	reviewed	p.E195K	0.986	101	0%	171	40.4%	0	-	benign(0)	tolerated(0.63)	neutral(0.004)	HMMPfam_ELFV_dehydrog_N,superfamily_SSF53223
GRIA3	2892	genome.wustl.edu	37	X	122319772	122319772	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000264357	+1	known	p.E66D	1.000	306	0%	399	40.1%	1	100%	possibly_damaging(0.82)	tolerated(0.19)	neutral(0.360)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
GRIA3	2892	genome.wustl.edu	37	X	122387342	122387342	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000264357	+1	known	p.L153M	0.998	149	0%	119	39.5%	0	-	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMPfam_ANF_receptor,superfamily_Periplasmic binding protein-like I
THOC2	57187	genome.wustl.edu	37	X	122753330	122753330	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000441692	-1	known	p.R206I	1.000	163	0%	136	40.4%	7	0%	unknown(0)	tolerated(0.1)	-	NULL
THOC2	57187	genome.wustl.edu	37	X	122755356	122755356	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001081550.1	-1	validated	p.P1290S	1.000	371	0%	356	29.5%	11	0%	possibly_damaging(0.89)	tolerated(0.26)	neutral(0.384)	NULL
THOC2	57187	genome.wustl.edu	37	X	122802018	122802018	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001081550.1	-1	validated	p.V337L	1.000	353	0%	410	30.7%	2	100%	benign(0.004)	tolerated(0.64)	neutral(0.003)	NULL
XIAP	331	genome.wustl.edu	37	X	123019598	123019598	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001167.2	+1	reviewed	p.R29I	1.000	54	0%	94	25.5%	2	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_BIR,HMMSmart_BIR,PatternScan_BIR_REPEAT_1,superfamily_SSF57924
XIAP	331	genome.wustl.edu	37	X	123020215	123020215	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001167.2	+1	reviewed	p.L235I	0.960	221	0%	408	32.1%	1	0%	benign(0)	tolerated(0.44)	neutral(0.013)	superfamily_SSF57924
XIAP	331	genome.wustl.edu	37	X	123040882	123040882	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001167.2	+1	reviewed	p.L449F	1.000	136	0%	208	27.4%	2	0%	probably_damaging(0.992)	tolerated(0.17)	deleterious(0.506)	superfamily_SSF57924
STAG2	10735	genome.wustl.edu	37	X	123159735	123159735	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042749.1	+1	validated	p.I30	0.999	193	0%	236	32.6%	5	80%	-	-	-	NULL
STAG2	10735	genome.wustl.edu	37	X	123164904	123164904	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042749.1	+1	validated	p.H73Y	1.000	254	0%	502	29.9%	15	0%	benign(0.424)	tolerated(0.06)	neutral(0.460)	NULL
STAG2	10735	genome.wustl.edu	37	X	123176489	123176489	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042749.1	+1	validated	p.F152	1.000	145	0%	221	28.1%	8	87.5%	-	-	-	NULL
STAG2	10735	genome.wustl.edu	37	X	123181245	123181245	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042749.1	+1	validated	p.L237I	1.000	130	0%	205	26.8%	9	0%	possibly_damaging(0.922)	deleterious(0.02)	deleterious(0.754)	HMMPfam_STAG,superfamily_ARM-type_fold
STAG2	10735	genome.wustl.edu	37	X	123189994	123189994	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001042749.1	+1	validated	p.L405I	1.000	194	0%	228	31.6%	3	0%	probably_damaging(0.989)	deleterious(0)	deleterious(0.884)	superfamily_ARM-type_fold
ODZ1	10178	genome.wustl.edu	37	X	123514421	123514421	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014253.3	-1	reviewed	p.H2715N	1.000	274	0%	269	25.7%	0	-	probably_damaging(0.956)	tolerated(0.15)	deleterious(0.641)	NULL
ODZ1	10178	genome.wustl.edu	37	X	123517812	123517812	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014253.3	-1	reviewed	p.A2316	0.999	128	0%	152	29.6%	0	-	-	-	-	NULL
ODZ1	10178	genome.wustl.edu	37	X	123518430	123518430	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014253.3	-1	reviewed	p.E2110D	1.000	389	0%	416	31%	0	-	probably_damaging(0.995)	tolerated(0.09)	deleterious(0.754)	NULL
ODZ1	10178	genome.wustl.edu	37	X	123554583	123554583	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014253.3	-1	reviewed	p.L1513	0.935	138	0%	188	31.4%	0	-	-	-	-	HMMPfam_NHL,superfamily_N2O_reductase_N,superfamily_SSF101898
ODZ1	10178	genome.wustl.edu	37	X	123695572	123695572	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014253.3	-1	reviewed	p.C795R	1.000	381	0%	388	31.2%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196
ODZ1	10178	genome.wustl.edu	37	X	123838974	123838974	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014253.3	-1	reviewed	p.R302	0.949	164	0%	206	37.9%	0	-	-	-	-	HMMPfam_Ten_N
ODZ1	10178	genome.wustl.edu	37	X	123839096	123839096	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014253.3	-1	reviewed	p.F261S	1.000	108	0%	129	33.3%	0	-	benign(0.047)	deleterious(0)	neutral(0.448)	HMMPfam_Ten_N
ACTRT1	139741	genome.wustl.edu	37	X	127185114	127185114	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138289.3	-1	reviewed	p.V358I	1.000	186	0%	221	30.8%	0	-	benign(0.007)	tolerated(1)	-	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067
SMARCA1	6594	genome.wustl.edu	37	X	128602858	128602858	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003069.3	-1	reviewed	p.D864N	1.000	274	0%	312	21.5%	39	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	HMMSmart_SM00717,superfamily_Homeodomain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases
OCRL	4952	genome.wustl.edu	37	X	128694583	128694583	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000276.3	+1	reviewed	p.P260H	1.000	214	0%	242	26%	9	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMSmart_SM00128,HMMPfam_Exo_endo_phos,superfamily_DNase I-like
OCRL	4952	genome.wustl.edu	37	X	128723899	128723899	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000276.3	+1	reviewed	p.F849L	1.000	179	0%	213	34.7%	9	0%	benign(0.019)	tolerated(0.25)	neutral(0.038)	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
OCRL	4952	genome.wustl.edu	37	X	128724235	128724235	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000276.3	+1	reviewed	p.S898	0.075	336	0%	319	31%	10	0%	-	-	-	NULL
SASH3	54440	genome.wustl.edu	37	X	128926581	128926581	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000443760	+1	known	p.F240L	0.000	150	0%	210	35.2%	0	-	unknown(0)	tolerated(0.23)	-	NULL
ZDHHC9	51114	genome.wustl.edu	37	X	128975763	128975763	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000433917	-1	known	p.S13L	0.857	122	0%	231	31.6%	35	0%	-	-	-	NULL
BCORL1	63035	genome.wustl.edu	37	X	129146999	129146999	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_021946.3	+1	reviewed	p.L84R	1.000	14	0%	14	35.7%	1	0%	unknown(0)	deleterious(0)	-	NULL
BCORL1	63035	genome.wustl.edu	37	X	129148827	129148827	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000441294	+1	known	p.R129C	0.451	72	0%	163	36.2%	4	100%	-	-	-	NULL
BCORL1	63035	genome.wustl.edu	37	X	129156885	129156885	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000441294	+1	known	p.E643*	1.000	232	0%	360	35%	3	66.6%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
AIFM1	9131	genome.wustl.edu	37	X	129279545	129279545	+	Splice_Site	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004208.3	-1	reviewed	e6-1	1.000	178	0%	377	26%	0	-	-	-	-	-
AIFM1	9131	genome.wustl.edu	37	X	129281790	129281790	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004208.3	-1	reviewed	p.I137M	0.009	135	0%	213	28.6%	28	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Pyr_redox_2,superfamily_FAD/NAD(P)-binding domain
SLC25A14	9016	genome.wustl.edu	37	X	129492617	129492617	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003951.2	+1	reviewed	p.R168*	1.000	235	0%	240	29.2%	7	0%	-	-	-	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr
ENOX2	10495	genome.wustl.edu	37	X	129804065	129804065	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182314.1	-1	reviewed	p.R219C	1.000	297	0%	367	32.4%	1	100%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ARHGAP36	158763	genome.wustl.edu	37	X	130219664	130219664	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_144967.3	+1	validated	p.K353T	0.799	264	0%	310	32.9%	0	-	benign(0)	tolerated(0.6)	neutral(0.004)	HMMPfam_RhoGAP,HMMSmart_SM00324,superfamily_GTPase activation domain GAP
IGSF1	3547	genome.wustl.edu	37	X	130411008	130411008	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001555.4	-1	reviewed	p.S838L	0.257	182	0%	215	33%	0	-	probably_damaging(0.983)	tolerated(0.18)	deleterious(0.485)	HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_ig,superfamily_Immunoglobulin
IGSF1	3547	genome.wustl.edu	37	X	130411833	130411833	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001555.4	-1	reviewed	p.K773Q	1.000	273	0%	335	33.4%	0	-	probably_damaging(0.969)	tolerated(0.42)	neutral(0.425)	HMMSmart_SM00409,superfamily_Immunoglobulin
MST4	51765	genome.wustl.edu	37	X	131206349	131206349	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_016542.3	+1	reviewed	p.V329A	1.000	214	0%	212	30.2%	6	0%	probably_damaging(0.992)	deleterious(0)	deleterious(0.892)	NULL
FRMD7	90167	genome.wustl.edu	37	X	131212742	131212742	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_194277.2	-1	reviewed	p.D435Y	1.000	257	0%	256	28.9%	0	-	possibly_damaging(0.688)	deleterious(0)	deleterious(0.691)	NULL
MBNL3	55796	genome.wustl.edu	37	X	131524945	131524945	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018388.3	-1	reviewed	p.P234H	1.000	142	0%	91	30.8%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_zf-CCCH,HMMSmart_SM00356,superfamily_CCCH zinc finger
USP26	83844	genome.wustl.edu	37	X	132160874	132160874	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031907.1	-1	reviewed	p.E459K	0.068	73	0%	61	27.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_UCH,superfamily_Cysteine proteinases
USP26	83844	genome.wustl.edu	37	X	132162147	132162147	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_031907.1	-1	reviewed	p.K34	0.000	153	0%	97	35.1%	0	-	-	-	-	NULL
GPC4	2239	genome.wustl.edu	37	X	132458392	132458392	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001448.2	-1	reviewed	p.F164L	1.000	93	0%	108	23.1%	19	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	HMMPfam_Glypican
GPC3	2719	genome.wustl.edu	37	X	133087203	133087203	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004484.3	-1	reviewed	p.T71A	1.000	384	0%	395	29.1%	4	0%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	HMMPfam_Glypican
CCDC160	347475	genome.wustl.edu	37	X	133379481	133379481	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001101357.1	+1	provisional	p.V217	0.021	75	0%	86	22.1%	1	0%	-	-	-	NULL
CCDC160	347475	genome.wustl.edu	37	X	133379759	133379759	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001101357.1	+1	provisional	p.M310R	0.000	60	0%	48	39.6%	2	0%	possibly_damaging(0.47)	tolerated(0.28)	neutral(0.186)	NULL
PHF6	84295	genome.wustl.edu	37	X	133547854	133547854	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001015877.1	+1	reviewed	p.R196K	1.000	116	0%	155	34.2%	5	0%	probably_damaging(0.971)	tolerated(0.05)	deleterious(0.758)	NULL
MIR542	664617	genome.wustl.edu	37	X	133675431	133675431	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000385050	-1	known	NULL	1.000	308	0%	426	34.7%	0	-	-	-	-	-
FAM122B	159090	genome.wustl.edu	37	X	133922824	133922824	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_145284.5	-1	validated	p.S105Y	1.000	111	0%	117	32.5%	4	100%	probably_damaging(0.999)	deleterious(0.01)	deleterious(0.896)	NULL
MOSPD1	56180	genome.wustl.edu	37	X	134031042	134031042	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_019556.1	-1	provisional	p.R85*	1.000	104	0%	149	32.9%	14	0%	-	-	-	HMMPfam_Motile_Sperm,superfamily_PapD-like
FAM127B	26071	genome.wustl.edu	37	X	134186048	134186048	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001078172.1	-1	validated	p.E31K	0.612	85	0%	122	27%	75	0%	benign(0.083)	tolerated(0.2)	neutral(0.055)	NULL
LOC728470	728470	genome.wustl.edu	37	X	134314204	134314204	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343844.1	-1	model	p.S235Y	0.784	158	0%	148	29.1%	0	-	-	-	-	NULL
LOC650024	650024	genome.wustl.edu	37	X	134348168	134348168	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_001715421.2	+1	model	p.F103	0.019	28	0%	36	30.6%	0	-	-	-	-	NULL
ZNF75D	7626	genome.wustl.edu	37	X	134421448	134421448	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_007131.3	-1	reviewed	p.R385I	1.000	218	0%	251	29.9%	1	0%	probably_damaging(1)	tolerated(0.17)	deleterious(0.559)	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_ZnF_C2H2,superfamily_SSF57667
DDX26B	203522	genome.wustl.edu	37	X	134679450	134679450	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_182540.4	+1	validated	p.L98V	1.000	142	0%	101	25.7%	3	0%	probably_damaging(0.982)	tolerated(0.1)	deleterious(0.713)	superfamily_vWA-like
LOC644717	644717	genome.wustl.edu	37	X	134772447	134772447	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343850.1	-1	model	p.A916V	0.000	20	0%	19	42.1%	0	-	-	-	-	NULL
LOC644717	644717	genome.wustl.edu	37	X	134775036	134775036	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343850.1	-1	model	p.D726Y	0.001	20	0%	16	43.8%	0	-	-	-	-	NULL
LOC644717	644717	genome.wustl.edu	37	X	134807356	134807356	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343850.1	-1	model	p.E596*	0.000	38	0%	39	59%	0	-	-	-	-	NULL
LOC644717	644717	genome.wustl.edu	37	X	134811265	134811265	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	XM_002343850.1	-1	model	p.L181	0.000	9	0.000	13	0.538	0	-	-	-	-	NULL
SAGE1	55511	genome.wustl.edu	37	X	134988651	134988651	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018666.2	+1	reviewed	p.R226L	0.001	210	0%	301	17.3%	0	-	probably_damaging(0.959)	tolerated(0.13)	deleterious(0.655)	NULL
MMGT1	93380	genome.wustl.edu	37	X	135053240	135053240	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173470.1	-1	provisional	p.E37*	1.000	279	0%	317	38.2%	5	0%	-	-	-	HMMPfam_Tmemb_32
MAP7D3	79649	genome.wustl.edu	37	X	135302932	135302932	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024597.3	-1	reviewed	p.V826	0.000	182	0%	251	31.5%	2	0%	-	-	-	NULL
MAP7D3	79649	genome.wustl.edu	37	X	135308094	135308094	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_024597.3	-1	reviewed	p.L705V	0.982	504	0%	644	37%	1	0%	probably_damaging(0.979)	tolerated(0.11)	deleterious(0.694)	HMMPfam_MAP7
GPR112	139378	genome.wustl.edu	37	X	135405100	135405100	+	Silent	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153834.3	+1	reviewed	p.T78	0.000	132	0%	164	30.5%	0	-	-	-	-	superfamily_ConA_like_lec_gl
GPR112	139378	genome.wustl.edu	37	X	135426562	135426562	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153834.3	+1	reviewed	p.N233D	0.992	111	0%	97	24.7%	0	-	probably_damaging(0.967)	deleterious(0.01)	deleterious(0.815)	NULL
GPR112	139378	genome.wustl.edu	37	X	135427322	135427322	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153834.3	+1	reviewed	p.R486I	0.948	140	0%	118	42.4%	0	-	possibly_damaging(0.901)	deleterious(0.01)	deleterious(0.762)	NULL
GPR112	139378	genome.wustl.edu	37	X	135430339	135430339	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153834.3	+1	reviewed	p.P1492S	0.502	75	0%	50	28%	0	-	probably_damaging(0.997)	deleterious(0)	deleterious(0.911)	NULL
GPR112	139378	genome.wustl.edu	37	X	135430340	135430340	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153834.3	+1	reviewed	p.P1492Q	0.607	76	0%	50	40%	0	-	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
GPR112	139378	genome.wustl.edu	37	X	135431696	135431696	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153834.3	+1	reviewed	p.G1944V	0.004	189	0%	127	41.7%	0	-	probably_damaging(0.974)	deleterious(0.02)	deleterious(0.799)	NULL
GPR112	139378	genome.wustl.edu	37	X	135432464	135432464	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_153834.3	+1	reviewed	p.V2200G	0.006	415	0.2%	278	33.5%	0	-	possibly_damaging(0.901)	deleterious(0)	deleterious(0.801)	NULL
BRS3	680	genome.wustl.edu	37	X	135572434	135572434	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001727.1	+1	validated	p.D193N	0.666	193	0%	196	30.1%	0	-	benign(0.003)	tolerated(0.47)	neutral(0.011)	HMMPfam_7tm_1,superfamily_SSF81321
HTATSF1	27336	genome.wustl.edu	37	X	135585080	135585080	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014500.4	+1	reviewed	p.K238N	0.997	163	0%	204	31.9%	16	0%	probably_damaging(0.999)	deleterious(0)	deleterious(0.935)	NULL
HTATSF1	27336	genome.wustl.edu	37	X	135593174	135593174	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014500.4	+1	reviewed	p.E424*	0.910	68	0%	79	27.8%	17	76.4%	-	-	-	NULL
VGLL1	51442	genome.wustl.edu	37	X	135632931	135632931	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000440515	+1	known	p.E131*	0.723	411	0%	374	32.1%	0	-	benign(0)	tolerated(0.37)	neutral(0.019)	NULL
ARHGEF6	9459	genome.wustl.edu	37	X	135762983	135762983	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004840.2	-1	reviewed	p.Q537H	1.000	149	0%	166	31.3%	1	0%	benign(0.001)	tolerated(0.47)	neutral(0.011)	HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like
ARHGEF6	9459	genome.wustl.edu	37	X	135790890	135790890	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004840.2	-1	reviewed	p.F289	0.717	152	0%	176	32.4%	2	0%	-	-	-	HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_DBL homology domain (DH-domain)
ARHGEF6	9459	genome.wustl.edu	37	X	135861632	135861632	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004840.2	-1	reviewed	p.A64T	1.000	232	0%	347	29.1%	0	-	benign(0.004)	tolerated(0.08)	neutral(0.300)	HMMPfam_CH,HMMSmart_SM00033,superfamily_Calponin-homology domain CH-domain
ZIC3	7547	genome.wustl.edu	37	X	136652113	136652113	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_003413.3	+1	reviewed	p.P430T	1.000	139	0%	217	35%	0	-	possibly_damaging(0.8)	tolerated(0.16)	neutral(0.360)	NULL
F9	2158	genome.wustl.edu	37	X	138643737	138643737	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000133.3	+1	reviewed	p.R298Q	0.000	230	0%	266	37.2%	0	-	benign(0.062)	tolerated(0.16)	neutral(0.064)	HMMPfam_Trypsin,HMMSmart_SM00020,superfamily_Trypsin-like serine proteases
MCF2	4168	genome.wustl.edu	37	X	138678815	138678815	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099855.1	-1	reviewed	p.R784*	1.000	316	0%	223	37.7%	0	-	-	-	-	HMMPfam_PH,HMMSmart_PH,superfamily_SSF50729
MCF2	4168	genome.wustl.edu	37	X	138697185	138697185	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001099855.1	-1	reviewed	p.K466N	1.000	271	0%	104	27.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	NULL
ATP11C	286410	genome.wustl.edu	37	X	138820184	138820184	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173694.4	-1	validated	p.M1063T	1.000	186	0%	74	33.8%	10	100%	possibly_damaging(0.582)	tolerated(0.13)	neutral(0.453)	NULL
CXorf66	347487	genome.wustl.edu	37	X	139040347	139040347	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001013403.2	-1	validated	p.K40E	0.001	231	0%	337	33.8%	0	-	possibly_damaging(0.936)	deleterious(0)	deleterious(0.826)	NULL
SOX3	6658	genome.wustl.edu	37	X	139587064	139587064	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005634.2	-1	reviewed	p.A54	0.488	20	0%	19	31.6%	1	100%	-	-	-	NULL
CDR1	1038	genome.wustl.edu	37	X	139865905	139865905	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004065.2	-1	reviewed	p.S209	0.000	373	0%	301	32.6%	0	-	-	-	-	NULL
MAGEC3	139081	genome.wustl.edu	37	X	140926144	140926144	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138702.1	+1	reviewed	p.D15Y	0.002	88	0%	81	38.3%	0	-	unknown(0)	-	-	NULL
MAGEC3	139081	genome.wustl.edu	37	X	140969522	140969522	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138702.1	+1	reviewed	p.I283	0.001	140	0%	180	28.9%	0	-	-	-	-	HMMPfam_MAGE
MAGEC3	139081	genome.wustl.edu	37	X	140985116	140985116	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138702.1	+1	reviewed	p.F524L	0.001	158	0%	242	31.8%	0	-	possibly_damaging(0.786)	tolerated(0.37)	neutral(0.314)	HMMPfam_MAGE
MAGEC3	139081	genome.wustl.edu	37	X	140985270	140985270	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138702.1	+1	reviewed	p.G576W	0.006	182	0%	239	33.9%	0	-	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_MAGE
MAGEC3	139081	genome.wustl.edu	37	X	140985544	140985544	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_138702.1	+1	reviewed	p.D620N	0.003	86	0%	85	35.3%	0	-	probably_damaging(0.991)	tolerated(0.19)	deleterious(0.493)	NULL
MAGEC1	9947	genome.wustl.edu	37	X	140995710	140995710	+	Silent	SNP	G	G	A	rs191655529	by1000genomes	TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005462.4	+1	reviewed	p.S840	0.017	241	0%	243	29.6%	0	-	-	-	-	NULL
SPANXN3	139067	genome.wustl.edu	37	X	142596730	142596730	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009609.2	-1	validated	p.D114Y	0.000	313	0%	366	29.8%	0	-	probably_damaging(0.991)	deleterious(0)	deleterious(0.889)	NULL
SPANXN3	139067	genome.wustl.edu	37	X	142605155	142605155	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009609.2	-1	validated	p.K22T	0.000	736	0%	915	34.2%	0	-	possibly_damaging(0.918)	tolerated(0.07)	deleterious(0.688)	HMMPfam_SPAN-X
SLITRK4	139065	genome.wustl.edu	37	X	142718727	142718727	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173078.3	-1	reviewed	p.F66L	0.999	43	0%	29	27.6%	0	-	benign(0.005)	tolerated(1)	-	superfamily_L domain-like
SLITRK4	139065	genome.wustl.edu	37	X	142718732	142718732	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_173078.3	-1	reviewed	p.N65H	1.000	50	0%	39	33.3%	0	-	probably_damaging(0.953)	tolerated(0.49)	neutral(0.407)	superfamily_L domain-like
SPANXN2	494119	genome.wustl.edu	37	X	142795236	142795236	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009615.1	-1	provisional	p.S148P	0.000	499	0%	530	26.6%	0	-	unknown(0)	tolerated(0.19)	-	NULL
SPANXN2	494119	genome.wustl.edu	37	X	142795367	142795367	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009615.1	-1	provisional	p.S104*	0.002	670	0%	725	25.5%	0	-	-	-	-	NULL
SPANXN1	494118	genome.wustl.edu	37	X	144329130	144329130	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009614.2	+1	reviewed	p.I8	0.021	806	0%	997	32%	0	-	-	-	-	HMMPfam_SPAN-X
SPANXN1	494118	genome.wustl.edu	37	X	144337199	144337199	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001009614.2	+1	reviewed	p.E28D	0.000	343	0%	503	30.4%	0	-	possibly_damaging(0.888)	deleterious(0)	deleterious(0.792)	HMMPfam_SPAN-X
SLITRK2	84631	genome.wustl.edu	37	X	144904884	144904884	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001144003.2	+1	reviewed	p.R314Q	1.000	92	0%	128	30.5%	0	-	probably_damaging(0.961)	tolerated(0.26)	neutral(0.438)	NULL
CXorf1	9142	genome.wustl.edu	37	X	144909318	144909318	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004709.2	+1	validated	p.F41L	0.000	307	0%	237	27.4%	0	-	benign(0)	-	-	NULL
CXorf1	9142	genome.wustl.edu	37	X	144909394	144909394	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004709.2	+1	validated	p.I67V	0.972	283	0%	211	22.3%	0	-	benign(0.055)	-	-	NULL
MIR891B	100126304	genome.wustl.edu	37	X	145082572	145082572	+	RNA	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000401245	-1	known	NULL	0.000	301	0%	371	28.8%	0	-	-	-	-	-
AFF2	2334	genome.wustl.edu	37	X	147582629	147582629	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002025.3	+1	reviewed	p.F4	1.000	204	0%	220	30%	0	-	-	-	-	NULL
AFF2	2334	genome.wustl.edu	37	X	147743667	147743667	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002025.3	+1	reviewed	p.S140Y	0.934	201	0%	271	28%	0	-	probably_damaging(0.998)	deleterious(0.01)	deleterious(0.880)	HMMPfam_AF-4
IDS	3423	genome.wustl.edu	37	X	148564716	148564716	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000202.5	-1	reviewed	p.S405F	0.999	46	0%	73	32.9%	28	0%	possibly_damaging(0.635)	deleterious(0)	deleterious(0.666)	superfamily_Alkaline phosphatase-like
MAGEA11	4110	genome.wustl.edu	37	X	148797686	148797686	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005366.4	+1	reviewed	p.F180L	0.029	114	0%	138	32.6%	0	-	benign(0)	tolerated(0.63)	neutral(0.004)	NULL
MAMLD1	10046	genome.wustl.edu	37	X	149639581	149639581	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005491.3	+1	reviewed	p.T579M	0.000	87	0%	120	34.2%	0	-	probably_damaging(0.97)	deleterious(0.04)	deleterious(0.761)	NULL
HMGB3	3149	genome.wustl.edu	37	X	150154572	150154572	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005342.2	+1	validated	p.D67Y	1.000	159	0%	249	32.5%	105	0%	possibly_damaging(0.774)	deleterious(0)	deleterious(0.733)	HMMPfam_HMG_box,HMMSmart_HMG,superfamily_HMG-box
PRRG3	79057	genome.wustl.edu	37	X	150873844	150873844	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000448324	+1	known	p.R83I	0.007	188	0%	285	32.3%	0	-	possibly_damaging(0.811)	-	-	NULL
CNGA2	1260	genome.wustl.edu	37	X	150912676	150912676	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005140.1	+1	reviewed	p.K567N	1.000	148	0%	206	40.3%	0	-	probably_damaging(0.98)	deleterious(0)	deleterious(0.869)	HMMSmart_cNMP,superfamily_cNMP_binding
GABRE	2564	genome.wustl.edu	37	X	151138740	151138740	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004961.3	-1	reviewed	p.R64K	0.000	237	0%	216	34.3%	0	-	benign(0.001)	tolerated(0.65)	neutral(0.003)	NULL
MAGEA10	4109	genome.wustl.edu	37	X	151303343	151303343	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001011543.1	-1	reviewed	p.L250	0.000	146	0%	204	32.8%	0	-	-	-	-	HMMPfam_MAGE
MAGEA10	4109	genome.wustl.edu	37	X	151303783	151303783	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001011543.1	-1	reviewed	p.Q104K	0.000	265	0%	308	35.1%	0	-	benign(0.002)	tolerated(0.7)	neutral(0.002)	NULL
MIR105-2	406898	genome.wustl.edu	37	X	151562900	151562900	+	RNA	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000385083	-1	known	NULL	1.000	107	0%	105	21%	0	-	-	-	-	-
GABRQ	55879	genome.wustl.edu	37	X	151821527	151821527	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018558.2	+1	reviewed	p.N561T	0.000	111	0%	170	25.3%	0	-	benign(0)	tolerated(0.8)	neutral(0.001)	HMMPfam_Neur_chan_memb,superfamily_Neu_channel_TM
MAGEA12	4111	genome.wustl.edu	37	X	151900098	151900098	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005367.5	-1	reviewed	p.E235K	0.001	333	0%	453	33.6%	0	-	possibly_damaging(0.786)	tolerated(1)	neutral(0.294)	HMMPfam_MAGE
PNMA3	29944	genome.wustl.edu	37	X	152225899	152225899	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_013364.4	+1	reviewed	p.E163*	0.002	77	0%	71	38%	0	-	-	-	-	NULL
MAGEA1	4100	genome.wustl.edu	37	X	152482132	152482132	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004988.4	-1	reviewed	p.F293L	0.003	157	0%	232	29.3%	1	0%	benign(0.083)	tolerated(0.06)	neutral(0.329)	NULL
ZFP92	139735	genome.wustl.edu	37	X	152684172	152684172	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001136273.1	+1	validated	p.K25N	0.990	266	0.4%	419	35.6%	1	0%	-	-	-	HMMPfam_KRAB,HMMSmart_KRAB,superfamily_Krueppel-associated_box
HAUS7	55559	genome.wustl.edu	37	X	152721101	152721101	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017518.6	-1	reviewed	p.D287N	0.709	93	0%	127	32.3%	29	82.7%	probably_damaging(0.999)	tolerated(0.49)	deleterious(0.501)	NULL
BGN	633	genome.wustl.edu	37	X	152771478	152771478	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001711.4	+1	reviewed	p.R170H	0.857	50	0%	94	34%	415	0.4%	possibly_damaging(0.88)	deleterious(0.01)	deleterious(0.749)	HMMPfam_LRR_1,superfamily_SSF52058
BGN	633	genome.wustl.edu	37	X	152772329	152772329	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001711.4	+1	reviewed	p.K240*	1.000	172	0%	258	36%	646	0.1%	-	-	-	superfamily_SSF52058
BGN	633	genome.wustl.edu	37	X	152773751	152773751	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001711.4	+1	reviewed	p.D319N	1.000	70	0%	100	29%	593	0.1%	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	NULL
FAM58A	92002	genome.wustl.edu	37	X	152861527	152861527	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000276345	-1	known	p.I75M	0.864	231	0%	419	32%	37	0%	probably_damaging(0.991)	tolerated(0.09)	deleterious(0.740)	HMMSmart_CYCLIN,superfamily_Cyclin_like
DUSP9	1852	genome.wustl.edu	37	X	152914982	152914982	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001395.2	+1	reviewed	p.E223D	0.978	69	0%	79	32.9%	0	-	benign(0)	tolerated(1)	-	HMMPfam_DSPc,HMMSmart_DSPc,superfamily_SSF52799
SLC6A8	6535	genome.wustl.edu	37	X	152957439	152957439	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000429147	+1	known	p.L35I	0.789	144	0%	267	22.8%	55	0%	-	-	-	HMMPfam_SNF
SLC6A8	6535	genome.wustl.edu	37	X	152960033	152960033	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005629.3	+1	reviewed	p.R514Q	0.987	76	0%	117	38.5%	226	0%	probably_damaging(0.999)	tolerated(0.08)	deleterious(0.790)	HMMPfam_SNF
BCAP31	10134	genome.wustl.edu	37	X	152988654	152988654	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001139457.1	-1	reviewed	p.V83F	1.000	81	0%	180	33.9%	287	0%	possibly_damaging(0.826)	deleterious(0)	deleterious(0.758)	HMMPfam_Bap31
ABCD1	215	genome.wustl.edu	37	X	153001660	153001660	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000033.3	+1	reviewed	p.L392	1.000	110	0%	141	32.6%	8	0%	-	-	-	NULL
ABCD1	215	genome.wustl.edu	37	X	153002666	153002666	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000443684	+1	known	p.R151H	0.345	54	0%	107	30.8%	7	0%	-	-	-	superfamily_P-loop containing nucleoside triphosphate hydrolases
PLXNB3	5365	genome.wustl.edu	37	X	153032714	153032714	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005393.2	+1	reviewed	p.R144	0.738	43	0%	43	30.2%	0	-	-	-	-	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
PLXNB3	5365	genome.wustl.edu	37	X	153035589	153035589	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005393.2	+1	reviewed	p.E558*	0.664	103	0%	157	30.6%	0	-	-	-	-	NULL
SRPK3	26576	genome.wustl.edu	37	X	153049627	153049627	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_014370.3	+1	reviewed	p.S369L	0.039	90	0%	104	39.4%	0	-	benign(0.039)	tolerated(0.25)	neutral(0.039)	superfamily_Kinase_like,HMMPfam_Pkinase
SRPK3	26576	genome.wustl.edu	37	X	153050591	153050591	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000458681	+1	known	p.L94I	0.988	75	0%	78	34.6%	0	-	-	-	-	superfamily_Protein kinase-like (PK-like)
IDH3G	3421	genome.wustl.edu	37	X	153052538	153052538	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004135.2	-1	reviewed	p.E249K	1.000	59	0%	106	40.6%	88	79.5%	benign(0.125)	tolerated(0.06)	neutral(0.333)	HMMPfam_Iso_dh,superfamily_SSF53659
IDH3G	3421	genome.wustl.edu	37	X	153053582	153053582	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_004135.2	-1	reviewed	p.E119K	1.000	230	0%	330	36.4%	94	0%	possibly_damaging(0.68)	tolerated(0.41)	neutral(0.258)	HMMPfam_Iso_dh,superfamily_SSF53659
SSR4	6748	genome.wustl.edu	37	X	153061891	153061891	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_006280.1	+1	reviewed	p.E24K	1.000	105	0%	191	34.6%	1655	0%	unknown(0)	tolerated(0.07)	-	HMMPfam_TRAP-delta
PDZD4	57595	genome.wustl.edu	37	X	153070053	153070053	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_032512.2	-1	provisional	p.E355	0.998	39	0%	44	38.6%	0	-	-	-	-	NULL
AVPR2	554	genome.wustl.edu	37	X	153171047	153171047	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000054.4	+1	reviewed	p.L29	0.000	14	0%	18	55.6%	0	-	-	-	-	superfamily_Family A G protein-coupled receptor-like
ARHGAP4	393	genome.wustl.edu	37	X	153174577	153174577	+	Silent	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001666.4	-1	reviewed	p.R852	0.148	122	0%	193	33.2%	14	0%	-	-	-	NULL
ARHGAP4	393	genome.wustl.edu	37	X	153184624	153184624	+	Silent	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000418750	-1	known	p.L153I	0.042	116	0%	208	28.4%	13	0%	-	-	-	NULL
HCFC1	3054	genome.wustl.edu	37	X	153216837	153216837	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005334.2	-1	reviewed	p.H1827Q	1.000	178	0%	273	31.5%	29	0%	possibly_damaging(0.605)	tolerated(0.18)	neutral(0.266)	HMMSmart_SM00060
HCFC1	3054	genome.wustl.edu	37	X	153220851	153220851	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005334.2	-1	reviewed	p.G1000D	1.000	93	0%	181	32%	16	0%	probably_damaging(0.998)	deleterious(0)	deleterious(0.919)	NULL
IRAK1	3654	genome.wustl.edu	37	X	153279717	153279717	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001569.3	-1	reviewed	p.E439*	0.943	52	0%	60	20%	23	0%	-	-	-	HMMSmart_SM00219,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)
MECP2	4204	genome.wustl.edu	37	X	153296409	153296409	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001110792.1	-1	reviewed	p.E302	1.000	36	0%	49	30.6%	34	0%	-	-	-	NULL
OPN1LW	5956	genome.wustl.edu	37	X	153416189	153416189	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_020061.4	+1	reviewed	p.V58	0.264	169	0%	236	37.3%	0	-	-	-	-	superfamily_SSF81321
OPN1MW	2652	genome.wustl.edu	37	X	153459111	153459111	+	Silent	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000513.2	+1	reviewed	p.P319	0.858	212	0%	329	33.7%	0	-	-	-	-	HMMPfam_7tm_1,PatternScan_OPSIN,superfamily_SSF81321
TKTL1	8277	genome.wustl.edu	37	X	153543543	153543543	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_012253.3	+1	validated	p.C295	0.996	165	0%	292	36%	0	-	-	-	-	HMMPfam_Transket_pyr,superfamily_Thiamin diphosphate-binding fold (THDP-binding)
FLNA	2316	genome.wustl.edu	37	X	153580748	153580748	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001110556.1	-1	reviewed	p.I2190	0.542	85	0%	124	29%	534	0%	-	-	-	HMMSmart_SM00557,superfamily_E set domains,HMMPfam_Filamin
SNORA70	26778	genome.wustl.edu	37	X	153628715	153628715	+	RNA	SNP	T	T	C	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_000011.1	+1	validated	NULL	0.953	8	0.000	15	0.267	49	0%	-	-	-	-
TAZ	6901	genome.wustl.edu	37	X	153640475	153640475	+	Silent	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000116.3	+1	reviewed	p.I54	1.000	46	0%	55	40%	17	0%	-	-	-	HMMPfam_Acyltransferase,superfamily_Glycerol-3-phosphate (1)-acyltransferase
TAZ	6901	genome.wustl.edu	37	X	153641610	153641610	+	RNA	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NR_024048.1	+1	reviewed	NULL	0.473	30	0%	55	38.2%	3	0%	-	-	-	-
PLXNA3	55558	genome.wustl.edu	37	X	153688732	153688732	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017514.3	+1	reviewed	p.P70L	1.000	42	0%	45	35.6%	10	0%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
PLXNA3	55558	genome.wustl.edu	37	X	153688843	153688843	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017514.3	+1	reviewed	p.R107H	1.000	19	0%	29	24.1%	9	0%	possibly_damaging(0.939)	tolerated(0.06)	deleterious(0.707)	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
PLXNA3	55558	genome.wustl.edu	37	X	153689822	153689822	+	Silent	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_017514.3	+1	reviewed	p.K326	1.000	66	0%	100	40%	12	0%	-	-	-	HMMPfam_Sema,HMMSmart_Sema,superfamily_Sema
SLC10A3	8273	genome.wustl.edu	37	X	153716396	153716396	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001142392.1	-1	reviewed	p.A295V	1.000	57	0%	77	39%	33	81.8%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_SBF
CTAG2	30848	genome.wustl.edu	37	X	153880408	153880408	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_172377.3	-1	reviewed	p.R180C	0.000	172	0%	272	29.8%	0	-	probably_damaging(0.965)	deleterious(0)	deleterious(0.851)	NULL
GAB3	139716	genome.wustl.edu	37	X	153927590	153927590	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001081573.1	-1	reviewed	p.D442Y	1.000	220	0%	269	13.8%	0	-	possibly_damaging(0.937)	deleterious(0)	deleterious(0.828)	NULL
DKC1	1736	genome.wustl.edu	37	X	153994631	153994631	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001363.3	+1	reviewed	p.C135Y	1.000	117	0%	130	37.7%	44	0%	benign(0.011)	deleterious(0.01)	neutral(0.406)	HMMPfam_TruB_N,superfamily_PsdUridine_synth_cat_dom
MPP1	4354	genome.wustl.edu	37	X	154007511	154007511	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_002436.3	-1	reviewed	p.E448*	1.000	126	0%	168	28.6%	20	0%	-	-	-	HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases
F8	2157	genome.wustl.edu	37	X	154157054	154157054	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000132.3	-1	reviewed	p.R1671C	0.000	346	0.3%	364	31.6%	1	0%	benign(0.002)	deleterious(0.02)	neutral(0.383)	NULL
F8	2157	genome.wustl.edu	37	X	154158579	154158579	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000132.3	-1	reviewed	p.F1162L	0.001	62	0%	55	23.6%	0	-	benign(0.117)	deleterious(0.02)	neutral(0.393)	NULL
F8	2157	genome.wustl.edu	37	X	154158676	154158676	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000132.3	-1	reviewed	p.R1130M	0.000	132	0%	119	26.1%	0	-	possibly_damaging(0.819)	deleterious(0)	deleterious(0.754)	NULL
F8	2157	genome.wustl.edu	37	X	154159114	154159114	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000132.3	-1	reviewed	p.S984L	0.000	100	0%	78	41%	0	-	benign(0)	tolerated(1)	-	NULL
F8	2157	genome.wustl.edu	37	X	154159727	154159727	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000132.3	-1	reviewed	p.I780L	0.001	419	0%	493	29.8%	0	-	benign(0.009)	tolerated(0.16)	neutral(0.060)	NULL
F8	2157	genome.wustl.edu	37	X	154159916	154159916	+	Missense_Mutation	SNP	G	G	A	rs137852435		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_000132.3	-1	reviewed	p.R717W	1.000	132	0%	133	29.3%	0	-	probably_damaging(1)	deleterious(0.02)	deleterious(0.883)	PatternScan_MULTICOPPER_OXIDASE1,superfamily_Cupredoxins
MTCP1NB	100272147	genome.wustl.edu	37	X	154290175	154290175	+	Silent	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000369479	-1	known	p.C50	0.998	237	0.4%	322	32.9%	44	0%	-	-	-	HMMPfam_DUF1903,superfamily_p8-MTCP1
RAB39B	116442	genome.wustl.edu	37	X	154490101	154490101	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_171998.2	-1	reviewed	p.R210I	1.000	112	0%	188	27.1%	1	0%	possibly_damaging(0.708)	tolerated(0.08)	deleterious(0.555)	HMMSmart_SM00176,superfamily_P-loop containing nucleoside triphosphate hydrolases
CLIC2	1193	genome.wustl.edu	37	X	154563709	154563709	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_001289.4	-1	reviewed	p.V10L	0.002	156	0%	87	39.1%	2	0%	benign(0)	tolerated(0.28)	neutral(0.032)	NULL
TMLHE	55217	genome.wustl.edu	37	X	154736575	154736575	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018196.3	-1	reviewed	p.E327*	1.000	200	0%	91	33%	25	12%	-	-	-	HMMPfam_TauD,superfamily_Clavaminate synthase-like
TMLHE	55217	genome.wustl.edu	37	X	154736729	154736729	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_018196.3	-1	reviewed	p.F275L	1.000	132	0%	67	29.9%	10	60%	probably_damaging(1)	deleterious(0)	deleterious(0.945)	HMMPfam_TauD,superfamily_Clavaminate synthase-like
VAMP7	6845	genome.wustl.edu	37	X	155149505	155149505	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	NM_005638.4	+1	validated	p.L154F	1.000	285	0%	331	29%	11	81.8%	probably_damaging(1)	tolerated(0.05)	deleterious(0.845)	HMMPfam_Synaptobrevin,PatternScan_SYNAPTOBREVIN
VAMP7	6845	genome.wustl.edu	37	X	155171618	155171618	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B5-A0JY-01A-11D-A10B-09	TCGA-B5-A0JY-10A-01D-A10O-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none	1	dbGAP	Illumina GAIIx	5b7c3959-a2be-493e-abe2-ab19eecb946f	ccebab6c-dffb-431e-9bce-bdd0c824ebf4	ENST00000262640	+1	known	p.K200E	0.728	491	0%	446	32.1%	22	0%	unknown(0)	-	-	NULL
