writing sdrf to UCS.merger.sdrf.txt

------------------------------------------------------------------
2014-02-17 13:00:40.385706
. ['/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/UCS/6750507/infile1.input.tsv']

Make a softlink......

Flag: True.
Processing input file to make a softlink...: /xchip/cga/gdac-prod/tcga-gdac/jobResults/MutationPackagerCoverage/UCS/6750507/infile1.input.tsv

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A4R8-01.wig.txt
('', None)
0
d4ae5c7caa38f755282002de2900d6a9
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A4RA-01.wig.txt
('', None)
0
3536b0ce85f6f75d274280c3c168d712
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A4RD-01.wig.txt
('', None)
0
b0140ab937e262713091626a08fca7f1
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A4RF-01.wig.txt
('', None)
0
c705fd2bbf7e6fa6f3f7ceabdef01e2b
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A4RJ-01.wig.txt
('', None)
0
010aba132ba42fdb97b8618b17838839
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A4RM-01.wig.txt
('', None)
0
1e632cc6a3934ece6191ce0672d4cf65
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A4RN-01.wig.txt
('', None)
0
6bd9f257ae236e358ab73f2a39a68ca6
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A4RO-01.wig.txt
('', None)
0
9a3acd572d4331cfdfc9c525a4d21d77
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A4RS-01.wig.txt
('', None)
0
84467708f7d908e6c89caf1e291e4b20
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A4RT-01.wig.txt
('', None)
0
6e40df740ebda294e3a15510dbcd4fcf
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A4RU-01.wig.txt
('', None)
0
1cdf0d5bb564cfd003fbb3274cbad607
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A4RV-01.wig.txt
('', None)
0
ccd38a9f6d9e7f4a16f5e32b8562fd86
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A59E-01.wig.txt
('', None)
0
d0a2a78db42c2368d6e91de277fefeaa
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N5-A59F-01.wig.txt
('', None)
0
9901f1b21104ed556ff4561a1ca325ba
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N6-A4V9-01.wig.txt
('', None)
0
a2dd7d3f152e29ab2ea939623aec8d5c
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N6-A4VC-01.wig.txt
('', None)
0
05f1584eb9114e0616f5fff5fe050df9
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N6-A4VD-01.wig.txt
('', None)
0
8173799f5849af9dc146909bb0c0f0f0
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N6-A4VE-01.wig.txt
('', None)
0
a11997dab0158b743b3f6ef8c67ef92f
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N6-A4VF-01.wig.txt
('', None)
0
d725a18cadbe59d58fe3e10bb0e3cd22
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N6-A4VG-01.wig.txt
('', None)
0
96c691c44f39a315d1087fb9081c23a9
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N7-A4Y0-01.wig.txt
('', None)
0
8eaa5cf3e8910f98a47754dec369bd37
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N7-A4Y5-01.wig.txt
('', None)
0
1dc5a8e4e88c77e09c112452951e46f3
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N7-A4Y8-01.wig.txt
('', None)
0
5924b3fe415e13859eb8eb1a93687240
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N7-A59B-01.wig.txt
('', None)
0
c8f5bba69590e4a6bcd97fe24de24c94
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N8-A4PI-01.wig.txt
('', None)
0
006ad88c74a6b5e3813e30086edad167
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N8-A4PL-01.wig.txt
('', None)
0
5d220fb30b9a6c38a45d8ec85ba55d04
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N8-A4PM-01.wig.txt
('', None)
0
237a8f3ee55eb7afffa1243e94ca9fb4
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N8-A4PN-01.wig.txt
('', None)
0
fdae1a2affb4e564cab55345910be61d
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N8-A4PO-01.wig.txt
('', None)
0
c0050dd649796dc3d31a7ef23466583a
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N8-A4PP-01.wig.txt
('', None)
0
b51ce2bd2fc2ea543f75390d77e109ca
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N8-A4PQ-01.wig.txt
('', None)
0
51dcc95c65b0f43a4edbcf9e8c3f2ce1
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N8-A56S-01.wig.txt
('', None)
0
7504eab0353c3ae2c960d8ac0480c7d3
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N9-A4PZ-01.wig.txt
('', None)
0
aa62281306d130366a60563d08cec893
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N9-A4Q1-01.wig.txt
('', None)
0
ae5ed00e202222ee186ff861a37fb3c3
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N9-A4Q3-01.wig.txt
('', None)
0
109a85c310ca82f3960f17ca8faa3dda
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N9-A4Q4-01.wig.txt
('', None)
0
0dbe3d62b933e044c15d49c27a68f95c
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N9-A4Q7-01.wig.txt
('', None)
0
3493bd71cd3afe98786d8cf99d48cdab
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-N9-A4Q8-01.wig.txt
('', None)
0
94b4722f657fee8ebac9df7ae2eb92b3
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NA-A4QV-01.wig.txt
('', None)
0
f6dda8f11efccd0c350d3ec7a6d46f89
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NA-A4QW-01.wig.txt
('', None)
0
17c64fc272a9cdda274aed05a4b450c6
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NA-A4QX-01.wig.txt
('', None)
0
eba53932243033af56a6939125a8ca71
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NA-A4QY-01.wig.txt
('', None)
0
f3f0483d6944e8e1461bdab3807c8d83
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NA-A4R0-01.wig.txt
('', None)
0
cba8dc685a4e008f51249502d135dfff
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NA-A4R1-01.wig.txt
('', None)
0
0235016b3eb5f73560c78585b6f6da13
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NA-A5I1-01.wig.txt
('', None)
0
a71ddae549af84cd4d2ca8e89a975634
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-ND-A4W6-01.wig.txt
('', None)
0
f3858ce66832b919229ae2de5da44bbc
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-ND-A4WA-01.wig.txt
('', None)
0
9d16f5d4c433dec4616332fbd8ac32f1
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-ND-A4WF-01.wig.txt
('', None)
0
35ced2cc38922972d611eee1d6ee0485
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NF-A4WU-01.wig.txt
('', None)
0
d394dbe07293267b2c1b9a14c612bdef
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NF-A4WX-01.wig.txt
('', None)
0
3cd6247b6dd4b42ab692d83e28cabbd3
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NF-A4X2-01.wig.txt
('', None)
0
94ceef8daaeabfb536eac8b2c2343019
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NF-A5CP-01.wig.txt
('', None)
0
56c47c67b4509766e833f3b087e49452
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NG-A4VU-01.wig.txt
('', None)
0
6858d47f9e81ae90d28d95c24884092a
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-NG-A4VW-01.wig.txt
('', None)
0
70a7e41194c9424ee3c625a0aaabab8f
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-QM-A5NM-01.wig.txt
('', None)
0
7ee97083332977c51ae3f38e0ad0882d
It is not in the dictionary

md5sum /xchip/gdac_data/normalized/diced/ucs/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_UCS.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-QN-A5NN-01.wig.txt
('', None)
0
25af43c2de7b8537c8dcb9310aa0f885
It is not in the dictionary
Make a softlink is done.


