Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A1CF	29974	broad.mit.edu	37	10	52569546	52569546	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215813272	215813272	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215833452	215833452	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48311611	48311611	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48684387	48684387	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67030038	67030038	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB4	5244	broad.mit.edu	37	7	87031578	87031578	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48231969	48231969	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183682968	183682968	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD1	215	broad.mit.edu	37	X	153001671	153001671	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG2	9429	broad.mit.edu	37	4	89022469	89022469	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABRA	137735	broad.mit.edu	37	8	107773614	107773614	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35453853	35453853	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAT2	39	broad.mit.edu	37	6	160199279	160199279	+	Silent	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	32364581	32364581	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOXL	55289	broad.mit.edu	37	2	111542323	111542323	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2B	348158	broad.mit.edu	37	16	20551983	20551983	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR1A	10121	broad.mit.edu	37	10	104240541	104240541	+	3'UTR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1C	130399	broad.mit.edu	37	2	158397769	158397769	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127760250	127760250	+	Intron	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106691613	106691613	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106758260	106758261	+	Intron	DNP	CC	AA	AA			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106916970	106916970	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106926439	106926439	+	RNA	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106926585	106926585	+	Intron	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107183337	107183337	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33615811	33615811	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72434357	72434357	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS19	171019	broad.mit.edu	37	5	129019893	129019893	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS19	171019	broad.mit.edu	37	5	129040017	129040017	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28306899	28306899	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS5	11096	broad.mit.edu	37	21	28307030	28307030	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64447678	64447678	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64756173	64756173	+	Intron	DEL	A	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAR	103	broad.mit.edu	37	1	154561176	154561177	+	Intron	DNP	GG	AA	AA			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7695931	7695931	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7804683	7804683	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1B	125	broad.mit.edu	37	4	100232725	100232725	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH7	131	broad.mit.edu	37	4	100349490	100349490	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AEBP2	121536	broad.mit.edu	37	12	19609424	19609424	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L2	84632	broad.mit.edu	37	10	116062394	116062394	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP5	729092	broad.mit.edu	37	10	75434251	75434251	+	3'UTR	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL2	79841	broad.mit.edu	37	11	47727216	47727216	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105420473	105420473	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP6	9472	broad.mit.edu	37	14	33046386	33046386	+	Nonsense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP6	9472	broad.mit.edu	37	14	33293096	33293096	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH3B1	221	broad.mit.edu	37	11	67787274	67787274	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG8	79053	broad.mit.edu	37	11	77835389	77835389	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114279144	114279144	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114290956	114290956	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61956229	61956229	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1A	23294	broad.mit.edu	37	6	34985812	34985812	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS4B	257629	broad.mit.edu	37	16	21262123	21262123	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26463539	26463539	+	Missense_Mutation	SNP	G	T	T	rs150999282		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101477524	101477524	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANPEP	290	broad.mit.edu	37	15	90328846	90328846	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA10	11199	broad.mit.edu	37	4	169102724	169102724	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA11	311	broad.mit.edu	37	10	81926685	81926685	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOX1	316	broad.mit.edu	37	2	201521559	201521559	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2M1	1173	broad.mit.edu	37	3	183896907	183896907	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3S1	1176	broad.mit.edu	37	5	115249134	115249134	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APH1B	83464	broad.mit.edu	37	15	63597759	63597759	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3H	164668	broad.mit.edu	37	22	39496197	39496197	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOL6	80830	broad.mit.edu	37	22	36052348	36052348	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115351451	115351451	+	Silent	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQR	9716	broad.mit.edu	37	15	35176875	35176875	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAF	369	broad.mit.edu	37	X	47426324	47426324	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARAP2	116984	broad.mit.edu	37	4	36150077	36150077	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP28	79822	broad.mit.edu	37	18	6895154	6895154	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156910211	156910211	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156910213	156910213	+	Silent	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF12	23365	broad.mit.edu	37	11	120348166	120348166	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL6IP1	23204	broad.mit.edu	37	16	18809061	18809061	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC3	219681	broad.mit.edu	37	10	23287319	23287319	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMCX5	64860	broad.mit.edu	37	X	101858906	101858906	+	3'UTR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB15	142685	broad.mit.edu	37	7	123267082	123267082	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB15	142685	broad.mit.edu	37	7	123269175	123269175	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176857281	176857281	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31319913	31319913	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG2B	55102	broad.mit.edu	37	14	96779364	96779364	+	Intron	SNP	C	A	A	rs149987857	by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A1	476	broad.mit.edu	37	1	116926831	116926831	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B4	23439	broad.mit.edu	37	X	119504879	119504879	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B4	493	broad.mit.edu	37	1	203626576	203626576	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B2	57198	broad.mit.edu	37	1	154319197	154319197	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76920178	76920178	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZI1	22994	broad.mit.edu	37	17	79182689	79182689	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH1	571	broad.mit.edu	37	21	30714991	30714991	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS9	27241	broad.mit.edu	37	7	33316611	33316611	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAP31	10134	broad.mit.edu	37	X	152969270	152969270	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCYRN1	618	broad.mit.edu	37	X	70535128	70535128	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDP1	55814	broad.mit.edu	37	5	70808256	70808256	+	Splice_Site	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BGN	633	broad.mit.edu	37	X	152773575	152773575	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60546676	60546676	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC2	329	broad.mit.edu	37	11	102248146	102248146	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPER	168667	broad.mit.edu	37	7	33976923	33976923	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13605199	13605199	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOLA2	552900	broad.mit.edu	37	16	30034902	30034902	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79945592	79945592	+	Splice_Site	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTRC	8945	broad.mit.edu	37	10	103298102	103298102	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1	699	broad.mit.edu	37	2	111395742	111395742	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf35	55196	broad.mit.edu	37	12	32137950	32137950	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf72	254013	broad.mit.edu	37	12	31814989	31814989	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf33	84935	broad.mit.edu	37	13	31480616	31480616	+	5'UTR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf11	146325	broad.mit.edu	37	16	614385	614385	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C17orf47	284083	broad.mit.edu	37	17	56619965	56619965	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30926363	30926363	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF2	114898	broad.mit.edu	37	5	159781811	159781811	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf141	400757	broad.mit.edu	37	1	67558821	67558821	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf94	84970	broad.mit.edu	37	1	34684357	34684357	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf112	140688	broad.mit.edu	37	20	31062425	31062425	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf132	140699	broad.mit.edu	37	20	35749391	35749391	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf185	359710	broad.mit.edu	37	20	31661283	31661283	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf194	25943	broad.mit.edu	37	20	3296562	3296562	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf197	284756	broad.mit.edu	37	20	58644975	58644975	+	5'UTR	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf27A	29798	broad.mit.edu	37	2	132481304	132481304	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf49	79074	broad.mit.edu	37	2	105959223	105959223	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf54	79919	broad.mit.edu	37	2	241829664	241829664	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf84	653140	broad.mit.edu	37	2	24413506	24413506	+	3'UTR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf85	285093	broad.mit.edu	37	2	242814788	242814788	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf1	51300	broad.mit.edu	37	3	119217733	119217733	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf39	84892	broad.mit.edu	37	3	43121132	43121132	+	3'UTR	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf17	84103	broad.mit.edu	37	4	100443752	100443752	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf170	221322	broad.mit.edu	37	6	121401997	121401997	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf170	221322	broad.mit.edu	37	6	121577441	121577441	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40955683	40955684	+	Intron	DNP	GG	TT	TT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACHD1	57685	broad.mit.edu	37	1	65107424	65107424	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181701768	181701768	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181706767	181706768	+	Missense_Mutation	DNP	CT	AA	AA			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181765861	181765861	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49074373	49074373	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81588571	81588571	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81595047	81595047	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81643697	81643697	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG3	10368	broad.mit.edu	37	16	24268274	24268274	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG6	59285	broad.mit.edu	37	19	54501667	54501667	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG8	59283	broad.mit.edu	37	19	54466459	54466459	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159162528	159162528	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALML3	810	broad.mit.edu	37	10	5567052	5567052	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMKK1	84254	broad.mit.edu	37	17	3773058	3773058	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7792506	7792506	+	Splice_Site	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CANX	821	broad.mit.edu	37	5	179137146	179137146	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN13	92291	broad.mit.edu	37	2	30977208	30977208	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN6	827	broad.mit.edu	37	X	110490843	110490843	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN7	23473	broad.mit.edu	37	3	15282026	15282026	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARM1	10498	broad.mit.edu	37	19	11018634	11018635	+	Intron	DNP	GG	TT	TT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP2	835	broad.mit.edu	37	7	142985564	142985564	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP7	840	broad.mit.edu	37	10	115481472	115481472	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASR	846	broad.mit.edu	37	3	122003461	122003461	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASS4	57091	broad.mit.edu	37	20	55033349	55033349	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPERB	79820	broad.mit.edu	37	14	92054420	92054420	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC109A	90550	broad.mit.edu	37	10	74631166	74631166	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC19	25790	broad.mit.edu	37	1	159842720	159842720	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC76	54482	broad.mit.edu	37	1	100598771	100598771	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC85A	114800	broad.mit.edu	37	2	56420277	56420277	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKAR	886	broad.mit.edu	37	4	26490990	26490990	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL28	56477	broad.mit.edu	37	5	43382065	43382065	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNB3	85417	broad.mit.edu	37	X	50094666	50094666	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNYL1	151195	broad.mit.edu	37	2	208591507	208591507	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD164	8763	broad.mit.edu	37	6	109698925	109698925	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD226	10666	broad.mit.edu	37	18	67534622	67534622	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC20B	166979	broad.mit.edu	37	5	54415862	54415862	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59166738	59166738	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH3	1001	broad.mit.edu	37	16	68718741	68718741	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK5RAP3	80279	broad.mit.edu	37	17	46052493	46052493	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK6	1021	broad.mit.edu	37	7	92404042	92404042	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR2	1952	broad.mit.edu	37	1	109810586	109810586	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP135	9662	broad.mit.edu	37	4	56837410	56837410	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP97	79598	broad.mit.edu	37	3	101443408	101443408	+	5'Flank	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES1	1066	broad.mit.edu	37	16	55846674	55846674	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES7	221223	broad.mit.edu	37	16	55893498	55893498	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGNL1	84952	broad.mit.edu	37	15	57809044	57809044	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1L	9557	broad.mit.edu	37	1	146751897	146751897	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHIC1	53344	broad.mit.edu	37	X	72899193	72899193	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHM	1121	broad.mit.edu	37	X	85213885	85213885	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA1	1134	broad.mit.edu	37	2	175624016	175624016	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB4	1143	broad.mit.edu	37	15	78953310	78953310	+	5'Flank	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHUK	1147	broad.mit.edu	37	10	101953696	101953696	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIITA	4261	broad.mit.edu	37	16	11000871	11000871	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC10A	10462	broad.mit.edu	37	17	6979955	6979955	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLU	1191	broad.mit.edu	37	8	27468189	27468189	+	5'Flank	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNBD1	168975	broad.mit.edu	37	8	87951773	87951773	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6261575	6261575	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR1	10256	broad.mit.edu	37	1	26515944	26515944	+	Nonsense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT10	25904	broad.mit.edu	37	3	32746537	32746537	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNR2	1269	broad.mit.edu	37	1	24227953	24227953	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNST	163882	broad.mit.edu	37	1	246829232	246829232	+	3'UTR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51258590	51258590	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103462789	103462789	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103544276	103544276	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121312758	121312758	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121353627	121353627	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101796745	101796745	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109858929	109858929	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189871540	189871540	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A4	1286	broad.mit.edu	37	2	227877074	227877074	+	Intron	SNP	G	T	T	rs76763554	byFrequency;by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107438410	107438410	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189923246	189923246	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A3	50509	broad.mit.edu	37	19	10087341	10087341	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A1	1291	broad.mit.edu	37	21	47402746	47402746	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A2	1292	broad.mit.edu	37	21	47546265	47546265	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMMD6	170622	broad.mit.edu	37	13	76112016	76112016	+	5'Flank	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPG2	26958	broad.mit.edu	37	7	130150671	130150671	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB1	64506	broad.mit.edu	37	15	83226624	83226624	+	Silent	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE5	57699	broad.mit.edu	37	6	36711249	36711249	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE5	57699	broad.mit.edu	37	6	36711440	36711440	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211444258	211444258	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211525369	211525369	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM1	56265	broad.mit.edu	37	20	2775080	2775080	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM1	56265	broad.mit.edu	37	20	2776118	2776118	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125558486	125558486	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB2	286204	broad.mit.edu	37	9	126139094	126139094	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREG2	200407	broad.mit.edu	37	2	101992212	101992212	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3038632	3038632	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4645849	4645849	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113518775	113518775	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1A1L	122011	broad.mit.edu	37	13	37679171	37679171	+	Frame_Shift_Del	DEL	G	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1G3	1456	broad.mit.edu	37	5	122950054	122950054	+	Missense_Mutation	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CT47B1	643311	broad.mit.edu	37	X	120008640	120008640	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE1	64693	broad.mit.edu	37	18	19996925	19996925	+	Nonsense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTDP1	9150	broad.mit.edu	37	18	77489231	77489231	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80831226	80831226	+	Silent	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	69366571	69366571	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf26	51260	broad.mit.edu	37	X	75394862	75394862	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYFIP2	26999	broad.mit.edu	37	5	156747733	156747733	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLC2	1539	broad.mit.edu	37	9	105767378	105767379	+	Missense_Mutation	DNP	AG	TT	TT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143959284	143959284	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A7	1549	broad.mit.edu	37	19	41533565	41533565	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2D6	1565	broad.mit.edu	37	22	42523761	42523761	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F8	11283	broad.mit.edu	37	19	15734084	15734084	+	Nonsense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYYR1	116159	broad.mit.edu	37	21	27840859	27840859	+	Silent	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
D4S234E	27065	broad.mit.edu	37	4	4393076	4393076	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB1	1600	broad.mit.edu	37	1	58993032	58993032	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAGLA	747	broad.mit.edu	37	11	61511535	61511535	+	Silent	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DARC	2532	broad.mit.edu	37	1	159175317	159175317	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBN1	1627	broad.mit.edu	37	5	176885479	176885479	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF12L2	340578	broad.mit.edu	37	X	125299020	125299020	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF4	26094	broad.mit.edu	37	14	73421133	73421133	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155156682	155156682	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155219891	155219891	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDHD2	23259	broad.mit.edu	37	8	38099825	38099825	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDO	8528	broad.mit.edu	37	6	110714065	110714065	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX55	57696	broad.mit.edu	37	12	124102988	124102988	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEF6	50619	broad.mit.edu	37	6	35278556	35278556	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB112	245915	broad.mit.edu	37	6	50016286	50016286	+	Frame_Shift_Del	DEL	C	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2C	163259	broad.mit.edu	37	1	115138582	115138582	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGAT1	8694	broad.mit.edu	37	8	145541627	145541627	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX35	60625	broad.mit.edu	37	20	37656980	37656980	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC1	116093	broad.mit.edu	37	2	189599710	189599710	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH2	146754	broad.mit.edu	37	17	7705029	7705029	+	Splice_Site	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21071571	21071571	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13721177	13721177	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196915773	196915773	+	Intron	SNP	T	C	C	rs139069790	by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11572727	11572727	+	Missense_Mutation	SNP	G	T	T	rs61745415	byFrequency;by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11865411	11865411	+	Silent	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB14	79982	broad.mit.edu	37	4	100829884	100829884	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTT	1791	broad.mit.edu	37	10	98080317	98080317	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169098042	169098042	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169469116	169469116	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51264852	51264852	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK9	23348	broad.mit.edu	37	13	99481647	99481647	+	Nonsense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK9	23348	broad.mit.edu	37	13	99515237	99515237	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK2	9046	broad.mit.edu	37	8	21769797	21769797	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOLK	22845	broad.mit.edu	37	9	131708450	131708450	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	115991635	115991635	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL5	56896	broad.mit.edu	37	2	27147943	27147943	+	Intron	DEL	G	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRAP1	10589	broad.mit.edu	37	11	65688902	65688902	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRG2	1819	broad.mit.edu	37	17	18002415	18002415	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC1	1823	broad.mit.edu	37	18	28736036	28736036	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117314471	117314471	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29039177	29039177	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28985942	28985942	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56391558	56391558	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUXA	503835	broad.mit.edu	37	19	57672011	57672011	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95457504	95457504	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95614096	95614096	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2H1	79659	broad.mit.edu	37	11	103327091	103327091	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC2LI1	51626	broad.mit.edu	37	2	44014219	44014219	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1L	199221	broad.mit.edu	37	3	137820499	137820499	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F3	1871	broad.mit.edu	37	6	20490840	20490840	+	3'UTR	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDEM3	80267	broad.mit.edu	37	1	184663205	184663205	+	Nonsense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38430170	38430171	+	Intron	DNP	CC	AT	AT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C2	27161	broad.mit.edu	37	8	141542158	141542158	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C2	27161	broad.mit.edu	37	8	141570586	141570586	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELL3	80237	broad.mit.edu	37	15	44066902	44066902	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPEP	2028	broad.mit.edu	37	4	111427891	111427891	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5438167	5438167	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB49	2039	broad.mit.edu	37	8	21938027	21938027	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89478448	89478448	+	Intron	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97251132	97251132	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134911494	134911494	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPSTI1	94240	broad.mit.edu	37	13	43474465	43474465	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERC2	26059	broad.mit.edu	37	3	55922479	55922479	+	Missense_Mutation	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERICH1	157697	broad.mit.edu	37	8	618725	618725	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESPNL	339768	broad.mit.edu	37	2	239039107	239039107	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOSC7	23016	broad.mit.edu	37	3	45030648	45030648	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXTL1	2134	broad.mit.edu	37	1	26356869	26356869	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72182002	72182002	+	Silent	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F11R	50848	broad.mit.edu	37	1	160970254	160970254	+	Intron	DEL	C	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM110B	90362	broad.mit.edu	37	8	59059927	59059927	+	3'UTR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM153B	202134	broad.mit.edu	37	5	175528024	175528024	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM153B	202134	broad.mit.edu	37	5	175528026	175528026	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM172A	83989	broad.mit.edu	37	5	93217245	93217245	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM48B1	100130302	broad.mit.edu	37	X	24381854	24381854	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067649	190067649	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190234233	190234233	+	Intron	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12216327	12216328	+	Intron	INS	-	TA	TA			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702812	40702812	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83C	128876	broad.mit.edu	37	20	33875579	33875579	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83G	644815	broad.mit.edu	37	17	18891758	18891758	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM92A3	403315	broad.mit.edu	37	4	183959064	183959064	+	RNA	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCG	2189	broad.mit.edu	37	9	35075050	35075050	+	Nonsense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT2	2196	broad.mit.edu	37	5	150921910	150921910	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92430621	92430621	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92507263	92507263	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLN2	2199	broad.mit.edu	37	3	13613083	13613083	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO24	26261	broad.mit.edu	37	7	100190686	100190686	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO33	254170	broad.mit.edu	37	14	39870542	39870542	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN2	2220	broad.mit.edu	37	9	137772603	137772603	+	5'Flank	SNP	G	T	T	rs144529729	by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL6	343413	broad.mit.edu	37	1	159776121	159776121	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF12	2257	broad.mit.edu	37	3	192126018	192126018	+	5'UTR	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF13	2258	broad.mit.edu	37	X	137793019	137793019	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF14	2259	broad.mit.edu	37	13	102454356	102454356	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIG4	9896	broad.mit.edu	37	6	110083281	110083281	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNA	2316	broad.mit.edu	37	X	153589621	153589621	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28609551	28609551	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240458368	240458368	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNDC7	163479	broad.mit.edu	37	1	109276257	109276257	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1	2346	broad.mit.edu	37	11	49204738	49204738	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14813200	14813200	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG2B	441581	broad.mit.edu	37	10	135440053	135440053	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131219567	131219567	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD1	22844	broad.mit.edu	37	9	37746564	37746564	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49371639	49371639	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12735849	12735849	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48622677	48622677	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49216144	49216144	+	Missense_Mutation	SNP	C	A	A	rs142383710	byFrequency	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162697067	162697067	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT10	84750	broad.mit.edu	37	8	33246950	33246950	+	Missense_Mutation	SNP	C	T	T	rs149448636		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT4	2526	broad.mit.edu	37	11	94278921	94278921	+	3'UTR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101056346	101056346	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA1	2554	broad.mit.edu	37	5	161302634	161302634	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26806188	26806188	+	Missense_Mutation	SNP	T	G	G	rs149963014	by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161576210	161576210	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAN	8139	broad.mit.edu	37	16	81390512	81390512	+	Silent	SNP	G	T	T	rs138585506		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130151417	130151417	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCLC	2729	broad.mit.edu	37	6	53372308	53372311	+	Frame_Shift_Del	DEL	TATC	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GC	2638	broad.mit.edu	37	4	72622413	72622413	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF6	392255	broad.mit.edu	37	8	97156985	97156985	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFI1B	8328	broad.mit.edu	37	9	135865147	135865148	+	Missense_Mutation	DNP	CG	TT	TT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGA6A	342096	broad.mit.edu	37	15	74372872	74372872	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOT1	2805	broad.mit.edu	37	10	101190365	101190365	+	5'UTR	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOT2	2806	broad.mit.edu	37	16	58752583	58752583	+	Missense_Mutation	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC2	221914	broad.mit.edu	37	7	99771579	99771579	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	93879811	93879811	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR150	285601	broad.mit.edu	37	5	94956174	94956174	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR182	11318	broad.mit.edu	37	12	57389008	57389008	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRIN1	114787	broad.mit.edu	37	5	176026654	176026654	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104433015	104433015	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM5	2915	broad.mit.edu	37	11	88583213	88583213	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7721839	7721839	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRN	2896	broad.mit.edu	37	17	42426510	42426510	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2E1	2960	broad.mit.edu	37	3	120469602	120469602	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP4	23560	broad.mit.edu	37	10	1053127	1053127	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAPLN4	404037	broad.mit.edu	37	19	19381273	19381273	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC1	3065	broad.mit.edu	37	1	32796425	32796425	+	Nonsense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18869106	18869106	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18975281	18975281	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC1	8925	broad.mit.edu	37	15	63943546	63943546	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28424002	28424002	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28457728	28457728	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2AC	8338	broad.mit.edu	37	1	149858837	149858837	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HKDC1	80201	broad.mit.edu	37	10	71005913	71005913	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGB3	3149	broad.mit.edu	37	X	150154428	150154428	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA3P1	10151	broad.mit.edu	37	10	44285733	44285733	+	Silent	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRPDL	9987	broad.mit.edu	37	4	83350391	83350391	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB1	3211	broad.mit.edu	37	17	46608074	46608074	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB9	3219	broad.mit.edu	37	17	46700538	46700538	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS3	84343	broad.mit.edu	37	3	148878161	148878161	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE2	60495	broad.mit.edu	37	10	100995265	100995265	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152187689	152187689	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD17B8	7923	broad.mit.edu	37	6	33173527	33173527	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA8	3312	broad.mit.edu	37	11	122931962	122931962	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPB2	3316	broad.mit.edu	37	11	111784040	111784040	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR5A	3361	broad.mit.edu	37	7	154862900	154862900	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUNK	30811	broad.mit.edu	37	21	33371024	33371024	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53674396	53674396	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70926487	70926487	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYOU1	10525	broad.mit.edu	37	11	118922015	118922015	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	95015708	95015708	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDUA	3425	broad.mit.edu	37	4	994668	994668	+	Splice_Site	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT52	51098	broad.mit.edu	37	20	42249584	42249584	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP2	10644	broad.mit.edu	37	3	185374930	185374930	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF21	84966	broad.mit.edu	37	1	18702611	18702611	+	Intron	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF5	150084	broad.mit.edu	37	21	41143096	41143096	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF9B	22997	broad.mit.edu	37	11	133789800	133789800	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKE	9641	broad.mit.edu	37	1	206666678	206666678	+	Missense_Mutation	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12RB2	3595	broad.mit.edu	37	1	67852195	67852195	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17B	27190	broad.mit.edu	37	5	148758826	148758826	+	5'UTR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1A	3552	broad.mit.edu	37	2	113537312	113537312	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RG	3561	broad.mit.edu	37	X	70331295	70331295	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL9R	3581	broad.mit.edu	37	X	155231204	155231204	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILDR1	286676	broad.mit.edu	37	3	121712106	121712106	+	Frame_Shift_Del	DEL	C	-	-	rs146620043		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS9	55756	broad.mit.edu	37	8	28707883	28707883	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO5	3843	broad.mit.edu	37	13	98641334	98641334	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO5	3843	broad.mit.edu	37	13	98668954	98668954	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75902107	75902107	+	Nonsense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15628734	15628734	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15647806	15647806	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAM3	83700	broad.mit.edu	37	11	133993906	133993906	+	Intron	DEL	C	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KBTBD2	25948	broad.mit.edu	37	7	32910171	32910171	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA10	3744	broad.mit.edu	37	1	111060137	111060137	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	47991437	47991437	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	211033609	211033609	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH7	90134	broad.mit.edu	37	2	163279808	163279808	+	Intron	DEL	C	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ12	3768	broad.mit.edu	37	17	21319605	21319605	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK13	56659	broad.mit.edu	37	14	90650865	90650865	+	Missense_Mutation	SNP	G	A	A	rs115329697	byFrequency;by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215179452	215179452	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196296187	196296187	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36776447	36776447	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM6B	23135	broad.mit.edu	37	17	7749462	7749462	+	Frame_Shift_Del	DEL	C	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55972900	55972900	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55981184	55981185	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10597396	10597396	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142659392	142659392	+	5'UTR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KHDRBS3	10656	broad.mit.edu	37	8	136594267	136594267	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0802	23255	broad.mit.edu	37	18	8783766	8783766	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0892	23383	broad.mit.edu	37	19	19456050	19456050	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1324L	222223	broad.mit.edu	37	7	86554801	86554801	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113723453	113723453	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1530	57654	broad.mit.edu	37	4	1369127	1369127	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1751	85452	broad.mit.edu	37	1	1895392	1895392	+	Intron	DEL	G	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIDINS220	57498	broad.mit.edu	37	2	8919174	8919174	+	Silent	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2C	11004	broad.mit.edu	37	1	45205397	45205397	+	5'Flank	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF3A	11127	broad.mit.edu	37	5	132069746	132069746	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4B	285643	broad.mit.edu	37	5	154395531	154395531	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DS4	3809	broad.mit.edu	37	19	55349047	55349047	+	Silent	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DS4	3809	broad.mit.edu	37	19	55351062	55351062	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIT	3815	broad.mit.edu	37	4	55598246	55598246	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL31	401265	broad.mit.edu	37	6	53516934	53516934	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK2	3817	broad.mit.edu	37	19	51379851	51379851	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNG1	3827	broad.mit.edu	37	3	186450616	186450616	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNTC1	9735	broad.mit.edu	37	12	123072257	123072257	+	Splice_Site	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPNA4	3840	broad.mit.edu	37	3	160232067	160232067	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT14	3861	broad.mit.edu	37	17	39742827	39742827	+	Frame_Shift_Del	DEL	C	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT1	3848	broad.mit.edu	37	12	53073922	53073922	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT25	147183	broad.mit.edu	37	17	38906948	38906948	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53040627	53040627	+	Silent	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT31	3881	broad.mit.edu	37	17	39553377	39553377	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT74	121391	broad.mit.edu	37	12	52966953	52966953	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT85	3891	broad.mit.edu	37	12	52760934	52760934	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP19-3	337970	broad.mit.edu	37	21	31863900	31863900	+	3'UTR	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP23-1	337963	broad.mit.edu	37	21	31720852	31720852	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP6-1	337966	broad.mit.edu	37	21	31988757	31988757	+	5'Flank	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAD1	3898	broad.mit.edu	37	1	201353730	201353730	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR1	3903	broad.mit.edu	37	19	54868320	54868320	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107698409	107698409	+	Intron	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP4B	23185	broad.mit.edu	37	10	910237	910237	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAT2	7462	broad.mit.edu	37	7	73636006	73636006	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS2	26524	broad.mit.edu	37	13	21620119	21620119	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE1A	353131	broad.mit.edu	37	1	152799929	152799929	+	5'Flank	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHD	197257	broad.mit.edu	37	16	75147476	75147476	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	65895901	65895901	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55143080	55143080	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LINGO2	158038	broad.mit.edu	37	9	28150621	28150621	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPG	9388	broad.mit.edu	37	18	47113257	47113257	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMOD1	25802	broad.mit.edu	37	1	201868511	201868511	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC220729	220729	broad.mit.edu	37	3	197349298	197349298	+	Intron	SNP	A	G	G	rs150810707	by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC284009	284009	broad.mit.edu	37	17	2317650	2317650	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC284232	284232	broad.mit.edu	37	13	19426083	19426083	+	RNA	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC349196	349196	broad.mit.edu	37	8	7153786	7153786	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC441601	441601	broad.mit.edu	37	11	50252704	50252704	+	RNA	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442308	442308	broad.mit.edu	37	7	55713919	55713919	+	RNA	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC651250	651250	broad.mit.edu	37	17	66145621	66145621	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC653113	653113	broad.mit.edu	37	12	8387881	8387881	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC729234	729234	broad.mit.edu	37	2	96680879	96680879	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC729375	729375	broad.mit.edu	37	3	129821757	129821757	+	RNA	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161016486	161016486	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR5	163404	broad.mit.edu	37	1	99418635	99418635	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIT2	340745	broad.mit.edu	37	10	85984092	85984092	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141004719	141004719	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141128282	141128282	+	Frame_Shift_Del	DEL	T	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141208161	141208161	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC16B	90668	broad.mit.edu	37	14	24524177	24524177	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC32	2615	broad.mit.edu	37	11	76371885	76371885	+	Missense_Mutation	SNP	C	A	A	rs141823453		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC4C	57689	broad.mit.edu	37	11	40136961	40136961	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSP1	4046	broad.mit.edu	37	11	1874440	1874440	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP2	4053	broad.mit.edu	37	14	75022153	75022154	+	Intron	DEL	AA	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACC1	346389	broad.mit.edu	37	7	20198853	20198853	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALAT1	378938	broad.mit.edu	37	11	65267721	65267721	+	RNA	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALAT1	378938	broad.mit.edu	37	11	65271640	65271640	+	RNA	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALT1	10892	broad.mit.edu	37	18	56363658	56363658	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2A1	4124	broad.mit.edu	37	5	109090910	109090910	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2C1	4123	broad.mit.edu	37	15	75648297	75648297	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAOA	4128	broad.mit.edu	37	X	43571250	43571250	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAOA	4128	broad.mit.edu	37	X	43603416	43603416	+	Nonsense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21201536	21201536	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161510315	161510315	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K3	8491	broad.mit.edu	37	2	39553132	39553132	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK10	5602	broad.mit.edu	37	4	87080500	87080500	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	165118954	165118954	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119752160	119752160	+	3'UTR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATK	4145	broad.mit.edu	37	19	3784985	3784985	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBL2	4153	broad.mit.edu	37	10	54530406	54530406	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MC2R	4158	broad.mit.edu	37	18	13885062	13885062	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2	4168	broad.mit.edu	37	X	138678978	138678978	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM2	4171	broad.mit.edu	37	3	127335690	127335690	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDN1	23195	broad.mit.edu	37	6	90356446	90356446	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MECP2	4204	broad.mit.edu	37	X	153296370	153296370	+	Missense_Mutation	SNP	G	C	C	rs61751439		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MFN1	55669	broad.mit.edu	37	3	179096185	179096185	+	Silent	SNP	C	A	A	rs138738004	by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141759640	141759640	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141762468	141762468	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74902064	74902064	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5	4249	broad.mit.edu	37	2	135075164	135075164	+	Frame_Shift_Del	DEL	G	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGRN1	23295	broad.mit.edu	37	16	4727537	4727537	+	Silent	SNP	C	G	G	rs148776960	by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGRN1	23295	broad.mit.edu	37	16	4731568	4731568	+	Silent	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKL2	57496	broad.mit.edu	37	16	14345836	14345836	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151891258	151891259	+	Intron	DNP	GG	AT	AT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL4	9757	broad.mit.edu	37	19	36218608	36218608	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT10	8028	broad.mit.edu	37	10	22024169	22024169	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MME	4311	broad.mit.edu	37	3	154889939	154889939	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP21	118856	broad.mit.edu	37	10	127464435	127464435	+	5'Flank	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP2	4313	broad.mit.edu	37	16	55523689	55523689	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP8	4317	broad.mit.edu	37	11	102592107	102592107	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOCS1	4337	broad.mit.edu	37	6	39879821	39879821	+	Intron	DEL	C	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOGAT1	116255	broad.mit.edu	37	2	223574470	223574470	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOGAT3	346606	broad.mit.edu	37	7	100843988	100843988	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORF4	10934	broad.mit.edu	37	4	174537269	174537269	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS27	23107	broad.mit.edu	37	5	71616096	71616096	+	5'Flank	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A12	54860	broad.mit.edu	37	11	60264840	60264840	+	Missense_Mutation	SNP	C	T	T	rs138899173		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A8B	83661	broad.mit.edu	37	11	60482741	60482741	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTFR1	9650	broad.mit.edu	37	8	66606033	66606033	+	Intron	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTM1	4534	broad.mit.edu	37	X	149783175	149783175	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTM1	4534	broad.mit.edu	37	X	149787523	149787523	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR9	66036	broad.mit.edu	37	8	11166994	11166994	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	236988602	236988602	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTSS1L	92154	broad.mit.edu	37	16	70719722	70719723	+	5'UTR	DNP	GG	AA	AA			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	29599385	29599385	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9009239	9009239	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9064676	9064676	+	Silent	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX1	4599	broad.mit.edu	37	21	42807913	42807913	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3241311	3241311	+	Silent	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA8	54587	broad.mit.edu	37	1	1289872	1289872	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10243790	10243790	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH14	79784	broad.mit.edu	37	19	50796467	50796467	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10431163	10431163	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123458844	123458844	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO15A	51168	broad.mit.edu	37	17	18027746	18027746	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO15A	51168	broad.mit.edu	37	17	18057337	18057337	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1H	283446	broad.mit.edu	37	12	109853423	109853423	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26465695	26465695	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO7A	4647	broad.mit.edu	37	11	76916626	76916626	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOZ1	58529	broad.mit.edu	37	10	75399594	75399594	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69961791	69961791	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST2	11143	broad.mit.edu	37	17	47873115	47873115	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1914199	1914199	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1926808	1926808	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89883721	89883721	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALADL1	10004	broad.mit.edu	37	11	64820842	64820842	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAE1	8883	broad.mit.edu	37	16	66850922	66850922	+	Nonsense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NARS2	79731	broad.mit.edu	37	11	78152215	78152215	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78513629	78513629	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15555760	15555760	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145584925	145584925	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144816348	144816348	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM1	4684	broad.mit.edu	37	11	113102506	113102506	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPH	23397	broad.mit.edu	37	2	97007376	97007376	+	Intron	DEL	C	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54902009	54902009	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA6	23054	broad.mit.edu	37	20	33328755	33328755	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152483836	152483836	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72400950	72400950	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK6	10783	broad.mit.edu	37	9	127076195	127076195	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEURL	9148	broad.mit.edu	37	10	105350158	105350158	+	3'UTR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29672636	29672636	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFX1	4799	broad.mit.edu	37	9	33364178	33364178	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGEF	25791	broad.mit.edu	37	2	233757470	233757470	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHP2L1	4809	broad.mit.edu	37	22	42072649	42072649	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37049380	37049380	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN3	286183	broad.mit.edu	37	8	63776522	63776522	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55493644	55493644	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56373482	56373482	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NME5	8382	broad.mit.edu	37	5	137454515	137454515	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMUR2	56923	broad.mit.edu	37	5	151771875	151771875	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMUR2	56923	broad.mit.edu	37	5	151784290	151784290	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOD2	64127	broad.mit.edu	37	16	50744658	50744658	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOM1	64434	broad.mit.edu	37	7	156752721	156752721	+	Silent	SNP	C	A	A	rs143153161		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26093575	26093575	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS2	4843	broad.mit.edu	37	17	26107668	26107669	+	Intron	DNP	CC	AA	AA			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOSTRIN	115677	broad.mit.edu	37	2	169707963	169707963	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPFFR2	10886	broad.mit.edu	37	4	73013093	73013093	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP4	261734	broad.mit.edu	37	1	5964716	5964716	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHS1	4868	broad.mit.edu	37	19	36322523	36322523	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPRL2	10641	broad.mit.edu	37	3	50385143	50385143	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPSR1	387129	broad.mit.edu	37	7	34818138	34818138	+	Silent	SNP	G	T	T	rs324982	byFrequency;by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPTX1	4884	broad.mit.edu	37	17	78444626	78444626	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY5R	4889	broad.mit.edu	37	4	164271576	164271576	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY5R	4889	broad.mit.edu	37	4	164271917	164271917	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2F1	7025	broad.mit.edu	37	5	92929574	92929574	+	3'UTR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107880322	107880322	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN2	9379	broad.mit.edu	37	11	64435233	64435233	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSDHL	50814	broad.mit.edu	37	X	152018681	152018681	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	132180299	132180299	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUF2	83540	broad.mit.edu	37	1	163297242	163297242	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUMA1	4926	broad.mit.edu	37	11	71729393	71729393	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP160	23279	broad.mit.edu	37	11	47808067	47808067	+	Silent	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCM	654231	broad.mit.edu	37	7	5925612	5925612	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167489128	167489128	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167671759	167671759	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183601372	183601372	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78412990	78412990	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDH	4967	broad.mit.edu	37	7	44739898	44739898	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGT	8473	broad.mit.edu	37	X	70775975	70775975	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGT	8473	broad.mit.edu	37	X	70784726	70784726	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102269934	102269934	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML1	283298	broad.mit.edu	37	11	7530611	7530611	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPHN1	4983	broad.mit.edu	37	X	67431944	67431944	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G2	26534	broad.mit.edu	37	14	22102444	22102444	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10J1	26476	broad.mit.edu	37	1	159410315	159410315	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10T2	128360	broad.mit.edu	37	1	158368639	158368639	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10W1	81341	broad.mit.edu	37	11	58034376	58034376	+	3'UTR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1M1	125963	broad.mit.edu	37	19	9203890	9203890	+	5'Flank	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247752058	247752058	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248100033	248100033	+	5'Flank	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248186038	248186038	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M4	26245	broad.mit.edu	37	1	248402987	248402987	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059635	248059635	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K17	390436	broad.mit.edu	37	14	20586105	20586106	+	Nonsense_Mutation	DNP	GC	AA	AA			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51G2	81282	broad.mit.edu	37	11	4936463	4936463	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51V1	283111	broad.mit.edu	37	11	5221019	5221019	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52K1	390036	broad.mit.edu	37	11	4510855	4510855	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B3	441608	broad.mit.edu	37	11	58170869	58170869	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M9	390162	broad.mit.edu	37	11	56230498	56230498	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T2	219464	broad.mit.edu	37	11	55999812	55999812	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8K5	219453	broad.mit.edu	37	11	55927837	55927837	+	5'Flank	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26739101	26739101	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOP1	133060	broad.mit.edu	37	4	4198810	4198810	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVOL1	5017	broad.mit.edu	37	11	65561681	65561681	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY10	27334	broad.mit.edu	37	X	78216121	78216121	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P704P	641455	broad.mit.edu	37	14	20020047	20020047	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PABPC3	5042	broad.mit.edu	37	13	25670983	25670983	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI6	353238	broad.mit.edu	37	1	17715219	17715219	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALMD	54873	broad.mit.edu	37	1	100154432	100154432	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPLN	89932	broad.mit.edu	37	14	73717768	73717768	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPOLB	56903	broad.mit.edu	37	7	4900849	4900849	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176709310	176709310	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3B	117583	broad.mit.edu	37	2	206480498	206480499	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARD3	56288	broad.mit.edu	37	10	34671895	34671895	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP4	143	broad.mit.edu	37	13	25023800	25023800	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP4	143	broad.mit.edu	37	13	25052075	25052075	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBRM1	55193	broad.mit.edu	37	3	52610552	52610552	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBXIP1	57326	broad.mit.edu	37	1	154918707	154918707	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91137922	91137922	+	Intron	SNP	C	A	A	rs2525214		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55581628	55581628	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58299073	58299073	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140257427	140257427	+	Intron	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA4	56144	broad.mit.edu	37	5	140187200	140187200	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA9	9752	broad.mit.edu	37	5	140228043	140228043	+	5'UTR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB16	57717	broad.mit.edu	37	5	140562563	140562563	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB16	57717	broad.mit.edu	37	5	140563280	140563280	+	Missense_Mutation	SNP	T	G	G	rs145408125	byFrequency	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB16	57717	broad.mit.edu	37	5	140563490	140563490	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB16	57717	broad.mit.edu	37	5	140563649	140563649	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGC5	56097	broad.mit.edu	37	5	140871270	140871270	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNX	22990	broad.mit.edu	37	14	71513627	71513627	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1A	5136	broad.mit.edu	37	2	183095702	183095702	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31862586	31862586	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6B	5158	broad.mit.edu	37	4	654433	654433	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRB	5159	broad.mit.edu	37	5	149497145	149497145	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDK1	5163	broad.mit.edu	37	2	173429789	173429789	+	Nonsense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDPN	10630	broad.mit.edu	37	1	13940702	13940702	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD4	57595	broad.mit.edu	37	X	153095780	153095780	+	5'UTR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73440127	73440127	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER3	8863	broad.mit.edu	37	1	7890002	7890002	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58348440	58348440	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PICK1	9463	broad.mit.edu	37	22	38466962	38466962	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGN	23556	broad.mit.edu	37	18	59821710	59821710	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R4	30849	broad.mit.edu	37	3	130463531	130463549	+	Frame_Shift_Del	DEL	CTTCTGGAAGATAAGTGGG	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1C	23396	broad.mit.edu	37	19	3639073	3639073	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITRM1	10531	broad.mit.edu	37	10	3197668	3197668	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITX2	5308	broad.mit.edu	37	4	111554097	111554097	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47930059	47930059	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2	5311	broad.mit.edu	37	4	88995854	88995854	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51936893	51936893	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP1	5317	broad.mit.edu	37	1	201293685	201293685	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G16	11145	broad.mit.edu	37	11	63342429	63342429	+	Silent	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAA	9373	broad.mit.edu	37	9	26917279	26917279	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLBD2	196463	broad.mit.edu	37	12	113810346	113810346	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLBD2	196463	broad.mit.edu	37	12	113824835	113824835	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCD3	113026	broad.mit.edu	37	17	43194110	43194110	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145012371	145012371	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA6	22874	broad.mit.edu	37	1	204214839	204214839	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD1	5351	broad.mit.edu	37	1	12009871	12009871	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD3	8985	broad.mit.edu	37	7	100849495	100849495	+	3'UTR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLOD3	8985	broad.mit.edu	37	7	100853847	100853847	+	Missense_Mutation	SNP	G	A	A	rs145508748	byFrequency	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLVAP	83483	broad.mit.edu	37	19	17471268	17471269	+	Intron	DNP	CC	AA	AA			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131925827	131925827	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB3	5365	broad.mit.edu	37	X	153036561	153036561	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB3	5365	broad.mit.edu	37	X	153040878	153040878	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2L5	5383	broad.mit.edu	37	7	74312579	74312579	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118351521	118351521	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118236538	118236538	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNMA3	29944	broad.mit.edu	37	X	152226624	152226624	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLB	5423	broad.mit.edu	37	8	42199897	42199897	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLB	5423	broad.mit.edu	37	8	42199899	42199899	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1E	64425	broad.mit.edu	37	9	37492576	37492576	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3B	55703	broad.mit.edu	37	12	106831485	106831485	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PON2	5445	broad.mit.edu	37	7	95040860	95040860	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POP1	10940	broad.mit.edu	37	8	99140498	99140498	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130832264	130832264	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEG	404785	broad.mit.edu	37	14	19553590	19553590	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU5F2	134187	broad.mit.edu	37	5	93076803	93076803	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIE	10450	broad.mit.edu	37	1	40206923	40206923	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIE	10450	broad.mit.edu	37	1	40209669	40209669	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3A	5506	broad.mit.edu	37	7	113558901	113558901	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R9B	84687	broad.mit.edu	37	17	48222449	48222449	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRCD	768206	broad.mit.edu	37	17	74527227	74527227	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23521214	23521214	+	Nonsense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47305050	47305050	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIMA1	145270	broad.mit.edu	37	14	94203694	94203694	+	Silent	SNP	G	T	T	rs140716518	byFrequency	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCE	5581	broad.mit.edu	37	2	46211804	46211804	+	Missense_Mutation	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROX1	5629	broad.mit.edu	37	1	214185131	214185131	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR23A	729627	broad.mit.edu	37	3	138724774	138724774	+	Nonsense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR5L	79899	broad.mit.edu	37	11	36440898	36440899	+	Intron	DNP	GG	TT	TT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR5L	79899	broad.mit.edu	37	11	36484020	36484021	+	Frame_Shift_Ins	INS	-	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD2	84249	broad.mit.edu	37	5	139216501	139216501	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG3	5671	broad.mit.edu	37	19	43228455	43228455	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFR	5737	broad.mit.edu	37	1	78959226	78959227	+	Splice_Site	DNP	GG	TT	TT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN12	5782	broad.mit.edu	37	7	77255932	77255932	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8340574	8340574	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8465442	8465442	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157366930	157366930	+	Intron	SNP	G	A	A	rs150859028	by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRR	5801	broad.mit.edu	37	12	71054797	71054797	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40743997	40743997	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121680905	121680905	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM1	9698	broad.mit.edu	37	1	31478858	31478858	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174210776	174210776	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGEF1	27342	broad.mit.edu	37	7	66274076	66274076	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGGTB	5876	broad.mit.edu	37	1	76251902	76251902	+	5'UTR	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51L3	5892	broad.mit.edu	37	17	33434066	33434066	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD9A	5883	broad.mit.edu	37	11	67159667	67159667	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RADIL	55698	broad.mit.edu	37	7	4876112	4876112	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36594916	36594916	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANBP17	64901	broad.mit.edu	37	5	170305133	170305133	+	Silent	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRP3	25780	broad.mit.edu	37	2	33740140	33740140	+	5'UTR	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM12	10137	broad.mit.edu	37	20	34240590	34240590	+	Silent	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMX	27316	broad.mit.edu	37	X	135960062	135960062	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79349029	79349029	+	Intron	DEL	T	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384504	79384504	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103181032	103181032	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103205892	103205892	+	Missense_Mutation	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103212657	103212657	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD2	64326	broad.mit.edu	37	1	175957481	175957481	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107082943	107082943	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL1	23179	broad.mit.edu	37	1	183876181	183876181	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS12	6002	broad.mit.edu	37	4	3427249	3427249	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS4	5999	broad.mit.edu	37	1	163042551	163042551	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS6	9628	broad.mit.edu	37	14	72924983	72924983	+	Missense_Mutation	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	240986223	240986223	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104671612	104671612	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105001603	105001603	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS4	140730	broad.mit.edu	37	20	43384969	43384969	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT1	6016	broad.mit.edu	37	1	155874530	155874530	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMND5A	64795	broad.mit.edu	37	2	87376943	87376943	+	Intron	DEL	C	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF19A	25897	broad.mit.edu	37	8	101299685	101299685	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF2	6045	broad.mit.edu	37	1	185056803	185056803	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO3	64221	broad.mit.edu	37	11	124738967	124738967	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO4	54538	broad.mit.edu	37	11	124755170	124755170	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10480543	10480543	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSRC2	65117	broad.mit.edu	37	12	123005895	123005895	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTKN	6242	broad.mit.edu	37	2	74655631	74655631	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUFY3	22902	broad.mit.edu	37	4	71655362	71655362	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237580479	237580479	+	Intron	SNP	G	T	T	rs142393787	by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237813270	237813270	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33926924	33926924	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23907731	23907731	+	Silent	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134988743	134988743	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH1	23328	broad.mit.edu	37	6	148664387	148664387	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH3	54440	broad.mit.edu	37	X	128925116	128925116	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASH3	54440	broad.mit.edu	37	X	128926692	128926692	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCHIP1	29970	broad.mit.edu	37	3	159603965	159603965	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166165116	166165116	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN2A	6326	broad.mit.edu	37	2	166243334	166243334	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN8A	6334	broad.mit.edu	37	12	52200170	52200170	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNM1	79005	broad.mit.edu	37	1	151139642	151139642	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNN1G	6340	broad.mit.edu	37	16	23223352	23223352	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG1	9147	broad.mit.edu	37	14	50252225	50252225	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4008919	4008919	+	Missense_Mutation	SNP	G	T	T	rs144938504		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L3	266629	broad.mit.edu	37	22	30866229	30866229	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6D	80031	broad.mit.edu	37	15	48057281	48057281	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT2	4735	broad.mit.edu	37	2	242276804	242276804	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA3	12	broad.mit.edu	37	14	95088697	95088697	+	Missense_Mutation	SNP	C	G	G	rs144438452		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA5	5104	broad.mit.edu	37	14	95053860	95053861	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB8	5271	broad.mit.edu	37	18	61653531	61653531	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETD2	29072	broad.mit.edu	37	3	47158149	47158149	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB1	9869	broad.mit.edu	37	1	150935079	150935079	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7214469	7214469	+	Silent	SNP	C	A	A	rs145957081	byFrequency	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCZ	137868	broad.mit.edu	37	8	14412147	14412147	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3BP2	6452	broad.mit.edu	37	4	2831101	2831101	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK3	85358	broad.mit.edu	37	22	51160429	51160429	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC1	6464	broad.mit.edu	37	1	154937911	154937911	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIK1	150094	broad.mit.edu	37	21	44841777	44841777	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232629521	232629521	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIX2	10736	broad.mit.edu	37	2	45235621	45235621	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48524927	48524927	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A5	57468	broad.mit.edu	37	20	44683562	44683562	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC14A2	8170	broad.mit.edu	37	18	43223048	43223048	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A2	6565	broad.mit.edu	37	3	121634151	121634151	+	Silent	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A3	51296	broad.mit.edu	37	11	60711180	60711180	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A39	51629	broad.mit.edu	37	17	42399990	42399990	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A11	201266	broad.mit.edu	37	17	70845835	70845835	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18280026	18280026	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC43A3	29015	broad.mit.edu	37	11	57191345	57191345	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A6	8884	broad.mit.edu	37	2	27425804	27425804	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10953680	10953680	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A7	6534	broad.mit.edu	37	5	149580543	149580543	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A3	84889	broad.mit.edu	37	X	70147910	70147910	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A1	6546	broad.mit.edu	37	2	40655792	40655792	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A2	6549	broad.mit.edu	37	2	103274403	103274403	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A6	10479	broad.mit.edu	37	X	135115741	135115741	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98923246	98923246	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168175165	168175166	+	Intron	DNP	CC	AA	AA			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK1	114798	broad.mit.edu	37	13	84455381	84455381	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA1	6594	broad.mit.edu	37	X	128633819	128633819	+	Splice_Site	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC2	64094	broad.mit.edu	37	6	168999493	168999493	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNHG10	283596	broad.mit.edu	37	14	95999655	95999655	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-10	100033447	broad.mit.edu	37	15	25432519	25432519	+	5'Flank	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25458686	25458687	+	Intron	DNP	GC	TT	TT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25318215	25318215	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25326347	25326347	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25331639	25331639	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96953686	96953686	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51449417	51449417	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51621420	51621420	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108427477	108427477	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121429318	121429318	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16071447	16071447	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP6	80320	broad.mit.edu	37	17	45924888	45924888	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAST	6683	broad.mit.edu	37	2	32289037	32289037	+	Missense_Mutation	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA19	219938	broad.mit.edu	37	11	133715206	133715206	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE1	285955	broad.mit.edu	37	7	44047193	44047193	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG11	80208	broad.mit.edu	37	15	44876526	44876526	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIRE2	84501	broad.mit.edu	37	16	89911694	89911694	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK3	50859	broad.mit.edu	37	4	167663162	167663163	+	Frame_Shift_Ins	INS	-	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55648306	55648306	+	5'Flank	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55657566	55657566	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158647689	158647689	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN5	51332	broad.mit.edu	37	15	42145032	42145032	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65266574	65266574	+	Nonsense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRT	51593	broad.mit.edu	37	7	100481571	100481571	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX1	6756	broad.mit.edu	37	X	48117896	48117896	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130064465	130064465	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53038615	53038615	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104100609	104100609	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP1	26228	broad.mit.edu	37	4	68442798	68442798	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33741717	33741717	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT1	6772	broad.mit.edu	37	2	191847322	191847322	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STEAP1	26872	broad.mit.edu	37	7	89793755	89793755	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX8	9482	broad.mit.edu	37	17	9281903	9281903	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUN3	256979	broad.mit.edu	37	7	48026922	48026922	+	3'UTR	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUV420H1	51111	broad.mit.edu	37	11	67941343	67941343	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT4	6860	broad.mit.edu	37	18	40854041	40854041	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAAR5	9038	broad.mit.edu	37	6	132909856	132909856	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TANC2	26115	broad.mit.edu	37	17	61432309	61432309	+	Frame_Shift_Del	DEL	G	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARBP1	6894	broad.mit.edu	37	1	234599596	234599596	+	Silent	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARSL2	123283	broad.mit.edu	37	15	102242330	102242330	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TASP1	55617	broad.mit.edu	37	20	13415674	13415674	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D16	125058	broad.mit.edu	37	17	77921563	77921563	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D21	161514	broad.mit.edu	37	15	74173960	74173960	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBL1XR1	79718	broad.mit.edu	37	3	176771667	176771667	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX3	6926	broad.mit.edu	37	12	115111974	115111974	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA3	6920	broad.mit.edu	37	1	23751185	23751185	+	5'UTR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	52901671	52901671	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56642232	56642232	+	Missense_Mutation	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133931800	133931800	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11500226	11500226	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11501699	11501699	+	Missense_Mutation	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIGIT	201633	broad.mit.edu	37	3	114026903	114026903	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM9SF2	9375	broad.mit.edu	37	13	100204634	100204634	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM123	114908	broad.mit.edu	37	11	102269667	102269667	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM131	23505	broad.mit.edu	37	2	98382518	98382518	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	129822193	129822193	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM204	79652	broad.mit.edu	37	16	1604883	1604883	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMLHE	55217	broad.mit.edu	37	X	154754316	154754316	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117810411	117810411	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175335155	175335155	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32024798	32024798	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7577538	7577538	+	Missense_Mutation	SNP	C	G	G	rs11540652		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPR	7175	broad.mit.edu	37	1	186287787	186287787	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10996050	10996050	+	RNA	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM16	10626	broad.mit.edu	37	17	15539485	15539485	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM24	8805	broad.mit.edu	37	7	138235802	138235802	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM29	23650	broad.mit.edu	37	11	119993598	119993598	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM41	90933	broad.mit.edu	37	5	180659677	180659677	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM42	287015	broad.mit.edu	37	3	140406710	140406710	+	Missense_Mutation	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM49	57093	broad.mit.edu	37	11	89537745	89537745	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM72	493829	broad.mit.edu	37	16	31230697	31230697	+	Missense_Mutation	SNP	C	A	A	rs115885262	byFrequency;by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189065202	189065202	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML2	205860	broad.mit.edu	37	4	189012595	189012595	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML2	205860	broad.mit.edu	37	4	189013140	189013140	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230655921	230655921	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230663565	230663565	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4AP	26133	broad.mit.edu	37	20	33591144	33591144	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73736094	73736094	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142626676	142626676	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC2	7249	broad.mit.edu	37	16	2126413	2126413	+	Intron	DEL	G	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAX	7257	broad.mit.edu	37	1	231672975	231672975	+	Silent	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN10	83882	broad.mit.edu	37	17	79611987	79611987	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSSK1B	83942	broad.mit.edu	37	5	112769842	112769842	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC18	118491	broad.mit.edu	37	10	75072314	75072314	+	Nonsense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7A	57217	broad.mit.edu	37	2	47287847	47287847	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7B	145567	broad.mit.edu	37	14	91076937	91076937	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179584212	179584212	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA4B	80086	broad.mit.edu	37	2	220136344	220136344	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXLNG	55787	broad.mit.edu	37	X	16859727	16859727	+	Silent	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC16	57544	broad.mit.edu	37	14	52923870	52923870	+	Silent	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN1	29979	broad.mit.edu	37	9	86278912	86278912	+	Nonsense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A1	133688	broad.mit.edu	37	5	35954378	35954378	+	Missense_Mutation	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UHRF1BP1	54887	broad.mit.edu	37	6	34824242	34824242	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96106091	96106091	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP28	57646	broad.mit.edu	37	11	113700007	113700007	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP29	57663	broad.mit.edu	37	19	57640890	57640890	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP20	27340	broad.mit.edu	37	12	101682691	101682691	+	Intron	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	54171237	54171237	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	91738572	91738572	+	IGR	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	94968123	94968124	+	IGR	DNP	CG	AT	AT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	107047178	107047178	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	107607089	107607089	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	27911423	27911423	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49860988	49860988	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51451549	51451549	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55086447	55086447	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56216743	56216743	+	IGR	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56267959	56267959	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56268640	56268640	+	IGR	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59665942	59665942	+	IGR	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	93343527	93343527	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	127829101	127829101	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	17536619	17536619	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	58361464	58361464	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	79187559	79187560	+	IGR	DNP	GG	TT	TT			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19240169	19240169	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19466332	19466332	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19941382	19941382	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	28681755	28681755	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68406541	68406542	+	IGR	DNP	CC	AA	AA			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	86928992	86928992	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22070422	22070422	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	78526476	78526476	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95098192	95098192	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22692634	22692634	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	78191570	78191570	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	16457549	16457549	+	IGR	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	31963682	31963682	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32626230	32626230	+	IGR	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33380213	33380213	+	IGR	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33504445	33504445	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	46660307	46660307	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20417976	20417976	+	IGR	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20488832	20488832	+	IGR	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26073019	26073019	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	30433320	30433320	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	12913226	12913226	+	IGR	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14377758	14377758	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14377777	14377777	+	IGR	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	15165492	15165493	+	IGR	INS	-	G	G	rs144342111	by1000genomes	TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	26232460	26232460	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57677534	57677534	+	IGR	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	29282530	29282530	+	IGR	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	53762906	53762906	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	54179179	54179179	+	IGR	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	55033189	55033189	+	IGR	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	102252120	102252120	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106435381	106435381	+	IGR	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	109045369	109045369	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149096494	149096494	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	175014813	175014813	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	199878699	199878699	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	237144961	237144961	+	IGR	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248605049	248605049	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79215056	79215056	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79520809	79520809	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10329938	10329938	+	IGR	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10329976	10329976	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	29992697	29992697	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	6181891	6181891	+	IGR	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10862436	10862436	+	IGR	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14743855	14743855	+	IGR	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14757386	14757386	+	IGR	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	28515680	28515680	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31859376	31859376	+	IGR	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	31913838	31913838	+	IGR	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	40899621	40899621	+	IGR	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16123295	16123295	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16350349	16350349	+	IGR	SNP	G	T	T	rs5771427		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	21421809	21421809	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	129276242	129276242	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131051810	131051810	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132361717	132361717	+	IGR	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132381544	132381544	+	IGR	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132384203	132384203	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	139170577	139170577	+	IGR	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	183936772	183936772	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	20355609	20355609	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	204180263	204180263	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	233306830	233306830	+	IGR	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	63979302	63979302	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	145402569	145402569	+	IGR	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	163719501	163719501	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	172546954	172546954	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	76484533	76484533	+	IGR	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97916141	97916141	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	11374180	11374180	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	115748910	115748910	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	116064333	116064333	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	116841937	116841937	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	28825598	28825598	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	43412090	43412090	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	78909596	78909596	+	IGR	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	8983184	8983184	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9232104	9232104	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9699654	9699654	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	116051885	116051885	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	14652409	14652409	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	14652435	14652436	+	IGR	DNP	GG	AA	AA			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	174345421	174345421	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23304298	23304298	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	84845786	84845786	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	112683175	112683175	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27236858	27236858	+	IGR	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27529327	27529327	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	73308593	73308593	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	80776990	80776990	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	10491867	10491867	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	138126925	138126925	+	IGR	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	138126927	138126927	+	IGR	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	143874165	143874165	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	145281394	145281394	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63466115	63466115	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9767366	9767366	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	138710540	138710540	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	27610221	27610221	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	6279076	6279076	+	IGR	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	6675494	6675494	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68427990	68427990	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68438383	68438383	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	7733088	7733088	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84673016	84673016	+	IGR	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	100792869	100792869	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	101034658	101034658	+	IGR	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108811892	108811892	+	IGR	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134599319	134599320	+	IGR	DNP	CC	AA	AA			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	144712120	144712120	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	148890385	148890385	+	IGR	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	153834085	153834085	+	IGR	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48300716	48300716	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48634506	48634506	+	IGR	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	58012005	58012005	+	IGR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79828000	79828000	+	IGR	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	84010082	84010082	+	IGR	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92644415	92644415	+	IGR	SNP	T	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13537389	13537389	+	IGR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VARS	7407	broad.mit.edu	37	6	31747922	31747922	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV1	7409	broad.mit.edu	37	19	6828390	6828390	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82833774	82833774	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIM	7431	broad.mit.edu	37	10	17278279	17278279	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79853290	79853290	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6131424	6131424	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110456313	110456313	+	Intron	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR49	151790	broad.mit.edu	37	3	167246840	167246840	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR66	144406	broad.mit.edu	37	12	122413047	122413047	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR69	164781	broad.mit.edu	37	2	228786324	228786324	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WISP1	8840	broad.mit.edu	37	8	134239843	134239843	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XAF1	54739	broad.mit.edu	37	17	6673927	6673927	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168106765	168106765	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR6	286046	broad.mit.edu	37	8	10782087	10782087	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC6	2547	broad.mit.edu	37	22	42032775	42032775	+	Splice_Site	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17211895	17211895	+	Intron	SNP	G	T	T	rs3947375		TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17221490	17221490	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YBX2	51087	broad.mit.edu	37	17	7193932	7193932	+	Intron	DEL	C	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100349490	100349490	+	Missense_Mutation	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBBX	79740	broad.mit.edu	37	3	167078554	167078554	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB20	26137	broad.mit.edu	37	3	114069085	114069085	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB7B	51043	broad.mit.edu	37	1	154988888	154988888	+	Silent	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HC1	51530	broad.mit.edu	37	7	129690962	129690962	+	Intron	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC9	51114	broad.mit.edu	37	X	128940160	128940160	+	3'UTR	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31809437	31809437	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE26	23503	broad.mit.edu	37	14	68219064	68219064	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM3	9203	broad.mit.edu	37	X	70470204	70470204	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF121	7675	broad.mit.edu	37	19	9677224	9677224	+	Nonsense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF17	7565	broad.mit.edu	37	19	57931868	57931868	+	Silent	SNP	G	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF256	10172	broad.mit.edu	37	19	58455524	58455524	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF257	113835	broad.mit.edu	37	19	22257929	22257929	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF25	219749	broad.mit.edu	37	10	38246178	38246178	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF274	10782	broad.mit.edu	37	19	58721323	58721323	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280C	55609	broad.mit.edu	37	X	129339490	129339490	+	Intron	SNP	T	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF300	91975	broad.mit.edu	37	5	150275752	150275752	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF33A	7581	broad.mit.edu	37	10	38306370	38306370	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354C	30832	broad.mit.edu	37	5	178506304	178506304	+	Silent	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF395	55893	broad.mit.edu	37	8	28206278	28206278	+	Silent	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF460	10794	broad.mit.edu	37	19	57803657	57803657	+	3'UTR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF485	220992	broad.mit.edu	37	10	44104250	44104250	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF516	9658	broad.mit.edu	37	18	74091436	74091436	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF518A	9849	broad.mit.edu	37	10	97920261	97920261	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF524	147807	broad.mit.edu	37	19	56114114	56114114	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF573	126231	broad.mit.edu	37	19	38287028	38287028	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF638	27332	broad.mit.edu	37	2	71632683	71632683	+	Intron	SNP	A	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF644	84146	broad.mit.edu	37	1	91382454	91382454	+	Silent	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF677	342926	broad.mit.edu	37	19	53746912	53746912	+	Intron	SNP	G	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57528933	57528933	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF75D	7626	broad.mit.edu	37	X	134421782	134421782	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF761	388561	broad.mit.edu	37	19	53957975	53957975	+	Missense_Mutation	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF808	388558	broad.mit.edu	37	19	53057530	53057530	+	Missense_Mutation	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF827	152485	broad.mit.edu	37	4	146744700	146744700	+	Intron	SNP	A	C	C			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF827	152485	broad.mit.edu	37	4	146823533	146823533	+	Missense_Mutation	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF90	7643	broad.mit.edu	37	19	20191046	20191046	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF98	148198	broad.mit.edu	37	19	22586103	22586103	+	Intron	DEL	A	-	-			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNRF1	84937	broad.mit.edu	37	16	75127341	75127341	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB3	84083	broad.mit.edu	37	2	136269205	136269205	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58549360	58549360	+	Silent	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5A	79149	broad.mit.edu	37	19	56854607	56854607	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZW10	9183	broad.mit.edu	37	11	113614613	113614613	+	Missense_Mutation	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80752535	80752535	+	5'UTR	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22251572	22251572	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22581010	22581010	+	Intron	SNP	C	G	G			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102303160	102303160	+	5'Flank	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22473238	22473238	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	159402413	159402413	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	28793082	28793082	+	Intron	SNP	G	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133074956	133074956	+	Intron	SNP	C	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89890469	89890469	+	5'Flank	SNP	A	T	T			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180546777	180546777	+	Intron	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	10214165	10214165	+	5'Flank	SNP	C	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142045394	142045394	+	Intron	SNP	T	A	A			TCGA-73-4666-01A-01D-1265-08	TCGA-73-4666-11A-01D-1265-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
