Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	TTotCov	TVarCov	NTotCov	NVarCov	Trna_tot	Trna_ref	Trna_var	Trna_alt1	Trna_alt2
EPHA8	2046	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	22902757	22902757	+	Silent	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	234	51	301	0	0	0	0	0	0
SRRM1	10250	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	24981475	24981475	+	Silent	SNP	T	T	C	rs199715936		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	102	21	111	0	12	8	4	0	0
ERI3	79033	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	44778900	44778900	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	113	27	139	0	0	0	0	0	0
KCNN3	3782	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	154680665	154680665	+	Silent	SNP	C	C	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	111	31	146	0	0	0	0	0	0
PKLR	5313	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	155262969	155262969	+	Missense_Mutation	SNP	G	G	A	rs201406712		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	199	48	259	0	0	0	0	0	0
CR2	1380	bcgsc.ca	37	1	207642240	207642240	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	76	5	84	0	0	0	0	0	0
PFKP	5214	ucsc.edu;bcgsc.ca	37	10	3143674	3143674	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	37	7	76	0	39	12	27	0	0
CSGALNACT2	55454	broad.mit.edu	37	10	43659419	43659419	+	Missense_Mutation	SNP	G	G	T	rs79064394		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	188	4	182	1	5	5	0	0	0
WDFY4	57705	broad.mit.edu	37	10	49998834	49998834	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	240	14	263	19	0	0	0	0	0
PCDH15	65217	broad.mit.edu	37	10	55581933	55581933	+	Silent	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	129	5	152	0	0	0	0	0	0
ADD3	120	broad.mit.edu	37	10	111878371	111878371	+	Silent	SNP	G	G	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	132	3	136	1	1	1	0	0	0
USP47	55031	broad.mit.edu	37	11	11941997	11941997	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	76	4	84	1	3	3	0	0	0
PGR	5241	broad.mit.edu	37	11	100999350	100999350	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	6	2	24	0	0	0	0	0	0
ERC1	23085	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	1372211	1372211	+	Silent	SNP	T	T	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	52	9	80	0	0	0	0	0	0
DDX12P	440081	broad.mit.edu	37	12	9572801	9572801	+	RNA	SNP	C	C	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	63	6	61	0	0	0	0	0	0
RND1	27289	broad.mit.edu;bcgsc.ca	37	12	49259443	49259443	+	Silent	SNP	A	A	G	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	71	6	104	1	0	0	0	0	0
GALNT6	11226	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	51757995	51757995	+	Missense_Mutation	SNP	C	C	G	rs138580901	byfrequency;alternate_allele	TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	237	52	307	0	1	1	0	0	0
ESPL1	9700	broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	53663722	53663722	+	Silent	SNP	A	A	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	289	73	309	2	0	0	0	0	0
HECTD4	283450	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	112605266	112605266	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	89	23	93	0	1	0	1	0	0
TMEM132C	92293	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	129180556	129180556	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	128	30	128	0	0	0	0	0	0
MTUS2	23281	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	29675028	29675028	+	Silent	SNP	C	C	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	71	18	62	0	0	0	0	0	0
TRIP4	9325	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	64702014	64702014	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	45	15	44	0	0	0	0	0	0
DNAH2	146754	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	7734797	7734797	+	Silent	SNP	C	C	G	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	133	33	138	0	1	1	0	0	0
PIPOX	51268	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	27379969	27379969	+	Missense_Mutation	SNP	G	G	C	rs58011977	byfrequency;alternate_allele	TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	165	22	148	0	0	0	0	0	0
LOC440434	0	bcgsc.ca	37	17	36398142	36398142	+	RNA	SNP	T	T	A	rs138180351		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	871	30	567	11	83	41	41	1	0
NACA2	342538	ucsc.edu	37	17	59668146	59668146	+	Silent	SNP	A	A	G	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	271	1	221	0	0	0	0	0	0
CETN1	1068	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	18	580595	580595	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	83	25	89	0	0	0	0	0	0
PAF1	54623	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	39879309	39879309	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	254	46	307	0	0	0	0	0	0
SPTBN4	57731	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	41063170	41063170	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	38	8	84	0	2	0	2	0	0
NLRP11	204801	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	19	56320200	56320200	+	Missense_Mutation	SNP	C	C	G	rs16986626	byfrequency;alternate_allele	TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	138	31	128	0	0	0	0	0	0
LOC442028	0	ucsc.edu	37	2	95539132	95539132	+	RNA	SNP	A	A	G	rs74376788		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	35	5	32	1	7	0	7	0	0
SCN2A	6326	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	166246020	166246020	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	205	39	212	0	7	7	0	0	0
LRP2	4036	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	170003429	170003429	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	195	42	200	0	18	0	18	0	0
CIR1	9541	ucsc.edu	37	2	175213722	175213722	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	38	1	28	0	9	9	0	0	0
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	179473456	179473456	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	103	24	120	0	1	1	0	0	0
ITGAV	3685	broad.mit.edu	37	2	187506267	187506267	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	141	3	160	0	1	1	0	0	0
ASIP	434	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	20	32856797	32856797	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	39	8	81	0	0	0	0	0	0
APOBEC3G	60489	broad.mit.edu	37	22	39479787	39479787	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	152	5	140	0	10	10	0	0	0
NSUN3	63899	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	93845254	93845254	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	173	19	185	0	8	6	2	0	0
MYLK	4638	broad.mit.edu	37	3	123333078	123333078	+	Silent	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	140	4	199	0	17	17	0	0	0
F12	2161	broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	176831349	176831349	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	34	6	72	0	7	3	4	0	0
DNAH8	1769	broad.mit.edu	37	6	38781879	38781879	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	118	5	130	0	0	0	0	0	0
SNX3	8724	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	108533371	108533371	+	Silent	SNP	A	A	C	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	112	21	137	1	87	49	38	0	0
LPA	4018	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	161071428	161071428	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	125	27	167	2	0	0	0	0	0
IQCE	23288	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	2645529	2645529	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	53	8	160	0	1	0	1	0	0
C7orf26	79034	broad.mit.edu	37	7	6630101	6630101	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	7	2	56	0	0	0	0	0	0
POM121	9883	broad.mit.edu	37	7	72412500	72412500	+	Missense_Mutation	SNP	A	A	C	rs62465074		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	295	12	278	10	10	10	0	0	0
POM121C	100101267	broad.mit.edu	37	7	75050987	75050987	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	231	23	396	1	6	1	5	0	0
PCLO	27445	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	82544315	82544315	+	Silent	SNP	A	A	G	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	199	56	176	0	3	2	1	0	0
TTI2	80185	broad.mit.edu	37	8	33369822	33369822	+	Missense_Mutation	SNP	C	C	T	rs199724020		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	88	3	71	0	4	4	0	0	0
KIAA0146	23514	broad.mit.edu	37	8	48626065	48626065	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	142	4	136	1	6	6	0	0	0
NDUFB6	4712	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	32571048	32571048	+	Silent	SNP	G	G	T	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	130	28	147	0	0	0	0	0	0
SECISBP2	79048	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	91964729	91964729	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	179	31	192	0	18	9	9	0	0
CIZ1	25792	broad.mit.edu	37	9	130952718	130952718	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	48	11	43	5	0	0	0	0	0
ZFX	7543	broad.mit.edu	37	X	24197627	24197627	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	450	8	495	0	0	0	0	0	0
MAGEB2	4113	broad.mit.edu;bcgsc.ca	37	X	30237276	30237276	+	Silent	SNP	C	C	G	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	84	21	93	1	0	0	0	0	0
TRO	7216	ucsc.edu;bcgsc.ca	37	X	54957701	54957701	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	268	30	281	2	23	23	0	0	0
SULT1C4	27233	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	109003803	109003804	+	Frame_Shift_Ins	INS	-	-	CA	novel		TCGA-B1-A47O-01A-11D-A25F-10	TCGA-B1-A47O-10A-01D-A25F-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ca2b9fe2-97e0-4d4f-afd7-a5acf638800f	c023a62c-e498-4e1e-be91-99cf6d7b0708	124	25	116	0	0	0	0	0	0
