Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A1BG	1	broad.mit.edu	37	19	58864328	58864328	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7383019	7383019	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7721569	7721569	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67189378	67189378	+	Silent	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA12	26154	broad.mit.edu	37	2	215890417	215890417	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA5	23461	broad.mit.edu	37	17	67303002	67303002	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66871472	66871472	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB11	8647	broad.mit.edu	37	2	169792946	169792946	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20721275	20721275	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB8	11194	broad.mit.edu	37	7	150741345	150741345	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183699470	183699470	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG8	64241	broad.mit.edu	37	2	44080051	44080051	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD8	79575	broad.mit.edu	37	19	17411939	17411939	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3BP	25890	broad.mit.edu	37	3	100523794	100523794	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3	51225	broad.mit.edu	37	17	47293928	47293928	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABL2	27	broad.mit.edu	37	1	179087719	179087719	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35512711	35512711	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD11	84129	broad.mit.edu	37	3	132337647	132337647	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD9	28976	broad.mit.edu	37	3	128598334	128598334	+	5'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAP3	116983	broad.mit.edu	37	1	1231132	1231132	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	31416022	31416022	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCS	84680	broad.mit.edu	37	11	44105128	44105128	+	Splice_Site	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOX2	8309	broad.mit.edu	37	3	58514509	58514509	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOXL	55289	broad.mit.edu	37	2	111559375	111559375	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTN2	88	broad.mit.edu	37	1	236889399	236889399	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR2B	93	broad.mit.edu	37	3	38519472	38519472	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM11	4185	broad.mit.edu	37	17	42855137	42855137	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM11	4185	broad.mit.edu	37	17	42855212	42855212	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	128018971	128018971	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM33	80332	broad.mit.edu	37	20	3652837	3652837	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106054263	106054263	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106188212	106188212	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106494610	106494610	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106746158	106746158	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106805158	106805158	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106993725	106993725	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107042821	107042821	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107042935	107042935	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107136627	107136627	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM7	8756	broad.mit.edu	37	8	24339838	24339838	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33751438	33751438	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS2	9509	broad.mit.edu	37	5	178700128	178700128	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64506370	64506370	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7520894	7520894	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7757550	7757550	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100208120	100208120	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L1	134265	broad.mit.edu	37	5	148709278	148709278	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L1	134265	broad.mit.edu	37	5	148715350	148715350	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFTPH	54812	broad.mit.edu	37	2	64778627	64778627	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGAP1	116987	broad.mit.edu	37	2	237029159	237029159	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGK	55750	broad.mit.edu	37	7	141301115	141301115	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGK	55750	broad.mit.edu	37	7	141352626	141352626	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT9	84803	broad.mit.edu	37	4	84509320	84509320	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPS	8540	broad.mit.edu	37	2	178307022	178307022	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK	79026	broad.mit.edu	37	11	62288697	62288697	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AICDA	57379	broad.mit.edu	37	12	8765449	8765449	+	5'Flank	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129270750	129270750	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1L	55057	broad.mit.edu	37	1	26672469	26672469	+	5'Flank	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP3	10566	broad.mit.edu	37	12	4737560	4737560	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKD1	221264	broad.mit.edu	37	6	109954510	109954510	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1C2	1646	broad.mit.edu	37	10	5045733	5045733	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1C4	1109	broad.mit.edu	37	10	5242256	5242256	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1E2	83592	broad.mit.edu	37	10	4879575	4879575	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10	84920	broad.mit.edu	37	12	34176900	34176900	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG10	84920	broad.mit.edu	37	12	34179422	34179422	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56165371	56165371	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALS2CL	259173	broad.mit.edu	37	3	46719923	46719923	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMY2B	280	broad.mit.edu	37	1	104114861	104114861	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK3	288	broad.mit.edu	37	10	61822847	61822847	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFN1	162282	broad.mit.edu	37	17	54535094	54535094	+	Intron	SNP	G	T	T	rs114210470	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKMY1	51281	broad.mit.edu	37	2	241494191	241494191	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD13A	88455	broad.mit.edu	37	12	110463653	110463653	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD26	22852	broad.mit.edu	37	10	27306526	27306526	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37451564	37451564	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37508354	37508354	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14799008	14799008	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD36B	57730	broad.mit.edu	37	2	98175325	98175325	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD36B	57730	broad.mit.edu	37	2	98175380	98175380	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD36B	57730	broad.mit.edu	37	2	98177269	98177269	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD36	375248	broad.mit.edu	37	2	97779728	97779728	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD50	57182	broad.mit.edu	37	4	125592087	125592087	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD7	56311	broad.mit.edu	37	7	117874821	117874821	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD7	56311	broad.mit.edu	37	7	117874823	117874823	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKS1B	56899	broad.mit.edu	37	12	99898273	99898273	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101520766	101520766	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO5	203859	broad.mit.edu	37	11	22292025	22292025	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOAH	313	broad.mit.edu	37	7	36616175	36616175	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOC2	314	broad.mit.edu	37	17	40997147	40997147	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP3B2	8120	broad.mit.edu	37	15	83328316	83328316	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLF	200558	broad.mit.edu	37	2	68753906	68753906	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21234901	21234901	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APPBP2	10513	broad.mit.edu	37	17	58539393	58539393	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115351522	115351522	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGEF1	10565	broad.mit.edu	37	8	68208889	68208889	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGEF2	10564	broad.mit.edu	37	20	47626980	47626980	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP15	55843	broad.mit.edu	37	2	143959823	143959823	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP28	79822	broad.mit.edu	37	18	6882188	6882188	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11315279	11315279	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF15	22899	broad.mit.edu	37	17	8222414	8222414	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1B	57492	broad.mit.edu	37	6	157528151	157528152	+	Frame_Shift_Ins	INS	-	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC7	79637	broad.mit.edu	37	17	73106466	73106466	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPC2	10109	broad.mit.edu	37	2	219099135	219099135	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARPP21	10777	broad.mit.edu	37	3	35785456	35785456	+	Silent	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRB1	408	broad.mit.edu	37	11	75001026	75001026	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AR	367	broad.mit.edu	37	X	66941637	66941637	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB13	79754	broad.mit.edu	37	10	5693200	5693200	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB17	127247	broad.mit.edu	37	1	76398013	76398013	+	5'UTR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB3	51130	broad.mit.edu	37	2	53927317	53927317	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB9	140462	broad.mit.edu	37	X	15266879	15266879	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPH	444	broad.mit.edu	37	8	62538884	62538884	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197091598	197091598	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPSCR1	79058	broad.mit.edu	37	17	79937133	79937133	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN1	460	broad.mit.edu	37	1	176845691	176845691	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL2	55252	broad.mit.edu	37	2	25991576	25991576	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2B	54454	broad.mit.edu	37	2	23977766	23977766	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2	29028	broad.mit.edu	37	8	124413410	124413410	+	RNA	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATE1	11101	broad.mit.edu	37	10	123596233	123596233	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATF6	22926	broad.mit.edu	37	1	161821408	161821408	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG7	10533	broad.mit.edu	37	3	11372738	11372738	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG9A	79065	broad.mit.edu	37	2	220085430	220085430	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47574327	47574327	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP11A	23250	broad.mit.edu	37	13	113530300	113530300	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A3	478	broad.mit.edu	37	19	42489545	42489545	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP5C1	509	broad.mit.edu	37	10	7830195	7830195	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A4	50617	broad.mit.edu	37	7	138413517	138413517	+	Missense_Mutation	SNP	G	A	A	rs150175783	byFrequency	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V0A4	50617	broad.mit.edu	37	7	138417828	138417828	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1C2	245973	broad.mit.edu	37	2	10904613	10904613	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1H	51606	broad.mit.edu	37	8	54708072	54708072	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7A	538	broad.mit.edu	37	X	77243647	77243647	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9B	374868	broad.mit.edu	37	18	77090116	77090116	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142186745	142186745	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATR	545	broad.mit.edu	37	3	142188288	142188288	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AVPR2	554	broad.mit.edu	37	X	153171941	153171941	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GNT1	11041	broad.mit.edu	37	11	66114003	66114003	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT4	338707	broad.mit.edu	37	11	373573	373573	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAAT	570	broad.mit.edu	37	9	104124958	104124958	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACE1	23621	broad.mit.edu	37	11	117163902	117163902	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI2	576	broad.mit.edu	37	1	32204348	32204348	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L1	84726	broad.mit.edu	37	9	134312224	134312224	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT5	7920	broad.mit.edu	37	6	31656113	31656113	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160240093	160240093	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS12	166379	broad.mit.edu	37	4	123664621	123664621	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEST4	266675	broad.mit.edu	37	1	45250730	45250730	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51695872	51695872	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMI1	648	broad.mit.edu	37	10	22615511	22615511	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPTF	2186	broad.mit.edu	37	17	65822303	65822303	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA1	672	broad.mit.edu	37	17	41243499	41243499	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRF1	2972	broad.mit.edu	37	14	105695289	105695289	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRS3	680	broad.mit.edu	37	X	135572294	135572294	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79973080	79973080	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD11	121551	broad.mit.edu	37	12	108010866	108010866	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTNL3	10917	broad.mit.edu	37	5	180419860	180419860	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf68	79741	broad.mit.edu	37	10	33093962	33093962	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf90	118611	broad.mit.edu	37	10	128153107	128153107	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf30	56946	broad.mit.edu	37	11	76248926	76248926	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf63	79864	broad.mit.edu	37	11	122805659	122805659	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf12	196477	broad.mit.edu	37	12	91348087	91348087	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf26	84190	broad.mit.edu	37	12	82783570	82783570	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf40	283461	broad.mit.edu	37	12	40078650	40078650	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf28	122258	broad.mit.edu	37	13	113086810	113086810	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf102	55051	broad.mit.edu	37	14	90764712	90764712	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf135	64430	broad.mit.edu	37	14	60592584	60592584	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf145	145508	broad.mit.edu	37	14	81251424	81251424	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf23	90417	broad.mit.edu	37	15	40678797	40678797	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf32	145858	broad.mit.edu	37	15	93016280	93016280	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36910351	36910351	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36983294	36983294	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf82	162083	broad.mit.edu	37	16	27078357	27078357	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf101	257044	broad.mit.edu	37	1	244716057	244716057	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf49	84066	broad.mit.edu	37	1	178489525	178489525	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf59	113802	broad.mit.edu	37	1	109191437	109191437	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf177	63939	broad.mit.edu	37	20	58519045	58519045	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31671171	31671171	+	Splice_Site	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf24	55969	broad.mit.edu	37	20	35238192	35238192	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf26	26074	broad.mit.edu	37	20	20234278	20234278	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf85	128602	broad.mit.edu	37	20	56735845	56735845	+	Silent	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf28	51493	broad.mit.edu	37	22	32792114	32792114	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf16	84226	broad.mit.edu	37	2	27803250	27803250	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf16	84226	broad.mit.edu	37	2	27805001	27805001	+	Silent	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf66	401027	broad.mit.edu	37	2	197673871	197673871	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf77	129881	broad.mit.edu	37	2	170506009	170506009	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf32	51066	broad.mit.edu	37	3	8673789	8673789	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf67	200844	broad.mit.edu	37	3	58849577	58849577	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf35	85438	broad.mit.edu	37	4	71201880	71201880	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf51	285636	broad.mit.edu	37	5	41911007	41911007	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6	729	broad.mit.edu	37	5	41149636	41149636	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf167	253714	broad.mit.edu	37	6	97627245	97627245	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf182	285753	broad.mit.edu	37	6	109471397	109471397	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf182	285753	broad.mit.edu	37	6	109484117	109484117	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf70	55780	broad.mit.edu	37	6	170160823	170160823	+	Silent	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40909773	40909773	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf27	221927	broad.mit.edu	37	7	2583657	2583684	+	Intron	DEL	GCAGAGGGCCTCAGGGAAGATACAAATA	-	-	rs11267702		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf33	202865	broad.mit.edu	37	7	148311163	148311163	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf34	135927	broad.mit.edu	37	7	142637343	142637343	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf63	79846	broad.mit.edu	37	7	89884650	89884650	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8B	732	broad.mit.edu	37	1	57395350	57395350	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf86	389649	broad.mit.edu	37	8	38374040	38374040	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9	735	broad.mit.edu	37	5	39288822	39288822	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf78	51759	broad.mit.edu	37	9	132594139	132594139	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA6	765	broad.mit.edu	37	1	9009428	9009428	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	140880947	140880947	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2787107	2787107	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181765848	181765848	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1910187	1910187	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG2	10369	broad.mit.edu	37	22	36962329	36962329	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG5	27091	broad.mit.edu	37	17	64875131	64875131	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM2	253559	broad.mit.edu	37	3	86063598	86063598	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159161887	159161887	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM4	199731	broad.mit.edu	37	19	44130810	44130810	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAD	790	broad.mit.edu	37	2	27446822	27446822	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188225374	188225374	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188245443	188245443	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1D	57118	broad.mit.edu	37	10	12867623	12867623	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1L1	23271	broad.mit.edu	37	1	200817728	200817728	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7737548	7737548	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7796975	7796975	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP10	843	broad.mit.edu	37	2	202050751	202050751	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP10	843	broad.mit.edu	37	2	202074230	202074230	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP1	834	broad.mit.edu	37	11	104905838	104905838	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP5	838	broad.mit.edu	37	11	104879607	104879607	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER3	347732	broad.mit.edu	37	5	134344818	134344818	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CC2D1A	54862	broad.mit.edu	37	19	14034556	14034556	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CC2D2B	387707	broad.mit.edu	37	10	97776052	97776052	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC125	202243	broad.mit.edu	37	5	68609888	68609888	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC37	348807	broad.mit.edu	37	3	126142136	126142137	+	Intron	DNP	CC	AA	AA			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC38	120935	broad.mit.edu	37	12	96292380	96292380	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC38	120935	broad.mit.edu	37	12	96292419	96292419	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC41	51134	broad.mit.edu	37	12	94818049	94818049	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC48	79825	broad.mit.edu	37	3	128757782	128757782	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC69	26112	broad.mit.edu	37	5	150578765	150578765	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88C	440193	broad.mit.edu	37	14	91825947	91825947	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKBR	887	broad.mit.edu	37	11	6291464	6291464	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCL5	6352	broad.mit.edu	37	17	34207225	34207225	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNE2	9134	broad.mit.edu	37	8	95894999	95894999	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT6B	10693	broad.mit.edu	37	17	33288465	33288465	+	5'UTR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74475751	74475751	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163L1	283316	broad.mit.edu	37	12	7525912	7525912	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD180	4064	broad.mit.edu	37	5	66492277	66492277	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1D	912	broad.mit.edu	37	1	158152621	158152621	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1D	912	broad.mit.edu	37	1	158153982	158153982	+	3'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158325578	158325578	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD38	952	broad.mit.edu	37	4	15818249	15818249	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD38	952	broad.mit.edu	37	4	15826651	15826651	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5L	922	broad.mit.edu	37	1	157805484	157805484	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD93	22918	broad.mit.edu	37	20	23065301	23065301	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD97	976	broad.mit.edu	37	19	14513455	14513455	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14A	8556	broad.mit.edu	37	1	100843034	100843034	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC25B	994	broad.mit.edu	37	20	3781942	3781942	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227182456	227182456	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPA	8476	broad.mit.edu	37	1	227381439	227381439	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA5	113130	broad.mit.edu	37	11	64851367	64851367	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCP2	200008	broad.mit.edu	37	1	54606877	54606877	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24487964	24487964	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24491727	24491727	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24498610	24498610	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	64982074	64982074	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21783481	21783481	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83781882	83781882	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19473682	19473682	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59195204	59195204	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59206530	59206530	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73405795	73405795	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73464725	73464725	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH26	60437	broad.mit.edu	37	20	58559697	58559697	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60499639	60499639	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31299542	31299542	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31317988	31317988	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH8	1006	broad.mit.edu	37	16	61854915	61854915	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26881634	26881634	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26885733	26885733	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR1	92211	broad.mit.edu	37	10	85970714	85970714	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDIPT	10423	broad.mit.edu	37	16	29872528	29872528	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK15	65061	broad.mit.edu	37	2	202698762	202698762	+	Intron	SNP	G	C	C	rs146149737	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL1	8814	broad.mit.edu	37	14	50856906	50856906	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL4	344387	broad.mit.edu	37	2	39414835	39414835	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKN2AIPNL	91368	broad.mit.edu	37	5	133738626	133738630	+	Intron	DEL	AAAAG	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDYL	9425	broad.mit.edu	37	6	4735052	4735052	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM8	1088	broad.mit.edu	37	19	43098787	43098787	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA2B	51032	broad.mit.edu	37	1	15813958	15813958	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR1	9620	broad.mit.edu	37	22	46807707	46807707	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPE	1062	broad.mit.edu	37	4	104068462	104068462	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214781947	214781947	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP63	80254	broad.mit.edu	37	3	134251670	134251670	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP76	79959	broad.mit.edu	37	18	12680695	12680695	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES4	51716	broad.mit.edu	37	16	55803950	55803950	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196654293	196654293	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFTR	1080	broad.mit.edu	37	7	117243607	117243607	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB1	114335	broad.mit.edu	37	19	49539443	49539443	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB8	94115	broad.mit.edu	37	19	49552060	49552060	+	5'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB	1082	broad.mit.edu	37	19	49533389	49533389	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD3	1107	broad.mit.edu	37	17	7798888	7798888	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD4	1108	broad.mit.edu	37	12	6709529	6709529	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHIA	27159	broad.mit.edu	37	1	111861169	111861169	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHL1	10752	broad.mit.edu	37	3	440829	440829	+	Nonsense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHMP2B	25978	broad.mit.edu	37	3	87295084	87295084	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHP	11261	broad.mit.edu	37	15	41562881	41562881	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA6	8973	broad.mit.edu	37	8	42611846	42611846	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB1	1140	broad.mit.edu	37	17	7358658	7358658	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB2	1141	broad.mit.edu	37	1	154544067	154544067	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIITA	4261	broad.mit.edu	37	16	10988997	10988997	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKM	1158	broad.mit.edu	37	19	45818777	45818777	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP1	23332	broad.mit.edu	37	2	122106166	122106166	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143018994	143018994	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN14	23562	broad.mit.edu	37	21	37859218	37859218	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC10A	10462	broad.mit.edu	37	17	6978507	6978507	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4C	170482	broad.mit.edu	37	12	7889881	7889882	+	Intron	DNP	CC	AA	AA			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMBL	134147	broad.mit.edu	37	5	10288614	10288614	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMKLR1	1240	broad.mit.edu	37	12	108685637	108685637	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMPK2	129607	broad.mit.edu	37	2	6990087	6990087	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87641203	87641203	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87656858	87656858	+	Silent	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNN1	1264	broad.mit.edu	37	19	11660685	11660685	+	3'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	99932105	99932105	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1424739	1424739	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	146741176	146741176	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33143540	33143540	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75848326	75848326	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101807016	101807016	+	Splice_Site	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70647965	70647965	+	Silent	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70850769	70850769	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70894575	70894575	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94041443	94041443	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL21A1	81578	broad.mit.edu	37	6	56006587	56006587	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139638525	139638525	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL2A1	1280	broad.mit.edu	37	12	48371152	48371152	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189858671	189858671	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189863490	189863490	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A5	1287	broad.mit.edu	37	X	107849872	107849872	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238275710	238275710	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A6	131873	broad.mit.edu	37	3	130284269	130284269	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC11	78989	broad.mit.edu	37	2	3652162	3652162	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMMD1	150684	broad.mit.edu	37	2	62363161	62363161	+	3'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMP	1311	broad.mit.edu	37	19	18899889	18899889	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO2B	10391	broad.mit.edu	37	15	69011757	69011757	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO6	84940	broad.mit.edu	37	17	27945929	27945929	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX7A1	1346	broad.mit.edu	37	19	36642525	36642525	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA2	1358	broad.mit.edu	37	7	129913068	129913068	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA5	93979	broad.mit.edu	37	7	130002886	130002886	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPB1	1360	broad.mit.edu	37	3	148545844	148545844	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB3	22849	broad.mit.edu	37	10	93897334	93897334	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211457611	211457611	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CR1L	1379	broad.mit.edu	37	1	207896969	207896969	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3L1	90993	broad.mit.edu	37	11	46338851	46338851	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIM1	51232	broad.mit.edu	37	2	36744595	36744595	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD1	83690	broad.mit.edu	37	8	75941685	75941685	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRNN	49860	broad.mit.edu	37	1	152382233	152382233	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRNN	49860	broad.mit.edu	37	1	152384754	152384754	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRY1	1407	broad.mit.edu	37	12	107393682	107393682	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBB2	1415	broad.mit.edu	37	22	25623959	25623959	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBB3	1417	broad.mit.edu	37	22	25597356	25597356	+	5'UTR	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2876253	2876253	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3087561	3087561	+	Splice_Site	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34401436	34401436	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113293346	113293346	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113585679	113585679	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113585804	113585804	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113668420	113668420	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPP1	79848	broad.mit.edu	37	8	67976536	67976536	+	5'Flank	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CT45A5	441521	broad.mit.edu	37	X	134947984	134947984	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTAGE6	340307	broad.mit.edu	37	7	143453488	143453488	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTLA4	1493	broad.mit.edu	37	2	204736146	204736146	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80333354	80333354	+	Intron	SNP	G	T	T	rs150715083	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80874660	80874661	+	Intron	INS	-	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	68979401	68979401	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTTNBP2	83992	broad.mit.edu	37	7	117431174	117431174	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX1	1523	broad.mit.edu	37	7	101459241	101459241	+	5'Flank	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWF19L2	143884	broad.mit.edu	37	11	107274538	107274538	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49032935	49032935	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXXC5	51523	broad.mit.edu	37	5	139060297	139060297	+	Silent	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf21	80231	broad.mit.edu	37	X	30577698	30577698	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf41	139212	broad.mit.edu	37	X	106459949	106459949	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf66	347487	broad.mit.edu	37	X	139038425	139038425	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYLD	1540	broad.mit.edu	37	16	50813643	50813643	+	Silent	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP19A1	1588	broad.mit.edu	37	15	51504815	51504815	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP24A1	1591	broad.mit.edu	37	20	52779112	52779112	+	Intron	SNP	A	G	G	rs74829893	byFrequency;by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP27A1	1593	broad.mit.edu	37	2	219677900	219677900	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A7	1549	broad.mit.edu	37	19	41382307	41382307	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2C19	1557	broad.mit.edu	37	10	96534730	96534730	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2F1	1572	broad.mit.edu	37	19	41622361	41622361	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F12	66002	broad.mit.edu	37	19	15784533	15784533	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F8	11283	broad.mit.edu	37	19	15734867	15734867	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39383025	39383025	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH1	1602	broad.mit.edu	37	13	72049701	72049702	+	Intron	DNP	CC	AA	AA			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAO	1610	broad.mit.edu	37	12	109294182	109294182	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAP3	7818	broad.mit.edu	37	1	155697461	155697461	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DARC	2532	broad.mit.edu	37	1	159175730	159175730	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF17	80067	broad.mit.edu	37	2	172334560	172334560	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27997831	27997831	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160209744	160209744	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160249708	160249708	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8	50717	broad.mit.edu	37	1	160249730	160249730	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN3	11258	broad.mit.edu	37	9	34614163	34614163	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCT	1638	broad.mit.edu	37	13	95117945	95117945	+	Missense_Mutation	SNP	C	G	G	rs142171852	byFrequency	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX50	79009	broad.mit.edu	37	10	70695825	70695825	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX52	11056	broad.mit.edu	37	17	35980934	35980934	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2C	163259	broad.mit.edu	37	1	115147479	115147479	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4C	55667	broad.mit.edu	37	9	19305278	19305278	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC1B	55789	broad.mit.edu	37	5	59899255	59899255	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB59	494513	broad.mit.edu	37	2	179325639	179325639	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKD	8527	broad.mit.edu	37	2	234299161	234299161	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIDO1	11083	broad.mit.edu	37	20	61513083	61513083	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC1	116093	broad.mit.edu	37	2	189599405	189599405	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKFZp686A1627	266695	broad.mit.edu	37	13	19624017	19624017	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DKK3	27122	broad.mit.edu	37	11	11985969	11985969	+	3'UTR	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83502076	83502076	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83525934	83525934	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	84027986	84027986	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124357566	124357566	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMBT1	1755	broad.mit.edu	37	10	124399744	124399744	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRT1	1761	broad.mit.edu	37	9	968030	968030	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRT3	58524	broad.mit.edu	37	9	990652	990652	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMWD	1762	broad.mit.edu	37	19	46287458	46287458	+	3'UTR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL1	1657	broad.mit.edu	37	5	118479675	118479675	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	20946702	20946702	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13841843	13841843	+	Silent	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196740521	196740521	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11659784	11659784	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11784760	11784760	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB4	11080	broad.mit.edu	37	1	78479070	78479070	+	Missense_Mutation	SNP	C	G	G	rs141666453		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC6	9829	broad.mit.edu	37	1	65851517	65851517	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM1L	10059	broad.mit.edu	37	12	32884849	32884849	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM2	1785	broad.mit.edu	37	19	10923017	10923017	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM3	26052	broad.mit.edu	37	1	172376984	172376984	+	3'UTR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169111246	169111246	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169116294	169116294	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169141005	169141005	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51393403	51393403	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK3	1795	broad.mit.edu	37	3	51395333	51395333	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOK6	220164	broad.mit.edu	37	18	67365537	67365537	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP1	1800	broad.mit.edu	37	16	89696899	89696899	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116226052	116226052	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP6	1804	broad.mit.edu	37	7	154143449	154143449	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2	283417	broad.mit.edu	37	12	63987980	63987980	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2	283417	broad.mit.edu	37	12	64045735	64045735	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL4	10570	broad.mit.edu	37	10	134010510	134010510	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105440154	105440154	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DQX1	165545	broad.mit.edu	37	2	74750592	74750592	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRAM2	128338	broad.mit.edu	37	1	111663261	111663261	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD1	1812	broad.mit.edu	37	5	174870079	174870079	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC1	1823	broad.mit.edu	37	18	28737517	28737517	+	Silent	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41450679	41450679	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41719760	41719760	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56380134	56380134	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56391360	56391360	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56481202	56481202	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56510808	56510808	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOXA1	90527	broad.mit.edu	37	15	45412680	45412680	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS2L	54920	broad.mit.edu	37	16	68109352	68109352	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP21	63904	broad.mit.edu	37	X	44703540	44703540	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUXA	503835	broad.mit.edu	37	19	57678938	57678938	+	5'Flank	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102472507	102472507	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1LI1	51143	broad.mit.edu	37	3	32587436	32587436	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71797199	71797199	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71829926	71829926	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F7	144455	broad.mit.edu	37	12	77449521	77449521	+	Intron	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA2R	60401	broad.mit.edu	37	X	65824404	65824404	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDEM3	80267	broad.mit.edu	37	1	184681671	184681671	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83402632	83402632	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDNRB	1910	broad.mit.edu	37	13	78474043	78474043	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A2	1917	broad.mit.edu	37	20	62129204	62129204	+	5'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFCAB2	84288	broad.mit.edu	37	1	245180620	245180620	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFNB2	1948	broad.mit.edu	37	13	107164970	107164970	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFL6	25975	broad.mit.edu	37	X	13641932	13641932	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2AK1	27102	broad.mit.edu	37	7	6066319	6066319	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C2	27161	broad.mit.edu	37	8	141567357	141567357	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3F	8665	broad.mit.edu	37	11	8014290	8014290	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3IP1	442720	broad.mit.edu	37	7	109599839	109599839	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4B	1975	broad.mit.edu	37	12	53431372	53431372	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G1	1981	broad.mit.edu	37	3	184043632	184043632	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELFN2	114794	broad.mit.edu	37	22	37770693	37770693	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	36895151	36895151	+	3'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELP4	26610	broad.mit.edu	37	11	31531341	31531341	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EME2	197342	broad.mit.edu	37	16	1826213	1826213	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6921873	6921873	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP6	133121	broad.mit.edu	37	4	185038113	185038113	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD6	955	broad.mit.edu	37	20	25188036	25188036	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EP400	57634	broad.mit.edu	37	12	132530139	132530139	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131186758	131186759	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L4B	54566	broad.mit.edu	37	9	112030810	112030810	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89390222	89390222	+	Splice_Site	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97311551	97311551	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	97329609	97329609	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93964513	93964513	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93974360	93974360	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB1	2047	broad.mit.edu	37	3	134884855	134884855	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB2	2048	broad.mit.edu	37	1	23191473	23191473	+	Silent	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB2	2048	broad.mit.edu	37	1	23191648	23191648	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142564152	142564152	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220152725	220152725	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPRS	2058	broad.mit.edu	37	1	220184450	220184450	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EREG	2069	broad.mit.edu	37	4	75250497	75250497	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERMAP	114625	broad.mit.edu	37	1	43308638	43308638	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESRRG	2104	broad.mit.edu	37	1	216824132	216824132	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETNK1	55500	broad.mit.edu	37	12	22826628	22826628	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC2	55770	broad.mit.edu	37	6	576740	576740	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC3	11336	broad.mit.edu	37	5	464530	464530	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXPH5	23086	broad.mit.edu	37	11	108380887	108380887	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA1	2138	broad.mit.edu	37	8	72234362	72234362	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EYA2	2139	broad.mit.edu	37	20	45811774	45811774	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F10	2159	broad.mit.edu	37	13	113797983	113797983	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAF1	11124	broad.mit.edu	37	1	51210244	51210244	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM117A	81558	broad.mit.edu	37	17	47794983	47794983	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120C	54954	broad.mit.edu	37	X	54159204	54159204	+	Silent	SNP	T	C	C	rs45611732	byFrequency	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM129A	116496	broad.mit.edu	37	1	184792938	184792939	+	Intron	DNP	CC	AA	AA			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61014171	61014171	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171A1	221061	broad.mit.edu	37	10	15290733	15290733	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM190B	54462	broad.mit.edu	37	10	86150652	86150652	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM38B	63895	broad.mit.edu	37	18	10671680	10671680	+	Silent	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM38B	63895	broad.mit.edu	37	18	10696600	10696600	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM3B	54097	broad.mit.edu	37	21	42718992	42718992	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37027667	37027667	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM53C	51307	broad.mit.edu	37	5	137677475	137677475	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM58B	339521	broad.mit.edu	37	1	200182769	200182769	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM58B	339521	broad.mit.edu	37	1	200183300	200183300	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177249959	177249959	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067232	190067232	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190129899	190129899	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190203503	190203503	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM63A	55793	broad.mit.edu	37	1	150980932	150980932	+	5'Flank	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65C	140876	broad.mit.edu	37	20	49227544	49227545	+	Intron	INS	-	GGCTTAGTGCCGGGCC	GGCTTAGTGCCGGGCC	rs144167038	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM73A	374986	broad.mit.edu	37	1	78280765	78280765	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83B	222584	broad.mit.edu	37	6	54735190	54735190	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83B	222584	broad.mit.edu	37	6	54792420	54792420	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83D	81610	broad.mit.edu	37	20	37580398	37580398	+	Silent	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM90A1	55138	broad.mit.edu	37	12	8374849	8374849	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAP	2191	broad.mit.edu	37	2	163066509	163066509	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT1	2195	broad.mit.edu	37	4	187538097	187538097	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92495149	92495149	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48756162	48756162	+	Missense_Mutation	SNP	C	A	A	rs140626		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127599053	127599053	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN3	84467	broad.mit.edu	37	19	8151216	8151216	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL5	26234	broad.mit.edu	37	4	15646167	15646167	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO11	80204	broad.mit.edu	37	2	48045893	48045893	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO38	81545	broad.mit.edu	37	5	147807061	147807061	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCER1A	2205	broad.mit.edu	37	1	159272706	159272706	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR1C	100132417	broad.mit.edu	37	1	149375298	149375298	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3A	2214	broad.mit.edu	37	1	161519571	161519571	+	Splice_Site	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3B	2215	broad.mit.edu	37	1	161596073	161596073	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3B	2215	broad.mit.edu	37	1	161599655	161599655	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN2	2220	broad.mit.edu	37	9	137772709	137772709	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157490787	157490787	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157497282	157497282	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157497603	157497603	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL5	83416	broad.mit.edu	37	1	157513947	157513947	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	124987589	124987589	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	124988029	124988029	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FERD3L	222894	broad.mit.edu	37	7	19184867	19184867	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER	2241	broad.mit.edu	37	5	108436298	108436298	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGA	2243	broad.mit.edu	37	4	155510806	155510806	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGB	2244	broad.mit.edu	37	4	155490450	155490450	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGD5	152273	broad.mit.edu	37	3	14942494	14942494	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF12	2257	broad.mit.edu	37	3	191861949	191861949	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHDC1	85462	broad.mit.edu	37	4	153889280	153889280	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34288915	34288915	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIGNL1	63979	broad.mit.edu	37	7	50513772	50513772	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FJX1	24147	broad.mit.edu	37	11	35641196	35641196	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG2	388698	broad.mit.edu	37	1	152324299	152324299	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152280610	152280611	+	Frame_Shift_Ins	INS	-	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152280761	152280761	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLI1	2313	broad.mit.edu	37	11	128642833	128642833	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ46321	389763	broad.mit.edu	37	9	84608624	84608624	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLNC	2318	broad.mit.edu	37	7	128496648	128496648	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT4	2324	broad.mit.edu	37	5	180047313	180047313	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT4	2324	broad.mit.edu	37	5	180056964	180056964	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240306045	240306045	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO1	2326	broad.mit.edu	37	1	171240283	171240283	+	Intron	DEL	G	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO2	2327	broad.mit.edu	37	1	171165890	171165890	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO3	2328	broad.mit.edu	37	1	171076937	171076937	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO5	2330	broad.mit.edu	37	1	146684991	146684991	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1NB	158521	broad.mit.edu	37	X	147090218	147090218	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FN1	2335	broad.mit.edu	37	2	216272028	216272028	+	Silent	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP4	23360	broad.mit.edu	37	11	47746181	47746181	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89421663	89421663	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXC2	2303	broad.mit.edu	37	16	86601202	86601202	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXJ3	22887	broad.mit.edu	37	1	42647591	42647591	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXRED1	55572	broad.mit.edu	37	11	126141286	126141286	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FPR3	2359	broad.mit.edu	37	19	52327484	52327484	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79360289	79360289	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14823206	14823206	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD1	22844	broad.mit.edu	37	9	37746358	37746358	+	Silent	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48592824	48592824	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL4	23105	broad.mit.edu	37	5	132763452	132763452	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTHL17	53940	broad.mit.edu	37	X	31089806	31089806	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTL	2512	broad.mit.edu	37	19	49469500	49469500	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUNDC2P2	388965	broad.mit.edu	37	2	84518273	84518273	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT11	170384	broad.mit.edu	37	10	75533499	75533499	+	Silent	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD1	8321	broad.mit.edu	37	7	90896045	90896045	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB1	2549	broad.mit.edu	37	4	144361103	144361103	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101369535	101369548	+	Intron	DEL	CGTAAATGCAGAAT	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151336822	151336822	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161495169	161495169	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161530945	161530945	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG2	2566	broad.mit.edu	37	5	161576503	161576503	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27777961	27777961	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAD2	2572	broad.mit.edu	37	10	26506631	26506631	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT13	114805	broad.mit.edu	37	2	154996906	154996906	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT13	114805	broad.mit.edu	37	2	155098649	155098649	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT8	26290	broad.mit.edu	37	12	4830145	4830145	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	172735864	172735864	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAPDHS	26330	broad.mit.edu	37	19	36033824	36033824	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L2	246176	broad.mit.edu	37	17	34077352	34077352	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L2	246176	broad.mit.edu	37	17	34079360	34079360	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9885008	9885008	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104123116	104123116	+	Silent	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBF1	8729	broad.mit.edu	37	10	104129046	104129046	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP6	163351	broad.mit.edu	37	1	89849314	89849314	+	Splice_Site	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCC1	79571	broad.mit.edu	37	7	127223074	127223074	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCET2	257144	broad.mit.edu	37	3	111845684	111845684	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCM1	8521	broad.mit.edu	37	6	52993253	52993253	+	Silent	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GFRAL	389400	broad.mit.edu	37	6	55192317	55192317	+	5'UTR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGA3	23163	broad.mit.edu	37	17	73238543	73238543	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGNBP2	79893	broad.mit.edu	37	17	34935847	34935847	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGT8P	645367	broad.mit.edu	37	2	91964014	91964014	+	RNA	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42719541	42719541	+	3'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121745675	121745675	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP2R	9340	broad.mit.edu	37	17	9739826	9739826	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLS	2744	broad.mit.edu	37	2	191792198	191792198	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLT8D2	83468	broad.mit.edu	37	12	104397019	104397019	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPS	8833	broad.mit.edu	37	3	155628515	155628515	+	Silent	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNPAT	8443	broad.mit.edu	37	1	231406679	231406679	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLGB1	2804	broad.mit.edu	37	3	121417301	121417301	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP2	2813	broad.mit.edu	37	16	20329602	20329602	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GP2	2813	broad.mit.edu	37	16	20337584	20337584	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH1	55094	broad.mit.edu	37	19	33603360	33603360	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR101	83550	broad.mit.edu	37	X	136113649	136113649	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135430790	135430790	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47684471	47684471	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR133	283383	broad.mit.edu	37	12	131466440	131466448	+	In_Frame_Del	DEL	TCTTTTTTC	-	-	rs74744169	byFrequency;by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR149	344758	broad.mit.edu	37	3	154070110	154070111	+	Intron	DNP	GG	TT	TT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR32	2854	broad.mit.edu	37	19	51274412	51274412	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	90281424	90281424	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37307394	37307394	+	Nonsense_Mutation	SNP	G	T	T	rs149891912	byFrequency	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK5	2901	broad.mit.edu	37	19	42510926	42510926	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM7	2917	broad.mit.edu	37	3	7456680	7456680	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRPEL1	80273	broad.mit.edu	37	4	7062639	7062639	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSK3B	2932	broad.mit.edu	37	3	119748274	119748274	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSR	2936	broad.mit.edu	37	8	30565731	30565731	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTDC1	79712	broad.mit.edu	37	2	144714812	144714812	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2A1	2957	broad.mit.edu	37	14	81670426	81670426	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27517247	27517247	+	Silent	SNP	G	A	A	rs35776875	byFrequency;by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C4	9329	broad.mit.edu	37	9	135553434	135553434	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A2	2977	broad.mit.edu	37	11	106695503	106695503	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A2	2977	broad.mit.edu	37	11	106697260	106697260	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2C	2984	broad.mit.edu	37	12	14809565	14809565	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HADH	3033	broad.mit.edu	37	4	108931125	108931125	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO2	51179	broad.mit.edu	37	1	119925580	119925580	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HARS	3035	broad.mit.edu	37	5	140053968	140053968	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS8	93323	broad.mit.edu	37	19	17160601	17160601	+	3'UTR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBE1	3046	broad.mit.edu	37	11	5289936	5289936	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	239990376	239990376	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC9	9734	broad.mit.edu	37	7	18869184	18869184	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR3	55027	broad.mit.edu	37	16	50118121	50118121	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41007441	41007441	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65197255	65197255	+	Nonsense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEXIM1	10614	broad.mit.edu	37	17	43227518	43227518	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HGF	3082	broad.mit.edu	37	7	81388097	81388097	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIRA	7290	broad.mit.edu	37	22	19376025	19376025	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H1A	3024	broad.mit.edu	37	6	26020628	26020628	+	5'Flank	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H1D	3007	broad.mit.edu	37	6	26234851	26234851	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H3I	8354	broad.mit.edu	37	6	27839642	27839642	+	3'UTR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK1	3098	broad.mit.edu	37	10	71146055	71146055	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMBS	3145	broad.mit.edu	37	11	118959797	118959797	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCR	3156	broad.mit.edu	37	5	74646642	74646642	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA3	220988	broad.mit.edu	37	2	178081436	178081436	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB9	3219	broad.mit.edu	37	17	46703206	46703206	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXD3	3232	broad.mit.edu	37	2	177036321	177036321	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152195503	152195503	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRSP12	10247	broad.mit.edu	37	8	99118453	99118453	+	Intron	DEL	C	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST5	222537	broad.mit.edu	37	6	114378433	114378433	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSF5	124535	broad.mit.edu	37	17	56540081	56540081	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSFX2	100130086	broad.mit.edu	37	X	148839553	148839553	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSFX2	100130086	broad.mit.edu	37	X	148842439	148842439	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSFX2	100130086	broad.mit.edu	37	X	148842445	148842445	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPH1	10808	broad.mit.edu	37	13	31714297	31714297	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53653002	53653002	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICAM5	7087	broad.mit.edu	37	19	10403932	10403932	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ID2	3398	broad.mit.edu	37	2	8822264	8822264	+	5'UTR	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFIT1B	439996	broad.mit.edu	37	10	91144225	91144225	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA7	3444	broad.mit.edu	37	9	21202097	21202097	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNB1	3456	broad.mit.edu	37	9	21077762	21077762	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT172	26160	broad.mit.edu	37	2	27708432	27708432	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGDCC4	57722	broad.mit.edu	37	15	65682635	65682635	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP3	10643	broad.mit.edu	37	7	23509789	23509789	+	5'UTR	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160482400	160482400	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFN1	91156	broad.mit.edu	37	1	201185842	201185842	+	Missense_Mutation	SNP	G	A	A	rs143611839		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGHMBP2	3508	broad.mit.edu	37	11	68701365	68701365	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF11	152404	broad.mit.edu	37	3	118624668	118624668	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKE	9641	broad.mit.edu	37	1	206667311	206667311	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKZF5	64376	broad.mit.edu	37	10	124754317	124754317	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL12RB2	3595	broad.mit.edu	37	1	67816592	67816592	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMMP2L	83943	broad.mit.edu	37	7	110303633	110303633	+	3'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPACT	55364	broad.mit.edu	37	18	22020507	22020507	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG1	3617	broad.mit.edu	37	6	76728357	76728357	+	Intron	SNP	C	A	A	rs146186081	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG2	50939	broad.mit.edu	37	3	100976422	100976422	+	Silent	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4B	8821	broad.mit.edu	37	4	143324217	143324217	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF2BP2	359948	broad.mit.edu	37	1	234743041	234743041	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182399688	182399688	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15726137	15726137	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA9	3680	broad.mit.edu	37	3	37555473	37555473	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31427872	31427872	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31435413	31435413	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30486668	30486668	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAV	3685	broad.mit.edu	37	2	187501011	187501011	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5L	347365	broad.mit.edu	37	X	54823578	54823578	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH5	80760	broad.mit.edu	37	10	7684001	7684001	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156671559	156671559	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITM2C	81618	broad.mit.edu	37	2	231740324	231740324	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPKC	80271	broad.mit.edu	37	19	41243686	41243686	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAK3	3718	broad.mit.edu	37	19	17949217	17949217	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP2	9832	broad.mit.edu	37	5	147028044	147028044	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH2	57158	broad.mit.edu	37	20	42744380	42744380	+	Silent	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH2	57158	broad.mit.edu	37	20	42788516	42788516	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KAT2B	8850	broad.mit.edu	37	3	20113629	20113629	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCND2	3751	broad.mit.edu	37	7	119915484	119915484	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63269127	63269127	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH8	131096	broad.mit.edu	37	3	19554549	19554549	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ10	3766	broad.mit.edu	37	1	160011198	160011198	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ12	3768	broad.mit.edu	37	17	21318835	21318835	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ16	3773	broad.mit.edu	37	17	68129006	68129006	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ8	3764	broad.mit.edu	37	12	21919586	21919586	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK10	54207	broad.mit.edu	37	14	88658479	88658479	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK13	56659	broad.mit.edu	37	14	90651011	90651011	+	Silent	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN4	3783	broad.mit.edu	37	19	44273909	44273909	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ1	3784	broad.mit.edu	37	11	2594026	2594026	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196227521	196227521	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196285133	196285133	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36703265	36703265	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36746674	36746674	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36766760	36766761	+	Intron	DNP	GG	AT	AT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2B	84678	broad.mit.edu	37	12	121878685	121878685	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5A	5927	broad.mit.edu	37	12	463210	463211	+	Intron	INS	-	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5B	10765	broad.mit.edu	37	1	202777823	202777823	+	5'Flank	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55948769	55948769	+	Frame_Shift_Del	DEL	C	-	-	rs67220958		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDR	3791	broad.mit.edu	37	4	55964017	55964017	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142638514	142638514	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0090	23065	broad.mit.edu	37	1	19571464	19571464	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0232	9778	broad.mit.edu	37	4	6878407	6878407	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0753	9851	broad.mit.edu	37	17	6513541	6513541	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0895	23366	broad.mit.edu	37	7	36429683	36429683	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0907	22889	broad.mit.edu	37	1	155887306	155887306	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1244	57221	broad.mit.edu	37	6	138584558	138584558	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1274	27143	broad.mit.edu	37	10	72300921	72300921	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1310	55683	broad.mit.edu	37	2	97275400	97275400	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43493839	43493839	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1841	84542	broad.mit.edu	37	2	61304276	61304276	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIDINS220	57498	broad.mit.edu	37	2	8928836	8928836	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF16B	55614	broad.mit.edu	37	20	16316589	16316589	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF18B	146909	broad.mit.edu	37	17	43013481	43013481	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1A	547	broad.mit.edu	37	2	241686786	241686786	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200959110	200959110	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF24	347240	broad.mit.edu	37	9	34259739	34259739	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF26B	55083	broad.mit.edu	37	1	245848964	245848964	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF2B	84643	broad.mit.edu	37	17	51901063	51901063	+	Silent	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF3C	3797	broad.mit.edu	37	2	26203366	26203368	+	In_Frame_Del	DEL	GCT	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57958726	57958726	+	Silent	SNP	C	T	T	rs143178113		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIN	22944	broad.mit.edu	37	10	7804404	7804404	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL3	3804	broad.mit.edu	37	19	55268524	55268524	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL3	3804	broad.mit.edu	37	19	55278411	55278411	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL	55243	broad.mit.edu	37	1	158059485	158059485	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHDC5	57542	broad.mit.edu	37	12	27950466	27950466	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KMO	8564	broad.mit.edu	37	1	241731862	241731862	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KPRP	448834	broad.mit.edu	37	1	152733726	152733726	+	Silent	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT27	342574	broad.mit.edu	37	17	38933680	38933680	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT2	3849	broad.mit.edu	37	12	53041528	53041528	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT33A	3883	broad.mit.edu	37	17	39503334	39503334	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT36	8689	broad.mit.edu	37	17	39642675	39642675	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT38	8687	broad.mit.edu	37	17	39596834	39596834	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT4	3851	broad.mit.edu	37	12	53202170	53202170	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT85	3891	broad.mit.edu	37	12	52758717	52758717	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-3	386682	broad.mit.edu	37	21	45978250	45978250	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP12-2	353323	broad.mit.edu	37	21	46086610	46086610	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP9-9	81870	broad.mit.edu	37	17	39389067	39389067	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KSR2	283455	broad.mit.edu	37	12	118020147	118020147	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KYNU	8942	broad.mit.edu	37	2	143718265	143718265	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21441740	21441740	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA5	3911	broad.mit.edu	37	20	60907577	60907577	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107592607	107592607	+	Nonsense_Mutation	SNP	G	T	T	rs34532909	byFrequency;by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP4	113251	broad.mit.edu	37	12	50822678	50822678	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS1	9113	broad.mit.edu	37	6	150004813	150004813	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LATS2	26524	broad.mit.edu	37	13	21563266	21563266	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2B	26239	broad.mit.edu	37	1	152659293	152659293	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCMT2	9836	broad.mit.edu	37	15	43621794	43621794	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LELP1	149018	broad.mit.edu	37	1	153177535	153177535	+	3'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPREL1	55214	broad.mit.edu	37	3	189700804	189700804	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66085595	66085595	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI1	9211	broad.mit.edu	37	10	95552545	95552545	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI2	55203	broad.mit.edu	37	4	25005757	25005757	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR5	8549	broad.mit.edu	37	12	71929009	71929009	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR6	59352	broad.mit.edu	37	1	202245499	202245499	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55086082	55086082	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55087569	55087569	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA3	11026	broad.mit.edu	37	19	54803140	54803140	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB3	11025	broad.mit.edu	37	19	54745777	54745777	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMA1	51474	broad.mit.edu	37	12	50571335	50571335	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIMA1	51474	broad.mit.edu	37	12	50571584	50571584	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIN28B	389421	broad.mit.edu	37	6	105406060	105406060	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMOD2	442721	broad.mit.edu	37	7	123302675	123302675	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100129055	100129055	broad.mit.edu	37	10	38475564	38475564	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100130331	100130331	broad.mit.edu	37	1	238045618	238045618	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100302640	100302640	broad.mit.edu	37	3	106823844	106823844	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285780	285780	broad.mit.edu	37	6	6535734	6535734	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC400759	400759	broad.mit.edu	37	1	89889460	89889460	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440040	440040	broad.mit.edu	37	11	49597847	49597847	+	5'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442308	442308	broad.mit.edu	37	7	55713533	55713533	+	RNA	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC643955	643955	broad.mit.edu	37	7	62758822	62758822	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75814311	75814311	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22764138	22764138	+	RNA	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118145781	118145781	+	Silent	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	161014927	161014927	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN2	9663	broad.mit.edu	37	18	2922155	2922155	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN1	57622	broad.mit.edu	37	19	39804663	39804663	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRGUK	136332	broad.mit.edu	37	7	133821833	133821833	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141215131	141215131	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141232926	141232926	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141609221	141609221	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141762977	141762977	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141816619	141816619	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1	4035	broad.mit.edu	37	12	57574278	57574278	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170092556	170092556	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP4	4038	broad.mit.edu	37	11	46889781	46889781	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC30	339291	broad.mit.edu	37	18	7231306	7231306	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC32	2615	broad.mit.edu	37	11	76372213	76372213	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52861976	52861976	+	Silent	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRCC1	85444	broad.mit.edu	37	8	86047325	86047326	+	Intron	INS	-	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ4	344657	broad.mit.edu	37	3	169539777	169539777	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRK2	120892	broad.mit.edu	37	12	40709081	40709081	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRWD1	222229	broad.mit.edu	37	7	102108635	102108635	+	Splice_Site	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTF	4057	broad.mit.edu	37	3	46479406	46479406	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LY9	4063	broad.mit.edu	37	1	160784514	160784514	+	Missense_Mutation	SNP	C	G	G	rs145903479	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYSMD1	388695	broad.mit.edu	37	1	151137501	151137501	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235969181	235969181	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235976294	235976294	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39902137	39902137	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA3	4102	broad.mit.edu	37	X	151935332	151935332	+	Missense_Mutation	SNP	C	T	T	rs35983118	byFrequency;by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA9B	728269	broad.mit.edu	37	X	148664881	148664881	+	5'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGI2	9863	broad.mit.edu	37	7	78131120	78131120	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML1	9794	broad.mit.edu	37	5	179201511	179201511	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MANBA	4126	broad.mit.edu	37	4	103557061	103557061	+	Silent	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1B	4131	broad.mit.edu	37	5	71495673	71495673	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1D	254042	broad.mit.edu	37	2	172930254	172930254	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21208480	21208481	+	Intron	DNP	GG	TT	TT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K1	11184	broad.mit.edu	37	19	39100387	39100387	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK1IP1L	93487	broad.mit.edu	37	14	55529931	55529931	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK1	5594	broad.mit.edu	37	22	22142807	22142807	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKAPK5	8550	broad.mit.edu	37	12	112308955	112308955	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	164534532	164534532	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCO	8685	broad.mit.edu	37	2	119752128	119752128	+	3'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARS	4141	broad.mit.edu	37	12	57881806	57881806	+	5'Flank	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186953804	186953804	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN4	8785	broad.mit.edu	37	20	43927056	43927056	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCART3P	442229	broad.mit.edu	37	6	66499024	66499024	+	RNA	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCART6	401612	broad.mit.edu	37	X	103349841	103349841	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCCC2	64087	broad.mit.edu	37	5	70892349	70892349	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCF2	4168	broad.mit.edu	37	X	138713452	138713452	+	Intron	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCM4	4173	broad.mit.edu	37	8	48883377	48883377	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDFIC	29969	broad.mit.edu	37	7	114655879	114655879	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MECP2	4204	broad.mit.edu	37	X	153296144	153296144	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150840592	150840592	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	150908777	150908777	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12L	116931	broad.mit.edu	37	3	151105804	151105804	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13L	23389	broad.mit.edu	37	12	116420396	116420396	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED13L	23389	broad.mit.edu	37	12	116675300	116675300	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED1	5469	broad.mit.edu	37	17	37595433	37595433	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED30	90390	broad.mit.edu	37	8	118535548	118535548	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2C	4208	broad.mit.edu	37	5	88056781	88056781	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126769302	126769302	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL13	51603	broad.mit.edu	37	1	171759628	171759628	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5	4249	broad.mit.edu	37	2	135206206	135206206	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIA2	117153	broad.mit.edu	37	14	39716921	39716921	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL2	9645	broad.mit.edu	37	11	12265624	12265624	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICALCL	84953	broad.mit.edu	37	11	12315660	12315660	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1283-1	100302265	broad.mit.edu	37	19	54191737	54191737	+	RNA	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR411	693121	broad.mit.edu	37	14	101488548	101488548	+	5'Flank	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR498	574460	broad.mit.edu	37	19	54175364	54175364	+	5'Flank	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR498	574460	broad.mit.edu	37	19	54177546	54177546	+	RNA	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR887	100126347	broad.mit.edu	37	5	15935336	15935336	+	RNA	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129906292	129906292	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151878797	151878797	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT3	4300	broad.mit.edu	37	9	20413979	20413979	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP13	4322	broad.mit.edu	37	11	102820906	102820906	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP25	64386	broad.mit.edu	37	16	3100498	3100498	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMRN1	22915	broad.mit.edu	37	4	90857896	90857896	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORF4	10934	broad.mit.edu	37	4	174537206	174537206	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPHOSPH8	54737	broad.mit.edu	37	13	20246068	20246068	+	3'UTR	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPO	4353	broad.mit.edu	37	17	56350859	56350859	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED2	744	broad.mit.edu	37	11	30433061	30433061	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED2	744	broad.mit.edu	37	11	30602063	30602063	+	5'Flank	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MREG	55686	broad.mit.edu	37	2	216861126	216861126	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRM1	79922	broad.mit.edu	37	17	34964586	34964586	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRO	83876	broad.mit.edu	37	18	48331607	48331607	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL53	116540	broad.mit.edu	37	2	74699773	74699773	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS12	6183	broad.mit.edu	37	19	39421872	39421872	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRTO4	51154	broad.mit.edu	37	1	19585098	19585098	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60165337	60165337	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47698047	47698047	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47748974	47748974	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1P2	11209	broad.mit.edu	37	1	16976095	16976095	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT1H	4496	broad.mit.edu	37	16	56703925	56703925	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT2A	4502	broad.mit.edu	37	16	56642595	56642595	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTF1	4520	broad.mit.edu	37	1	38287773	38287773	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1L	25902	broad.mit.edu	37	6	151420977	151420977	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFR	4524	broad.mit.edu	37	1	11855339	11855339	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR11	10903	broad.mit.edu	37	1	149902485	149902485	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR11	10903	broad.mit.edu	37	1	149903316	149903316	+	Missense_Mutation	SNP	G	T	T	rs151219180		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR8	55613	broad.mit.edu	37	X	63557210	63557210	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR9	66036	broad.mit.edu	37	8	11163743	11163743	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTPAP	55149	broad.mit.edu	37	10	30659789	30659789	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8968993	8968993	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9018636	9018636	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9018640	9018640	+	Intron	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9028316	9028316	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9049864	9049864	+	Silent	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9059267	9059267	+	Silent	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9071588	9071589	+	Frame_Shift_Ins	INS	-	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1082526	1082526	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC5B	727897	broad.mit.edu	37	11	1154331	1154331	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC7	4589	broad.mit.edu	37	4	71347134	71347134	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3235434	3235434	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA8	54587	broad.mit.edu	37	1	1289700	1289700	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPH	4608	broad.mit.edu	37	1	203138136	203138136	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCT1	80177	broad.mit.edu	37	6	153027165	153027165	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYF5	4617	broad.mit.edu	37	12	81112769	81112769	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10254091	10254091	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH15	22989	broad.mit.edu	37	3	108205246	108205246	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10419236	10419236	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10446927	10446927	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10356686	10356686	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23885631	23885631	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH7	4625	broad.mit.edu	37	14	23902894	23902894	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10299852	10299852	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL2	4633	broad.mit.edu	37	12	111349026	111349026	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL3	4634	broad.mit.edu	37	3	46901262	46901262	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18A	399687	broad.mit.edu	37	17	27493181	27493181	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26400768	26400768	+	Silent	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1A	4640	broad.mit.edu	37	12	57440633	57440633	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1F	4542	broad.mit.edu	37	19	8601438	8601438	+	Silent	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26285528	26285528	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3A	53904	broad.mit.edu	37	10	26457774	26457774	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171092687	171092687	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72191281	72191281	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO9A	4649	broad.mit.edu	37	15	72191292	72191292	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOZ2	51778	broad.mit.edu	37	4	120107118	120107118	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST4	23522	broad.mit.edu	37	10	76789167	76789167	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1926362	1926362	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1L	23040	broad.mit.edu	37	2	1926736	1926736	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
N6AMT1	29104	broad.mit.edu	37	21	30260256	30260256	+	5'Flank	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89885563	89885563	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101726892	101726892	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101756713	101756713	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	102030993	102030993	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78334814	78334814	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78513135	78513135	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15542243	15542243	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	36202313	36202313	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16895686	16895686	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144816373	144816373	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM1	4684	broad.mit.edu	37	11	113102576	113102576	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM1	4684	broad.mit.edu	37	11	113133594	113133594	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM1	4684	broad.mit.edu	37	11	113133596	113133596	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM2	4685	broad.mit.edu	37	21	22910112	22910112	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133668778	133668778	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR1	9611	broad.mit.edu	37	17	16004785	16004785	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCS1	23413	broad.mit.edu	37	9	132982036	132982036	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDE1	54820	broad.mit.edu	37	16	15785066	15785066	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA13	51079	broad.mit.edu	37	19	19645921	19645921	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA8	4702	broad.mit.edu	37	9	124910549	124910550	+	Nonsense_Mutation	DNP	TT	AG	AG			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFB2	4708	broad.mit.edu	37	7	140402552	140402552	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB1	64168	broad.mit.edu	37	8	91967707	91967707	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB2	54550	broad.mit.edu	37	16	84028176	84028176	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAP1	25977	broad.mit.edu	37	12	8245640	8245640	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4L	23327	broad.mit.edu	37	18	55989597	55989597	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL2	4753	broad.mit.edu	37	12	44915987	44915987	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29647378	29647378	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29670033	29670033	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC1	4772	broad.mit.edu	37	18	77208722	77208722	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFXL1	152518	broad.mit.edu	37	4	47864702	47864702	+	Intron	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLN	57486	broad.mit.edu	37	5	65108279	65108279	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP11	204801	broad.mit.edu	37	19	56320398	56320398	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56382348	56382348	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP5	126206	broad.mit.edu	37	19	56539670	56539670	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMNAT2	23057	broad.mit.edu	37	1	183221975	183221975	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOP56	10528	broad.mit.edu	37	20	2635347	2635347	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117768666	117768666	+	Missense_Mutation	SNP	C	T	T	rs74738204		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS3	4846	broad.mit.edu	37	7	150704098	150704098	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2NL	388677	broad.mit.edu	37	1	145273425	145273425	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120459031	120459031	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH2	4853	broad.mit.edu	37	1	120512153	120512153	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32178753	32178753	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX3	50508	broad.mit.edu	37	6	155743748	155743748	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX5	79400	broad.mit.edu	37	15	69320705	69320705	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX5	79400	broad.mit.edu	37	15	69339750	69339750	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPEPPS	9520	broad.mit.edu	37	17	45691032	45691032	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP1	4867	broad.mit.edu	37	2	110937164	110937164	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP4	261734	broad.mit.edu	37	1	5933436	5933436	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY5R	4889	broad.mit.edu	37	4	164272464	164272464	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2E1	7101	broad.mit.edu	37	6	108502825	108502825	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115406740	115406740	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	83635474	83635474	+	Missense_Mutation	SNP	G	T	T	rs147736439	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRIP3	56675	broad.mit.edu	37	11	9005043	9005043	+	3'UTR	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRN1L	123904	broad.mit.edu	37	16	67919987	67919987	+	Missense_Mutation	SNP	C	A	A	rs114883420	byFrequency;by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50847353	50847353	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79117753	79117753	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN3	63899	broad.mit.edu	37	3	93802949	93802949	+	Splice_Site	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTN3	4917	broad.mit.edu	37	16	2522401	2522401	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK1	4914	broad.mit.edu	37	1	156846229	156846230	+	Missense_Mutation	DNP	TC	AT	AT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87366928	87366928	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88679282	88679282	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUDT3	11165	broad.mit.edu	37	6	34360149	34360149	+	5'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUF2	83540	broad.mit.edu	37	1	163297403	163297403	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUMB	8650	broad.mit.edu	37	14	73754027	73754027	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP54	53371	broad.mit.edu	37	4	77065569	77065569	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP85	79902	broad.mit.edu	37	17	73222031	73222031	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NWD1	284434	broad.mit.edu	37	19	16910855	16910855	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102343812	102343812	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF4	55999	broad.mit.edu	37	X	101818366	101818366	+	RNA	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBFC1	79991	broad.mit.edu	37	10	105642415	105642415	+	3'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBP2A	29991	broad.mit.edu	37	9	138440492	138440492	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228495862	228495862	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123838841	123838841	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78412999	78412999	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRL1	4987	broad.mit.edu	37	20	62729793	62729793	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10A2	341276	broad.mit.edu	37	11	6891129	6891129	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10C1	442194	broad.mit.edu	37	6	29408120	29408120	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G4	390264	broad.mit.edu	37	11	123887059	123887059	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G9	219870	broad.mit.edu	37	11	123893753	123893753	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10H4	126541	broad.mit.edu	37	19	16060501	16060501	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10T2	128360	broad.mit.edu	37	1	158368994	158368994	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13D1	286365	broad.mit.edu	37	9	107457137	107457137	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1L6	392390	broad.mit.edu	37	9	125512544	125512544	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2AE1	81392	broad.mit.edu	37	7	99474611	99474611	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2D2	120776	broad.mit.edu	37	11	6913519	6913519	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2H1	26716	broad.mit.edu	37	6	29429580	29429580	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2H1	26716	broad.mit.edu	37	6	29429884	29429884	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T11	127077	broad.mit.edu	37	1	248789921	248789921	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T33	391195	broad.mit.edu	37	1	248436683	248436683	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T34	127068	broad.mit.edu	37	1	248738024	248738024	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A16	81327	broad.mit.edu	37	11	55111056	55111056	+	Missense_Mutation	SNP	C	A	A	rs144905099	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D6	219983	broad.mit.edu	37	11	59224956	59224956	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K13	390433	broad.mit.edu	37	14	20502628	20502628	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K15	81127	broad.mit.edu	37	14	20444601	20444601	+	Silent	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N3P	390539	broad.mit.edu	37	15	22413515	22413515	+	5'Flank	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4Q3	441669	broad.mit.edu	37	14	20216317	20216317	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51B4	79339	broad.mit.edu	37	11	5322428	5322428	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51I1	390063	broad.mit.edu	37	11	5462321	5462321	+	Missense_Mutation	SNP	G	T	T	rs141201376		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51M1	390059	broad.mit.edu	37	11	5411240	5411240	+	Silent	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51V1	283111	broad.mit.edu	37	11	5220986	5220986	+	Silent	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51V1	283111	broad.mit.edu	37	11	5221848	5221848	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52A5	390054	broad.mit.edu	37	11	5153245	5153246	+	Silent	DNP	GG	AT	AT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52B4	143496	broad.mit.edu	37	11	4389127	4389127	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52E4	390081	broad.mit.edu	37	11	5905568	5905568	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52E6	390078	broad.mit.edu	37	11	5862468	5862468	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52K2	119774	broad.mit.edu	37	11	4470543	4470543	+	5'Flank	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N1	79473	broad.mit.edu	37	11	5809676	5809676	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N4	390072	broad.mit.edu	37	11	5776426	5776426	+	Silent	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52R1	119695	broad.mit.edu	37	11	4825053	4825053	+	Silent	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A4	120793	broad.mit.edu	37	11	6024334	6024334	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B21	219968	broad.mit.edu	37	11	58275424	58275424	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H15	403274	broad.mit.edu	37	3	97887750	97887750	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5H15	403274	broad.mit.edu	37	3	97888436	97888436	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5I1	10798	broad.mit.edu	37	11	55703186	55703186	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K4	403278	broad.mit.edu	37	3	98072782	98072782	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6A2	8590	broad.mit.edu	37	11	6816949	6816949	+	5'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6B2	389090	broad.mit.edu	37	2	240969526	240969526	+	Silent	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C2	341416	broad.mit.edu	37	12	55846199	55846199	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K3	391114	broad.mit.edu	37	1	158687521	158687521	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6Q1	219952	broad.mit.edu	37	11	57799360	57799360	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7A10	390892	broad.mit.edu	37	19	14952214	14952214	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ORC3L	23595	broad.mit.edu	37	6	88311462	88311463	+	Intron	DNP	AT	TA	TA			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL8	114882	broad.mit.edu	37	12	76853519	76853519	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26695258	26695258	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RX2	22953	broad.mit.edu	37	12	133196907	133196907	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAAF1	80227	broad.mit.edu	37	11	73620586	73620586	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAIP2B	400961	broad.mit.edu	37	2	71429602	71429602	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK7	57144	broad.mit.edu	37	20	9546931	9546931	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAMR1	25891	broad.mit.edu	37	11	35454105	35454105	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176525883	176525883	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176679222	176679222	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	161780910	161780910	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARK2	5071	broad.mit.edu	37	6	162475170	162475170	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARN	5073	broad.mit.edu	37	16	14540932	14540932	+	Silent	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP6	56965	broad.mit.edu	37	15	72533888	72533888	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARVB	29780	broad.mit.edu	37	22	44547345	44547345	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX3	5077	broad.mit.edu	37	2	223158868	223158868	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91090850	91090850	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56367780	56367780	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH18	54510	broad.mit.edu	37	4	138451465	138451465	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA10	56139	broad.mit.edu	37	5	140237074	140237074	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA11	56138	broad.mit.edu	37	5	140250183	140250183	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140256515	140256515	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB10	56126	broad.mit.edu	37	5	140574115	140574115	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB10	56126	broad.mit.edu	37	5	140574131	140574131	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB11	56125	broad.mit.edu	37	5	140579376	140579376	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB3	56102	broad.mit.edu	37	5	140750198	140750198	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCF11	51585	broad.mit.edu	37	11	82880813	82880813	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCGF5	84333	broad.mit.edu	37	10	93024135	93024135	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82585417	82585417	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82595231	82595231	+	Silent	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCMTD1	115294	broad.mit.edu	37	8	52732947	52732947	+	Silent	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47773118	47773118	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNT	5116	broad.mit.edu	37	21	47819700	47819700	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNX	22990	broad.mit.edu	37	14	71570410	71570410	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYT1A	5130	broad.mit.edu	37	3	195968943	195968943	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCL2	132954	broad.mit.edu	37	4	56447105	56447105	+	Intron	SNP	C	A	A	rs28683692	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165746507	165746507	+	3'UTR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE10A	10846	broad.mit.edu	37	6	165801929	165801929	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178704964	178704965	+	Intron	DNP	GG	TT	TT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4B	5142	broad.mit.edu	37	1	66458629	66458629	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6B	5158	broad.mit.edu	37	4	650004	650004	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6H	5149	broad.mit.edu	37	12	15130908	15130909	+	5'UTR	DNP	GG	TT	TT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFD	80310	broad.mit.edu	37	11	103780655	103780655	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHA1	5160	broad.mit.edu	37	X	19375768	19375768	+	Splice_Site	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA4	9601	broad.mit.edu	37	7	148701310	148701310	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDILT	204474	broad.mit.edu	37	16	20373850	20373850	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDILT	204474	broad.mit.edu	37	16	20410372	20410372	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDYN	5173	broad.mit.edu	37	20	1961039	1961039	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57326145	57326145	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEG3	5178	broad.mit.edu	37	19	57327947	57327947	+	Silent	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI3	246330	broad.mit.edu	37	11	66235598	66235598	+	Splice_Site	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER2	8864	broad.mit.edu	37	2	239171018	239171018	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179592122	179592122	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5	5830	broad.mit.edu	37	12	7360450	7360450	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5	5830	broad.mit.edu	37	12	7361763	7361763	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX7	5191	broad.mit.edu	37	6	137146273	137146273	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGBD3	267004	broad.mit.edu	37	10	50724809	50724809	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM2L1	283209	broad.mit.edu	37	11	74053997	74053997	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM2	55276	broad.mit.edu	37	4	37848688	37848688	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGM5	5239	broad.mit.edu	37	9	71006459	71006459	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58348258	58348258	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22065243	22065243	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22095522	22095522	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF16	9767	broad.mit.edu	37	X	46845161	46845161	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF21B	112885	broad.mit.edu	37	22	45312564	45312564	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKG1	5260	broad.mit.edu	37	7	56151240	56151240	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDA3	23612	broad.mit.edu	37	1	201437670	201437670	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB2	90102	broad.mit.edu	37	3	111603652	111603652	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB2	90102	broad.mit.edu	37	3	111686524	111686524	+	Splice_Site	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60506065	60506065	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHRF1	57661	broad.mit.edu	37	11	607393	607393	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHYHIP	9796	broad.mit.edu	37	8	22079339	22079339	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI16	221476	broad.mit.edu	37	6	36930959	36930959	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R6	146850	broad.mit.edu	37	17	8731893	8731893	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209188940	209188940	+	Silent	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKLR	5313	broad.mit.edu	37	1	155261544	155261544	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP2	5318	broad.mit.edu	37	12	33021744	33021744	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159519520	159519520	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAC1L	219990	broad.mit.edu	37	11	59814578	59814579	+	3'UTR	INS	-	TT	TT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9352970	9352970	+	Silent	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9368109	9368109	+	Splice_Site	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCD3	113026	broad.mit.edu	37	17	43196463	43196463	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD5	200150	broad.mit.edu	37	1	242264009	242264009	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD6	201164	broad.mit.edu	37	17	17106395	17106395	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH1	57475	broad.mit.edu	37	14	68028670	68028670	+	Splice_Site	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEK	5341	broad.mit.edu	37	2	68607891	68607891	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLGLA	285189	broad.mit.edu	37	2	107003913	107003913	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLK1	5347	broad.mit.edu	37	16	23690774	23690774	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA2	5362	broad.mit.edu	37	1	208234017	208234017	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP1	5407	broad.mit.edu	37	10	118359482	118359482	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118199317	118199317	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118199421	118199421	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA5	150379	broad.mit.edu	37	22	44280245	44280245	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA7	375775	broad.mit.edu	37	9	140400281	140400281	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POC1A	25886	broad.mit.edu	37	3	52159198	52159198	+	Splice_Site	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POC1B	282809	broad.mit.edu	37	12	89896389	89896389	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1B	84172	broad.mit.edu	37	2	113305054	113305055	+	Frame_Shift_Ins	INS	-	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2A	5430	broad.mit.edu	37	17	7405145	7405146	+	Intron	INS	-	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53104302	53104302	+	3'UTR	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38138549	38138549	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38151900	38151900	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEC	388468	broad.mit.edu	37	18	14513950	14513950	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEG	404785	broad.mit.edu	37	14	19553761	19553761	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU3F4	5456	broad.mit.edu	37	X	82764135	82764135	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAPDC1A	196051	broad.mit.edu	37	10	122263398	122263398	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPL	5493	broad.mit.edu	37	16	4934045	4934045	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1L	151742	broad.mit.edu	37	3	160783209	160783209	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R13B	23368	broad.mit.edu	37	14	104220583	104220583	+	Splice_Site	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R15A	23645	broad.mit.edu	37	19	49378083	49378083	+	Silent	SNP	G	T	T	rs138580661		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3A	5506	broad.mit.edu	37	7	113517986	113517986	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R4	5524	broad.mit.edu	37	9	131873298	131873298	+	5'Flank	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R4	57718	broad.mit.edu	37	14	94640768	94640768	+	5'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPRC1	23082	broad.mit.edu	37	10	103906712	103906712	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF1	65121	broad.mit.edu	37	1	12853569	12853569	+	Missense_Mutation	SNP	C	A	A	rs138008515		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRCP	5547	broad.mit.edu	37	11	82571045	82571045	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM15	63977	broad.mit.edu	37	21	43287255	43287258	+	Intron	DEL	CTCA	-	-	rs3833356		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23522322	23522322	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47364366	47364366	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX2	80243	broad.mit.edu	37	8	69104502	69104502	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	23847586	23847586	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCI	5584	broad.mit.edu	37	3	170002369	170002369	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT3	10196	broad.mit.edu	37	11	20414666	20414666	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT8	56341	broad.mit.edu	37	12	3701483	3701483	+	Frame_Shift_Del	DEL	G	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM2	150696	broad.mit.edu	37	2	95953846	95953846	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROS1	5627	broad.mit.edu	37	3	93619732	93619732	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF18	8559	broad.mit.edu	37	10	13629019	13629019	+	5'UTR	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS27	83886	broad.mit.edu	37	16	2766520	2766520	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS38	339501	broad.mit.edu	37	1	228003815	228003815	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS38	339501	broad.mit.edu	37	1	228003884	228003884	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43348325	43348325	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43352055	43352055	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43352070	43352070	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43352145	43352145	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43352204	43352204	+	Intron	SNP	C	T	T	rs146145281	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG1	5669	broad.mit.edu	37	19	43352359	43352359	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG2	5670	broad.mit.edu	37	19	43576039	43576039	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG5	5673	broad.mit.edu	37	19	43683108	43683108	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG5	5673	broad.mit.edu	37	19	43683120	43683120	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43414865	43414865	+	Missense_Mutation	SNP	C	G	G	rs1058688		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43520004	43520004	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43579858	43579858	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43583712	43583712	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43600834	43600834	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG9	5678	broad.mit.edu	37	19	43763273	43763273	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMC6	5706	broad.mit.edu	37	14	53175554	53175554	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMD5	5711	broad.mit.edu	37	9	123589225	123589225	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSME4	23198	broad.mit.edu	37	2	54122796	54122796	+	Missense_Mutation	SNP	T	C	C	rs139295214		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTBP1	5725	broad.mit.edu	37	19	807774	807774	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTENP1	11191	broad.mit.edu	37	9	33676715	33676715	+	5'UTR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGS2	5743	broad.mit.edu	37	1	186643804	186643804	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGS2	5743	broad.mit.edu	37	1	186646911	186646911	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209307110	209307110	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN11	5781	broad.mit.edu	37	12	112883986	112883986	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN21	11099	broad.mit.edu	37	14	88940125	88940125	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18750419	18750419	+	3'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18762209	18762209	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18765021	18765021	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRB	5787	broad.mit.edu	37	12	70928675	70928675	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8331607	8331607	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8528584	8528584	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRH	5794	broad.mit.edu	37	19	55715354	55715354	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRJ	5795	broad.mit.edu	37	11	48181433	48181433	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220164863	220164863	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRO	5800	broad.mit.edu	37	12	15718719	15718719	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRS	5802	broad.mit.edu	37	19	5206810	5206810	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRS	5802	broad.mit.edu	37	19	5244311	5244311	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121701105	121701105	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXMP4	11264	broad.mit.edu	37	20	32298426	32298426	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB11FIP5	26056	broad.mit.edu	37	2	73315269	73315269	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB15	376267	broad.mit.edu	37	14	65419249	65419249	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB31	11031	broad.mit.edu	37	18	9775294	9775294	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB37	326624	broad.mit.edu	37	17	72739292	72739292	+	Missense_Mutation	SNP	C	T	T	rs148960641		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174244990	174244990	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174274250	174274250	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RACGAP1	29127	broad.mit.edu	37	12	50388297	50388297	+	Intron	DEL	A	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GDS1	5910	broad.mit.edu	37	4	99300218	99300218	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GDS1	5910	broad.mit.edu	37	4	99341260	99341260	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF6	51735	broad.mit.edu	37	5	130845995	130845995	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF1	5923	broad.mit.edu	37	15	79312551	79312551	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRP2	10235	broad.mit.edu	37	11	64502896	64502896	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM10	8241	broad.mit.edu	37	X	47034444	47034444	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM19	9904	broad.mit.edu	37	12	114397086	114397086	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM25	58517	broad.mit.edu	37	14	73554749	73554749	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM44	375316	broad.mit.edu	37	2	238726120	238726120	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP3	5949	broad.mit.edu	37	10	48387913	48387913	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECQL5	9400	broad.mit.edu	37	17	73627074	73627074	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79348489	79348489	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1A	5967	broad.mit.edu	37	2	79349013	79349013	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3G	130120	broad.mit.edu	37	2	79255376	79255376	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103136362	103136362	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERE	473	broad.mit.edu	37	1	8568612	8568612	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV3L	5980	broad.mit.edu	37	6	111751002	111751002	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFTN2	130132	broad.mit.edu	37	2	198436887	198436887	+	Missense_Mutation	SNP	G	T	T	rs138418206		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFTN2	130132	broad.mit.edu	37	2	198511068	198511068	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX5	5993	broad.mit.edu	37	1	151314798	151314798	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX5	5993	broad.mit.edu	37	1	151314850	151314850	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGAG1	57529	broad.mit.edu	37	X	109694214	109694214	+	Silent	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD3	653489	broad.mit.edu	37	2	107084626	107084626	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS12	6002	broad.mit.edu	37	4	3418612	3418612	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS18	64407	broad.mit.edu	37	1	192150570	192150570	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS20	8601	broad.mit.edu	37	8	54764607	54764607	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241094014	241094014	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241099998	241099998	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS7	6000	broad.mit.edu	37	1	241161741	241161741	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIBC1	158787	broad.mit.edu	37	X	53453249	53453249	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130907029	130907029	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS1	22999	broad.mit.edu	37	6	72806789	72806789	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104664378	104664378	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105026023	105026023	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLTPR	146206	broad.mit.edu	37	16	67690054	67690054	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMST	196475	broad.mit.edu	37	12	97885670	97885670	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE10	338879	broad.mit.edu	37	14	20979141	20979141	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE2	6036	broad.mit.edu	37	14	21424061	21424061	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEN	29102	broad.mit.edu	37	5	31529071	31529071	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF141	50862	broad.mit.edu	37	11	10540598	10540598	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF144A	9781	broad.mit.edu	37	2	7154848	7154848	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF150	57484	broad.mit.edu	37	4	141889041	141889041	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF160	26046	broad.mit.edu	37	21	30315514	30315514	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF5P1	286140	broad.mit.edu	37	8	38458585	38458585	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNPS1	10921	broad.mit.edu	37	16	2312759	2312759	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	78717633	78717633	+	Splice_Site	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RORB	6096	broad.mit.edu	37	9	77275585	77275585	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10468347	10468347	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10470559	10470559	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10480731	10480731	+	Splice_Site	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1	6101	broad.mit.edu	37	8	55541512	55541512	+	Silent	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGRIP1L	23322	broad.mit.edu	37	16	53691404	53691404	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS13	6207	broad.mit.edu	37	11	17097027	17097027	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS27A	6233	broad.mit.edu	37	2	55462538	55462538	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KA3	6197	broad.mit.edu	37	X	20222059	20222059	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP12	23223	broad.mit.edu	37	10	99138990	99138990	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTCD1	8634	broad.mit.edu	37	1	100746894	100746894	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67871251	67871251	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	92998350	92998350	+	Splice_Site	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	92999102	92999102	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUNX1T1	862	broad.mit.edu	37	8	93023247	93023247	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237608946	237608946	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237880516	237880516	+	Nonsense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237906878	237906878	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237993983	237993983	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33941532	33941532	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	34146975	34146975	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACM1L	22908	broad.mit.edu	37	3	45763598	45763598	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL2	6297	broad.mit.edu	37	14	21992261	21992261	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL3	27164	broad.mit.edu	37	18	76754668	76754668	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP30BP	29115	broad.mit.edu	37	17	73663513	73663513	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP30BP	29115	broad.mit.edu	37	17	73663574	73663574	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SASS6	163786	broad.mit.edu	37	1	100568609	100568609	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATL1	340562	broad.mit.edu	37	X	84362524	84362524	+	Missense_Mutation	SNP	G	T	T	rs146269642		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAND3	114821	broad.mit.edu	37	6	28539729	28539729	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCMH1	22955	broad.mit.edu	37	1	41514592	41514592	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNN1A	6337	broad.mit.edu	37	12	6465099	6465099	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN2	90507	broad.mit.edu	37	17	45915787	45915787	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE1	80274	broad.mit.edu	37	22	43654159	43654160	+	Intron	DNP	GG	TT	TT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE2	57758	broad.mit.edu	37	11	9081067	9081067	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCUBE3	222663	broad.mit.edu	37	6	35205485	35205485	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDC1	6382	broad.mit.edu	37	2	20405078	20405078	+	Intron	DEL	G	-	-	rs74334882	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG8	10806	broad.mit.edu	37	1	243419402	243419402	+	5'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4215484	4215484	+	Intron	SNP	G	T	T	rs140943909	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31A	22872	broad.mit.edu	37	4	83795890	83795890	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC61A2	55176	broad.mit.edu	37	10	12185050	12185050	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC61A2	55176	broad.mit.edu	37	10	12185210	12185210	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC61A2	55176	broad.mit.edu	37	10	12198911	12198911	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SECISBP2	79048	broad.mit.edu	37	9	91943726	91943726	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEL1L2	80343	broad.mit.edu	37	20	13830992	13830992	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELP	6403	broad.mit.edu	37	1	169560754	169560754	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9054073	9054073	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9108268	9108268	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT14	346288	broad.mit.edu	37	7	55874935	55874935	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT4	5414	broad.mit.edu	37	17	56602523	56602523	+	Missense_Mutation	SNP	A	G	G	rs112657072		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA6	866	broad.mit.edu	37	14	94780726	94780726	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB2	5055	broad.mit.edu	37	18	61562575	61562575	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB4	6318	broad.mit.edu	37	18	61326698	61326698	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESTD1	91404	broad.mit.edu	37	2	179986599	179986599	+	Missense_Mutation	SNP	T	A	A	rs146149735	byFrequency	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETDB1	9869	broad.mit.edu	37	1	150919302	150919302	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6	124925	broad.mit.edu	37	17	27308745	27308745	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7269847	7269847	+	Silent	SNP	C	A	A	rs143424241		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPC	6440	broad.mit.edu	37	8	22019268	22019268	+	5'UTR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGCZ	137868	broad.mit.edu	37	8	14166485	14166485	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGEF	26084	broad.mit.edu	37	3	153840368	153840368	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK1	6446	broad.mit.edu	37	6	134618282	134618282	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK1	6446	broad.mit.edu	37	6	134619639	134619639	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGSM2	9905	broad.mit.edu	37	17	2265147	2265147	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK2	22941	broad.mit.edu	37	11	70319477	70319477	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK2	22941	broad.mit.edu	37	11	70507709	70507709	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHC3	53358	broad.mit.edu	37	9	91727548	91727548	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC14	100049587	broad.mit.edu	37	19	52147104	52147104	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51960729	51960729	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIM1	6492	broad.mit.edu	37	6	100838170	100838170	+	3'UTR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIM1	6492	broad.mit.edu	37	6	100901733	100901733	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L1	26037	broad.mit.edu	37	14	72176331	72176331	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164710115	164710115	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164786924	164786924	+	Missense_Mutation	SNP	C	A	A	rs138564183		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKAP1	8631	broad.mit.edu	37	17	46247888	46247888	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L	6499	broad.mit.edu	37	6	31933555	31933555	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKIV2L	6499	broad.mit.edu	37	6	31935478	31935478	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103698485	103698485	+	Nonstop_Mutation	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A1	6561	broad.mit.edu	37	7	122811981	122811981	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A5	284111	broad.mit.edu	37	17	6591060	6591060	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A2	10246	broad.mit.edu	37	6	25921630	25921630	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A9	63910	broad.mit.edu	37	20	61597757	61597757	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A1	6570	broad.mit.edu	37	8	20004891	20004891	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A2	6571	broad.mit.edu	37	10	119012872	119012872	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC18A3	6572	broad.mit.edu	37	10	50820453	50820453	+	3'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36677263	36677263	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36686153	36686153	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A13	9390	broad.mit.edu	37	3	38307747	38307747	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC24A2	25769	broad.mit.edu	37	9	19785893	19785893	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A12	8604	broad.mit.edu	37	2	172644379	172644379	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A13	10165	broad.mit.edu	37	7	95906671	95906671	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107418628	107418628	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107427426	107427426	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92301241	92301241	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92352651	92352651	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92375833	92375833	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A9	115019	broad.mit.edu	37	1	205902067	205902067	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC29A1	2030	broad.mit.edu	37	6	44197570	44197570	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A5	64924	broad.mit.edu	37	5	68396736	68396736	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC32A1	140679	broad.mit.edu	37	20	37357066	37357066	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC39A12	221074	broad.mit.edu	37	10	18292251	18292251	+	Silent	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A2	84102	broad.mit.edu	37	12	105238410	105238410	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC43A3	29015	broad.mit.edu	37	11	57193675	57193675	+	5'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108126844	108126844	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75699662	75699662	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33947283	33947283	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC46A2	57864	broad.mit.edu	37	9	115648836	115648836	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42337925	42337925	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72400178	72400178	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A12	159963	broad.mit.edu	37	11	26702709	26702709	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A18	348932	broad.mit.edu	37	5	1245997	1245997	+	Missense_Mutation	SNP	C	T	T	rs75499032	byFrequency;by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1212464	1212464	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A10	285335	broad.mit.edu	37	3	111860042	111860042	+	3'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A10	285335	broad.mit.edu	37	3	111962757	111962757	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A2	6549	broad.mit.edu	37	2	103299662	103299662	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A8	23315	broad.mit.edu	37	20	48471964	48471964	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A9	285195	broad.mit.edu	37	3	143223110	143223110	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN11	91607	broad.mit.edu	37	17	33687322	33687322	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFN12L	342615	broad.mit.edu	37	17	33825659	33825659	+	Intron	DEL	C	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK6	84189	broad.mit.edu	37	13	86369524	86369524	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAD1	56916	broad.mit.edu	37	4	95195932	95195932	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMCHD1	23347	broad.mit.edu	37	18	2674057	2674057	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156237153	156237153	+	Intron	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD4	55627	broad.mit.edu	37	2	130930350	130930350	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP25	6616	broad.mit.edu	37	20	10286857	10286857	+	3'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25310255	25310255	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPD2	6633	broad.mit.edu	37	19	46195106	46195106	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51569419	51569419	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51617038	51617038	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOBP	55084	broad.mit.edu	37	6	107956574	107956574	+	Silent	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOLH	6650	broad.mit.edu	37	16	601110	601110	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORBS2	8470	broad.mit.edu	37	4	186578535	186578535	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108338837	108338837	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108427397	108427397	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106802766	106802766	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORL1	6653	broad.mit.edu	37	11	121393466	121393466	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOST	50964	broad.mit.edu	37	17	41832830	41832830	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	24102629	24102629	+	5'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG1	6674	broad.mit.edu	37	8	101174537	101174537	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA1	64173	broad.mit.edu	37	1	85029554	85029554	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA22	84690	broad.mit.edu	37	17	3397854	3397854	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDEF	25803	broad.mit.edu	37	6	34507012	34507012	+	Intron	DEL	G	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE5	442590	broad.mit.edu	37	7	75130743	75130743	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228846568	228846568	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPNS3	201305	broad.mit.edu	37	17	4349344	4349344	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPO11	23626	broad.mit.edu	37	20	55909776	55909776	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR1B	6699	broad.mit.edu	37	1	153004868	153004868	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR2B	6701	broad.mit.edu	37	1	153043118	153043118	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55648775	55648775	+	5'Flank	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158597410	158597410	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158604298	158604298	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158612255	158612255	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158612641	158612641	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158618322	158618322	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158621341	158621341	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158623071	158623071	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158623307	158623307	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158637767	158637767	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158644316	158644316	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54876661	54876661	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPZ1	84654	broad.mit.edu	37	5	79616044	79616044	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRBD1	55133	broad.mit.edu	37	2	45619977	45619977	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRCRB4D	136853	broad.mit.edu	37	7	76019342	76019342	+	3'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149495280	149495280	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST3GAL1	6482	broad.mit.edu	37	8	134472025	134472025	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAC2	342667	broad.mit.edu	37	17	37371347	37371348	+	Intron	INS	-	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAC	6769	broad.mit.edu	37	3	36485037	36485037	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3L4	64940	broad.mit.edu	37	7	66784986	66784986	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33703295	33703295	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT5A	6776	broad.mit.edu	37	17	40452733	40452733	+	Nonsense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STC2	8614	broad.mit.edu	37	5	172750445	172750445	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK10	6793	broad.mit.edu	37	5	171488231	171488231	+	Silent	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK11IP	114790	broad.mit.edu	37	2	220473845	220473845	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK11IP	114790	broad.mit.edu	37	2	220477938	220477938	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23823298	23823298	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRAP	11171	broad.mit.edu	37	12	16052990	16052990	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STT3A	3703	broad.mit.edu	37	11	125467107	125467107	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP1	6812	broad.mit.edu	37	9	130442361	130442361	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP1	6812	broad.mit.edu	37	9	130442371	130442371	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5L	9515	broad.mit.edu	37	3	120840407	120840407	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUMF1	285362	broad.mit.edu	37	3	4459502	4459502	+	Intron	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SURF6	6838	broad.mit.edu	37	9	136199369	136199369	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2C	22987	broad.mit.edu	37	5	75469877	75469877	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2C	22987	broad.mit.edu	37	5	75591497	75591497	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYDE2	84144	broad.mit.edu	37	1	85666082	85666082	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152545687	152545687	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152640026	152640026	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152804077	152804077	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT13	57586	broad.mit.edu	37	11	45307615	45307615	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7324168	7324168	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACC1	6867	broad.mit.edu	37	8	38646312	38646312	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF15	8148	broad.mit.edu	37	17	34151074	34151074	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1B	9014	broad.mit.edu	37	2	9991596	9991596	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4B	6875	broad.mit.edu	37	18	23845200	23845200	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4B	6875	broad.mit.edu	37	18	23906843	23906843	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAOK3	51347	broad.mit.edu	37	12	118684080	118684080	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D21	161514	broad.mit.edu	37	15	74180809	74180809	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8B	54885	broad.mit.edu	37	X	106083826	106083826	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D9	23158	broad.mit.edu	37	4	141543672	141543672	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBPL2	387332	broad.mit.edu	37	14	55906968	55906968	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85446986	85446987	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85469919	85469919	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX4	9496	broad.mit.edu	37	17	59556126	59556126	+	Missense_Mutation	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF25	22980	broad.mit.edu	37	16	89958629	89958629	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCHHL1	126637	broad.mit.edu	37	1	152057310	152057310	+	3'UTR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD9	122402	broad.mit.edu	37	14	104491050	104491050	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56676440	56676440	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30695587	30695587	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP4	7023	broad.mit.edu	37	16	4310163	4310163	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM3	7053	broad.mit.edu	37	20	2291164	2291164	+	Intron	SNP	A	T	T	rs147528838	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133898771	133898772	+	Missense_Mutation	DNP	AG	TA	TA			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133925400	133925400	+	Missense_Mutation	SNP	G	T	T	rs146594373		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THBS2	7058	broad.mit.edu	37	6	169622523	169622523	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TH	7054	broad.mit.edu	37	11	2192844	2192845	+	Intron	DNP	AG	CT	CT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TINF2	26277	broad.mit.edu	37	14	24709282	24709282	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLK1	9874	broad.mit.edu	37	2	172016919	172016919	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166924717	166924717	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98192713	98192713	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120474743	120474743	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM9SF4	9777	broad.mit.edu	37	20	30753088	30753088	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMBIM6	7009	broad.mit.edu	37	12	50146437	50146437	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM116	89894	broad.mit.edu	37	12	112369362	112369362	+	3'UTR	SNP	A	T	T	rs112564343		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM143	55260	broad.mit.edu	37	19	48845894	48845894	+	Missense_Mutation	SNP	C	A	A	rs148331223		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM144	55314	broad.mit.edu	37	4	159158747	159158747	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM169	92691	broad.mit.edu	37	2	216960771	216960771	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM176A	55365	broad.mit.edu	37	7	150501975	150501975	+	3'UTR	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM180	79847	broad.mit.edu	37	10	104233400	104233400	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM182	130827	broad.mit.edu	37	2	103414427	103414427	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM225	338661	broad.mit.edu	37	11	123755312	123755312	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM38A	79041	broad.mit.edu	37	19	16799110	16799110	+	Silent	SNP	G	A	A	rs142098397		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMOD1	7111	broad.mit.edu	37	9	100315698	100315699	+	Intron	DNP	GG	TT	TT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS7	344805	broad.mit.edu	37	3	111769716	111769716	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29670309	29670309	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMUB2	79089	broad.mit.edu	37	17	42267771	42267771	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF13B	23495	broad.mit.edu	37	17	16855818	16855818	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNP1	7141	broad.mit.edu	37	2	217724871	217724871	+	5'Flank	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175355157	175355157	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS1	7145	broad.mit.edu	37	2	218695090	218695090	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOM1L1	10040	broad.mit.edu	37	17	52990037	52990038	+	Frame_Shift_Del	DEL	TG	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM40L	84134	broad.mit.edu	37	1	161198067	161198067	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53I11	9537	broad.mit.edu	37	11	44959781	44959781	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7578268	7578268	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH2	121278	broad.mit.edu	37	12	72335436	72335436	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144345052	144345052	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPST2	8459	broad.mit.edu	37	22	26937214	26937214	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10914519	10914519	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF3IP1	26146	broad.mit.edu	37	2	239237850	239237850	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC9	83696	broad.mit.edu	37	8	141262976	141262976	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREML4	285852	broad.mit.edu	37	6	41204200	41204200	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM11	81559	broad.mit.edu	37	1	228589735	228589735	+	Intron	DEL	C	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM17	51127	broad.mit.edu	37	1	228595873	228595873	+	3'UTR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM27	5987	broad.mit.edu	37	6	28872184	28872184	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM40	135644	broad.mit.edu	37	6	30105048	30105048	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM42	287015	broad.mit.edu	37	3	140407476	140407476	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM60	166655	broad.mit.edu	37	4	165961467	165961467	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14387461	14387461	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TROVE2	6738	broad.mit.edu	37	1	193029186	193029186	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101347344	101347344	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142625146	142625146	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142626068	142626068	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV6	55503	broad.mit.edu	37	7	142572149	142572149	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98508734	98508734	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98562188	98562188	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC2	7249	broad.mit.edu	37	16	2110757	2110757	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSEN2	80746	broad.mit.edu	37	3	12560662	12560662	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSGA10IP	254187	broad.mit.edu	37	11	65721189	65721189	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81609827	81609827	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31770676	31770677	+	Intron	DNP	GG	TT	TT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNARE1	203062	broad.mit.edu	37	8	143435962	143435962	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC16	158248	broad.mit.edu	37	9	130479240	130479240	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21B	79809	broad.mit.edu	37	2	166767876	166767876	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7B	145567	broad.mit.edu	37	14	91059911	91059911	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL7	79739	broad.mit.edu	37	1	84385411	84385411	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179411926	179411926	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179463212	179463212	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179473797	179473797	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179528792	179528792	+	Frame_Shift_Del	DEL	T	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179584928	179584928	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179594626	179594626	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179597036	179597036	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179611894	179611894	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179615813	179615813	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH1	57348	broad.mit.edu	37	19	54941975	54941975	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA3D	113457	broad.mit.edu	37	2	132235960	132235960	+	Splice_Site	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB3	10381	broad.mit.edu	37	16	90001147	90001147	+	Silent	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4Q	56604	broad.mit.edu	37	4	190905503	190905504	+	Missense_Mutation	DNP	GG	TT	TT	rs61746584		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUT1	64852	broad.mit.edu	37	11	62346149	62346149	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUT1	64852	broad.mit.edu	37	11	62348608	62348608	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYRO3	7301	broad.mit.edu	37	15	41870231	41870231	+	Silent	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBASH3A	53347	broad.mit.edu	37	21	43838595	43838595	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2MP1	606551	broad.mit.edu	37	16	34404608	34404608	+	RNA	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4B	10277	broad.mit.edu	37	1	10197324	10197324	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42613255	42613255	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42625764	42625764	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19503937	19503937	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR7	55148	broad.mit.edu	37	14	93685569	93685569	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UEVLD	55293	broad.mit.edu	37	11	18596857	18596857	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGCG	7357	broad.mit.edu	37	9	114676855	114676855	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT1	56886	broad.mit.edu	37	2	128936041	128936041	+	Splice_Site	DEL	G	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A1	54658	broad.mit.edu	37	2	234669362	234669362	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A7	54577	broad.mit.edu	37	2	234591242	234591242	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A9	54600	broad.mit.edu	37	2	234581233	234581233	+	Nonsense_Mutation	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B10	7365	broad.mit.edu	37	4	69692215	69692215	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B7	7364	broad.mit.edu	37	4	69968459	69968459	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK1	8408	broad.mit.edu	37	12	132400970	132400970	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41953149	41953149	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54786898	54786899	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33482221	33482221	+	Intron	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96090583	96090583	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96140288	96140288	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPB1	51733	broad.mit.edu	37	22	24916322	24916322	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UQCR11	10975	broad.mit.edu	37	19	1599507	1599507	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
URB2	9816	broad.mit.edu	37	1	229771856	229771856	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215807775	215807775	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215848726	215848726	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215960039	215960039	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216051288	216051288	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216251676	216251676	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216258133	216258133	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216371752	216371752	+	Nonsense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61441511	61441511	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP53	54532	broad.mit.edu	37	4	120189602	120189602	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5044683	5044683	+	Intron	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5051907	5051907	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8988720	8988720	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP8	9101	broad.mit.edu	37	15	50791203	50791203	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USPL1	10208	broad.mit.edu	37	13	31233061	31233061	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	115877250	115877250	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	121380612	121380612	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	126784	126784	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	130262768	130262768	+	IGR	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	37233317	37233317	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	43201924	43201924	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46174385	46174385	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	46187438	46187438	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	122485124	122485124	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	122831770	122831770	+	IGR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	14929686	14929686	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	23501777	23501777	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4537034	4537034	+	IGR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48442648	48442648	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48547902	48547902	+	IGR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48632098	48632098	+	IGR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48997048	48997048	+	IGR	SNP	G	T	T	rs149740596	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49855002	49855002	+	IGR	DEL	T	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50227634	50227634	+	IGR	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	5114726	5114726	+	IGR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55783073	55783073	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55933302	55933302	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56785958	56785958	+	IGR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56786198	56786198	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	57995185	57995185	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	58861932	58861932	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6015659	6015659	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	6016053	6016053	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	94783262	94783262	+	IGR	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	25589179	25589179	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33139746	33139746	+	IGR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33607397	33607397	+	IGR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	5141820	5141820	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	53125561	53125561	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19989527	19989527	+	IGR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	64385496	64385496	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	66362702	66362702	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19475853	19475853	+	IGR	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19806438	19806438	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19855563	19855563	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20137182	20137182	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	39684996	39684996	+	IGR	DEL	C	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	42025164	42025164	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	67912712	67912712	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82128906	82128906	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	82383465	82383465	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20457256	20457256	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22692333	22692333	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	16457608	16457608	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	31973516	31973516	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32169265	32169265	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32170412	32170412	+	IGR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32186833	32186833	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32374952	32374952	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32442975	32442975	+	IGR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32621275	32621275	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32883419	32883419	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32926695	32926695	+	IGR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32989760	32989760	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33380056	33380056	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605089	33605089	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605335	33605335	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33605496	33605496	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33752621	33752621	+	IGR	SNP	C	A	A	rs144359095	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33941795	33941795	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25994213	25994213	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	30418679	30418679	+	IGR	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14153139	14153139	+	IGR	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14378693	14378693	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	15254587	15254587	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	48957	48957	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57597350	57597350	+	IGR	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	84096	84096	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20047931	20047931	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22321810	22321810	+	IGR	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22486152	22486152	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	54216703	54216703	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	56717679	56717679	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	111550466	111550466	+	IGR	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	12986446	12986446	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	13219434	13219434	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	13414069	13414069	+	IGR	SNP	G	A	A	rs150316396	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149037789	149037789	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149096449	149096449	+	IGR	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149102926	149102926	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	153198422	153198422	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158494805	158494805	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158577180	158577180	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	168338591	168338591	+	IGR	SNP	G	C	C	rs139050280	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	171652937	171652937	+	IGR	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	172855326	172855326	+	IGR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	175013999	175013999	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	237144948	237144948	+	IGR	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247394422	247394422	+	IGR	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	247902274	247902274	+	IGR	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248604753	248604753	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248604802	248604802	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	10366636	10366636	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	21482071	21482071	+	IGR	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181005	11181005	+	IGR	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181415	11181415	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14760061	14760061	+	IGR	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14898768	14898768	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14899164	14899164	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	32433676	32433676	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	39466611	39466611	+	IGR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	105388508	105388508	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	107314103	107314103	+	IGR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	130988963	130988963	+	IGR	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132384251	132384251	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	149352731	149352731	+	IGR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162363750	162363750	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	168572227	168572227	+	IGR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	17465775	17465775	+	IGR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186412173	186412173	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	190177001	190177001	+	IGR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	196448392	196448392	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	207275672	207275672	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	208546628	208546628	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	232450678	232450679	+	IGR	INS	-	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	235238162	235238162	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	32048443	32048443	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34065528	34065528	+	IGR	DEL	C	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	38044336	38044336	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	42047256	42047256	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	62398005	62398005	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91801091	91801091	+	IGR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96148396	96148396	+	IGR	DEL	C	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	114998473	114998474	+	IGR	DNP	GG	TT	TT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	12829422	12829422	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	12829622	12829622	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	152847351	152847351	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180041038	180041038	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	35257422	35257422	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	68606556	68606556	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96285312	96285312	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	99944345	99944345	+	IGR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	137276888	137276888	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	182444104	182444104	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	25687882	25687882	+	IGR	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	27162627	27162627	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	64216686	64216686	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69574500	69574500	+	IGR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9704674	9704674	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	10664906	10664906	+	IGR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	145239233	145239233	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25910398	25910398	+	IGR	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	30365456	30365456	+	IGR	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	31053759	31053759	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	49929304	49929304	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	56817031	56817031	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	70988367	70988367	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	72706043	72706043	+	IGR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	85383806	85383806	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	97674893	97674893	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	101337630	101337630	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	127981117	127981117	+	IGR	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	138971951	138971951	+	IGR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	148969269	148969269	+	IGR	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	36642192	36642192	+	IGR	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	48117496	48117496	+	IGR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	10491130	10491130	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	122870425	122870425	+	IGR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	152446515	152446515	+	IGR	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	27501990	27501990	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53256276	53256276	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53256382	53256382	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56570345	56570345	+	IGR	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56665108	56665108	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56665323	56665323	+	IGR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57128920	57128920	+	IGR	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57217720	57217720	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62694683	62694683	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63020588	63020588	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	7218015	7218015	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	88141654	88141654	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	98857863	98857863	+	IGR	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	103935746	103935746	+	IGR	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	58156798	58156799	+	IGR	DNP	CA	AT	AT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	67896880	67896880	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109932794	109932794	+	IGR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	31254202	31254202	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	40293082	40293083	+	IGR	DNP	GG	TT	TT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68357396	68357396	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	71225667	71225667	+	IGR	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84673744	84673744	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	99918728	99918728	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	110678242	110678242	+	IGR	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	137570947	137570947	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147133798	147133798	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	150395283	150395283	+	IGR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	25213144	25213144	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	27537612	27537612	+	IGR	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	5224813	5224813	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	57704276	57704276	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	64993246	64993246	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79828271	79828271	+	IGR	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	85340331	85340331	+	IGR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92478569	92478569	+	IGR	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92543125	92543125	+	IGR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAC14	55697	broad.mit.edu	37	16	70796856	70796856	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAT1L	57687	broad.mit.edu	37	16	77896581	77896581	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108116941	108116941	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101188930	101188930	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R2	317701	broad.mit.edu	37	19	53762734	53762734	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R5	317705	broad.mit.edu	37	1	247419370	247419370	+	5'Flank	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13D	55187	broad.mit.edu	37	1	12566864	12566864	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS16	64601	broad.mit.edu	37	20	2841893	2841893	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS4B	9525	broad.mit.edu	37	18	61082738	61082738	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBP2	23558	broad.mit.edu	37	17	73851355	73851355	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDFY3	23001	broad.mit.edu	37	4	85771119	85771119	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR11	55717	broad.mit.edu	37	10	122624731	122624731	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR16	146845	broad.mit.edu	37	17	9501631	9501631	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR17	116966	broad.mit.edu	37	4	177058693	177058693	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR25	79446	broad.mit.edu	37	14	100950240	100950240	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR26	80232	broad.mit.edu	37	1	224586245	224586245	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR53	348793	broad.mit.edu	37	3	196288274	196288274	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR62	284403	broad.mit.edu	37	19	36562587	36562587	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR6	11180	broad.mit.edu	37	3	49049969	49049969	+	Silent	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR72	256764	broad.mit.edu	37	15	53908074	53908074	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR74	54663	broad.mit.edu	37	11	62603205	62603205	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR74	54663	broad.mit.edu	37	11	62606600	62606600	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR78	79819	broad.mit.edu	37	1	67303405	67303405	+	Silent	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR89	112840	broad.mit.edu	37	14	64066267	64066267	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPI1	55062	broad.mit.edu	37	17	66446810	66446810	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT10A	80326	broad.mit.edu	37	2	219754887	219754887	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT8B	7479	broad.mit.edu	37	10	102239783	102239783	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31605971	31605971	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP2	129446	broad.mit.edu	37	2	168100183	168100183	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73064159	73064159	+	RNA	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XKR6	286046	broad.mit.edu	37	8	10755642	10755642	+	Frame_Shift_Del	DEL	C	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128881743	128881743	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO1	7514	broad.mit.edu	37	2	61721218	61721218	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPR1	9213	broad.mit.edu	37	1	180832881	180832881	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRCC4	7518	broad.mit.edu	37	5	82554470	82554470	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17211722	17211722	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17232156	17232156	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17232324	17232324	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17294420	17294420	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YARS	8565	broad.mit.edu	37	1	33272110	33272110	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YEATS2	55689	broad.mit.edu	37	3	183474513	183474513	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YY1AP1	55249	broad.mit.edu	37	1	155631238	155631238	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAP70	7535	broad.mit.edu	37	2	98349495	98349495	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB3	79842	broad.mit.edu	37	11	62519813	62519813	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H11A	9877	broad.mit.edu	37	1	203816441	203816441	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H15	55854	broad.mit.edu	37	2	187366001	187366001	+	Silent	SNP	T	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3HAV1	56829	broad.mit.edu	37	7	138768512	138768512	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC11	23318	broad.mit.edu	37	1	52903849	52903849	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111698882	111698882	+	Missense_Mutation	SNP	A	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111698884	111698884	+	Nonsense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC6	79670	broad.mit.edu	37	9	88925683	88925683	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC7	84186	broad.mit.edu	37	9	37126589	37126589	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC8	55596	broad.mit.edu	37	12	122968121	122968121	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC9	84240	broad.mit.edu	37	5	80604800	80604800	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC11	79844	broad.mit.edu	37	5	814880	814881	+	Frame_Shift_Del	DEL	GT	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC4	55146	broad.mit.edu	37	7	6621324	6621324	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31809433	31809433	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31810851	31810851	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFC3H1	196441	broad.mit.edu	37	12	72057219	72057219	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77616325	77616325	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77764826	77764826	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77775789	77775789	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP112	7771	broad.mit.edu	37	19	44896373	44896373	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP112	7771	broad.mit.edu	37	19	44901291	44901291	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106431453	106431453	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC4	84107	broad.mit.edu	37	3	147120725	147120725	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF136	7695	broad.mit.edu	37	19	12298356	12298356	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF160	90338	broad.mit.edu	37	19	53572675	53572675	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF175	7728	broad.mit.edu	37	19	52076428	52076428	+	5'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF19	7567	broad.mit.edu	37	16	71512970	71512970	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF215	7762	broad.mit.edu	37	11	6962758	6962758	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF217	7764	broad.mit.edu	37	20	52193386	52193386	+	Silent	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF226	7769	broad.mit.edu	37	19	44680896	44680897	+	Frame_Shift_Del	DEL	AG	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF235	9310	broad.mit.edu	37	19	44791690	44791690	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF239	8187	broad.mit.edu	37	10	44053404	44053404	+	Missense_Mutation	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF260	339324	broad.mit.edu	37	19	37006026	37006026	+	Nonsense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF284	342909	broad.mit.edu	37	19	44585189	44585189	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF284	342909	broad.mit.edu	37	19	44590804	44590804	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF28	7576	broad.mit.edu	37	19	53303365	53303365	+	Missense_Mutation	SNP	G	A	A	rs139244544		TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF28	7576	broad.mit.edu	37	19	53311326	53311326	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF292	23036	broad.mit.edu	37	6	87966507	87966507	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF304	57343	broad.mit.edu	37	19	57862888	57862888	+	5'UTR	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354B	117608	broad.mit.edu	37	5	178293996	178293996	+	Silent	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF415	55786	broad.mit.edu	37	19	53611692	53611692	+	Missense_Mutation	SNP	G	A	A	rs138184993	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF420	147923	broad.mit.edu	37	19	37618899	37618907	+	In_Frame_Del	DEL	GAATGTAAG	-	-			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF498	221785	broad.mit.edu	37	7	99219026	99219026	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22806338	22806338	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF525	170958	broad.mit.edu	37	19	53885745	53885745	+	3'UTR	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF525	170958	broad.mit.edu	37	19	53889506	53889506	+	3'UTR	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30934628	30934628	+	Silent	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	30936268	30936268	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31040277	31040277	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF548	147694	broad.mit.edu	37	19	57908264	57908264	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF549	256051	broad.mit.edu	37	19	58046692	58046692	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF556	80032	broad.mit.edu	37	19	2873608	2873608	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF560	147741	broad.mit.edu	37	19	9585954	9585954	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF571	51276	broad.mit.edu	37	19	38056663	38056663	+	Missense_Mutation	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF582	147948	broad.mit.edu	37	19	56901655	56901655	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF587	84914	broad.mit.edu	37	19	58367546	58367546	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF587	84914	broad.mit.edu	37	19	58369964	58369964	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF597	146434	broad.mit.edu	37	16	3486959	3486959	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF607	84775	broad.mit.edu	37	19	38190116	38190116	+	Nonsense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF621	285268	broad.mit.edu	37	3	40570894	40570894	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF622	90441	broad.mit.edu	37	5	16458777	16458777	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF626	199777	broad.mit.edu	37	19	20829315	20829315	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF644	84146	broad.mit.edu	37	1	91405710	91405710	+	Missense_Mutation	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF653	115950	broad.mit.edu	37	19	11608978	11608978	+	Intron	SNP	C	A	A	rs150397476	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF664	144348	broad.mit.edu	37	12	124496642	124496642	+	5'UTR	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF665	79788	broad.mit.edu	37	19	53668214	53668214	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22364202	22364202	+	Missense_Mutation	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF677	342926	broad.mit.edu	37	19	53740551	53740551	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF705A	440077	broad.mit.edu	37	12	8325043	8325043	+	5'Flank	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57522834	57522834	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF71	58491	broad.mit.edu	37	19	57132765	57132765	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF71	58491	broad.mit.edu	37	19	57133628	57133628	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF746	155061	broad.mit.edu	37	7	149174083	149174083	+	Silent	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF765	91661	broad.mit.edu	37	19	53911608	53911608	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF781	163115	broad.mit.edu	37	19	38160023	38160023	+	3'UTR	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185801785	185801785	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF816A	125893	broad.mit.edu	37	19	53455907	53455907	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF826	664701	broad.mit.edu	37	19	20500458	20500459	+	Intron	INS	-	TT	TT			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF827	152485	broad.mit.edu	37	4	146813424	146813424	+	Missense_Mutation	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF829	374899	broad.mit.edu	37	19	37399297	37399297	+	Missense_Mutation	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57767923	57767923	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF83	55769	broad.mit.edu	37	19	53156108	53156108	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF83	55769	broad.mit.edu	37	19	53157381	53157381	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNFX1	57169	broad.mit.edu	37	20	47888037	47888037	+	Silent	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP2	7783	broad.mit.edu	37	16	21209282	21209282	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238049056	238049056	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPLD1	131368	broad.mit.edu	37	3	102188064	102188064	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB2	9406	broad.mit.edu	37	1	71534972	71534972	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB3	84083	broad.mit.edu	37	2	135965138	135965138	+	Missense_Mutation	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB3	84083	broad.mit.edu	37	2	135975243	135975243	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58563849	58563849	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN2	54993	broad.mit.edu	37	15	85165222	85165222	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN4	201516	broad.mit.edu	37	19	58187554	58187554	+	Missense_Mutation	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5B	342933	broad.mit.edu	37	19	56701607	56701607	+	Silent	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	59997483	59997483	+	RNA	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	95410279	95410279	+	5'Flank	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22356303	22356303	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22509139	22509139	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20193240	20193240	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20490724	20490724	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31093432	31093432	+	5'Flank	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34739704	34739704	+	RNA	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	35037449	35037449	+	5'Flank	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	34234038	34234038	+	RNA	SNP	T	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	58512569	58512569	+	RNA	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	58512642	58512642	+	RNA	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	15884834	15884834	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22781997	22781997	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143212991	143212991	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	151991244	151991244	+	RNA	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186672931	186672931	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	190788486	190788486	+	Missense_Mutation	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89309560	89309560	+	RNA	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89399788	89399788	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90139144	90139144	+	RNA	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91679102	91679102	+	RNA	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96581853	96581853	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96583814	96583814	+	Intron	SNP	A	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	156528129	156528129	+	Intron	SNP	T	A	A	rs62278061	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	187250620	187250620	+	Intron	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85165898	85165898	+	Intron	SNP	C	G	G			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100549774	100549774	+	5'Flank	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100552975	100552975	+	RNA	SNP	G	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142001015	142001015	+	Missense_Mutation	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142045956	142045956	+	Intron	SNP	T	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142099724	142099724	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142104480	142104480	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142157635	142157635	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142162369	142162369	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142176242	142176242	+	Intron	SNP	A	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142176244	142176244	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142176364	142176364	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142206495	142206495	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142334539	142334539	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142428720	142428720	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142468327	142468327	+	Intron	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142498757	142498757	+	RNA	SNP	G	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	99585262	99585262	+	Intron	SNP	C	A	A			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73142757	73142757	+	Intron	SNP	G	C	C			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	22823399	22823399	+	RNA	SNP	C	T	T	rs111465524	by1000genomes	TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43839960	43839960	+	Intron	SNP	C	T	T			TCGA-05-4424-01A-22D-1855-08	TCGA-05-4424-10A-01D-1855-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
