Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A1BG	1	broad.mit.edu	37	19	58858351	58858351	+	3'UTR	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A1BG	1	broad.mit.edu	37	19	58858351	58858351	+	3'UTR	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAK1	22848	broad.mit.edu	37	2	69734606	69734606	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAK1	22848	broad.mit.edu	37	2	69734606	69734606	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67078904	67078904	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67078904	67078904	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87179864	87179864	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87179864	87179864	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC1	4363	broad.mit.edu	37	16	16215882	16215882	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM3	22885	broad.mit.edu	37	5	148617109	148617109	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM3	22885	broad.mit.edu	37	5	148617109	148617109	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35691747	35691747	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35691747	35691747	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20481156	20481156	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR2B	93	broad.mit.edu	37	3	38524628	38524628	+	Splice_Site	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR2B	93	broad.mit.edu	37	3	38524628	38524628	+	Splice_Site	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127708376	127708376	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127708376	127708376	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106320571	106320571	+	RNA	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106967217	106967217	+	RNA	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106320571	106320571	+	RNA	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106967217	106967217	+	RNA	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS4	9507	broad.mit.edu	37	1	161163558	161163558	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS4	9507	broad.mit.edu	37	1	161163558	161163558	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1C	126	broad.mit.edu	37	4	100267994	100267994	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1C	126	broad.mit.edu	37	4	100267994	100267994	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147743758	147743758	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147743758	147743758	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIDA	64853	broad.mit.edu	37	1	222843271	222843271	+	Silent	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIDA	64853	broad.mit.edu	37	1	222843271	222843271	+	Silent	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1L	55057	broad.mit.edu	37	1	26648835	26648835	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1L	55057	broad.mit.edu	37	1	26648835	26648835	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP4	8852	broad.mit.edu	37	X	49958059	49958059	+	Silent	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP4	8852	broad.mit.edu	37	X	49958061	49958061	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP4	8852	broad.mit.edu	37	X	49958059	49958059	+	Silent	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP4	8852	broad.mit.edu	37	X	49958061	49958061	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNAD1	254268	broad.mit.edu	37	1	109358790	109358790	+	3'UTR	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNAD1	254268	broad.mit.edu	37	1	109358790	109358790	+	3'UTR	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG1L	200810	broad.mit.edu	37	3	125651382	125651382	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG1L	200810	broad.mit.edu	37	3	125651382	125651382	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH4	54784	broad.mit.edu	37	7	102100065	102100065	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALKBH4	54784	broad.mit.edu	37	7	102100065	102100065	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMMECR1	9949	broad.mit.edu	37	X	109459811	109459811	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMMECR1	9949	broad.mit.edu	37	X	109459811	109459811	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112048142	112048143	+	Intron	DNP	CC	AA	AA			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOT	154796	broad.mit.edu	37	X	112048142	112048143	+	Intron	DNP	CC	AA	AA			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT1	284	broad.mit.edu	37	8	108348464	108348464	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT1	284	broad.mit.edu	37	8	108348464	108348464	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT4	51378	broad.mit.edu	37	20	854795	854795	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGPT4	51378	broad.mit.edu	37	20	854795	854795	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30B	374860	broad.mit.edu	37	18	14779834	14779834	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO10	55129	broad.mit.edu	37	3	43474152	43474152	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO10	55129	broad.mit.edu	37	3	43474152	43474152	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB2	323	broad.mit.edu	37	4	40895200	40895200	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB2	323	broad.mit.edu	37	4	40895200	40895200	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115329519	115329519	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQPEP	206338	broad.mit.edu	37	5	115329519	115329519	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARF1	375	broad.mit.edu	37	1	228285492	228285493	+	Intron	INS	-	G	G	rs147721417	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10L	55160	broad.mit.edu	37	1	17942588	17942588	+	Splice_Site	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10L	55160	broad.mit.edu	37	1	17942588	17942588	+	Splice_Site	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID2	196528	broad.mit.edu	37	12	46245579	46245579	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID2	196528	broad.mit.edu	37	12	46245579	46245579	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRB1	408	broad.mit.edu	37	11	74977166	74977166	+	3'UTR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRB1	408	broad.mit.edu	37	11	74977166	74977166	+	3'UTR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRB2	409	broad.mit.edu	37	17	4621908	4621908	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRB2	409	broad.mit.edu	37	17	4621908	4621908	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL2	55252	broad.mit.edu	37	2	25967042	25967042	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATE1	11101	broad.mit.edu	37	10	123658331	123658331	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATE1	11101	broad.mit.edu	37	10	123658331	123658331	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B4	79895	broad.mit.edu	37	15	50223226	50223226	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8B4	79895	broad.mit.edu	37	15	50223226	50223226	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALT4	8705	broad.mit.edu	37	6	33246358	33246358	+	3'UTR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GALT4	8705	broad.mit.edu	37	6	33246358	33246358	+	3'UTR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAG3	9531	broad.mit.edu	37	10	121432086	121432086	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAG3	9531	broad.mit.edu	37	10	121432086	121432086	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCHE	590	broad.mit.edu	37	3	165547424	165547424	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCHE	590	broad.mit.edu	37	3	165547424	165547424	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDP1	55814	broad.mit.edu	37	5	70763332	70763332	+	Intron	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDP1	55814	broad.mit.edu	37	5	70763332	70763332	+	Intron	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL1	80341	broad.mit.edu	37	20	31607499	31607499	+	Silent	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL1	80341	broad.mit.edu	37	20	31607499	31607499	+	Silent	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD8	284697	broad.mit.edu	37	1	92592063	92592064	+	Intron	INS	-	GT	GT	rs148177634	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100617167	100617167	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100617167	100617167	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf122	387718	broad.mit.edu	37	10	127355709	127355709	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf122	387718	broad.mit.edu	37	10	127355709	127355709	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf4	57102	broad.mit.edu	37	12	4627461	4627461	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf4	57102	broad.mit.edu	37	12	4627461	4627461	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf23	80209	broad.mit.edu	37	13	39597116	39597116	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf23	80209	broad.mit.edu	37	13	39597116	39597116	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf135	64430	broad.mit.edu	37	14	60574777	60574777	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf135	64430	broad.mit.edu	37	14	60574777	60574777	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf114	57821	broad.mit.edu	37	1	169388313	169388313	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf114	57821	broad.mit.edu	37	1	169388313	169388313	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf189	388701	broad.mit.edu	37	1	154172905	154172905	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf30	152405	broad.mit.edu	37	3	118870019	118870019	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf30	152405	broad.mit.edu	37	3	118870019	118870019	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf40	401137	broad.mit.edu	37	4	71020089	71020089	+	5'UTR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf40	401137	broad.mit.edu	37	4	71020089	71020089	+	5'UTR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf204	387119	broad.mit.edu	37	6	118953676	118953676	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf204	387119	broad.mit.edu	37	6	118953676	118953676	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40931182	40931182	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40931182	40931182	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf46	340277	broad.mit.edu	37	7	23729109	23729109	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf46	340277	broad.mit.edu	37	7	23729109	23729109	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2742744	2742744	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2742744	2742744	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1I	8911	broad.mit.edu	37	22	40030822	40030822	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1I	8911	broad.mit.edu	37	22	40037181	40037181	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1I	8911	broad.mit.edu	37	22	40030822	40030822	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1I	8911	broad.mit.edu	37	22	40037181	40037181	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81626548	81626548	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81626548	81626548	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1984472	1984472	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1984472	1984472	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASC3	22794	broad.mit.edu	37	17	38296830	38296830	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASC3	22794	broad.mit.edu	37	17	38296830	38296830	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP1	834	broad.mit.edu	37	11	104916168	104916168	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP1	834	broad.mit.edu	37	11	104916168	104916168	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP5	838	broad.mit.edu	37	11	104872881	104872881	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASP5	838	broad.mit.edu	37	11	104872881	104872881	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ2	845	broad.mit.edu	37	1	116311165	116311165	+	5'UTR	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ2	845	broad.mit.edu	37	1	116311165	116311165	+	5'UTR	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPERG	57828	broad.mit.edu	37	19	38853047	38853047	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBL	867	broad.mit.edu	37	11	119103454	119103454	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC125	202243	broad.mit.edu	37	5	68630152	68630152	+	5'Flank	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC125	202243	broad.mit.edu	37	5	68630152	68630152	+	5'Flank	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC8	83987	broad.mit.edu	37	19	46915990	46915990	+	Silent	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC8	83987	broad.mit.edu	37	19	46915990	46915990	+	Silent	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKBR	887	broad.mit.edu	37	11	6290956	6290956	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKBR	887	broad.mit.edu	37	11	6290956	6290956	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNG1	900	broad.mit.edu	37	5	162866386	162866386	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNG1	900	broad.mit.edu	37	5	162866386	162866386	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74519647	74519647	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74519647	74519647	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD33	945	broad.mit.edu	37	19	51728706	51728706	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD33	945	broad.mit.edu	37	19	51728706	51728706	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD82	3732	broad.mit.edu	37	11	44626629	44626629	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD82	3732	broad.mit.edu	37	11	44626629	44626629	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDAN1	146059	broad.mit.edu	37	15	43020761	43020761	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDAN1	146059	broad.mit.edu	37	15	43020761	43020761	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24487847	24487847	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24487847	24487847	+	Nonsense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR1	92211	broad.mit.edu	37	10	85957426	85957426	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR1	92211	broad.mit.edu	37	10	85957426	85957426	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL5	6792	broad.mit.edu	37	X	18643179	18643179	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL5	6792	broad.mit.edu	37	X	18643179	18643179	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF1	10658	broad.mit.edu	37	11	47510459	47510459	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELF1	10658	broad.mit.edu	37	11	47510459	47510459	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFC1B	653275	broad.mit.edu	37	2	131356185	131356185	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFC1B	653275	broad.mit.edu	37	2	131356185	131356185	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40053841	40053841	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40053841	40053841	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136623025	136623025	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRM2	1129	broad.mit.edu	37	7	136623025	136623025	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB4	1143	broad.mit.edu	37	15	78927972	78927972	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB4	1143	broad.mit.edu	37	15	78927972	78927972	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA2	9635	broad.mit.edu	37	1	86890064	86890064	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA2	9635	broad.mit.edu	37	1	86890064	86890064	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCNKB	1188	broad.mit.edu	37	1	16362884	16362884	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCNKB	1188	broad.mit.edu	37	1	16362884	16362884	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMTM1	113540	broad.mit.edu	37	16	66611142	66611142	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CMTM1	113540	broad.mit.edu	37	16	66611142	66611142	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNBD1	168975	broad.mit.edu	37	8	88218202	88218203	+	Intron	INS	-	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6260417	6260417	+	5'UTR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA4	1262	broad.mit.edu	37	11	6260417	6260417	+	5'UTR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT2	4848	broad.mit.edu	37	12	70747665	70747665	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT2	4848	broad.mit.edu	37	12	70747665	70747665	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	99786762	99786762	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	99786762	99786762	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109841756	109841756	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109841756	109841756	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107400454	107400454	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A6	1288	broad.mit.edu	37	X	107400454	107400454	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A3	1299	broad.mit.edu	37	20	61459170	61459170	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A3	1299	broad.mit.edu	37	20	61459170	61459170	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC11	78989	broad.mit.edu	37	2	3673510	3673510	+	Intron	SNP	G	T	T	rs111455909	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC11	78989	broad.mit.edu	37	2	3673510	3673510	+	Intron	SNP	G	T	T	rs111455909	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF3	51692	broad.mit.edu	37	2	9570743	9570743	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPSF3	51692	broad.mit.edu	37	2	9570743	9570743	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CP	1356	broad.mit.edu	37	3	148894324	148894324	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBA4	1413	broad.mit.edu	37	22	27024278	27024278	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBA4	1413	broad.mit.edu	37	22	27024278	27024278	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34128604	34128604	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34128604	34128604	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113871361	113871361	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113871361	113871361	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNAL1	8727	broad.mit.edu	37	9	111745468	111745468	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNAL1	8727	broad.mit.edu	37	9	111745468	111745468	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL7	9820	broad.mit.edu	37	6	43007936	43007936	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL7	9820	broad.mit.edu	37	6	43007936	43007936	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111776002	111776002	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111776002	111776002	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXXC1	30827	broad.mit.edu	37	18	47810363	47810363	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXXC1	30827	broad.mit.edu	37	18	47810363	47810363	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYC1	1537	broad.mit.edu	37	8	145151666	145151692	+	Intron	DEL	GGCAGTGGGCATGTGGAATACTTCTCC	-	-	rs75325545		TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15769378	15769378	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15769378	15769378	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
D2HGDH	728294	broad.mit.edu	37	2	242681862	242681862	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
D2HGDH	728294	broad.mit.edu	37	2	242681862	242681862	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DARS2	55157	broad.mit.edu	37	1	173822600	173822600	+	Silent	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DARS2	55157	broad.mit.edu	37	1	173822600	173822600	+	Silent	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF11	80344	broad.mit.edu	37	14	24586142	24586142	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF11	80344	broad.mit.edu	37	14	24586142	24586142	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDHD2	23259	broad.mit.edu	37	8	38109393	38109394	+	Intron	DNP	GC	AT	AT			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDHD2	23259	broad.mit.edu	37	8	38109393	38109394	+	Intron	DNP	GC	AT	AT			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX27	55661	broad.mit.edu	37	20	47860161	47860161	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX27	55661	broad.mit.edu	37	20	47860161	47860161	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX50	79009	broad.mit.edu	37	10	70694527	70694527	+	Intron	DEL	A	-	-			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX50	79009	broad.mit.edu	37	10	70694527	70694527	+	Intron	DEL	A	-	-			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31630896	31630896	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5B	160518	broad.mit.edu	37	12	31630896	31630896	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX16	8449	broad.mit.edu	37	6	30630530	30630530	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX34	9704	broad.mit.edu	37	19	47870329	47870329	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX34	9704	broad.mit.edu	37	19	47870329	47870329	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21730311	21730311	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21757385	21757385	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21856357	21856357	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21730311	21730311	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21757385	21757385	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21856357	21856357	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21061251	21061251	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21061251	21061251	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11547823	11547823	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169111325	169111325	+	Silent	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK2	1794	broad.mit.edu	37	5	169111325	169111325	+	Silent	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOPEY1	23033	broad.mit.edu	37	6	83818499	83818499	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF1	8193	broad.mit.edu	37	19	38709528	38709528	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF1	8193	broad.mit.edu	37	19	38709528	38709528	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105405013	105405013	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105440465	105440465	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105405013	105405013	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYS	1807	broad.mit.edu	37	8	105440465	105440465	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113878572	113878572	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRD3	1814	broad.mit.edu	37	3	113878572	113878572	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56382331	56382331	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56468068	56468068	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56382331	56382331	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56468068	56468068	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71797971	71797971	+	Intron	SNP	A	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71797971	71797971	+	Intron	SNP	A	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1L	199221	broad.mit.edu	37	3	137799537	137799537	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DZIP1L	199221	broad.mit.edu	37	3	137799537	137799537	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF3	253738	broad.mit.edu	37	10	131665611	131665611	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF3	253738	broad.mit.edu	37	10	131665611	131665611	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C3	192669	broad.mit.edu	37	1	36505618	36505618	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C3	192669	broad.mit.edu	37	1	36505618	36505618	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G3	8672	broad.mit.edu	37	1	21268737	21268737	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4G3	8672	broad.mit.edu	37	1	21268737	21268737	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELFN2	114794	broad.mit.edu	37	22	37771375	37771375	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELFN2	114794	broad.mit.edu	37	22	37771375	37771375	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6928183	6928183	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMR1	2015	broad.mit.edu	37	19	6928183	6928183	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENSA	2029	broad.mit.edu	37	1	150599975	150599975	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENSA	2029	broad.mit.edu	37	1	150599975	150599975	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212530205	212530205	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212530205	212530205	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV6	2120	broad.mit.edu	37	12	12038881	12038881	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ETV6	2120	broad.mit.edu	37	12	12038881	12038881	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXPH5	23086	broad.mit.edu	37	11	108381132	108381132	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXPH5	23086	broad.mit.edu	37	11	108381132	108381132	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAAH	2166	broad.mit.edu	37	1	46871349	46871349	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAAH	2166	broad.mit.edu	37	1	46871349	46871349	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107B	83641	broad.mit.edu	37	10	14765301	14765301	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM107B	83641	broad.mit.edu	37	10	14765301	14765301	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63411089	63411089	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63412785	63412785	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63411089	63411089	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123B	139285	broad.mit.edu	37	X	63412785	63412785	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139153491	139153491	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177250215	177250215	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5B	57795	broad.mit.edu	37	1	177250215	177250215	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12237661	12237661	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12237661	12237661	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83G	644815	broad.mit.edu	37	17	18881012	18881012	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83G	644815	broad.mit.edu	37	17	18881012	18881012	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM9B	171483	broad.mit.edu	37	X	9001120	9001120	+	5'Flank	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM9B	171483	broad.mit.edu	37	X	9001120	9001120	+	5'Flank	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48760510	48760510	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48760510	48760510	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127614468	127614468	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL13	222235	broad.mit.edu	37	7	102553679	102553679	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL13	222235	broad.mit.edu	37	7	102553679	102553679	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3B	2215	broad.mit.edu	37	1	161595804	161595804	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGR3B	2215	broad.mit.edu	37	1	161595804	161595804	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN1	2219	broad.mit.edu	37	9	137801922	137801922	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN1	2219	broad.mit.edu	37	9	137801922	137801922	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEZF1	389549	broad.mit.edu	37	7	121942174	121942174	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FEZF1	389549	broad.mit.edu	37	7	121942174	121942174	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF18	8817	broad.mit.edu	37	5	170847398	170847398	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF18	8817	broad.mit.edu	37	5	170847398	170847398	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR4	2264	broad.mit.edu	37	5	176524501	176524501	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGFR4	2264	broad.mit.edu	37	5	176524501	176524501	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLI1	2313	broad.mit.edu	37	11	128680783	128680783	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLI1	2313	broad.mit.edu	37	11	128680783	128680783	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89424161	89424161	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89424161	89424161	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXM1	2305	broad.mit.edu	37	12	2968862	2968862	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXM1	2305	broad.mit.edu	37	12	2968862	2968862	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD1	22844	broad.mit.edu	37	9	37730993	37730993	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD1	22844	broad.mit.edu	37	9	37730993	37730993	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJD1	55783	broad.mit.edu	37	16	71318373	71318373	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJD1	55783	broad.mit.edu	37	16	71318373	71318373	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUZ	80199	broad.mit.edu	37	19	50314903	50314903	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUZ	80199	broad.mit.edu	37	19	50314903	50314903	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47033584	47033584	+	5'UTR	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47033584	47033584	+	5'UTR	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31147698	31147698	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31147698	31147698	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCM2	9247	broad.mit.edu	37	6	10874367	10874367	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCM2	9247	broad.mit.edu	37	6	10874367	10874367	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEFT	115557	broad.mit.edu	37	12	58007948	58007948	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GEFT	115557	broad.mit.edu	37	12	58007948	58007948	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGNBP2	79893	broad.mit.edu	37	17	34937810	34937810	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGNBP2	79893	broad.mit.edu	37	17	34937810	34937810	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA10	84694	broad.mit.edu	37	6	90605301	90605301	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA10	84694	broad.mit.edu	37	6	90605301	90605301	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPLD1	2822	broad.mit.edu	37	6	24462987	24462987	+	Silent	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPLD1	2822	broad.mit.edu	37	6	24462987	24462987	+	Silent	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135498732	135498732	+	3'UTR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135498732	135498732	+	3'UTR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	89943510	89943510	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC6A	222545	broad.mit.edu	37	6	117130667	117130667	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC6A	222545	broad.mit.edu	37	6	117130667	117130667	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122318381	122318381	+	Translation_Start_Site	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122318381	122318381	+	Translation_Start_Site	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2B	2959	broad.mit.edu	37	1	89319065	89319065	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF2B	2959	broad.mit.edu	37	1	89319065	89319065	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP2	54676	broad.mit.edu	37	6	43593055	43593055	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP2	54676	broad.mit.edu	37	6	43593055	43593055	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2C	2984	broad.mit.edu	37	12	14822645	14822646	+	Intron	DNP	GG	TT	TT			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2C	2984	broad.mit.edu	37	12	14822645	14822646	+	Intron	DNP	GG	TT	TT			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS3	79441	broad.mit.edu	37	4	2233854	2233854	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS3	79441	broad.mit.edu	37	4	2233854	2233854	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS4	54930	broad.mit.edu	37	14	23424312	23424312	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAUS4	54930	broad.mit.edu	37	14	23424312	23424312	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC6	10013	broad.mit.edu	37	X	48678431	48678431	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC6	10013	broad.mit.edu	37	X	48678431	48678431	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-B	3106	broad.mit.edu	37	6	31323207	31323207	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-B	3106	broad.mit.edu	37	6	31323207	31323207	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DOA	3111	broad.mit.edu	37	6	32975726	32975726	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DOA	3111	broad.mit.edu	37	6	32975726	32975726	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMBS	3145	broad.mit.edu	37	11	118960719	118960719	+	Missense_Mutation	SNP	G	A	A	rs143984293		TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMBS	3145	broad.mit.edu	37	11	118960719	118960719	+	Missense_Mutation	SNP	G	A	A	rs143984293		TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HP	3240	broad.mit.edu	37	16	72088612	72088612	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HP	3240	broad.mit.edu	37	16	72088612	72088612	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152185495	152185495	+	3'UTR	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRNR	388697	broad.mit.edu	37	1	152185495	152185495	+	3'UTR	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST5	222537	broad.mit.edu	37	6	114378488	114378488	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD11B1L	374875	broad.mit.edu	37	19	5687275	5687275	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD11B1L	374875	broad.mit.edu	37	19	5687275	5687275	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA2	3306	broad.mit.edu	37	14	65002478	65002478	+	5'Flank	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA2	3306	broad.mit.edu	37	14	65002478	65002478	+	5'Flank	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53652847	53652852	+	Intron	DEL	GCCGGT	-	-	rs11091285	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	94973045	94973045	+	3'UTR	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS	3376	broad.mit.edu	37	9	94973045	94973045	+	3'UTR	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT140	9742	broad.mit.edu	37	16	1639816	1639816	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT140	9742	broad.mit.edu	37	16	1639816	1639816	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160485336	160485336	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130408770	130408770	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130408770	130408770	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL27RA	9466	broad.mit.edu	37	19	14153285	14153285	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL27RA	9466	broad.mit.edu	37	19	14153285	14153285	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILDR2	387597	broad.mit.edu	37	1	166944553	166944553	+	5'UTR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILDR2	387597	broad.mit.edu	37	1	166944553	166944553	+	5'UTR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ING5	84289	broad.mit.edu	37	2	242648852	242648852	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ING5	84289	broad.mit.edu	37	2	242648852	242648852	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5D	3635	broad.mit.edu	37	2	234072375	234072375	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5D	3635	broad.mit.edu	37	2	234072375	234072375	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156811139	156811139	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSRR	3645	broad.mit.edu	37	1	156811139	156811139	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107978239	107978239	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRS4	8471	broad.mit.edu	37	X	107978239	107978239	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA11	22801	broad.mit.edu	37	15	68695252	68695252	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA11	22801	broad.mit.edu	37	15	68695252	68695252	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA1	3672	broad.mit.edu	37	5	52206136	52206136	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA1	3672	broad.mit.edu	37	5	52206136	52206136	+	Missense_Mutation	SNP	A	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2	3673	broad.mit.edu	37	5	52371076	52371076	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2	3673	broad.mit.edu	37	5	52371076	52371076	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124174058	124174058	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124174058	124174058	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA1	3736	broad.mit.edu	37	12	5021622	5021622	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA1	3736	broad.mit.edu	37	12	5021622	5021622	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ3	3760	broad.mit.edu	37	2	155566153	155566153	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ3	3760	broad.mit.edu	37	2	155566153	155566153	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196397126	196397126	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT2	343450	broad.mit.edu	37	1	196397126	196397126	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4A	9682	broad.mit.edu	37	1	44133717	44133717	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4A	9682	broad.mit.edu	37	1	44133717	44133717	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0100	9703	broad.mit.edu	37	17	26960091	26960091	+	Missense_Mutation	SNP	T	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0100	9703	broad.mit.edu	37	17	26960091	26960091	+	Missense_Mutation	SNP	T	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0240	23506	broad.mit.edu	37	6	42796705	42796705	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0240	23506	broad.mit.edu	37	6	42796705	42796705	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0391	9692	broad.mit.edu	37	14	35739605	35739605	+	Splice_Site	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0391	9692	broad.mit.edu	37	14	35739605	35739605	+	Splice_Site	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1012	22878	broad.mit.edu	37	18	29410976	29410976	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118284472	118284472	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43496396	43496396	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1632	57724	broad.mit.edu	37	18	43496396	43496396	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36869715	36869715	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36869715	36869715	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4B	285643	broad.mit.edu	37	5	154397003	154397003	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF4B	285643	broad.mit.edu	37	5	154397003	154397003	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57958835	57958835	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57958835	57958835	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86888699	86888699	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL4	56062	broad.mit.edu	37	X	86888699	86888699	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-3	337960	broad.mit.edu	37	21	31797938	31797938	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-3	337960	broad.mit.edu	37	21	31797938	31797938	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAGE3	8270	broad.mit.edu	37	X	153706525	153706525	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAGE3	8270	broad.mit.edu	37	X	153706525	153706525	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112471753	112471753	+	Silent	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112471753	112471753	+	Silent	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136552261	136552261	+	Silent	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCT	3938	broad.mit.edu	37	2	136552261	136552261	+	Silent	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55086420	55086420	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55086420	55086420	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22434370	22434370	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118124392	118124392	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118124392	118124392	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAR4	2846	broad.mit.edu	37	X	78010375	78010375	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPAR4	2846	broad.mit.edu	37	X	78010375	78010375	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG3	121227	broad.mit.edu	37	12	59274344	59274344	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIG3	121227	broad.mit.edu	37	12	59274344	59274344	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141260574	141260575	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141260574	141260575	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85450232	85450232	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85450232	85450232	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LST1	7940	broad.mit.edu	37	6	31555782	31555782	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LST1	7940	broad.mit.edu	37	6	31555782	31555782	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB1	4112	broad.mit.edu	37	X	30269436	30269436	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB1	4112	broad.mit.edu	37	X	30269436	30269436	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2B2	23324	broad.mit.edu	37	4	6616095	6616095	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2B2	23324	broad.mit.edu	37	4	6616095	6616095	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1A	4130	broad.mit.edu	37	15	43817874	43817874	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161508851	161508851	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K4	4216	broad.mit.edu	37	6	161508851	161508851	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP7	9053	broad.mit.edu	37	6	136710623	136710623	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP9	79884	broad.mit.edu	37	4	156281387	156281387	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP9	79884	broad.mit.edu	37	4	156281387	156281387	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK15	225689	broad.mit.edu	37	8	144800454	144800454	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK15	225689	broad.mit.edu	37	8	144800454	144800454	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8IP3	23162	broad.mit.edu	37	16	1779329	1779329	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8IP3	23162	broad.mit.edu	37	16	1779329	1779329	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBTPS2	51360	broad.mit.edu	37	X	21887672	21887672	+	Silent	SNP	A	G	G	rs144578691	byFrequency	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBTPS2	51360	broad.mit.edu	37	X	21887672	21887672	+	Silent	SNP	A	G	G	rs144578691	byFrequency	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70340930	70340930	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED12	9968	broad.mit.edu	37	X	70340930	70340930	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL4	64863	broad.mit.edu	37	18	2566837	2566837	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL4	64863	broad.mit.edu	37	18	2566837	2566837	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1277	100302214	broad.mit.edu	37	X	117520384	117520384	+	RNA	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR1277	100302214	broad.mit.edu	37	X	117520384	117520384	+	RNA	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED2	744	broad.mit.edu	37	11	30432971	30432971	+	3'UTR	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED2	744	broad.mit.edu	37	11	30432971	30432971	+	3'UTR	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPRIP	23164	broad.mit.edu	37	17	17053516	17053516	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPV17	4358	broad.mit.edu	37	2	27545298	27545298	+	Intron	DEL	C	-	-			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPV17	4358	broad.mit.edu	37	2	27545298	27545298	+	Intron	DEL	C	-	-			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRE11A	4361	broad.mit.edu	37	11	94209498	94209498	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRE11A	4361	broad.mit.edu	37	11	94209498	94209498	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSR1	4481	broad.mit.edu	37	8	16032786	16032786	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTAP	4507	broad.mit.edu	37	9	21837988	21837988	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTAP	4507	broad.mit.edu	37	9	21837988	21837988	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR9	66036	broad.mit.edu	37	8	11177386	11177386	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR9	66036	broad.mit.edu	37	8	11177386	11177386	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11184600	11184600	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11291433	11291433	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11184600	11184600	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11291433	11291433	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8971676	8971676	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9076466	9076466	+	Silent	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8971676	8971676	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9076466	9076466	+	Silent	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10209847	10209847	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10209847	10209847	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10429911	10429911	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10432095	10432095	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10429911	10429911	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10432095	10432095	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH9	4627	broad.mit.edu	37	22	36678573	36678573	+	3'UTR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH9	4627	broad.mit.edu	37	22	36678573	36678573	+	3'UTR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPOP	339344	broad.mit.edu	37	19	46393833	46393833	+	3'UTR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPOP	339344	broad.mit.edu	37	19	46393833	46393833	+	3'UTR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGA	4668	broad.mit.edu	37	22	42461775	42461775	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGA	4668	broad.mit.edu	37	22	42461775	42461775	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101742412	101742413	+	Intron	DEL	TG	-	-			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124820233	124820233	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124820233	124820233	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4L	23327	broad.mit.edu	37	18	55996303	55996303	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK1	4750	broad.mit.edu	37	4	170321765	170321765	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK1	4750	broad.mit.edu	37	4	170321765	170321765	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	22145404	22145404	+	RNA	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	22145404	22145404	+	RNA	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFASC	23114	broad.mit.edu	37	1	204921287	204921287	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52520602	52520602	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID2	22795	broad.mit.edu	37	14	52520602	52520602	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKD1	85407	broad.mit.edu	37	16	50642215	50642215	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKD1	85407	broad.mit.edu	37	16	50642215	50642215	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55481503	55481503	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55481503	55481503	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56382295	56382295	+	Silent	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56382295	56382295	+	Silent	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPBWR2	2832	broad.mit.edu	37	20	62737699	62737699	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPBWR2	2832	broad.mit.edu	37	20	62737699	62737699	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1	4864	broad.mit.edu	37	18	21118658	21118658	+	Intron	SNP	A	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1	4864	broad.mit.edu	37	18	21118658	21118658	+	Intron	SNP	A	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTN5	126147	broad.mit.edu	37	19	49172581	49172581	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107937895	107937895	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107937895	107937895	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101092628	101092628	+	Splice_Site	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF5	55998	broad.mit.edu	37	X	101092628	101092628	+	Splice_Site	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161969907	161969907	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2B	25903	broad.mit.edu	37	1	161969907	161969907	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN1LW	5956	broad.mit.edu	37	X	153416513	153416513	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN1LW	5956	broad.mit.edu	37	X	153416513	153416513	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10H5	284433	broad.mit.edu	37	19	15904894	15904894	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10H5	284433	broad.mit.edu	37	19	15904894	15904894	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A14	135941	broad.mit.edu	37	7	143826479	143826479	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A14	135941	broad.mit.edu	37	7	143826479	143826479	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C15	81309	broad.mit.edu	37	11	55321922	55321922	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4C15	81309	broad.mit.edu	37	11	55321922	55321922	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52A4	390053	broad.mit.edu	37	11	5142232	5142232	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52A4	390053	broad.mit.edu	37	11	5142232	5142232	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B12	390191	broad.mit.edu	37	11	58207039	58207039	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5B12	390191	broad.mit.edu	37	11	58207039	58207039	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D16	390144	broad.mit.edu	37	11	55607016	55607016	+	Silent	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D16	390144	broad.mit.edu	37	11	55607016	55607016	+	Silent	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L2	26338	broad.mit.edu	37	11	55595148	55595148	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L2	26338	broad.mit.edu	37	11	55595148	55595148	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M11	219487	broad.mit.edu	37	11	56310155	56310155	+	Silent	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5M11	219487	broad.mit.edu	37	11	56310155	56310155	+	Silent	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL6	114880	broad.mit.edu	37	2	179257093	179257093	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL6	114880	broad.mit.edu	37	2	179257093	179257093	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXER1	165140	broad.mit.edu	37	2	42990262	42990262	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXER1	165140	broad.mit.edu	37	2	42990262	42990262	+	Missense_Mutation	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALB2	79728	broad.mit.edu	37	16	23641517	23641517	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALB2	79728	broad.mit.edu	37	16	23641517	23641517	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALLD	23022	broad.mit.edu	37	4	169432647	169432647	+	5'UTR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALLD	23022	broad.mit.edu	37	4	169432647	169432647	+	5'UTR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX3	5077	broad.mit.edu	37	2	223085764	223085764	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX3	5077	broad.mit.edu	37	2	223085764	223085764	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP3	54039	broad.mit.edu	37	21	47350837	47350837	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP3	54039	broad.mit.edu	37	21	47350837	47350837	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91134239	91134239	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91134239	91134239	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140255890	140255890	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140255900	140255900	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB2	56103	broad.mit.edu	37	5	140741283	140741283	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGB2	56103	broad.mit.edu	37	5	140741283	140741283	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4B	5142	broad.mit.edu	37	1	66723566	66723566	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4B	5142	broad.mit.edu	37	1	66723566	66723566	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX16	9409	broad.mit.edu	37	11	45937766	45937766	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX16	9409	broad.mit.edu	37	11	45937766	45937766	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGA5	5222	broad.mit.edu	37	11	61017381	61017381	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGA5	5222	broad.mit.edu	37	11	61017381	61017381	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGF	5228	broad.mit.edu	37	14	75412834	75412834	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGF	5228	broad.mit.edu	37	14	75412834	75412834	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF14	9678	broad.mit.edu	37	7	11013900	11013900	+	5'UTR	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB2	90102	broad.mit.edu	37	3	111671462	111671462	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB2	90102	broad.mit.edu	37	3	111671462	111671462	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60505965	60505965	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60646292	60646292	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60505965	60505965	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLPP1	23239	broad.mit.edu	37	18	60646292	60646292	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PJA1	64219	broad.mit.edu	37	X	68381829	68381829	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PJA1	64219	broad.mit.edu	37	X	68381829	68381829	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	144991151	144991151	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	144991151	144991151	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB2	23654	broad.mit.edu	37	22	50722939	50722940	+	Intron	INS	-	C	C	rs146267024	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB3	5365	broad.mit.edu	37	X	153037582	153037582	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB3	5365	broad.mit.edu	37	X	153037582	153037582	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94691012	94691012	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNC1	10154	broad.mit.edu	37	12	94691012	94691012	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIP	5406	broad.mit.edu	37	10	118305595	118305595	+	Intron	SNP	T	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIP	5406	broad.mit.edu	37	10	118305595	118305595	+	Intron	SNP	T	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1A	25885	broad.mit.edu	37	2	86257402	86257402	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR2F	5435	broad.mit.edu	37	22	38352657	38352657	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMZP3	22932	broad.mit.edu	37	7	76254707	76254707	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POMZP3	22932	broad.mit.edu	37	7	76254707	76254707	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38154004	38154004	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38154004	38154004	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130832530	130832530	+	Missense_Mutation	SNP	C	A	A	rs2599795		TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130832530	130832530	+	Missense_Mutation	SNP	C	A	A	rs2599795		TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIP5K1	9677	broad.mit.edu	37	15	43827053	43827054	+	Missense_Mutation	DNP	TC	AG	AG			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R16B	26051	broad.mit.edu	37	20	37531189	37531189	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R16B	26051	broad.mit.edu	37	20	37531189	37531189	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM2	7799	broad.mit.edu	37	1	14105012	14105012	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM2	7799	broad.mit.edu	37	1	14105012	14105012	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDX4	10549	broad.mit.edu	37	X	23685884	23685884	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDX4	10549	broad.mit.edu	37	X	23685884	23685884	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43699270	43699270	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43708039	43708039	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43708174	43708174	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43699270	43699270	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43708039	43708039	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG4	5672	broad.mit.edu	37	19	43708174	43708174	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTEN	5728	broad.mit.edu	37	10	89624246	89624247	+	Frame_Shift_Ins	INS	-	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTEN	5728	broad.mit.edu	37	10	89624246	89624247	+	Frame_Shift_Ins	INS	-	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTER	9317	broad.mit.edu	37	10	16528647	16528647	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTER	9317	broad.mit.edu	37	10	16528647	16528647	+	Intron	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220162896	220162896	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220166239	220166239	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220162896	220162896	+	Intron	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN	5798	broad.mit.edu	37	2	220166239	220166239	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174781003	174781003	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGAP1L	9910	broad.mit.edu	37	1	174781003	174781003	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASIP1	54922	broad.mit.edu	37	19	49223941	49223941	+	3'UTR	SNP	A	T	T	rs77294797	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASIP1	54922	broad.mit.edu	37	19	49223941	49223941	+	3'UTR	SNP	A	T	T	rs77294797	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP5	5929	broad.mit.edu	37	1	205065903	205065903	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP5	5929	broad.mit.edu	37	1	205065903	205065903	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM47	54502	broad.mit.edu	37	4	40434729	40434729	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM47	54502	broad.mit.edu	37	4	40434729	40434729	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBMX	27316	broad.mit.edu	37	X	135961601	135961602	+	5'UTR	DEL	GG	-	-			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3G	130120	broad.mit.edu	37	2	79254064	79254064	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3G	130120	broad.mit.edu	37	2	79254064	79254064	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPS2	9185	broad.mit.edu	37	X	17167141	17167141	+	3'UTR	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPS2	9185	broad.mit.edu	37	X	17167141	17167141	+	3'UTR	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGNEF	64283	broad.mit.edu	37	5	73163757	73163757	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGNEF	64283	broad.mit.edu	37	5	73163757	73163757	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOD	29984	broad.mit.edu	37	11	66834240	66834240	+	Silent	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOD	29984	broad.mit.edu	37	11	66834240	66834240	+	Silent	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGRIP1	57096	broad.mit.edu	37	14	21811336	21811336	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGRIP1	57096	broad.mit.edu	37	14	21811336	21811336	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38976304	38976304	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	39019689	39019689	+	Silent	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	38976304	38976304	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR1	6261	broad.mit.edu	37	19	39019689	39019689	+	Silent	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23929354	23929354	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SACS	26278	broad.mit.edu	37	13	23929354	23929354	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML2	10389	broad.mit.edu	37	X	18264985	18264985	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML2	10389	broad.mit.edu	37	X	18264985	18264985	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML4	256380	broad.mit.edu	37	6	108041851	108041851	+	Intron	SNP	C	T	T	rs141326797	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML4	256380	broad.mit.edu	37	6	108041851	108041851	+	Intron	SNP	C	T	T	rs141326797	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNN1B	6338	broad.mit.edu	37	16	23382700	23382700	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCNN1B	6338	broad.mit.edu	37	16	23382700	23382700	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCP2	6342	broad.mit.edu	37	1	53461400	53461400	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCP2	6342	broad.mit.edu	37	1	53461400	53461400	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHB	6390	broad.mit.edu	37	1	17345264	17345264	+	3'UTR	SNP	T	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHB	6390	broad.mit.edu	37	1	17345334	17345334	+	3'UTR	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHB	6390	broad.mit.edu	37	1	17345264	17345264	+	3'UTR	SNP	T	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDHB	6390	broad.mit.edu	37	1	17345334	17345334	+	3'UTR	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24D	9871	broad.mit.edu	37	4	119745815	119745815	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24D	9871	broad.mit.edu	37	4	119745815	119745815	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3C	10512	broad.mit.edu	37	7	80418660	80418660	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3C	10512	broad.mit.edu	37	7	80418660	80418660	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9066574	9066574	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9066574	9066574	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6B	10501	broad.mit.edu	37	19	4558145	4558145	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6B	10501	broad.mit.edu	37	19	4558145	4558145	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP3	26168	broad.mit.edu	37	17	7474715	7474715	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA13	388007	broad.mit.edu	37	14	95111393	95111393	+	3'UTR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA13	388007	broad.mit.edu	37	14	95111393	95111393	+	3'UTR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135205014	135205014	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETX	23064	broad.mit.edu	37	9	135205014	135205014	+	Silent	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGEF	26084	broad.mit.edu	37	3	153909105	153909105	+	Silent	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGEF	26084	broad.mit.edu	37	3	153909105	153909105	+	Silent	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPA	140885	broad.mit.edu	37	20	1902395	1902395	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPA	140885	broad.mit.edu	37	20	1902395	1902395	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A4	121260	broad.mit.edu	37	12	129294126	129294126	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A4	121260	broad.mit.edu	37	12	129294126	129294126	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A32	81034	broad.mit.edu	37	8	104426906	104426907	+	Intron	DEL	AC	-	-	rs59125759		TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A5	292	broad.mit.edu	37	X	118604231	118604231	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A5	292	broad.mit.edu	37	X	118604231	118604231	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A8	146167	broad.mit.edu	37	16	84046578	84046578	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A8	146167	broad.mit.edu	37	16	84046578	84046578	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1AP	22950	broad.mit.edu	37	2	27910906	27910910	+	Intron	DEL	TTCAT	-	-	rs76173523		TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A7	9497	broad.mit.edu	37	3	27462219	27462219	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A7	9497	broad.mit.edu	37	3	27462219	27462219	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A7	6534	broad.mit.edu	37	5	149578957	149578957	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A7	6534	broad.mit.edu	37	5	149578957	149578957	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A9	6536	broad.mit.edu	37	1	44475796	44475796	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98816908	98816908	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98816908	98816908	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMPD4	55627	broad.mit.edu	37	2	130912971	130912971	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNHG1	23642	broad.mit.edu	37	11	62622689	62622689	+	RNA	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNHG1	23642	broad.mit.edu	37	11	62622689	62622689	+	RNA	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25325396	25325396	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25325396	25325396	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN5	494197	broad.mit.edu	37	X	52825631	52825631	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN5	494197	broad.mit.edu	37	X	52825631	52825631	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG20	23111	broad.mit.edu	37	13	36903770	36903770	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPG20	23111	broad.mit.edu	37	13	36903770	36903770	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65268586	65268586	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65268586	65268586	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPRB	58477	broad.mit.edu	37	3	133524652	133524652	+	5'Flank	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPRB	58477	broad.mit.edu	37	3	133524652	133524652	+	5'Flank	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX2	27286	broad.mit.edu	37	X	99917179	99917179	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRPX2	27286	broad.mit.edu	37	X	99917179	99917179	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130068703	130068703	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130068703	130068703	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA1	6489	broad.mit.edu	37	12	22408291	22408292	+	Missense_Mutation	DNP	GC	AA	AA			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA1	6489	broad.mit.edu	37	12	22408291	22408292	+	Missense_Mutation	DNP	GC	AA	AA			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK24	8428	broad.mit.edu	37	13	99134596	99134596	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK24	8428	broad.mit.edu	37	13	99134596	99134596	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD5	26032	broad.mit.edu	37	3	33216515	33216515	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD5	26032	broad.mit.edu	37	3	33216515	33216515	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64574293	64574293	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64686021	64686021	+	Missense_Mutation	SNP	G	T	T	rs148199074	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64574293	64574293	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64686021	64686021	+	Missense_Mutation	SNP	G	T	T	rs148199074	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYP	6855	broad.mit.edu	37	X	49047927	49047927	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYP	6855	broad.mit.edu	37	X	49047927	49047927	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7335004	7335004	+	Silent	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7335004	7335004	+	Silent	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85436910	85436910	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85436910	85436910	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4	6874	broad.mit.edu	37	20	60587990	60587990	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4	6874	broad.mit.edu	37	20	60587990	60587990	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TALDO1	6888	broad.mit.edu	37	11	758936	758936	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TALDO1	6888	broad.mit.edu	37	11	758936	758936	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R5	54429	broad.mit.edu	37	7	141490127	141490127	+	5'UTR	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R5	54429	broad.mit.edu	37	7	141490127	141490127	+	5'UTR	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAZ	6901	broad.mit.edu	37	X	153641823	153641823	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAZ	6901	broad.mit.edu	37	X	153641823	153641823	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D7	51256	broad.mit.edu	37	6	13307827	13307827	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D7	51256	broad.mit.edu	37	6	13307827	13307827	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8	11138	broad.mit.edu	37	2	101650223	101650223	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D8	11138	broad.mit.edu	37	2	101650223	101650223	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX2	6909	broad.mit.edu	37	17	59480312	59480332	+	Intron	DEL	AGAGAGAGAGAGAGAGAGAGA	-	-	rs140392356	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF20	6942	broad.mit.edu	37	22	42610599	42610599	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF20	6942	broad.mit.edu	37	22	42610599	42610599	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRKH	11022	broad.mit.edu	37	1	151742560	151742588	+	3'UTR	DEL	GGAGAGGGAGACCATGGGGAGACGGAGAC	-	-	rs140076465	by1000genomes	TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMD4	91937	broad.mit.edu	37	5	156390073	156390073	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMD4	91937	broad.mit.edu	37	5	156390073	156390073	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE1	7088	broad.mit.edu	37	9	84200404	84200404	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE1	7088	broad.mit.edu	37	9	84200404	84200404	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM6SF1	53346	broad.mit.edu	37	15	83795502	83795502	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM6SF1	53346	broad.mit.edu	37	15	83795502	83795502	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM9SF1	10548	broad.mit.edu	37	14	24682634	24682634	+	Silent	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM9SF1	10548	broad.mit.edu	37	14	24682634	24682634	+	Silent	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO3	55002	broad.mit.edu	37	13	114154211	114154211	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO3	55002	broad.mit.edu	37	13	114154211	114154211	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132D	121256	broad.mit.edu	37	12	129559173	129559173	+	Silent	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM176B	28959	broad.mit.edu	37	7	150493537	150493537	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM176B	28959	broad.mit.edu	37	7	150493537	150493537	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM200A	114801	broad.mit.edu	37	6	130762134	130762134	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM200A	114801	broad.mit.edu	37	6	130762134	130762134	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM55B	90809	broad.mit.edu	37	14	20926713	20926713	+	3'UTR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM55B	90809	broad.mit.edu	37	14	20926713	20926713	+	3'UTR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11D	9407	broad.mit.edu	37	4	68708418	68708418	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11D	9407	broad.mit.edu	37	4	68708418	68708418	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC2	160335	broad.mit.edu	37	12	83358901	83358901	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC2	160335	broad.mit.edu	37	12	83358901	83358901	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175116129	175116129	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175116129	175116129	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175372526	175372526	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175372526	175372526	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOB2	10766	broad.mit.edu	37	22	41832839	41832839	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOB2	10766	broad.mit.edu	37	22	41832839	41832839	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOPORS	10210	broad.mit.edu	37	9	32541658	32541658	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOPORS	10210	broad.mit.edu	37	9	32541658	32541658	+	Missense_Mutation	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	11013061	11013061	+	Intron	SNP	A	C	C	rs9550298		TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAIP	10293	broad.mit.edu	37	3	49879316	49879316	+	Missense_Mutation	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM33	51592	broad.mit.edu	37	1	114969875	114969875	+	Silent	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM33	51592	broad.mit.edu	37	1	114969875	114969875	+	Silent	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM43	129868	broad.mit.edu	37	2	96259675	96259675	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM43	129868	broad.mit.edu	37	2	96259675	96259675	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC3	7222	broad.mit.edu	37	4	122853827	122853827	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC3	7222	broad.mit.edu	37	4	122853827	122853827	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116599248	116599248	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116599248	116599248	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV3	162514	broad.mit.edu	37	17	3436156	3436156	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV3	162514	broad.mit.edu	37	17	3436156	3436156	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142605804	142605804	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142605804	142605804	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31768037	31768037	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHZ3	57616	broad.mit.edu	37	19	31768037	31768037	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAXIP1	55815	broad.mit.edu	37	16	67860420	67860420	+	Silent	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAXIP1	55815	broad.mit.edu	37	16	67860331	67860331	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAXIP1	55815	broad.mit.edu	37	16	67860420	67860420	+	Silent	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPYL4	23270	broad.mit.edu	37	6	116574053	116574053	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPYL4	23270	broad.mit.edu	37	6	116574053	116574053	+	Silent	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC14	151613	broad.mit.edu	37	3	180322027	180322027	+	Silent	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC14	151613	broad.mit.edu	37	3	180322027	180322027	+	Silent	SNP	A	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC38	55020	broad.mit.edu	37	22	46671251	46671251	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC38	55020	broad.mit.edu	37	22	46671251	46671251	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL2	83887	broad.mit.edu	37	6	167753646	167753646	+	Silent	SNP	G	T	T	rs150930685		TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL2	83887	broad.mit.edu	37	6	167753646	167753646	+	Silent	SNP	G	T	T	rs150930685		TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179569987	179569987	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179569987	179569987	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2	55833	broad.mit.edu	37	9	33948372	33948372	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBAP2	55833	broad.mit.edu	37	9	33948372	33948372	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBOX5	22888	broad.mit.edu	37	20	3102775	3102775	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBOX5	22888	broad.mit.edu	37	20	3102775	3102775	+	Silent	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH1G	124590	broad.mit.edu	37	17	72915997	72915997	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH1G	124590	broad.mit.edu	37	17	72915997	72915997	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP11	8237	broad.mit.edu	37	X	47101795	47101795	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP11	8237	broad.mit.edu	37	X	47101795	47101795	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61633065	61633068	+	Frame_Shift_Del	DEL	CTCT	-	-			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61633065	61633068	+	Frame_Shift_Del	DEL	CTCT	-	-			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP20	27340	broad.mit.edu	37	12	101760205	101760205	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UTP20	27340	broad.mit.edu	37	12	101760205	101760205	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55259356	55259356	+	IGR	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56216750	56216750	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	37935688	37935688	+	IGR	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111591079	111591079	+	IGR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19955469	19955469	+	IGR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	102144349	102144349	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20138068	20138068	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	52755757	52755757	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	77639540	77639540	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33071476	33071476	+	IGR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	85312498	85312498	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21544401	21544401	+	IGR	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	15165514	15165514	+	IGR	SNP	T	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22497900	22497900	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	111922826	111922826	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	39175780	39175780	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	91489686	91489686	+	IGR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	39466380	39466380	+	IGR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	106961137	106961137	+	IGR	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	195665005	195665005	+	IGR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	72933697	72933697	+	IGR	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63683901	63683901	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69862640	69862640	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	143131941	143131941	+	IGR	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	180526332	180526332	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40067112	40067112	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75375528	75375528	+	IGR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	104466811	104466811	+	IGR	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	158663328	158663328	+	IGR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	32427673	32427673	+	IGR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	125934191	125934191	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	61332677	61332677	+	IGR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108813018	108813018	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79828837	79828837	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99406435	99406435	+	IGR	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55259356	55259356	+	IGR	SNP	A	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56216750	56216750	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	37935688	37935688	+	IGR	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111591079	111591079	+	IGR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19955469	19955469	+	IGR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	102144349	102144349	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20138068	20138068	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	52755757	52755757	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	77639540	77639540	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	85312498	85312498	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21544401	21544401	+	IGR	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	15165514	15165514	+	IGR	SNP	T	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	832428	832428	+	IGR	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22497900	22497900	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	6209905	6209905	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	111922826	111922826	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	172718415	172718415	+	IGR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	39175780	39175780	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	91489686	91489686	+	IGR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	39466380	39466380	+	IGR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	106961137	106961137	+	IGR	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	195665005	195665005	+	IGR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	72933697	72933697	+	IGR	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	153979403	153979403	+	IGR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63683901	63683901	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69862640	69862640	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	143131941	143131941	+	IGR	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	180526332	180526332	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40067112	40067112	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	75375528	75375528	+	IGR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	104466811	104466811	+	IGR	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	158663328	158663328	+	IGR	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	32427673	32427673	+	IGR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	68693727	68693727	+	IGR	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	125934191	125934191	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	61332677	61332677	+	IGR	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108813018	108813018	+	IGR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	79828837	79828837	+	IGR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99406435	99406435	+	IGR	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAPA	9218	broad.mit.edu	37	18	9954222	9954222	+	3'UTR	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VEZT	55591	broad.mit.edu	37	12	95680561	95680562	+	Intron	INS	-	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIPR1	7433	broad.mit.edu	37	3	42569343	42569343	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6126200	6126200	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6126200	6126200	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR45	11152	broad.mit.edu	37	X	48932788	48932788	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR5B	54554	broad.mit.edu	37	3	122134359	122134359	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR5B	54554	broad.mit.edu	37	3	122134359	122134359	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR74	54663	broad.mit.edu	37	11	62606910	62606910	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR74	54663	broad.mit.edu	37	11	62606910	62606910	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWOX	51741	broad.mit.edu	37	16	78389319	78389319	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN2	22803	broad.mit.edu	37	20	21346035	21346035	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN2	22803	broad.mit.edu	37	20	21346035	21346035	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED4	9889	broad.mit.edu	37	22	50277426	50277426	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED4	9889	broad.mit.edu	37	22	50277426	50277426	+	Missense_Mutation	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46539475	46539475	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46559778	46559778	+	Silent	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46539475	46539475	+	Missense_Mutation	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H13	23091	broad.mit.edu	37	13	46559778	46559778	+	Silent	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72832636	72832636	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP57	346171	broad.mit.edu	37	6	29644805	29644805	+	5'UTR	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP57	346171	broad.mit.edu	37	6	29644805	29644805	+	5'UTR	SNP	T	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ2	83637	broad.mit.edu	37	7	44806322	44806322	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMIZ2	83637	broad.mit.edu	37	7	44806322	44806322	+	Intron	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF135	7694	broad.mit.edu	37	19	58578646	58578646	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF135	7694	broad.mit.edu	37	19	58578646	58578646	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF17	7565	broad.mit.edu	37	19	57930986	57930986	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF17	7565	broad.mit.edu	37	19	57930986	57930986	+	Intron	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF2	7549	broad.mit.edu	37	2	95847781	95847782	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF2	7549	broad.mit.edu	37	2	95847781	95847782	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF318	24149	broad.mit.edu	37	6	43333100	43333100	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF318	24149	broad.mit.edu	37	6	43333100	43333100	+	Missense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF341	84905	broad.mit.edu	37	20	32354597	32354597	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF407	55628	broad.mit.edu	37	18	72775242	72775242	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF407	55628	broad.mit.edu	37	18	72775242	72775242	+	Missense_Mutation	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF438	220929	broad.mit.edu	37	10	31134418	31134418	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF438	220929	broad.mit.edu	37	10	31134418	31134418	+	Missense_Mutation	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF667	63934	broad.mit.edu	37	19	56952614	56952614	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF667	63934	broad.mit.edu	37	19	56952614	56952614	+	Missense_Mutation	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF679	168417	broad.mit.edu	37	7	63709539	63709539	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF679	168417	broad.mit.edu	37	7	63709539	63709539	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF800	168850	broad.mit.edu	37	7	127014855	127014855	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF800	168850	broad.mit.edu	37	7	127014855	127014855	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185802747	185802747	+	Nonsense_Mutation	SNP	T	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804A	91752	broad.mit.edu	37	2	185802747	185802747	+	Nonsense_Mutation	SNP	T	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP1	22917	broad.mit.edu	37	11	60643148	60643148	+	3'UTR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP1	22917	broad.mit.edu	37	11	60643148	60643148	+	3'UTR	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	31125326	31125326	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102312093	102312093	+	RNA	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	85121434	85121434	+	RNA	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	90162562	90162562	+	3'UTR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133075760	133075760	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	65729085	65729085	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89434570	89434570	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9242213	9242213	+	Missense_Mutation	SNP	G	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	154045487	154045487	+	RNA	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	40695133	40695133	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-11B-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	31125326	31125326	+	Intron	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102312093	102312093	+	RNA	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	85121434	85121434	+	RNA	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	90162562	90162562	+	3'UTR	SNP	G	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133075760	133075760	+	Intron	SNP	C	G	G			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	65729085	65729085	+	Intron	SNP	G	C	C			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89434570	89434570	+	Intron	SNP	C	T	T			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	154045487	154045487	+	RNA	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	40695133	40695133	+	Intron	SNP	C	A	A			TCGA-44-3398-01A-01D-1105-08	TCGA-44-3398-10A-01D-1105-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
