Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A2M	2	broad.mit.edu	37	12	9243991	9243991	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67098950	67098950	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67108483	67108483	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66913617	66913617	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB7	22	broad.mit.edu	37	X	74289036	74289036	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48120767	48120767	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCD4	5826	broad.mit.edu	37	14	74757236	74757236	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI2	10152	broad.mit.edu	37	2	204259513	204259513	+	Silent	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABLIM2	84448	broad.mit.edu	37	4	8000404	8000404	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112186168	112186168	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAN	176	broad.mit.edu	37	15	89392759	89392759	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAP1	9744	broad.mit.edu	37	17	7245164	7245164	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	32364575	32364575	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTR1A	10121	broad.mit.edu	37	10	104250467	104250467	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM2	2515	broad.mit.edu	37	8	39624318	39624318	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106579097	106579097	+	RNA	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106967293	106967293	+	RNA	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107211243	107211243	+	RNA	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77356285	77356285	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS1	9510	broad.mit.edu	37	21	28212482	28212482	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS7	11173	broad.mit.edu	37	15	79068701	79068701	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL1	92949	broad.mit.edu	37	9	18505002	18505002	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY6	112	broad.mit.edu	37	12	49165906	49165906	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY6	112	broad.mit.edu	37	12	49170959	49170960	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131862072	131862072	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131949309	131949309	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL2	79841	broad.mit.edu	37	11	47726214	47726214	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	50310416	50310416	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT4	56895	broad.mit.edu	37	6	161575192	161575192	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT9	84803	broad.mit.edu	37	4	84518075	84518075	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCYL2	23382	broad.mit.edu	37	7	129053543	129053543	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105410286	105410286	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIFM1	9131	broad.mit.edu	37	X	129290567	129290567	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIPL1	23746	broad.mit.edu	37	17	6330265	6330265	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP4	8852	broad.mit.edu	37	X	49965551	49965551	+	5'UTR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKR1C1	1645	broad.mit.edu	37	10	5019784	5019784	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56245988	56245988	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPPL2	251	broad.mit.edu	37	2	233274340	233274340	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMHR2	269	broad.mit.edu	37	12	53818455	53818455	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMOTL2	51421	broad.mit.edu	37	3	134084613	134084613	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANGEL1	23357	broad.mit.edu	37	14	77275724	77275724	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114199556	114199556	+	Intron	SNP	T	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKIB1	54467	broad.mit.edu	37	7	92021501	92021501	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD17	26057	broad.mit.edu	37	4	74123893	74123893	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20A4	728747	broad.mit.edu	37	9	69420299	69420299	+	Missense_Mutation	SNP	A	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD36B	57730	broad.mit.edu	37	2	98195478	98195478	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	5672645	5672645	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANTXR1	84168	broad.mit.edu	37	2	69300318	69300318	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA1	301	broad.mit.edu	37	9	75780198	75780198	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APEX2	27301	broad.mit.edu	37	X	55033653	55033653	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
API5	8539	broad.mit.edu	37	11	43364037	43364037	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOA4	337	broad.mit.edu	37	11	116692349	116692349	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGEF2	10564	broad.mit.edu	37	20	47569110	47569110	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156955931	156955931	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF2	9181	broad.mit.edu	37	1	155933032	155933032	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASS1	445	broad.mit.edu	37	9	133346041	133346041	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119625875	119625875	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A3	478	broad.mit.edu	37	19	42492722	42492722	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7A	538	broad.mit.edu	37	X	77275806	77275806	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP7B	540	broad.mit.edu	37	13	52523778	52523778	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATRX	546	broad.mit.edu	37	X	76920220	76920220	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUTS2	26053	broad.mit.edu	37	7	69364220	69364220	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AUTS2	26053	broad.mit.edu	37	7	69583145	69583145	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP2L2	80115	broad.mit.edu	37	22	38503679	38503679	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS2	583	broad.mit.edu	37	16	56534706	56534706	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBX	56987	broad.mit.edu	37	3	107510242	107510242	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS2	10286	broad.mit.edu	37	1	115124154	115124154	+	Missense_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	58946045	58946045	+	Splice_Site	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136599090	136599090	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND2	139105	broad.mit.edu	37	X	18183163	18183163	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA1	672	broad.mit.edu	37	17	41297023	41297023	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRCA2	675	broad.mit.edu	37	13	32937423	32937423	+	Nonsense_Mutation	SNP	C	A	A	rs80359048		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRI3BP	140707	broad.mit.edu	37	12	125509731	125509731	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTAF1	9044	broad.mit.edu	37	10	93788545	93788545	+	Splice_Site	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTBD10	84280	broad.mit.edu	37	11	13410787	13410787	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100615743	100615743	+	Missense_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100617635	100617635	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTK	695	broad.mit.edu	37	X	100630266	100630266	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTN3A3	10384	broad.mit.edu	37	6	26448954	26448954	+	Splice_Site	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf128	170371	broad.mit.edu	37	10	50374864	50374864	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf18	54906	broad.mit.edu	37	10	5781857	5781857	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf68	79741	broad.mit.edu	37	10	33135305	33135305	+	Missense_Mutation	SNP	G	T	T	rs144109242		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf68	79741	broad.mit.edu	37	10	33168482	33168482	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf70	85016	broad.mit.edu	37	11	101937111	101937111	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf82	220042	broad.mit.edu	37	11	82625779	82625779	+	5'UTR	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf23	90488	broad.mit.edu	37	12	107360877	107360877	+	Intron	DEL	T	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf50	160419	broad.mit.edu	37	12	88391734	88391734	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf145	145508	broad.mit.edu	37	14	80997210	80997210	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf39	317761	broad.mit.edu	37	14	60951811	60951811	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf57	90416	broad.mit.edu	37	15	40857055	40857055	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf58	64755	broad.mit.edu	37	16	31504879	31504879	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf34	374864	broad.mit.edu	37	18	30803130	30803130	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf61	56006	broad.mit.edu	37	19	44251914	44251914	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1S	716	broad.mit.edu	37	12	7173950	7173950	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf175	374977	broad.mit.edu	37	1	55118514	55118514	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf26	54823	broad.mit.edu	37	1	185191096	185191096	+	Missense_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf52	148423	broad.mit.edu	37	1	85724262	85724262	+	Silent	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf186	149954	broad.mit.edu	37	20	31683053	31683053	+	Intron	DEL	G	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf91	54149	broad.mit.edu	37	21	19165870	19165870	+	Silent	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf39	92749	broad.mit.edu	37	2	26652528	26652528	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf70	285382	broad.mit.edu	37	3	184800747	184800747	+	3'UTR	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf58	133874	broad.mit.edu	37	5	169673105	169673105	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf165	154313	broad.mit.edu	37	6	88123581	88123581	+	Missense_Mutation	SNP	G	T	T	rs140621996		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf22	492307	broad.mit.edu	37	8	49986879	49986879	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf80	389643	broad.mit.edu	37	8	27886883	27886883	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf93	203238	broad.mit.edu	37	9	15784564	15784564	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACHD1	57685	broad.mit.edu	37	1	65157011	65157011	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1B	774	broad.mit.edu	37	9	140948480	140948480	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2622162	2622162	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181725204	181725204	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81693536	81693536	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62467264	62467264	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62739044	62739044	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB1	793	broad.mit.edu	37	8	91072931	91072931	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAND1	55832	broad.mit.edu	37	12	67691560	67691560	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAP2	10486	broad.mit.edu	37	6	17539605	17539605	+	Nonsense_Mutation	SNP	G	T	T	rs147812744		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASK	8573	broad.mit.edu	37	X	41383314	41383314	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPERG	57828	broad.mit.edu	37	19	38858712	38858712	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CBFA2T3	863	broad.mit.edu	37	16	88951655	88951655	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC148	130940	broad.mit.edu	37	2	159195539	159195539	+	Missense_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC158	339965	broad.mit.edu	37	4	77288728	77288728	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111319117	111319117	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCKBR	887	broad.mit.edu	37	11	6291420	6291420	+	Frame_Shift_Del	DEL	C	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158325783	158325783	+	Missense_Mutation	SNP	C	A	A	rs73012021	by1000genomes	TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5L	922	broad.mit.edu	37	1	157805822	157805822	+	Missense_Mutation	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD7	924	broad.mit.edu	37	17	80274796	80274796	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD97	976	broad.mit.edu	37	19	14508123	14508123	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDCA2	157313	broad.mit.edu	37	8	25341439	25341439	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH13	1012	broad.mit.edu	37	16	83378632	83378632	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH16	1014	broad.mit.edu	37	16	66945140	66945140	+	Silent	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH19	28513	broad.mit.edu	37	18	64172379	64172379	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25543368	25543368	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH2	1000	broad.mit.edu	37	18	25616525	25616525	+	Intron	DEL	C	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK13	8621	broad.mit.edu	37	7	40127867	40127867	+	Missense_Mutation	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL5	6792	broad.mit.edu	37	X	18622582	18622582	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA1	1990	broad.mit.edu	37	12	51740263	51740263	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP192	55125	broad.mit.edu	37	18	13049430	13049430	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFC1B	653275	broad.mit.edu	37	2	131356256	131356256	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB1	114335	broad.mit.edu	37	19	49540076	49540076	+	5'UTR	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CGB8	94115	broad.mit.edu	37	19	49552164	49552164	+	5'UTR	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHCHD6	84303	broad.mit.edu	37	3	126486092	126486092	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6194814	6194814	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD9	80205	broad.mit.edu	37	16	53341597	53341597	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHFR	55743	broad.mit.edu	37	12	133420622	133420622	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHMP5	51510	broad.mit.edu	37	9	33265066	33265066	+	5'UTR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNB3	1142	broad.mit.edu	37	8	42565481	42565481	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRND	1144	broad.mit.edu	37	2	233391241	233391241	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST7	56548	broad.mit.edu	37	X	46433945	46433945	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKAP2	26586	broad.mit.edu	37	13	53036058	53036058	+	Missense_Mutation	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA1	1179	broad.mit.edu	37	1	86954799	86954799	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC1B	51266	broad.mit.edu	37	12	10150960	10150960	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLIP2	7461	broad.mit.edu	37	7	73795260	73795260	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNBD1	168975	broad.mit.edu	37	8	88249219	88249220	+	Missense_Mutation	DNP	TG	GA	GA			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGA3	1261	broad.mit.edu	37	2	99012551	99012551	+	Missense_Mutation	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT3	4849	broad.mit.edu	37	19	54646691	54646691	+	5'UTR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN5	53942	broad.mit.edu	37	11	99827757	99827757	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147815474	147815474	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125204514	125204514	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL10A1	1300	broad.mit.edu	37	6	116441292	116441292	+	Missense_Mutation	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33138073	33138073	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL13A1	1305	broad.mit.edu	37	10	71655416	71655416	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL13A1	1305	broad.mit.edu	37	10	71686992	71686992	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121259871	121259871	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105817971	105817971	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL18A1	80781	broad.mit.edu	37	21	46914422	46914422	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70890390	70890390	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL24A1	255631	broad.mit.edu	37	1	86341089	86341089	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189868727	189868727	+	Missense_Mutation	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189876399	189876399	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189940032	189940032	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC12	81035	broad.mit.edu	37	18	348117	348117	+	Silent	SNP	G	C	C	rs143313397		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COMMD7	149951	broad.mit.edu	37	20	31291087	31291087	+	3'UTR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPE	11316	broad.mit.edu	37	19	19010790	19010790	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPS2	9318	broad.mit.edu	37	15	49426281	49426281	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX6A2	1339	broad.mit.edu	37	16	31439056	31439056	+	3'UTR	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA4	51200	broad.mit.edu	37	7	129950739	129950739	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE6	9362	broad.mit.edu	37	14	24545800	24545801	+	Intron	DNP	CC	AA	AA			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXCR1	53336	broad.mit.edu	37	X	88008544	88008544	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRLF2	64109	broad.mit.edu	37	X	1321467	1321467	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	87022230	87022230	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRP	1401	broad.mit.edu	37	1	159683541	159683541	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYBG3	131544	broad.mit.edu	37	3	97595800	97595800	+	5'Flank	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19297443	19297443	+	Splice_Site	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34554532	34554532	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34631410	34631410	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113246614	113246614	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113254143	113254143	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSPG4	1464	broad.mit.edu	37	15	75981627	75981627	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST2	1470	broad.mit.edu	37	20	23806089	23806089	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST2	1470	broad.mit.edu	37	20	23807013	23807013	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSG	1511	broad.mit.edu	37	14	25044512	25044512	+	Silent	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16955844	16955844	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX2	23316	broad.mit.edu	37	12	111785687	111785687	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf59	286464	broad.mit.edu	37	X	36122645	36122645	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYBB	1536	broad.mit.edu	37	X	37664382	37664382	+	Frame_Shift_Del	DEL	C	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP19A1	1588	broad.mit.edu	37	15	51507397	51507397	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4A11	1579	broad.mit.edu	37	1	47398461	47398461	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F22	126410	broad.mit.edu	37	19	15660110	15660110	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAAM2	23500	broad.mit.edu	37	6	39869018	39869018	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39390615	39390615	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBNL	28988	broad.mit.edu	37	7	44092438	44092438	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDR2	4921	broad.mit.edu	37	1	162689027	162689027	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX27	55661	broad.mit.edu	37	20	47853133	47853133	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1B	163486	broad.mit.edu	37	1	197621405	197621405	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2C	163259	broad.mit.edu	37	1	115168229	115168229	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC1B	55789	broad.mit.edu	37	5	59983058	59983058	+	Intron	DEL	G	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	31200972	31200972	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32305735	32305735	+	Silent	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32407765	32407765	+	Silent	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL2	23312	broad.mit.edu	37	15	51755682	51755682	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196912041	196912041	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK4	9732	broad.mit.edu	37	7	111368560	111368560	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPEP2	64174	broad.mit.edu	37	16	68023932	68023932	+	Intron	DEL	C	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPY19L2P1	554236	broad.mit.edu	37	7	35131593	35131593	+	Intron	SNP	A	T	T	rs112081566		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28964992	28964992	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG4	147409	broad.mit.edu	37	18	28979267	28979267	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP27	92235	broad.mit.edu	37	1	167086711	167086711	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102449829	102449829	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158141058	158141058	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECD	11319	broad.mit.edu	37	10	74899485	74899485	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECE2	9718	broad.mit.edu	37	3	183994288	183994288	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGLN3	112399	broad.mit.edu	37	14	34396240	34396240	+	Splice_Site	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C3	192669	broad.mit.edu	37	1	36501854	36501854	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C3	192669	broad.mit.edu	37	1	36505882	36505882	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3H	8667	broad.mit.edu	37	8	117658622	117658622	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELMO1	9844	broad.mit.edu	37	7	37156733	37156733	+	Intron	SNP	C	A	A	rs115122191	by1000genomes	TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELTD1	64123	broad.mit.edu	37	1	79383572	79383572	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EN1	2019	broad.mit.edu	37	2	119604045	119604045	+	Silent	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENGASE	64772	broad.mit.edu	37	17	77081978	77081978	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22922539	22922539	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPX	8288	broad.mit.edu	37	17	56277625	56277625	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESYT2	57488	broad.mit.edu	37	7	158534254	158534254	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVX2	344191	broad.mit.edu	37	2	176948097	176948097	+	Silent	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXD1	161829	broad.mit.edu	37	15	41509065	41509065	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC1	55763	broad.mit.edu	37	4	56726475	56726475	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP9	646480	broad.mit.edu	37	8	82370629	82370629	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM108A1	81926	broad.mit.edu	37	19	1877698	1877698	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM122B	159090	broad.mit.edu	37	X	133922956	133922956	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM122C	159091	broad.mit.edu	37	X	133988158	133988158	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM160A2	84067	broad.mit.edu	37	11	6236055	6236055	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM160B1	57700	broad.mit.edu	37	10	116608455	116608455	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM189A1	23359	broad.mit.edu	37	15	29526451	29526451	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM40B	57464	broad.mit.edu	37	7	129103845	129103845	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM45B	55855	broad.mit.edu	37	X	129629173	129629173	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47B	170062	broad.mit.edu	37	X	34962613	34962613	+	Silent	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM82B	51115	broad.mit.edu	37	8	87498631	87498631	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM82B	51115	broad.mit.edu	37	8	87498840	87498840	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCB	2187	broad.mit.edu	37	X	14868465	14868465	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92231524	92231524	+	Intron	SNP	C	A	A	rs150302175	by1000genomes	TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92495099	92495099	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92531183	92531183	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92531207	92531207	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127641204	127641204	+	Silent	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO43	286151	broad.mit.edu	37	8	101153696	101153696	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXW8	26259	broad.mit.edu	37	12	117426644	117426644	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCAR	2204	broad.mit.edu	37	19	55401176	55401176	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FETUB	26998	broad.mit.edu	37	3	186364046	186364046	+	Missense_Mutation	SNP	G	C	C	rs6785067	byFrequency;by1000genomes	TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHOD3	80206	broad.mit.edu	37	18	34310772	34310772	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FIZ1	84922	broad.mit.edu	37	19	56104097	56104097	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152275876	152275876	+	Missense_Mutation	SNP	C	T	T	rs145079750		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152275883	152275883	+	Missense_Mutation	SNP	C	A	A	rs140464988		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152276645	152276645	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152282768	152282769	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMNL2	114793	broad.mit.edu	37	2	153246591	153246592	+	Intron	DNP	GG	TT	TT			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO5	2330	broad.mit.edu	37	1	146687287	146687287	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1	2332	broad.mit.edu	37	X	147009952	147009952	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMR1	2332	broad.mit.edu	37	X	147013828	147013828	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG1B	284802	broad.mit.edu	37	20	29628199	29628199	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32836651	32836651	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT3	2525	broad.mit.edu	37	19	5843640	5843641	+	3'UTR	DNP	CC	AA	AA			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD7	53822	broad.mit.edu	37	19	35642489	35642489	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD7	53822	broad.mit.edu	37	19	35642591	35642591	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39169404	39169404	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FZD7	8324	broad.mit.edu	37	2	202899689	202899689	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR1	2550	broad.mit.edu	37	6	29599392	29599392	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26812850	26812850	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL5	168391	broad.mit.edu	37	7	151680307	151680307	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL5	168391	broad.mit.edu	37	7	151680312	151680312	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GCLC	2729	broad.mit.edu	37	6	53385814	53385814	+	Intron	DEL	T	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF2	2658	broad.mit.edu	37	10	48414122	48414122	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDF2	2658	broad.mit.edu	37	10	48416440	48416440	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GGH	8836	broad.mit.edu	37	8	63927974	63927974	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHITM	27069	broad.mit.edu	37	10	85904649	85904649	+	Silent	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHR	2690	broad.mit.edu	37	5	42718832	42718832	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIMAP7	168537	broad.mit.edu	37	7	150209771	150209771	+	5'Flank	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA4	441509	broad.mit.edu	37	X	102968324	102968324	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLS2	27165	broad.mit.edu	37	12	56865309	56865309	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GORASP2	26003	broad.mit.edu	37	2	171804844	171804845	+	Intron	INS	-	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPATCH2	55105	broad.mit.edu	37	1	217622577	217622577	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC3	2719	broad.mit.edu	37	X	132887866	132887866	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135431279	135431279	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47682320	47682320	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR141	353345	broad.mit.edu	37	7	37780793	37780793	+	Missense_Mutation	SNP	C	A	A	rs146749644	byFrequency	TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR148	344561	broad.mit.edu	37	2	131486929	131486929	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR158	57512	broad.mit.edu	37	10	25701420	25701420	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR85	54329	broad.mit.edu	37	7	112723599	112723599	+	3'UTR	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRC6A	222545	broad.mit.edu	37	6	117117030	117117030	+	Intron	SNP	T	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAMD1B	57476	broad.mit.edu	37	11	123475936	123475936	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRB14	2888	broad.mit.edu	37	2	165353427	165353427	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREM2	64388	broad.mit.edu	37	1	240656615	240656615	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA3	2892	broad.mit.edu	37	X	122616858	122616858	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87407154	87407155	+	Splice_Site	DNP	CC	AA	AA			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37271752	37271752	+	Missense_Mutation	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK4	2900	broad.mit.edu	37	11	120807084	120807084	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK5	2901	broad.mit.edu	37	19	42563598	42563598	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIP2	80852	broad.mit.edu	37	3	14552931	14552931	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM1	2911	broad.mit.edu	37	6	146350653	146350653	+	5'UTR	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108673766	108673766	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYG2	8908	broad.mit.edu	37	X	2773257	2773257	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAO1	54363	broad.mit.edu	37	20	7921091	7921091	+	5'UTR	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCFC2	29915	broad.mit.edu	37	12	104492250	104492250	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45267396	45267396	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR1	55127	broad.mit.edu	37	1	236746130	236746130	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93837765	93837765	+	Silent	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93839281	93839281	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65413572	65413572	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2P4	440362	broad.mit.edu	37	16	32163620	32163620	+	RNA	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2	8924	broad.mit.edu	37	15	28422209	28422209	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIF3A	64344	broad.mit.edu	37	19	46825041	46825041	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-A	3105	broad.mit.edu	37	6	29910607	29910607	+	Silent	SNP	G	C	C	rs72555397		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186010017	186010017	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186158963	186158963	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCLL1	54511	broad.mit.edu	37	6	55406914	55406914	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGCR	3156	broad.mit.edu	37	5	74652176	74652176	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE2	60495	broad.mit.edu	37	10	100995342	100995342	+	Missense_Mutation	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HRC	3270	broad.mit.edu	37	19	49657099	49657099	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22149978	22149978	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22165743	22165743	+	Intron	DEL	C	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR3B	9177	broad.mit.edu	37	11	113802831	113802831	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HUWE1	10075	broad.mit.edu	37	X	53652935	53652935	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71101239	71101239	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IDO2	169355	broad.mit.edu	37	8	39872871	39872871	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT46	56912	broad.mit.edu	37	11	118425705	118425705	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160499257	160499257	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1R2	7850	broad.mit.edu	37	2	102636286	102636286	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104650926	104650926	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAP	3556	broad.mit.edu	37	3	190347104	190347104	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IMPG1	3617	broad.mit.edu	37	6	76735002	76735002	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INADL	10207	broad.mit.edu	37	1	62288473	62288473	+	Intron	SNP	A	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP4A	3631	broad.mit.edu	37	2	99185059	99185059	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5J	27124	broad.mit.edu	37	22	31522949	31522949	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSIG1	3638	broad.mit.edu	37	7	155095541	155095541	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCK	124152	broad.mit.edu	37	16	19729830	19729830	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156503971	156503972	+	Intron	DNP	CC	AA	AA			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISM2	145501	broad.mit.edu	37	14	77942014	77942014	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA4	3676	broad.mit.edu	37	2	182360445	182360445	+	Intron	SNP	C	T	T	rs139960499	by1000genomes	TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA8	8516	broad.mit.edu	37	10	15572990	15572990	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAL	3683	broad.mit.edu	37	16	30510692	30510692	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAM	3684	broad.mit.edu	37	16	31340632	31340632	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1	3688	broad.mit.edu	37	10	33209284	33209284	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156679713	156679713	+	3'UTR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPK1	3705	broad.mit.edu	37	14	93408241	93408241	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPKC	80271	broad.mit.edu	37	19	41235228	41235228	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAK2	3717	broad.mit.edu	37	9	5030066	5030066	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP3	282973	broad.mit.edu	37	10	133967124	133967124	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JARID2	3720	broad.mit.edu	37	6	15496943	15496943	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMJD1C	221037	broad.mit.edu	37	10	64968213	64968213	+	Silent	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH3	57338	broad.mit.edu	37	16	87636700	87636700	+	5'UTR	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73848769	73848769	+	Silent	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73850219	73850219	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH2	3757	broad.mit.edu	37	7	150649748	150649748	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ2	3759	broad.mit.edu	37	17	68172048	68172048	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ3	3760	broad.mit.edu	37	2	155711698	155711698	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNT1	57582	broad.mit.edu	37	9	138670655	138670655	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36694348	36694348	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEAP1	9817	broad.mit.edu	37	19	10610099	10610099	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0090	23065	broad.mit.edu	37	1	19566877	19566877	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319L	79932	broad.mit.edu	37	1	35921600	35921600	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1210	57481	broad.mit.edu	37	X	118221771	118221771	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1310	55683	broad.mit.edu	37	2	97275366	97275366	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1467	57613	broad.mit.edu	37	12	13215867	13215867	+	Silent	SNP	C	T	T	rs146598933	byFrequency	TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1598	57698	broad.mit.edu	37	10	118671458	118671458	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	28956802	28956802	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF20B	9585	broad.mit.edu	37	10	91497559	91497559	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21A	55605	broad.mit.edu	37	12	39751210	39751210	+	Silent	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRC3	3823	broad.mit.edu	37	12	10588364	10588364	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT12	3859	broad.mit.edu	37	17	39018900	39018900	+	Intron	DEL	A	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6C	286887	broad.mit.edu	37	12	52864796	52864796	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT81	3887	broad.mit.edu	37	12	52685241	52685241	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-2	337959	broad.mit.edu	37	21	31744439	31744439	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP3-3	85293	broad.mit.edu	37	17	39150336	39150336	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-5	439915	broad.mit.edu	37	11	1651191	1651199	+	In_Frame_Del	DEL	GGCTGTGGA	-	-	rs144216147		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112463224	112463224	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMP2	3920	broad.mit.edu	37	X	119576490	119576490	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAS1L	81887	broad.mit.edu	37	X	64737913	64737913	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	37005411	37005411	+	3'UTR	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE2C	353140	broad.mit.edu	37	1	152648564	152648564	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCK	3932	broad.mit.edu	37	1	32741606	32741606	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCP2	3937	broad.mit.edu	37	5	169680125	169680125	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCTL	197021	broad.mit.edu	37	15	66850109	66850109	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGR6	59352	broad.mit.edu	37	1	202245537	202245537	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55143905	55143905	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMOD1	25802	broad.mit.edu	37	1	201915292	201915292	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646214	646214	broad.mit.edu	37	15	21937827	21937827	+	RNA	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC651250	651250	broad.mit.edu	37	17	66145431	66145431	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	22764215	22764215	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC96610	96610	broad.mit.edu	37	22	23114827	23114827	+	RNA	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF2	164832	broad.mit.edu	37	2	100917092	100917092	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	82416126	82416126	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN3	23284	broad.mit.edu	37	4	62812576	62812576	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPXN	9404	broad.mit.edu	37	11	58295382	58295382	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170145561	170145561	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD6	130574	broad.mit.edu	37	2	150327362	150327362	+	Nonstop_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB1	4112	broad.mit.edu	37	X	30268940	30268940	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEB2	4113	broad.mit.edu	37	X	30237051	30237051	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140982941	140982941	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGED2	10916	broad.mit.edu	37	X	54841649	54841649	+	Intron	SNP	T	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGT1	84061	broad.mit.edu	37	X	77112246	77112246	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAG	4099	broad.mit.edu	37	19	35791291	35791291	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MALT1	10892	broad.mit.edu	37	18	56411568	56411568	+	Splice_Site	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MANBA	4126	broad.mit.edu	37	4	103644031	103644031	+	Frame_Shift_Del	DEL	C	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K1	5604	broad.mit.edu	37	15	66727441	66727441	+	Missense_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K5	5607	broad.mit.edu	37	15	67855587	67855587	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP3K15	389840	broad.mit.edu	37	X	19379644	19379644	+	Silent	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47346708	47346708	+	Silent	SNP	A	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEI1	150365	broad.mit.edu	37	22	42174740	42174740	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MERTK	10461	broad.mit.edu	37	2	112755053	112755053	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MKI67	4288	broad.mit.edu	37	10	129906387	129906387	+	Silent	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT4	4301	broad.mit.edu	37	6	168307845	168307845	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89058858	89058858	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89179851	89179851	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158813937	158813937	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOGAT2	80168	broad.mit.edu	37	11	75438534	75438535	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOV10L1	54456	broad.mit.edu	37	22	50572451	50572451	+	Silent	SNP	G	T	T	rs148444495		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPL	4352	broad.mit.edu	37	1	43812325	43812325	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRRF	92399	broad.mit.edu	37	9	125075707	125075707	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60184263	60184263	+	Missense_Mutation	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH6	2956	broad.mit.edu	37	2	48034055	48034055	+	3'UTR	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSLN	10232	broad.mit.edu	37	16	816697	816697	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MT4	84560	broad.mit.edu	37	16	56599112	56599112	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFSD	64779	broad.mit.edu	37	16	86582141	86582141	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR8	55613	broad.mit.edu	37	X	63574525	63574525	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTO1	25821	broad.mit.edu	37	6	74183111	74183111	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9024488	9024488	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9059194	9059194	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100676470	100676470	+	Silent	SNP	A	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10417165	10417165	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10446451	10446451	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10447283	10447283	+	Missense_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH3	4621	broad.mit.edu	37	17	10535312	10535312	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH4	4622	broad.mit.edu	37	17	10366242	10366242	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL7	58498	broad.mit.edu	37	7	44180486	44180486	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO15A	51168	broad.mit.edu	37	17	18038984	18038984	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26194047	26194047	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171056646	171056646	+	Intron	SNP	T	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOC	4653	broad.mit.edu	37	1	171607874	171607874	+	Intron	DEL	G	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NACA2	342538	broad.mit.edu	37	17	59668525	59668525	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101755488	101755488	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101757239	101757239	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAT8B	51471	broad.mit.edu	37	2	73928033	73928033	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAT8B	51471	broad.mit.edu	37	2	73928243	73928243	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78444946	78444946	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35770462	35770462	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAM2	4685	broad.mit.edu	37	21	22849786	22849786	+	Missense_Mutation	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA3	8202	broad.mit.edu	37	20	46280081	46280081	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA5	4698	broad.mit.edu	37	7	123185620	123185620	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB2	54550	broad.mit.edu	37	16	84031925	84031925	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD1	121441	broad.mit.edu	37	12	97328824	97328824	+	Missense_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK1	4750	broad.mit.edu	37	4	170384541	170384541	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	21555957	21555957	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29661829	29661845	+	Intron	DEL	ACATGCTAATAGTGTAT	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29663445	29663445	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFAM1	150372	broad.mit.edu	37	22	42805424	42805424	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC3	4775	broad.mit.edu	37	16	68224795	68224795	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFATC4	4776	broad.mit.edu	37	14	24845163	24845163	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFKBID	84807	broad.mit.edu	37	19	36380868	36380868	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPA1	123606	broad.mit.edu	37	15	23048984	23048984	+	Missense_Mutation	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKD1	85407	broad.mit.edu	37	16	50642220	50642220	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC3	197358	broad.mit.edu	37	16	3614682	3614682	+	Silent	SNP	T	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7060132	7060132	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP6	171389	broad.mit.edu	37	11	284494	284494	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1L1	29881	broad.mit.edu	37	7	44560666	44560666	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPLOC4	55666	broad.mit.edu	37	17	79571701	79571701	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR0B1	190	broad.mit.edu	37	X	30326434	30326434	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRIP2	83714	broad.mit.edu	37	12	2936882	2936882	+	Intron	DEL	C	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN1	9378	broad.mit.edu	37	2	50280813	50280813	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTN1	9423	broad.mit.edu	37	17	9086126	9086126	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88483959	88483959	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP107	57122	broad.mit.edu	37	12	69084442	69084442	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP43	348995	broad.mit.edu	37	6	150057784	150057784	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF2B	728343	broad.mit.edu	37	X	101576802	101576802	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF4	55999	broad.mit.edu	37	X	101818734	101818734	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAS2	4939	broad.mit.edu	37	12	113416336	113416336	+	Translation_Start_Site	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OAS2	4939	broad.mit.edu	37	12	113436106	113436106	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228412410	228412410	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228504379	228504379	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCA2	4948	broad.mit.edu	37	15	28196981	28196981	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCM2	4951	broad.mit.edu	37	7	97614181	97614181	+	3'UTR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCRL	4952	broad.mit.edu	37	X	128682712	128682712	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODF1	4956	broad.mit.edu	37	8	103564336	103564336	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ1	10178	broad.mit.edu	37	X	123556416	123556416	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPCML	4978	broad.mit.edu	37	11	132290114	132290114	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10C1	442194	broad.mit.edu	37	6	29408195	29408195	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10R2	343406	broad.mit.edu	37	1	158450371	158450371	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10S1	219873	broad.mit.edu	37	11	123847594	123847594	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C4	138804	broad.mit.edu	37	9	107288787	107288787	+	Frame_Shift_Del	DEL	T	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13H1	347468	broad.mit.edu	37	X	130678918	130678918	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1C1	26188	broad.mit.edu	37	1	247921653	247921653	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1I1	126370	broad.mit.edu	37	19	15198003	15198003	+	Missense_Mutation	SNP	G	T	T	rs138224343		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1N1	138883	broad.mit.edu	37	9	125288841	125288841	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B11	127623	broad.mit.edu	37	1	247614347	247614347	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2H1	26716	broad.mit.edu	37	6	29430207	29430207	+	Nonsense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T2	401992	broad.mit.edu	37	1	248616419	248616419	+	Silent	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A47	403253	broad.mit.edu	37	11	48511031	48511031	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N2	390429	broad.mit.edu	37	14	20296384	20296384	+	Silent	SNP	G	A	A	rs149732016	byFrequency	TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A1	120796	broad.mit.edu	37	11	6048493	6048493	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR56A5	390084	broad.mit.edu	37	11	5989375	5989375	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J1	219477	broad.mit.edu	37	11	56128008	56128008	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9I1	219954	broad.mit.edu	37	11	57886684	57886684	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL7	114881	broad.mit.edu	37	17	45886818	45886818	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL8	114882	broad.mit.edu	37	12	76788492	76788492	+	Silent	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY10	27334	broad.mit.edu	37	X	78216521	78216521	+	Silent	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176564173	176564173	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA	5069	broad.mit.edu	37	9	119065156	119065156	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PATE1	160065	broad.mit.edu	37	11	125618577	125618577	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91873354	91873354	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55973840	55973840	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH7	5099	broad.mit.edu	37	4	30724495	30724495	+	Missense_Mutation	SNP	A	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH8	5100	broad.mit.edu	37	13	53418802	53418802	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA2	56146	broad.mit.edu	37	5	140175015	140175015	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB12	56124	broad.mit.edu	37	5	140589646	140589646	+	Silent	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB12	56124	broad.mit.edu	37	5	140589974	140589974	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB2	56133	broad.mit.edu	37	5	140474663	140474663	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA6	56109	broad.mit.edu	37	5	140753949	140753949	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCK1	5105	broad.mit.edu	37	20	56136351	56136351	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82791757	82791757	+	Missense_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNX	22990	broad.mit.edu	37	14	71556092	71556092	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31904714	31904714	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFD	80310	broad.mit.edu	37	11	103797631	103797631	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD11	51248	broad.mit.edu	37	X	69508374	69508374	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PES1	23481	broad.mit.edu	37	22	30975989	30975989	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGAP1	80055	broad.mit.edu	37	2	197777816	197777816	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF8	23133	broad.mit.edu	37	X	54037540	54037540	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHKA2	5256	broad.mit.edu	37	X	18912309	18912309	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGK	10026	broad.mit.edu	37	1	77660920	77660920	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIGS	94005	broad.mit.edu	37	17	26890731	26890732	+	Intron	DEL	AA	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3R6	146850	broad.mit.edu	37	17	8706497	8706497	+	3'UTR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIKFYVE	200576	broad.mit.edu	37	2	209165672	209165672	+	Missense_Mutation	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNM1	9600	broad.mit.edu	37	11	67269493	67269493	+	Silent	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIWIL2	55124	broad.mit.edu	37	8	22137127	22137127	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L2	114780	broad.mit.edu	37	16	81232459	81232459	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2	5311	broad.mit.edu	37	4	88959554	88959554	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110487490	110487490	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110520355	110520355	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4C	8605	broad.mit.edu	37	19	48608688	48608688	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLAC1L	219990	broad.mit.edu	37	11	59814632	59814632	+	3'UTR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA9	51054	broad.mit.edu	37	12	45567458	45567458	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLTP	5360	broad.mit.edu	37	20	44533835	44533835	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB3	5365	broad.mit.edu	37	X	153036344	153036344	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PM20D2	135293	broad.mit.edu	37	6	89871553	89871553	+	Missense_Mutation	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMFBP1	83449	broad.mit.edu	37	16	72164249	72164249	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNCK	139728	broad.mit.edu	37	X	152937712	152937712	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLA1	5422	broad.mit.edu	37	X	24807066	24807066	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLM	27434	broad.mit.edu	37	7	44119252	44119252	+	Missense_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1B	84172	broad.mit.edu	37	2	113316941	113316941	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POM121L12	285877	broad.mit.edu	37	7	53104314	53104314	+	3'UTR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEE	445582	broad.mit.edu	37	2	131981333	131981333	+	Intron	SNP	A	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARA	5465	broad.mit.edu	37	22	46615710	46615710	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1A	10891	broad.mit.edu	37	4	23814337	23814337	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPHLN1	51535	broad.mit.edu	37	12	42681574	42681574	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIL2	23759	broad.mit.edu	37	22	22036612	22036612	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3A	5506	broad.mit.edu	37	7	113522035	113522035	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R3B	28227	broad.mit.edu	37	X	299712	299712	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM14	63978	broad.mit.edu	37	8	70981356	70981356	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PREX1	57580	broad.mit.edu	37	20	47292668	47292668	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKX	5613	broad.mit.edu	37	X	3592712	3592712	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRLR	5618	broad.mit.edu	37	5	35068324	35068324	+	Silent	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPS1L1	221823	broad.mit.edu	37	7	18067064	18067064	+	Silent	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA6	5687	broad.mit.edu	37	14	35781997	35781997	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTBP2	58155	broad.mit.edu	37	1	97278772	97278772	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS2	81490	broad.mit.edu	37	11	474009	474009	+	Intron	SNP	T	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTENP1	11191	broad.mit.edu	37	9	33676393	33676393	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGIR	5739	broad.mit.edu	37	19	47127082	47127082	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141810476	141810476	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN12	5782	broad.mit.edu	37	7	77261701	77261701	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN9	5780	broad.mit.edu	37	15	75815560	75815560	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198721616	198721616	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRG	5793	broad.mit.edu	37	3	62253061	62253062	+	Intron	INS	-	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PVRL1	5818	broad.mit.edu	37	11	119508809	119508809	+	Nonstop_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1653010	1653010	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9317929	9317929	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PZP	5858	broad.mit.edu	37	12	9360755	9360755	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QPRT	23475	broad.mit.edu	37	16	29690615	29690615	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH2	84074	broad.mit.edu	37	17	74289961	74289961	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51L3	5892	broad.mit.edu	37	17	33442288	33442288	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGDS	5900	broad.mit.edu	37	9	135976835	135976835	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL1	8437	broad.mit.edu	37	12	113552717	113552717	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL3	64926	broad.mit.edu	37	19	15562827	15562827	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM16	22828	broad.mit.edu	37	6	155113882	155113882	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM46	166863	broad.mit.edu	37	4	155720237	155720237	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RELN	5649	broad.mit.edu	37	7	103368703	103368703	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RERGL	79785	broad.mit.edu	37	12	18234173	18234173	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RET	5979	broad.mit.edu	37	10	43611989	43611989	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX3	5991	broad.mit.edu	37	9	3288091	3288091	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS1	5996	broad.mit.edu	37	1	192545461	192545461	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS1	5996	broad.mit.edu	37	1	192547461	192547461	+	Silent	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK1	83732	broad.mit.edu	37	6	7393347	7393347	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEL	6041	broad.mit.edu	37	1	182554312	182554312	+	Intron	DEL	C	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF219	79596	broad.mit.edu	37	13	79190706	79190707	+	Frame_Shift_Ins	INS	-	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77612555	77612555	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO4	54538	broad.mit.edu	37	11	124756396	124756396	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10470795	10470795	+	Silent	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1	6101	broad.mit.edu	37	8	55537445	55537445	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPAP3	79657	broad.mit.edu	37	12	48091539	48091539	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS11	6205	broad.mit.edu	37	19	49999587	49999587	+	5'Flank	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRAGB	10325	broad.mit.edu	37	X	55782220	55782220	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSBN1L	222194	broad.mit.edu	37	7	77378976	77378976	+	Silent	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33603291	33603291	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD7	344658	broad.mit.edu	37	3	169646344	169646344	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBDS	51119	broad.mit.edu	37	7	66460256	66460256	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCAPER	49855	broad.mit.edu	37	15	77087629	77087629	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCLT1	132320	broad.mit.edu	37	4	129867262	129867262	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCML2	10389	broad.mit.edu	37	X	18260586	18260587	+	Missense_Mutation	DNP	GC	TT	TT			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166898802	166898802	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	165970389	165970389	+	Silent	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA6C	10500	broad.mit.edu	37	1	151107031	151107031	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SENP6	26054	broad.mit.edu	37	6	76405596	76405596	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B3	23450	broad.mit.edu	37	16	70605714	70605715	+	Nonstop_Mutation	DNP	TG	CT	CT			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK1	50944	broad.mit.edu	37	19	51215166	51215166	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHMT2	6472	broad.mit.edu	37	12	57627914	57627914	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPB2	284759	broad.mit.edu	37	20	1456686	1456686	+	3'UTR	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKI	6497	broad.mit.edu	37	1	2234641	2234641	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A8	246213	broad.mit.edu	37	12	100796515	100796515	+	Missense_Mutation	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A18	83733	broad.mit.edu	37	22	18064052	18064052	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC34A1	6569	broad.mit.edu	37	5	176820729	176820729	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A8	146167	broad.mit.edu	37	16	84050277	84050277	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A8	146167	broad.mit.edu	37	16	84050766	84050766	+	Missense_Mutation	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC41A1	254428	broad.mit.edu	37	1	205766955	205766955	+	Intron	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75672460	75672460	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A5	6528	broad.mit.edu	37	19	17988585	17988585	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A16	28968	broad.mit.edu	37	19	49797775	49797775	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1201769	1201769	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A8	6535	broad.mit.edu	37	X	152957095	152957095	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A9	11136	broad.mit.edu	37	19	33350773	33350773	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1B3	28234	broad.mit.edu	37	12	21011412	21011412	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT2	9353	broad.mit.edu	37	4	20611881	20611881	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMAD4	4089	broad.mit.edu	37	18	48584869	48584869	+	Intron	SNP	T	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD1	150572	broad.mit.edu	37	2	88367607	88367607	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNIP1	79753	broad.mit.edu	37	1	38006344	38006344	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-19	767597	broad.mit.edu	37	14	101442271	101442271	+	5'Flank	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25470394	25470394	+	Intron	SNP	A	T	T	rs56825076	by1000genomes	TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-1	100033413	broad.mit.edu	37	15	25296703	25296703	+	RNA	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96943765	96943765	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRPN	6638	broad.mit.edu	37	15	25154911	25154911	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNTG1	54212	broad.mit.edu	37	8	51621516	51621516	+	Missense_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOS1	6654	broad.mit.edu	37	2	39233756	39233756	+	Intron	SNP	A	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX17	64321	broad.mit.edu	37	8	55370910	55370910	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP110	3431	broad.mit.edu	37	2	231072860	231072860	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231175801	231175801	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXN3	139067	broad.mit.edu	37	X	142596980	142596980	+	Silent	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHKAP	80309	broad.mit.edu	37	2	228856146	228856146	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIN3	169981	broad.mit.edu	37	X	57021331	57021331	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158609274	158609274	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTB	6710	broad.mit.edu	37	14	65271709	65271709	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRD5A3	79644	broad.mit.edu	37	4	56212671	56212671	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSR2	6746	broad.mit.edu	37	1	155984896	155984896	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX5	6758	broad.mit.edu	37	X	48053755	48053755	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX6	280657	broad.mit.edu	37	X	47976475	47976475	+	Missense_Mutation	SNP	A	C	C	rs17327911		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG3L4	64940	broad.mit.edu	37	7	66772771	66772771	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33685899	33685899	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD8	9754	broad.mit.edu	37	X	67937113	67937113	+	Frame_Shift_Del	DEL	G	-	-			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT3	6774	broad.mit.edu	37	17	40491443	40491443	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STC1	6781	broad.mit.edu	37	8	23711941	23711941	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK33	65975	broad.mit.edu	37	11	8496463	8496463	+	5'UTR	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STON1-GTF2A1L	286749	broad.mit.edu	37	2	48873798	48873798	+	Missense_Mutation	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT2	127833	broad.mit.edu	37	1	202571690	202571690	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT6	148281	broad.mit.edu	37	1	114680347	114680347	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL4	94121	broad.mit.edu	37	X	99945018	99945018	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TACR2	6865	broad.mit.edu	37	10	71174562	71174562	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF4	6874	broad.mit.edu	37	20	60584201	60584201	+	Silent	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARS2	80222	broad.mit.edu	37	1	150463063	150463063	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D1	23216	broad.mit.edu	37	4	38051223	38051223	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	52943025	52943025	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD1	56165	broad.mit.edu	37	10	115971637	115971637	+	Nonsense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TESC	54997	broad.mit.edu	37	12	117486714	117486714	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX15	56154	broad.mit.edu	37	8	30705647	30705647	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50683135	50683135	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50696702	50696702	+	Silent	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM2	7052	broad.mit.edu	37	20	36779322	36779322	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134031948	134031948	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THEG	51298	broad.mit.edu	37	19	362114	362114	+	3'UTR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THOC2	57187	broad.mit.edu	37	X	122766629	122766629	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD1	55901	broad.mit.edu	37	13	52972377	52972377	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TH	7054	broad.mit.edu	37	11	2189502	2189502	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32559446	32559446	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM2	26230	broad.mit.edu	37	6	155458398	155458398	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM2	26230	broad.mit.edu	37	6	155500380	155500380	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98192670	98192671	+	Missense_Mutation	DNP	GG	AT	AT			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR4	7099	broad.mit.edu	37	9	120476448	120476448	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM7SF4	81501	broad.mit.edu	37	8	105360984	105360984	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TM9SF4	9777	broad.mit.edu	37	20	30738538	30738538	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMED8	283578	broad.mit.edu	37	14	77808395	77808395	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM132B	114795	broad.mit.edu	37	12	126068336	126068336	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM181	57583	broad.mit.edu	37	6	159004970	159004971	+	Intron	INS	-	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM209	84928	broad.mit.edu	37	7	129842495	129842495	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM40	55287	broad.mit.edu	37	3	12779932	12779932	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM67	91147	broad.mit.edu	37	8	94808196	94808196	+	Missense_Mutation	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68956382	68956382	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC4	84899	broad.mit.edu	37	13	101320951	101320951	+	Missense_Mutation	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMX4	56255	broad.mit.edu	37	20	7963092	7963092	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNI3K	51086	broad.mit.edu	37	1	74716532	74716532	+	Intron	SNP	C	A	A	rs66515031		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNR	7143	broad.mit.edu	37	1	175365799	175365799	+	Missense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7579481	7579482	+	Frame_Shift_Ins	INS	-	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPD52L2	7165	broad.mit.edu	37	20	62519027	62519027	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10934905	10934906	+	Intron	INS	-	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10944750	10944750	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF7	84231	broad.mit.edu	37	16	2225041	2225041	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRDN	10345	broad.mit.edu	37	6	123698790	123698790	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIB3	57761	broad.mit.edu	37	20	368840	368840	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM43	129868	broad.mit.edu	37	2	96260875	96260875	+	Silent	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM8	81603	broad.mit.edu	37	10	104404673	104404673	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIO	7204	broad.mit.edu	37	5	14507306	14507306	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT2B	79979	broad.mit.edu	37	X	100296271	100296271	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72981518	72981518	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38320279	38320279	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45825775	45825775	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPS1	7227	broad.mit.edu	37	8	116632271	116632271	+	Silent	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC1	7248	broad.mit.edu	37	9	135797349	135797349	+	Nonsense_Mutation	SNP	C	A	A	rs118203392		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSC22D3	1831	broad.mit.edu	37	X	107018416	107018416	+	Silent	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSSC1	7260	broad.mit.edu	37	2	3200660	3200660	+	Silent	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC18	118491	broad.mit.edu	37	10	75029452	75029452	+	Nonsense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC21A	199223	broad.mit.edu	37	3	39174562	39174562	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179458826	179458826	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179466637	179466637	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179614227	179614227	+	Silent	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TULP3	7289	broad.mit.edu	37	12	3040343	3040343	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
U2AF2	11338	broad.mit.edu	37	19	56172460	56172460	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4B	10277	broad.mit.edu	37	1	10114699	10114699	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR1	197131	broad.mit.edu	37	15	43314845	43314845	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234675671	234675671	+	Intron	SNP	T	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A8	54576	broad.mit.edu	37	2	234557405	234557405	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54342531	54342531	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	215847408	215847408	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216369927	216369927	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP29	57663	broad.mit.edu	37	19	57642636	57642636	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP43	124739	broad.mit.edu	37	17	9578299	9578299	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6NL	9712	broad.mit.edu	37	10	11505455	11505455	+	Nonsense_Mutation	SNP	G	T	T	rs35440878		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	107445471	107445471	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	23426193	23426193	+	IGR	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	42672452	42672452	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	82537150	82537150	+	IGR	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	110697245	110697245	+	IGR	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48453838	48453838	+	IGR	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49860072	49860072	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51451396	51451396	+	IGR	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55059935	55059935	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55070272	55070272	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55579941	55579942	+	IGR	DNP	GG	TT	TT			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89466240	89466241	+	IGR	DNP	CC	AA	AA			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	127828905	127828905	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	129499487	129499487	+	IGR	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	17145008	17145008	+	IGR	SNP	C	G	G	rs140594045	by1000genomes	TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34318608	34318608	+	IGR	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	55517873	55517873	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	9181564	9181564	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	57889066	57889066	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68405953	68405953	+	IGR	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19411670	19411670	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20181563	20181563	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	35898991	35898991	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45330193	45330193	+	IGR	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22546754	22546754	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	23500597	23500597	+	IGR	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	18027030	18027030	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	31985075	31985075	+	IGR	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32626917	32626917	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33401918	33401918	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33941745	33941745	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20652809	20652809	+	IGR	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57864168	57864168	+	IGR	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	57864311	57864311	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	52929407	52929407	+	IGR	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	203369685	203369685	+	IGR	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	18200756	18200756	+	IGR	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10899122	10899122	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14861508	14861508	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	15313215	15313215	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	103028151	103028151	+	IGR	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131026425	131026425	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132349368	132349368	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132354629	132354629	+	IGR	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	162363278	162363278	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	208977087	208977087	+	IGR	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34065273	34065273	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	50105777	50105777	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	71282491	71282491	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	151899949	151899949	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	40364390	40364390	+	IGR	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	46542440	46542440	+	IGR	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	53098378	53098378	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	68683173	68683173	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87100866	87100866	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	88998733	88998733	+	IGR	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96069304	96069304	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189270808	189270808	+	IGR	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	110285552	110285552	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	116052178	116052178	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23303787	23303787	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	28927433	28927433	+	IGR	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	7290962	7290962	+	IGR	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	112682622	112682622	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27492062	27492062	+	IGR	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	124121185	124121185	+	IGR	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	136398972	136398972	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	136399605	136399605	+	IGR	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	159025969	159025969	+	IGR	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56665445	56665445	+	IGR	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57215695	57215695	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	124301940	124301940	+	IGR	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88801638	88801638	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	138558013	138558013	+	IGR	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	27610024	27610024	+	IGR	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	36003064	36003064	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	65602650	65602650	+	IGR	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78017442	78017442	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	106841315	106841315	+	IGR	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134812454	134812454	+	IGR	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	142795027	142795027	+	IGR	SNP	A	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26179010	26179010	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	45492597	45492597	+	IGR	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	47663560	47663560	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	53852774	53852774	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	55662717	55662717	+	IGR	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	65014425	65014425	+	IGR	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	75555652	75555652	+	IGR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VN1R5	317705	broad.mit.edu	37	1	247419801	247419801	+	Missense_Mutation	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA3B	200403	broad.mit.edu	37	2	98887214	98887214	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6153411	6153411	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6182795	6182795	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS	7453	broad.mit.edu	37	14	100803403	100803403	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	70885786	70885786	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71142242	71142242	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR27	155368	broad.mit.edu	37	7	73256416	73256416	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR44	54521	broad.mit.edu	37	X	117526694	117526694	+	Missense_Mutation	SNP	A	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR49	151790	broad.mit.edu	37	3	167246862	167246862	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF1	7456	broad.mit.edu	37	2	175436881	175436881	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP2	7512	broad.mit.edu	37	X	128890490	128890490	+	Silent	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YPEL2	388403	broad.mit.edu	37	17	57430918	57430919	+	Intron	INS	-	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDC2	64848	broad.mit.edu	37	5	112927872	112927872	+	Silent	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB20	26137	broad.mit.edu	37	3	114649692	114649692	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB38	253461	broad.mit.edu	37	3	141163939	141163939	+	Silent	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB44	29068	broad.mit.edu	37	11	130165776	130165776	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H4	23211	broad.mit.edu	37	19	47588270	47588270	+	Intron	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111698402	111698402	+	Missense_Mutation	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC5	203430	broad.mit.edu	37	X	77912628	77912628	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCWPW2	152098	broad.mit.edu	37	3	28555552	28555552	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP30	22835	broad.mit.edu	37	19	38126043	38126043	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFR	51663	broad.mit.edu	37	5	32380377	32380377	+	Intron	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZGPAT	84619	broad.mit.edu	37	20	62340383	62340383	+	Missense_Mutation	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT4	79698	broad.mit.edu	37	8	40438627	40438627	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF124	7678	broad.mit.edu	37	1	247319988	247319988	+	Silent	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF19	7567	broad.mit.edu	37	16	71509360	71509360	+	Missense_Mutation	SNP	T	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF229	7772	broad.mit.edu	37	19	44946980	44946980	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF238	10472	broad.mit.edu	37	1	244218618	244218618	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF331	55422	broad.mit.edu	37	19	54074835	54074835	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF414	84330	broad.mit.edu	37	19	8577564	8577564	+	Nonsense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49660112	49660112	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49670744	49670744	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF423	23090	broad.mit.edu	37	16	49856553	49856553	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF44	51710	broad.mit.edu	37	19	12384274	12384274	+	Missense_Mutation	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF483	158399	broad.mit.edu	37	9	114296717	114296717	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22804890	22804890	+	Nonsense_Mutation	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF521	25925	broad.mit.edu	37	18	22806795	22806795	+	Missense_Mutation	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF526	116115	broad.mit.edu	37	19	42728897	42728897	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31040344	31040344	+	Missense_Mutation	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31040550	31040550	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF563	147837	broad.mit.edu	37	19	12432157	12432157	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF578	147660	broad.mit.edu	37	19	53007907	53007907	+	Splice_Site	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF645	158506	broad.mit.edu	37	X	22292161	22292161	+	Silent	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF649	65251	broad.mit.edu	37	19	52403490	52403490	+	5'UTR	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22362965	22362965	+	Silent	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF688	146542	broad.mit.edu	37	16	30581633	30581633	+	Silent	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF704	619279	broad.mit.edu	37	8	81571928	81571928	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57768085	57768085	+	Missense_Mutation	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57829482	57829482	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF91	7644	broad.mit.edu	37	19	23545221	23545221	+	Missense_Mutation	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF98	148198	broad.mit.edu	37	19	22575568	22575568	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN1	284312	broad.mit.edu	37	19	58565342	58565342	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5B	342933	broad.mit.edu	37	19	56701551	56701551	+	Missense_Mutation	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5B	342933	broad.mit.edu	37	19	56701905	56701905	+	Missense_Mutation	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187704009	187704009	+	Intron	SNP	G	C	C			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22265804	22265804	+	Intron	SNP	C	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	28734323	28734323	+	3'UTR	SNP	A	G	G			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	23108827	23108827	+	RNA	SNP	C	T	T	rs2570838		TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20744693	20744693	+	RNA	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14184153	14184153	+	3'UTR	SNP	G	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	173331741	173331741	+	Intron	SNP	T	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133075536	133075536	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186673585	186673585	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89495513	89495513	+	Intron	SNP	A	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89619903	89619903	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	42982864	42982865	+	Intron	DNP	GG	TT	TT			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	18364992	18364992	+	5'Flank	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142124193	142124193	+	Intron	SNP	C	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142206723	142206723	+	Intron	SNP	C	A	A			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	136067197	136067197	+	Intron	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
psiTPTE22	387590	broad.mit.edu	37	22	17178521	17178521	+	RNA	SNP	G	T	T			TCGA-75-6211-01A-11D-1753-08	TCGA-75-6211-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
