Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
A1BG	1	broad.mit.edu	37	19	58862708	58862708	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A1BG	1	broad.mit.edu	37	19	58862708	58862708	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A1BG	1	broad.mit.edu	37	19	58862708	58862708	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A1CF	29974	broad.mit.edu	37	10	52580401	52580401	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A1CF	29974	broad.mit.edu	37	10	52580401	52580401	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A1CF	29974	broad.mit.edu	37	10	52580401	52580401	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7760604	7760604	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7760604	7760604	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
A2BP1	54715	broad.mit.edu	37	16	7760604	7760604	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL2	344752	broad.mit.edu	37	3	151474962	151474962	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL2	344752	broad.mit.edu	37	3	151474962	151474962	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL2	344752	broad.mit.edu	37	3	151474962	151474962	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADAT	51166	broad.mit.edu	37	4	170987529	170987529	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADAT	51166	broad.mit.edu	37	4	170987529	170987529	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADAT	51166	broad.mit.edu	37	4	170987529	170987529	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAMP	14	broad.mit.edu	37	2	219132393	219132393	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAMP	14	broad.mit.edu	37	2	219132393	219132393	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAMP	14	broad.mit.edu	37	2	219132393	219132393	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AATF	26574	broad.mit.edu	37	17	35311178	35311178	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67151277	67151277	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67151277	67151277	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA10	10349	broad.mit.edu	37	17	67151277	67151277	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48316262	48316262	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48452087	48452087	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48619720	48619720	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48452087	48452087	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA13	154664	broad.mit.edu	37	7	48452087	48452087	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA2	20	broad.mit.edu	37	9	139905197	139905198	+	Intron	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA2	20	broad.mit.edu	37	9	139905197	139905198	+	Intron	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94474443	94474443	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94544772	94544772	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94574149	94574149	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94474443	94474443	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94544772	94544772	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94574149	94574149	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94474443	94474443	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94544772	94544772	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA4	24	broad.mit.edu	37	1	94574149	94574149	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA6	23460	broad.mit.edu	37	17	67090735	67090735	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66920778	66920778	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66920778	66920778	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA8	10351	broad.mit.edu	37	17	66920778	66920778	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67028513	67028513	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67039769	67039769	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67028513	67028513	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67039769	67039769	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67028513	67028513	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA9	10350	broad.mit.edu	37	17	67039769	67039769	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87174432	87174432	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB4	5244	broad.mit.edu	37	7	87081269	87081269	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC10	89845	broad.mit.edu	37	6	43404065	43404065	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC10	89845	broad.mit.edu	37	6	43404065	43404065	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC10	89845	broad.mit.edu	37	6	43404065	43404065	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48141345	48141345	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48141345	48141345	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17470036	17470036	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17470036	17470036	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC8	6833	broad.mit.edu	37	11	17470036	17470036	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22089557	22089557	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22089557	22089557	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC9	10060	broad.mit.edu	37	12	22089557	22089557	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119028819	119028819	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119028819	119028819	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCG4	64137	broad.mit.edu	37	11	119028819	119028819	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABI3BP	25890	broad.mit.edu	37	3	100498949	100498949	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109577158	109577158	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109577158	109577158	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACB	32	broad.mit.edu	37	12	109577158	109577158	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD11	84129	broad.mit.edu	37	3	132361036	132361036	+	Intron	SNP	T	C	C	rs138309691	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD11	84129	broad.mit.edu	37	3	132361036	132361036	+	Intron	SNP	T	C	C	rs138309691	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD11	84129	broad.mit.edu	37	3	132361036	132361036	+	Intron	SNP	T	C	C	rs138309691	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD9	28976	broad.mit.edu	37	3	128598411	128598411	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD9	28976	broad.mit.edu	37	3	128598411	128598411	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	32366497	32366497	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	32366497	32366497	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCN1	40	broad.mit.edu	37	17	32366497	32366497	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACER1	125981	broad.mit.edu	37	19	6309912	6309912	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT11	26027	broad.mit.edu	37	1	55059537	55059537	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT11	26027	broad.mit.edu	37	1	55059537	55059537	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT12	134526	broad.mit.edu	37	5	80655619	80655619	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT12	134526	broad.mit.edu	37	5	80655619	80655619	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT1	641371	broad.mit.edu	37	14	74004537	74004537	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACRBP	84519	broad.mit.edu	37	12	6756063	6756063	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL1	2180	broad.mit.edu	37	4	185697670	185697670	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL1	2180	broad.mit.edu	37	4	185697670	185697670	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL1	2180	broad.mit.edu	37	4	185697670	185697670	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTA1	58	broad.mit.edu	37	1	229568983	229568983	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTA1	58	broad.mit.edu	37	1	229568983	229568983	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTA1	58	broad.mit.edu	37	1	229568983	229568983	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTG1	71	broad.mit.edu	37	17	79479156	79479156	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTG1	71	broad.mit.edu	37	17	79479156	79479156	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACTG1	71	broad.mit.edu	37	17	79479156	79479156	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR2A	92	broad.mit.edu	37	2	148683685	148683686	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR2A	92	broad.mit.edu	37	2	148683685	148683686	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127708131	127708131	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127753557	127753557	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127708131	127708131	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127753557	127753557	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127708131	127708131	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM12	8038	broad.mit.edu	37	10	127753557	127753557	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156934216	156934216	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156934216	156934216	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156934216	156934216	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM20	8748	broad.mit.edu	37	14	70991190	70991190	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM20	8748	broad.mit.edu	37	14	70991190	70991190	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM20	8748	broad.mit.edu	37	14	70991190	70991190	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM21P1	145241	broad.mit.edu	37	14	70714185	70714185	+	Translation_Start_Site	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM28	10863	broad.mit.edu	37	8	24187793	24187793	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM28	10863	broad.mit.edu	37	8	24187793	24187793	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106208131	106208131	+	RNA	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106781035	106781035	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106899200	106899200	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106962884	106962884	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106974464	106974464	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107062078	107062078	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107121953	107121953	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106208131	106208131	+	RNA	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106781035	106781035	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106899200	106899200	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106962884	106962884	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106974464	106974464	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107062078	107062078	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107121953	107121953	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106208131	106208131	+	RNA	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106653317	106653317	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106781035	106781035	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106815927	106815927	+	RNA	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106899200	106899200	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106962884	106962884	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106974464	106974464	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	107062078	107062078	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33631090	33631090	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33649115	33649115	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33631090	33631090	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33649115	33649115	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33631016	33631016	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33631090	33631090	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS12	81792	broad.mit.edu	37	5	33649115	33649115	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72509869	72509869	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS14	140766	broad.mit.edu	37	10	72509869	72509869	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS15	170689	broad.mit.edu	37	11	130340820	130340820	+	Missense_Mutation	SNP	G	A	A	rs147190472		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5319167	5319167	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5319167	5319167	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS16	170690	broad.mit.edu	37	5	5319167	5319167	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77353734	77353734	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77359658	77359658	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77353734	77353734	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77359658	77359658	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77353734	77353734	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77359658	77359658	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64769560	64769560	+	5'UTR	SNP	T	C	C	rs7446121		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64769560	64769560	+	5'UTR	SNP	T	C	C	rs7446121		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS6	11174	broad.mit.edu	37	5	64520746	64520746	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64524827	64524827	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64641633	64641633	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64524827	64524827	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64641633	64641633	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64524827	64524827	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS9	56999	broad.mit.edu	37	3	64598961	64598961	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84611264	84611264	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84611264	84611264	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTSL3	57188	broad.mit.edu	37	15	84611264	84611264	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADARB1	104	broad.mit.edu	37	21	46640630	46640630	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7521028	7521028	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7767039	7767039	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7521028	7521028	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7767039	7767039	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7521028	7521028	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY2	108	broad.mit.edu	37	5	7767039	7767039	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123038503	123038503	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123046503	123046503	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123038503	123038503	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123046503	123046503	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123038503	123038503	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY5	111	broad.mit.edu	37	3	123046503	123046503	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY6	112	broad.mit.edu	37	12	49170251	49170251	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY6	112	broad.mit.edu	37	12	49170409	49170409	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY6	112	broad.mit.edu	37	12	49170251	49170251	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY6	112	broad.mit.edu	37	12	49170409	49170409	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY6	112	broad.mit.edu	37	12	49170251	49170251	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131797656	131797656	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131797656	131797656	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADCY8	114	broad.mit.edu	37	8	131797656	131797656	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADD1	118	broad.mit.edu	37	4	2895842	2895842	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOR2	79602	broad.mit.edu	37	12	1866487	1866487	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOR2	79602	broad.mit.edu	37	12	1866487	1866487	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADIPOR2	79602	broad.mit.edu	37	12	1866487	1866487	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADPRHL1	113622	broad.mit.edu	37	13	114107681	114107681	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADPRHL1	113622	broad.mit.edu	37	13	114107681	114107681	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADPRHL1	113622	broad.mit.edu	37	13	114107681	114107681	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRA2C	152	broad.mit.edu	37	4	3769830	3769830	+	3'UTR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRBK1	156	broad.mit.edu	37	11	67049774	67049774	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADRBK1	156	broad.mit.edu	37	11	67049774	67049774	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFAP1L1	134265	broad.mit.edu	37	5	148686895	148686895	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF1	4299	broad.mit.edu	37	4	88035722	88035722	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147743879	147743879	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147967382	147967382	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147743879	147743879	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147967382	147967382	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147743879	147743879	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF2	2334	broad.mit.edu	37	X	147967382	147967382	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF4	27125	broad.mit.edu	37	5	132270357	132270357	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF4	27125	broad.mit.edu	37	5	132270357	132270357	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AFF4	27125	broad.mit.edu	37	5	132270357	132270357	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86838537	86838537	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86838537	86838537	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL1	123624	broad.mit.edu	37	15	86838537	86838537	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGBL4	84871	broad.mit.edu	37	1	50311970	50311970	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100336081	100336081	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100336081	100336081	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100336081	100336081	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPS	8540	broad.mit.edu	37	2	178388448	178388448	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPS	8540	broad.mit.edu	37	2	178388448	178388448	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPS	8540	broad.mit.edu	37	2	178388448	178388448	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L1	64850	broad.mit.edu	37	4	109670480	109670480	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L1	64850	broad.mit.edu	37	4	109670480	109670480	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2L1	64850	broad.mit.edu	37	4	109670480	109670480	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGXT2	64902	broad.mit.edu	37	5	34998886	34998886	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105405431	105405431	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105405564	105405564	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105407714	105407714	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105416636	105416636	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105418949	105418949	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105421815	105421815	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105405431	105405431	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105405564	105405564	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105407714	105407714	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105416636	105416636	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105418949	105418949	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105421815	105421815	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105407714	105407714	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHNAK2	113146	broad.mit.edu	37	14	105421815	105421815	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHSA1	10598	broad.mit.edu	37	14	77929269	77929269	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHSA1	10598	broad.mit.edu	37	14	77929269	77929269	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK1	203	broad.mit.edu	37	9	130634058	130634058	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK1	203	broad.mit.edu	37	9	130634058	130634058	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77949064	77949064	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77949064	77949064	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AK5	26289	broad.mit.edu	37	1	77949064	77949064	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A2	8854	broad.mit.edu	37	15	58302788	58302788	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A2	8854	broad.mit.edu	37	15	58302788	58302788	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1A2	8854	broad.mit.edu	37	15	58302788	58302788	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125850370	125850370	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125872401	125872401	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125872469	125872469	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125850370	125850370	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125872401	125872401	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125872469	125872469	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125877630	125877630	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125850370	125850370	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH1L1	10840	broad.mit.edu	37	3	125872401	125872401	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29551271	29551271	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29551271	29551271	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALK	238	broad.mit.edu	37	2	29551271	29551271	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1P	200420	broad.mit.edu	37	2	73899571	73899571	+	5'UTR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1P	200420	broad.mit.edu	37	2	73899571	73899571	+	5'UTR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALMS1P	200420	broad.mit.edu	37	2	73899571	73899571	+	5'UTR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45907644	45907644	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45907644	45907644	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45907644	45907644	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56203934	56203934	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56247124	56247124	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56203934	56203934	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56247124	56247124	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56203934	56203934	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPK2	115701	broad.mit.edu	37	18	56247124	56247124	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD2	271	broad.mit.edu	37	1	110168960	110168960	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPD2	271	broad.mit.edu	37	1	110168960	110168960	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38516622	38516622	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38516622	38516622	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AMPH	273	broad.mit.edu	37	7	38516622	38516622	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14798452	14798452	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14798452	14798452	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKH	56172	broad.mit.edu	37	5	14798452	14798452	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95495066	95495066	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95495066	95495066	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD20B	729171	broad.mit.edu	37	2	95495066	95495066	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO1	55107	broad.mit.edu	37	11	70002984	70002984	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO1	55107	broad.mit.edu	37	11	70002984	70002984	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101430707	101430707	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO4	121601	broad.mit.edu	37	12	101430707	101430707	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45810526	45810526	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45810526	45810526	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO6	196527	broad.mit.edu	37	12	45810526	45810526	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANP32C	23520	broad.mit.edu	37	4	165118379	165118379	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANP32C	23520	broad.mit.edu	37	4	165118379	165118379	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANP32C	23520	broad.mit.edu	37	4	165118379	165118379	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANUBL1	93550	broad.mit.edu	37	10	46112114	46112114	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA10	11199	broad.mit.edu	37	4	169105621	169105621	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA10	11199	broad.mit.edu	37	4	169105621	169105621	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA10	11199	broad.mit.edu	37	4	169105621	169105621	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA13	312	broad.mit.edu	37	8	124706029	124706029	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA13	312	broad.mit.edu	37	8	124706029	124706029	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA13	312	broad.mit.edu	37	8	124706029	124706029	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA9	8416	broad.mit.edu	37	1	150955499	150955499	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA9	8416	broad.mit.edu	37	1	150955499	150955499	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANXA9	8416	broad.mit.edu	37	1	150955499	150955499	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOAH	313	broad.mit.edu	37	7	36553071	36553071	+	Intron	SNP	G	C	C	rs118070659	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOAH	313	broad.mit.edu	37	7	36553071	36553071	+	Intron	SNP	G	C	C	rs118070659	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AOAH	313	broad.mit.edu	37	7	36553071	36553071	+	Intron	SNP	G	C	C	rs118070659	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1G1	164	broad.mit.edu	37	16	71792426	71792426	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1G1	164	broad.mit.edu	37	16	71792426	71792426	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP1G1	164	broad.mit.edu	37	16	71792426	71792426	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2A2	161	broad.mit.edu	37	11	1009345	1009345	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AP2A2	161	broad.mit.edu	37	11	1009345	1009345	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBA1	320	broad.mit.edu	37	9	72047361	72047361	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBA1	320	broad.mit.edu	37	9	72047361	72047361	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBA1	320	broad.mit.edu	37	9	72047361	72047361	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB1IP	54518	broad.mit.edu	37	10	26849900	26849901	+	Intron	DNP	TC	AT	AT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB1	322	broad.mit.edu	37	11	6423312	6423312	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APBB1	322	broad.mit.edu	37	11	6423312	6423312	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLP1	333	broad.mit.edu	37	19	36369656	36369656	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APLP1	333	broad.mit.edu	37	19	36369656	36369656	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB48R	55911	broad.mit.edu	37	16	28509228	28509228	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB48R	55911	broad.mit.edu	37	16	28509228	28509228	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB48R	55911	broad.mit.edu	37	16	28509228	28509228	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC4	403314	broad.mit.edu	37	1	183617876	183617876	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC4	403314	broad.mit.edu	37	1	183617876	183617876	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC4	403314	broad.mit.edu	37	1	183617876	183617876	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21227120	21227120	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21239499	21239499	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21245902	21245902	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21227120	21227120	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21239499	21239499	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21245902	21245902	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21227120	21227120	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21239499	21239499	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOB	338	broad.mit.edu	37	2	21245902	21245902	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APTX	54840	broad.mit.edu	37	9	33019875	33019875	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP2	359	broad.mit.edu	37	12	50344589	50344589	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP2	359	broad.mit.edu	37	12	50344589	50344589	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AQP2	359	broad.mit.edu	37	12	50344589	50344589	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFIP1	27236	broad.mit.edu	37	4	153802270	153802270	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFIP1	27236	broad.mit.edu	37	4	153802270	153802270	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFIP1	27236	broad.mit.edu	37	4	153750762	153750762	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFIP1	27236	broad.mit.edu	37	4	153802270	153802270	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69049651	69049651	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69049651	69049651	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP25	9938	broad.mit.edu	37	2	69049651	69049651	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP33	115703	broad.mit.edu	37	19	36276183	36276183	+	Missense_Mutation	SNP	G	A	A	rs139022184		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP33	115703	broad.mit.edu	37	19	36276183	36276183	+	Missense_Mutation	SNP	G	A	A	rs139022184		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP33	115703	broad.mit.edu	37	19	36276183	36276183	+	Missense_Mutation	SNP	G	A	A	rs139022184		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11187673	11187673	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11187673	11187673	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP6	395	broad.mit.edu	37	X	11187673	11187673	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10	9639	broad.mit.edu	37	8	1893703	1893703	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF10	9639	broad.mit.edu	37	8	1893703	1893703	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156909829	156909829	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156909829	156909829	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF11	9826	broad.mit.edu	37	1	156933272	156933272	+	Intron	DEL	A	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGEF16	27237	broad.mit.edu	37	1	3396278	3396279	+	Intron	INS	-	GCCCCG	GCCCCG			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1A	8289	broad.mit.edu	37	1	27059288	27059288	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1A	8289	broad.mit.edu	37	1	27059288	27059288	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARID1A	8289	broad.mit.edu	37	1	27059288	27059288	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARL1	400	broad.mit.edu	37	12	101801657	101801657	+	5'Flank	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC5	79798	broad.mit.edu	37	16	31471201	31471201	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC5	79798	broad.mit.edu	37	16	31473953	31473953	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC5	79798	broad.mit.edu	37	16	31471201	31471201	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC5	79798	broad.mit.edu	37	16	31473953	31473953	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC5	79798	broad.mit.edu	37	16	31471201	31471201	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC8	25852	broad.mit.edu	37	3	138014742	138014742	+	3'UTR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC8	25852	broad.mit.edu	37	3	138014742	138014742	+	3'UTR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARMC8	25852	broad.mit.edu	37	3	138014742	138014742	+	3'UTR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRDC4	91947	broad.mit.edu	37	15	98514435	98514435	+	3'UTR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRDC4	91947	broad.mit.edu	37	15	98514435	98514435	+	3'UTR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARRDC4	91947	broad.mit.edu	37	15	98514435	98514435	+	3'UTR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSF	416	broad.mit.edu	37	X	3002623	3002623	+	Missense_Mutation	SNP	G	C	C	rs148764513		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSF	416	broad.mit.edu	37	X	3002623	3002623	+	Missense_Mutation	SNP	G	C	C	rs148764513		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSF	416	broad.mit.edu	37	X	3002623	3002623	+	Missense_Mutation	SNP	G	C	C	rs148764513		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARSH	347527	broad.mit.edu	37	X	2932929	2932929	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAH1	427	broad.mit.edu	37	8	17916793	17916793	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAH1	427	broad.mit.edu	37	8	17916793	17916793	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAH1	427	broad.mit.edu	37	8	17916793	17916793	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAM	79827	broad.mit.edu	37	11	122968762	122968762	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAM	79827	broad.mit.edu	37	11	123065571	123065571	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAM	79827	broad.mit.edu	37	11	122968762	122968762	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAM	79827	broad.mit.edu	37	11	123065571	123065571	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAM	79827	broad.mit.edu	37	11	122968762	122968762	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAM	79827	broad.mit.edu	37	11	123065571	123065571	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131193186	131193186	+	Intron	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB10	136371	broad.mit.edu	37	7	150878458	150878458	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB10	136371	broad.mit.edu	37	7	150878458	150878458	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB15	142685	broad.mit.edu	37	7	123257663	123257664	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB15	142685	broad.mit.edu	37	7	123257663	123257664	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB15	142685	broad.mit.edu	37	7	123257663	123257664	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB5	140458	broad.mit.edu	37	4	177136684	177136684	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB5	140458	broad.mit.edu	37	4	177136684	177136684	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASGR1	432	broad.mit.edu	37	17	7081808	7081808	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASGR1	432	broad.mit.edu	37	17	7081808	7081808	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASGR1	432	broad.mit.edu	37	17	7081808	7081808	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASL	435	broad.mit.edu	37	7	65552706	65552707	+	Intron	INS	-	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197060988	197060988	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197070066	197070066	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197102471	197102471	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197060988	197060988	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197070066	197070066	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197102471	197102471	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197060988	197060988	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197070066	197070066	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197102471	197102471	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTL	431705	broad.mit.edu	37	2	96801117	96801117	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTL	431705	broad.mit.edu	37	2	96801117	96801117	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTL	431705	broad.mit.edu	37	2	96801117	96801117	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31323228	31323228	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASXL3	80816	broad.mit.edu	37	18	31323228	31323228	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATG9B	285973	broad.mit.edu	37	7	150720747	150720747	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A2	23400	broad.mit.edu	37	1	17313590	17313590	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP13A2	23400	broad.mit.edu	37	1	17313590	17313590	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A3	478	broad.mit.edu	37	19	42471882	42471882	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A3	478	broad.mit.edu	37	19	42471882	42471882	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1A3	478	broad.mit.edu	37	19	42471882	42471882	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B4	23439	broad.mit.edu	37	X	119512560	119512560	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B4	23439	broad.mit.edu	37	X	119512560	119512560	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP1B4	23439	broad.mit.edu	37	X	119512560	119512560	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A1	487	broad.mit.edu	37	16	28898990	28898990	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A1	487	broad.mit.edu	37	16	28898990	28898990	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2A1	487	broad.mit.edu	37	16	28898990	28898990	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152814180	152814180	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152814180	152814180	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP2B3	492	broad.mit.edu	37	X	152814180	152814180	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP4A	495	broad.mit.edu	37	19	36044671	36044671	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP4A	495	broad.mit.edu	37	19	36044671	36044671	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP4A	495	broad.mit.edu	37	19	36044671	36044671	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN1	6310	broad.mit.edu	37	6	16328052	16328052	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN1	6310	broad.mit.edu	37	6	16328052	16328052	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN1	6310	broad.mit.edu	37	6	16328052	16328052	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN2	6311	broad.mit.edu	37	12	111957944	111957944	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN2	6311	broad.mit.edu	37	12	111957944	111957944	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXIN2	8313	broad.mit.edu	37	17	63553908	63553908	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXIN2	8313	broad.mit.edu	37	17	63553908	63553908	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AXIN2	8313	broad.mit.edu	37	17	63553908	63553908	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZI1	22994	broad.mit.edu	37	17	79169609	79169609	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AZI1	22994	broad.mit.edu	37	17	79169609	79169609	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GNT7	93010	broad.mit.edu	37	2	232262811	232262811	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B3GNT7	93010	broad.mit.edu	37	2	232262811	232262811	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11049486	11049486	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI1	575	broad.mit.edu	37	8	143603577	143603577	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP2L2	80115	broad.mit.edu	37	22	38493913	38493913	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAIAP2L2	80115	broad.mit.edu	37	22	38493913	38493913	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT2L2	23215	broad.mit.edu	37	1	171482234	171482234	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAT3	7917	broad.mit.edu	37	6	31614237	31614237	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAZ2B	29994	broad.mit.edu	37	2	160182034	160182034	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS4	585	broad.mit.edu	37	15	73009200	73009200	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS4	585	broad.mit.edu	37	15	73009200	73009200	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS4	585	broad.mit.edu	37	15	73009200	73009200	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS9	27241	broad.mit.edu	37	7	33545221	33545221	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS9	27241	broad.mit.edu	37	7	33545221	33545221	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBS9	27241	broad.mit.edu	37	7	33545221	33545221	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS1	8537	broad.mit.edu	37	20	52591957	52591957	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS1	8537	broad.mit.edu	37	20	52612502	52612502	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS1	8537	broad.mit.edu	37	20	52591957	52591957	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS1	8537	broad.mit.edu	37	20	52612502	52612502	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS1	8537	broad.mit.edu	37	20	52591957	52591957	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS1	8537	broad.mit.edu	37	20	52612502	52612502	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	59024873	59024873	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCAS3	54828	broad.mit.edu	37	17	59024873	59024873	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11B	64919	broad.mit.edu	37	14	99641151	99641151	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCL11B	64919	broad.mit.edu	37	14	99641151	99641151	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDP1	55814	broad.mit.edu	37	5	70797393	70797393	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDP1	55814	broad.mit.edu	37	5	70797393	70797393	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDP1	55814	broad.mit.edu	37	5	70797393	70797393	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEGAIN	57596	broad.mit.edu	37	14	101005479	101005479	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEGAIN	57596	broad.mit.edu	37	14	101005479	101005479	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND2	139105	broad.mit.edu	37	X	18209221	18209221	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND2	139105	broad.mit.edu	37	X	18209221	18209221	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BEND2	139105	broad.mit.edu	37	X	18209221	18209221	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHMT2	23743	broad.mit.edu	37	5	78373283	78373283	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHMT2	23743	broad.mit.edu	37	5	78373283	78373283	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BHMT2	23743	broad.mit.edu	37	5	78373283	78373283	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60562750	60562750	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60562750	60562750	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICC1	80114	broad.mit.edu	37	10	60562750	60562750	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICD1	636	broad.mit.edu	37	12	32260458	32260458	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICD1	636	broad.mit.edu	37	12	32260458	32260458	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BICD1	636	broad.mit.edu	37	12	32260458	32260458	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51689596	51689596	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51689596	51689596	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN2	51411	broad.mit.edu	37	12	51689596	51689596	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32678942	32678950	+	In_Frame_Del	DEL	AAGTTGAAC	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32678942	32678950	+	In_Frame_Del	DEL	AAGTTGAAC	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32678942	32678950	+	In_Frame_Del	DEL	AAGTTGAAC	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLK	640	broad.mit.edu	37	8	11406563	11406563	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLK	640	broad.mit.edu	37	8	11406563	11406563	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP7	655	broad.mit.edu	37	20	55748235	55748235	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP7	655	broad.mit.edu	37	20	55803157	55803157	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP7	655	broad.mit.edu	37	20	55748235	55748235	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP7	655	broad.mit.edu	37	20	55803157	55803157	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP7	655	broad.mit.edu	37	20	55748235	55748235	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNIP2	663	broad.mit.edu	37	15	59961504	59961504	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNIP2	663	broad.mit.edu	37	15	59961504	59961504	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BNIP2	663	broad.mit.edu	37	15	59961504	59961504	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13605956	13605956	+	Silent	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13605956	13605956	+	Silent	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BOD1L	259282	broad.mit.edu	37	4	13605956	13605956	+	Silent	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31620695	31620695	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31620695	31620695	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPIL3	128859	broad.mit.edu	37	20	31620695	31620695	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPTF	2186	broad.mit.edu	37	17	65916018	65916018	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BPTF	2186	broad.mit.edu	37	17	65916018	65916018	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRD8	10902	broad.mit.edu	37	5	137476521	137476521	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRE	9577	broad.mit.edu	37	2	28464261	28464261	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRE	9577	broad.mit.edu	37	2	28464261	28464261	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRE	9577	broad.mit.edu	37	2	28464261	28464261	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRIP1	83990	broad.mit.edu	37	17	59760806	59760806	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRIP1	83990	broad.mit.edu	37	17	59760806	59760806	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRIP1	83990	broad.mit.edu	37	17	59760806	59760806	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK2	9024	broad.mit.edu	37	11	1466781	1466781	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79936970	79936970	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79936970	79936970	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRWD3	254065	broad.mit.edu	37	X	79936970	79936970	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTLA	151888	broad.mit.edu	37	3	112198678	112198678	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BTLA	151888	broad.mit.edu	37	3	112198678	112198678	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1B	701	broad.mit.edu	37	15	40468681	40468681	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1B	701	broad.mit.edu	37	15	40468681	40468681	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB1B	701	broad.mit.edu	37	15	40468681	40468681	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BUB3	9184	broad.mit.edu	37	10	124923182	124923182	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BZRAP1	9256	broad.mit.edu	37	17	56393539	56393539	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BZRAP1	9256	broad.mit.edu	37	17	56393539	56393539	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BZRAP1	9256	broad.mit.edu	37	17	56393539	56393539	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf11	83938	broad.mit.edu	37	10	77806779	77806779	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf11	83938	broad.mit.edu	37	10	77806779	77806779	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf11	83938	broad.mit.edu	37	10	77806779	77806779	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf12	26148	broad.mit.edu	37	10	98743749	98743749	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf82	143379	broad.mit.edu	37	10	118425181	118425181	+	Missense_Mutation	SNP	G	T	T	rs138140121	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf82	143379	broad.mit.edu	37	10	118425181	118425181	+	Missense_Mutation	SNP	G	T	T	rs138140121	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf82	143379	broad.mit.edu	37	10	118425181	118425181	+	Missense_Mutation	SNP	G	T	T	rs138140121	byFrequency	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33565835	33565835	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33565835	33565835	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf41	25758	broad.mit.edu	37	11	33565835	33565835	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf65	160140	broad.mit.edu	37	11	108276128	108276128	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf65	160140	broad.mit.edu	37	11	108276128	108276128	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf65	160140	broad.mit.edu	37	11	108276128	108276128	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf9	745	broad.mit.edu	37	11	61539458	61539458	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf9	745	broad.mit.edu	37	11	61539458	61539458	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112717328	112717328	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf51	283450	broad.mit.edu	37	12	112717328	112717328	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf63	374467	broad.mit.edu	37	12	97073311	97073311	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf63	374467	broad.mit.edu	37	12	97073311	97073311	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf63	374467	broad.mit.edu	37	12	97073311	97073311	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf34	79866	broad.mit.edu	37	13	73319235	73319235	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf34	79866	broad.mit.edu	37	13	73319235	73319235	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf34	79866	broad.mit.edu	37	13	73319235	73319235	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf109	26175	broad.mit.edu	37	14	93653197	93653197	+	3'UTR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf109	26175	broad.mit.edu	37	14	93653197	93653197	+	3'UTR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf145	145508	broad.mit.edu	37	14	81223072	81223072	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf179	112752	broad.mit.edu	37	14	76452119	76452119	+	5'UTR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf43	91748	broad.mit.edu	37	14	74192094	74192094	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf43	91748	broad.mit.edu	37	14	74192094	74192094	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf43	91748	broad.mit.edu	37	14	74192094	74192094	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf27	123591	broad.mit.edu	37	15	76452380	76452380	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf27	123591	broad.mit.edu	37	15	76452380	76452380	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf27	123591	broad.mit.edu	37	15	76452380	76452380	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf52	388115	broad.mit.edu	37	15	40628796	40628796	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf52	388115	broad.mit.edu	37	15	40628796	40628796	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf60	283677	broad.mit.edu	37	15	73852136	73852136	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf60	283677	broad.mit.edu	37	15	73852136	73852136	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf60	283677	broad.mit.edu	37	15	73852136	73852136	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf3	750	broad.mit.edu	37	16	90095676	90095676	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf3	750	broad.mit.edu	37	16	90095676	90095676	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf70	80262	broad.mit.edu	37	16	67178685	67178685	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf70	80262	broad.mit.edu	37	16	67178685	67178685	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf70	80262	broad.mit.edu	37	16	67178685	67178685	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf78	123970	broad.mit.edu	37	16	49408055	49408055	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C16orf78	123970	broad.mit.edu	37	16	49408055	49408055	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QB	713	broad.mit.edu	37	1	22986096	22986096	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QB	713	broad.mit.edu	37	1	22986096	22986096	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QB	713	broad.mit.edu	37	1	22986096	22986096	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF1	114897	broad.mit.edu	37	17	77040266	77040266	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF1	114897	broad.mit.edu	37	17	77040266	77040266	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF3	114899	broad.mit.edu	37	5	34033348	34033348	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF3	114899	broad.mit.edu	37	5	34033348	34033348	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1QTNF3	114899	broad.mit.edu	37	5	34033348	34033348	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf116	79098	broad.mit.edu	37	1	207195442	207195442	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf157	284573	broad.mit.edu	37	1	204009347	204009347	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf157	284573	broad.mit.edu	37	1	204009347	204009347	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf157	284573	broad.mit.edu	37	1	204009347	204009347	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75042610	75042610	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75097613	75097613	+	Splice_Site	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75097784	75097784	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75042610	75042610	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75097613	75097613	+	Splice_Site	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75042610	75042610	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf173	127254	broad.mit.edu	37	1	75097613	75097613	+	Splice_Site	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf49	84066	broad.mit.edu	37	1	178490160	178490160	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf49	84066	broad.mit.edu	37	1	178489731	178489731	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60491231	60491231	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60491231	60491231	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C1orf87	127795	broad.mit.edu	37	1	60491231	60491231	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf114	92747	broad.mit.edu	37	20	31873972	31873972	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf114	92747	broad.mit.edu	37	20	31873972	31873972	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf114	92747	broad.mit.edu	37	20	31873972	31873972	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf42	150297	broad.mit.edu	37	22	32550243	32550243	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf42	150297	broad.mit.edu	37	22	32550243	32550243	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf42	150297	broad.mit.edu	37	22	32550243	32550243	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf9	23313	broad.mit.edu	37	22	45598869	45598869	+	Splice_Site	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf9	23313	broad.mit.edu	37	22	45598869	45598869	+	Splice_Site	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C22orf9	23313	broad.mit.edu	37	22	45598869	45598869	+	Splice_Site	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2CD3	26005	broad.mit.edu	37	11	73768380	73768380	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2CD3	26005	broad.mit.edu	37	11	73768380	73768380	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2CD3	26005	broad.mit.edu	37	11	73768380	73768380	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf73	129852	broad.mit.edu	37	2	54558013	54558013	+	5'Flank	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf78	388960	broad.mit.edu	37	2	74043181	74043181	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf78	388960	broad.mit.edu	37	2	74043181	74043181	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf78	388960	broad.mit.edu	37	2	74043181	74043181	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63349301	63349301	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf86	51057	broad.mit.edu	37	2	63349301	63349301	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf26	84319	broad.mit.edu	37	3	99897073	99897073	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf26	84319	broad.mit.edu	37	3	99897073	99897073	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf67	200844	broad.mit.edu	37	3	58856153	58856153	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf67	200844	broad.mit.edu	37	3	58856153	58856153	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf67	200844	broad.mit.edu	37	3	58856153	58856153	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113486363	113486363	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113486363	113486363	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf21	55345	broad.mit.edu	37	4	113486363	113486363	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf22	255119	broad.mit.edu	37	4	81307881	81307881	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf22	255119	broad.mit.edu	37	4	81866088	81866088	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf22	255119	broad.mit.edu	37	4	81307881	81307881	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf22	255119	broad.mit.edu	37	4	81866088	81866088	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf22	255119	broad.mit.edu	37	4	81866088	81866088	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf35	85438	broad.mit.edu	37	4	71200714	71200714	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf35	85438	broad.mit.edu	37	4	71200714	71200714	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf35	85438	broad.mit.edu	37	4	71200714	71200714	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	98480220	98480220	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	98480220	98480220	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	98480220	98480220	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf37	285555	broad.mit.edu	37	4	98865110	98865110	+	Silent	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf6	10141	broad.mit.edu	37	4	5527280	5527280	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5	727	broad.mit.edu	37	9	123725388	123725388	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5	727	broad.mit.edu	37	9	123725388	123725388	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37211203	37211203	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37211203	37211203	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf42	65250	broad.mit.edu	37	5	37211203	37211203	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165714862	165714862	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165714864	165714864	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165714862	165714862	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf118	168090	broad.mit.edu	37	6	165714864	165714864	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47846506	47846506	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47846506	47846506	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf138	442213	broad.mit.edu	37	6	47846506	47846506	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf165	154313	broad.mit.edu	37	6	88150897	88150897	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40931243	40931243	+	Splice_Site	DEL	T	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40955834	40955834	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40931243	40931243	+	Splice_Site	DEL	T	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40955834	40955834	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40931243	40931243	+	Splice_Site	DEL	T	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40964907	40964907	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf27	221927	broad.mit.edu	37	7	2582880	2582880	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf27	221927	broad.mit.edu	37	7	2582880	2582880	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf27	221927	broad.mit.edu	37	7	2582880	2582880	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120737691	120737691	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120911454	120911455	+	Missense_Mutation	DNP	AC	TA	TA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120737691	120737691	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120911454	120911455	+	Missense_Mutation	DNP	AC	TA	TA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120737691	120737691	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf58	79974	broad.mit.edu	37	7	120911454	120911454	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8B	732	broad.mit.edu	37	1	57409484	57409484	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8B	732	broad.mit.edu	37	1	57409484	57409484	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8B	732	broad.mit.edu	37	1	57409484	57409484	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf80	389643	broad.mit.edu	37	8	27927077	27927077	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf80	389643	broad.mit.edu	37	8	27888782	27888782	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf80	389643	broad.mit.edu	37	8	27927077	27927077	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf80	389643	broad.mit.edu	37	8	27887919	27887919	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf80	389643	broad.mit.edu	37	8	27888782	27888782	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf80	389643	broad.mit.edu	37	8	27927077	27927077	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf131	138724	broad.mit.edu	37	9	35045842	35045842	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf131	138724	broad.mit.edu	37	9	35045842	35045842	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf131	138724	broad.mit.edu	37	9	35045842	35045842	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf140	89958	broad.mit.edu	37	9	139959973	139959973	+	Splice_Site	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf140	89958	broad.mit.edu	37	9	139959973	139959973	+	Splice_Site	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf64	84267	broad.mit.edu	37	9	86570403	86570403	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf64	84267	broad.mit.edu	37	9	86570403	86570403	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf64	84267	broad.mit.edu	37	9	86570403	86570403	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf68	55064	broad.mit.edu	37	9	4635423	4635423	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf68	55064	broad.mit.edu	37	9	4635423	4635423	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf68	55064	broad.mit.edu	37	9	4635423	4635423	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf72	203228	broad.mit.edu	37	9	27556699	27556699	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf72	203228	broad.mit.edu	37	9	27556699	27556699	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf72	203228	broad.mit.edu	37	9	27556699	27556699	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf84	158401	broad.mit.edu	37	9	114467664	114467664	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf84	158401	broad.mit.edu	37	9	114538232	114538232	+	Missense_Mutation	SNP	G	T	T	rs56921768		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf84	158401	broad.mit.edu	37	9	114467664	114467664	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf84	158401	broad.mit.edu	37	9	114538232	114538232	+	Missense_Mutation	SNP	G	T	T	rs56921768		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf84	158401	broad.mit.edu	37	9	114467664	114467664	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf84	158401	broad.mit.edu	37	9	114538232	114538232	+	Missense_Mutation	SNP	G	T	T	rs56921768		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf93	203238	broad.mit.edu	37	9	15745522	15745522	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf93	203238	broad.mit.edu	37	9	15745522	15745522	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf93	203238	broad.mit.edu	37	9	15745522	15745522	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA10	56934	broad.mit.edu	37	17	49731210	49731210	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP1	9478	broad.mit.edu	37	12	121088332	121088332	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP1	9478	broad.mit.edu	37	12	121099132	121099132	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP1	9478	broad.mit.edu	37	12	121088332	121088332	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP1	9478	broad.mit.edu	37	12	121099132	121099132	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP1	9478	broad.mit.edu	37	12	121088332	121088332	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13445186	13445186	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13445186	13445186	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1A	773	broad.mit.edu	37	19	13445186	13445186	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2711003	2711003	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2706206	2706206	+	Intron	SNP	G	A	A	rs144915499	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2711003	2711003	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2711003	2711003	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53815794	53815794	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53815794	53815794	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1D	776	broad.mit.edu	37	3	53815794	53815794	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181689959	181689959	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181759585	181759585	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181689959	181689959	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181740584	181740584	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181759585	181759585	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181689959	181689959	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181740584	181740584	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181759585	181759585	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49069089	49069089	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49069089	49069089	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1F	778	broad.mit.edu	37	X	49069089	49069089	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201029820	201029820	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81799836	81799836	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81799836	81799836	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81799836	81799836	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1995277	1995277	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1995277	1995277	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D4	93589	broad.mit.edu	37	12	1995277	1995277	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB4	785	broad.mit.edu	37	2	152727146	152727146	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB4	785	broad.mit.edu	37	2	152727146	152727146	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNB4	785	broad.mit.edu	37	2	152727146	152727146	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG2	10369	broad.mit.edu	37	22	36976309	36976309	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG6	59285	broad.mit.edu	37	19	54496020	54496021	+	5'UTR	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG6	59285	broad.mit.edu	37	19	54496020	54496021	+	5'UTR	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62636588	62636588	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62751567	62751567	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62636588	62636588	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62751567	62751567	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62636588	62636588	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADPS	8618	broad.mit.edu	37	3	62751567	62751567	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71411470	71411470	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71411470	71411470	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALB2	794	broad.mit.edu	37	16	71411470	71411470	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALD1	800	broad.mit.edu	37	7	134653160	134653160	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALD1	800	broad.mit.edu	37	7	134653160	134653160	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALD1	800	broad.mit.edu	37	7	134653160	134653160	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALHM2	51063	broad.mit.edu	37	10	105209690	105209690	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALHM2	51063	broad.mit.edu	37	10	105209690	105209690	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALHM2	51063	broad.mit.edu	37	10	105209690	105209690	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALU	813	broad.mit.edu	37	7	128394426	128394426	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALU	813	broad.mit.edu	37	7	128394426	128394426	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALU	813	broad.mit.edu	37	7	128394426	128394426	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2A	815	broad.mit.edu	37	5	149644579	149644579	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK2A	815	broad.mit.edu	37	5	149644579	149644579	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK4	814	broad.mit.edu	37	5	110730473	110730473	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK4	814	broad.mit.edu	37	5	110730473	110730473	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK4	814	broad.mit.edu	37	5	110730473	110730473	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1L1	23271	broad.mit.edu	37	1	200709129	200709129	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1L1	23271	broad.mit.edu	37	1	200709129	200709129	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMSAP1L1	23271	broad.mit.edu	37	1	200709129	200709129	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMTA1	23261	broad.mit.edu	37	1	7700548	7700548	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPG	822	broad.mit.edu	37	2	85625790	85625790	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN13	92291	broad.mit.edu	37	2	30966564	30966564	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPN9	10753	broad.mit.edu	37	1	230914756	230914756	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPS2	84698	broad.mit.edu	37	12	75737780	75737780	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPS2	84698	broad.mit.edu	37	12	75737780	75737780	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPS2	84698	broad.mit.edu	37	12	75737780	75737780	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2957068	2957068	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2985553	2985553	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CARD11	84433	broad.mit.edu	37	7	2985553	2985553	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ2	845	broad.mit.edu	37	1	116260375	116260375	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ2	845	broad.mit.edu	37	1	116260375	116260375	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ2	845	broad.mit.edu	37	1	116260375	116260375	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER4	378807	broad.mit.edu	37	1	26524383	26524383	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER4	378807	broad.mit.edu	37	1	26524383	26524383	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CATSPER4	378807	broad.mit.edu	37	1	26524383	26524383	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC102B	79839	broad.mit.edu	37	18	66564585	66564585	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219903373	219903373	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219903373	219903373	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219903373	219903373	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC111	201973	broad.mit.edu	37	4	185593278	185593278	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC111	201973	broad.mit.edu	37	4	185593278	185593278	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC111	201973	broad.mit.edu	37	4	185593278	185593278	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC136	64753	broad.mit.edu	37	7	128450286	128450286	+	Missense_Mutation	SNP	C	A	A	rs116868322	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC136	64753	broad.mit.edu	37	7	128450286	128450286	+	Missense_Mutation	SNP	C	A	A	rs116868322	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC136	64753	broad.mit.edu	37	7	128445746	128445746	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC136	64753	broad.mit.edu	37	7	128450286	128450286	+	Missense_Mutation	SNP	C	A	A	rs116868322	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC144C	348254	broad.mit.edu	37	17	20269168	20269168	+	RNA	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC144C	348254	broad.mit.edu	37	17	20269170	20269170	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC144C	348254	broad.mit.edu	37	17	20269168	20269168	+	RNA	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC144C	348254	broad.mit.edu	37	17	20269170	20269170	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC144C	348254	broad.mit.edu	37	17	20269168	20269168	+	RNA	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC144C	348254	broad.mit.edu	37	17	20269170	20269170	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC153	283152	broad.mit.edu	37	11	119061008	119061008	+	3'UTR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC153	283152	broad.mit.edu	37	11	119061646	119061646	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC153	283152	broad.mit.edu	37	11	119061008	119061008	+	3'UTR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC153	283152	broad.mit.edu	37	11	119061646	119061646	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC153	283152	broad.mit.edu	37	11	119061008	119061008	+	3'UTR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC158	339965	broad.mit.edu	37	4	77322500	77322500	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC33	80125	broad.mit.edu	37	15	74627454	74627454	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC33	80125	broad.mit.edu	37	15	74627454	74627454	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC33	80125	broad.mit.edu	37	15	74627454	74627454	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC60	160777	broad.mit.edu	37	12	119957762	119957762	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC60	160777	broad.mit.edu	37	12	119957762	119957762	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC61	729440	broad.mit.edu	37	19	46521469	46521469	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111336809	111336809	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111336809	111336809	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111336809	111336809	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC80	151887	broad.mit.edu	37	3	112335750	112335750	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNO	10309	broad.mit.edu	37	5	54527229	54527229	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCNO	10309	broad.mit.edu	37	5	54527229	54527229	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT8L2	150160	broad.mit.edu	37	22	17071902	17071902	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT8L2	150160	broad.mit.edu	37	22	17071902	17071902	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCT8L2	150160	broad.mit.edu	37	22	17071902	17071902	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74440084	74440084	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74440084	74440084	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD109	135228	broad.mit.edu	37	6	74440084	74440084	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163	9332	broad.mit.edu	37	12	7636091	7636092	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163	9332	broad.mit.edu	37	12	7636091	7636092	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD163	9332	broad.mit.edu	37	12	7636091	7636092	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1B	910	broad.mit.edu	37	1	158299064	158299064	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1C	911	broad.mit.edu	37	1	158261701	158261701	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158323730	158323730	+	5'UTR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158323730	158323730	+	5'UTR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1E	913	broad.mit.edu	37	1	158323730	158323730	+	5'UTR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD22	933	broad.mit.edu	37	19	35836516	35836516	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD22	933	broad.mit.edu	37	19	35836516	35836516	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD22	933	broad.mit.edu	37	19	35836516	35836516	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD244	51744	broad.mit.edu	37	1	160808305	160808305	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD244	51744	broad.mit.edu	37	1	160811267	160811267	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD244	51744	broad.mit.edu	37	1	160808305	160808305	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD244	51744	broad.mit.edu	37	1	160811267	160811267	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD244	51744	broad.mit.edu	37	1	160808305	160808305	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD244	51744	broad.mit.edu	37	1	160811267	160811267	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD274	29126	broad.mit.edu	37	9	5465463	5465463	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD274	29126	broad.mit.edu	37	9	5465463	5465463	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD36	948	broad.mit.edu	37	7	80006916	80006916	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD3D	915	broad.mit.edu	37	11	118213394	118213394	+	5'UTR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5L	922	broad.mit.edu	37	1	157803126	157803126	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5L	922	broad.mit.edu	37	1	157803126	157803126	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD5L	922	broad.mit.edu	37	1	157803126	157803126	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14C	168448	broad.mit.edu	37	7	48964294	48964294	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14C	168448	broad.mit.edu	37	7	48964294	48964294	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC14C	168448	broad.mit.edu	37	7	48964294	48964294	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC27	996	broad.mit.edu	37	17	45215952	45215952	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPB	9578	broad.mit.edu	37	14	103416642	103416642	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPB	9578	broad.mit.edu	37	14	103416642	103416642	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPB	9578	broad.mit.edu	37	14	103416642	103416642	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC73	79577	broad.mit.edu	37	1	193111176	193111176	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21765146	21765146	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68849475	68849475	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68849475	68849475	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH1	999	broad.mit.edu	37	16	68849475	68849475	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH22	64405	broad.mit.edu	37	20	44841625	44841625	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH22	64405	broad.mit.edu	37	20	44841625	44841625	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH22	64405	broad.mit.edu	37	20	44841625	44841625	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60469904	60469904	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH4	1002	broad.mit.edu	37	20	60469904	60469904	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31297485	31297485	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL4	344387	broad.mit.edu	37	2	39456811	39456811	+	5'Flank	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDKL4	344387	broad.mit.edu	37	2	39456811	39456811	+	5'Flank	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDX4	1046	broad.mit.edu	37	X	72667007	72667007	+	5'Flank	DEL	A	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDX4	1046	broad.mit.edu	37	X	72667007	72667007	+	5'Flank	DEL	A	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDX4	1046	broad.mit.edu	37	X	72667007	72667007	+	5'Flank	DEL	A	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM18	729767	broad.mit.edu	37	19	51986279	51986279	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM18	729767	broad.mit.edu	37	19	51986279	51986279	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM18	729767	broad.mit.edu	37	19	51986279	51986279	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM5	1048	broad.mit.edu	37	19	42225229	42225229	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEACAM5	1048	broad.mit.edu	37	19	42225229	42225229	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA2A	63036	broad.mit.edu	37	1	15789159	15789159	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA2A	63036	broad.mit.edu	37	1	15789159	15789159	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELA2A	63036	broad.mit.edu	37	1	15789159	15789159	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP120	153241	broad.mit.edu	37	5	122736483	122736483	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP120	153241	broad.mit.edu	37	5	122736483	122736483	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49048050	49048050	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49048050	49048050	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP152	22995	broad.mit.edu	37	15	49048050	49048050	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117281624	117281624	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117281624	117281624	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP164	22897	broad.mit.edu	37	11	117281624	117281624	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP290	80184	broad.mit.edu	37	12	88535088	88535088	+	5'UTR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP290	80184	broad.mit.edu	37	12	88535088	88535088	+	5'UTR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	180080331	180080331	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	180080331	180080331	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP350	9857	broad.mit.edu	37	1	180080331	180080331	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP57	9702	broad.mit.edu	37	11	95564074	95564075	+	Intron	INS	-	TGAG	TGAG	rs147497264	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEP78	84131	broad.mit.edu	37	9	80869847	80869847	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CER1	9350	broad.mit.edu	37	9	14722769	14722769	+	5'Flank	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CER1	9350	broad.mit.edu	37	9	14722769	14722769	+	5'Flank	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CER1	9350	broad.mit.edu	37	9	14722769	14722769	+	5'Flank	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES1	1066	broad.mit.edu	37	16	55860292	55860292	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES1	1066	broad.mit.edu	37	16	55860292	55860292	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES1	1066	broad.mit.edu	37	16	55860292	55860292	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CES3	23491	broad.mit.edu	37	16	67007029	67007029	+	3'UTR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR4	10877	broad.mit.edu	37	1	196871741	196871741	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR4	10877	broad.mit.edu	37	1	196871741	196871741	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR4	10877	broad.mit.edu	37	1	196871741	196871741	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196946876	196946876	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196967432	196967432	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196946876	196946876	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196967432	196967432	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196946876	196946876	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFHR5	81494	broad.mit.edu	37	1	196967432	196967432	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196709593	196709593	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFH	3075	broad.mit.edu	37	1	196654266	196654266	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50835836	50835836	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50835836	50835836	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHAT	1103	broad.mit.edu	37	10	50835836	50835836	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6173020	6173020	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6173020	6173020	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD5	26038	broad.mit.edu	37	1	6173020	6173020	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40081428	40081428	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHI3L2	1117	broad.mit.edu	37	1	111770280	111770280	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHI3L2	1117	broad.mit.edu	37	1	111770280	111770280	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHI3L2	1117	broad.mit.edu	37	1	111770280	111770280	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHP2	63928	broad.mit.edu	37	16	23767594	23767594	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHP2	63928	broad.mit.edu	37	16	23767594	23767594	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHPF	79586	broad.mit.edu	37	2	220404338	220404338	+	Missense_Mutation	SNP	C	G	G	rs149014949		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHPF	79586	broad.mit.edu	37	2	220404338	220404338	+	Missense_Mutation	SNP	C	G	G	rs149014949		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHPF	79586	broad.mit.edu	37	2	220404338	220404338	+	Missense_Mutation	SNP	C	G	G	rs149014949		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST13	166012	broad.mit.edu	37	3	126255153	126255153	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST13	166012	broad.mit.edu	37	3	126255153	126255153	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST13	166012	broad.mit.edu	37	3	126255153	126255153	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST2	9435	broad.mit.edu	37	3	142840553	142840553	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHST2	9435	broad.mit.edu	37	3	142840553	142840553	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIB4	130106	broad.mit.edu	37	2	26818175	26818175	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIB4	130106	broad.mit.edu	37	2	26818175	26818175	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIC	23152	broad.mit.edu	37	19	42794026	42794026	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIC	23152	broad.mit.edu	37	19	42794026	42794026	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120263085	120263085	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120263085	120263085	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIT	11113	broad.mit.edu	37	12	120263085	120263085	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIZ1	25792	broad.mit.edu	37	9	130940541	130940541	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CIZ1	25792	broad.mit.edu	37	9	130940541	130940541	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKMT1B	1159	broad.mit.edu	37	15	43890471	43890471	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKMT1B	1159	broad.mit.edu	37	15	43890471	43890471	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CKMT1B	1159	broad.mit.edu	37	15	43890471	43890471	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP1	23332	broad.mit.edu	37	2	122106236	122106236	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP1	23332	broad.mit.edu	37	2	122106236	122106236	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLASP1	23332	broad.mit.edu	37	2	122106236	122106236	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN4	1183	broad.mit.edu	37	X	10176257	10176257	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN6	1185	broad.mit.edu	37	1	11896216	11896216	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN7	1186	broad.mit.edu	37	16	1499236	1499236	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN7	1186	broad.mit.edu	37	16	1499236	1499236	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLC	1178	broad.mit.edu	37	19	40228577	40228577	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN14	23562	broad.mit.edu	37	21	37833580	37833580	+	Missense_Mutation	SNP	C	A	A	rs142846225	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN14	23562	broad.mit.edu	37	21	37833580	37833580	+	Missense_Mutation	SNP	C	A	A	rs142846225	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDN14	23562	broad.mit.edu	37	21	37833580	37833580	+	Missense_Mutation	SNP	C	A	A	rs142846225	byFrequency	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDND1	56650	broad.mit.edu	37	3	98241753	98241753	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLDND1	56650	broad.mit.edu	37	3	98241753	98241753	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4F	165530	broad.mit.edu	37	2	71047032	71047032	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4F	165530	broad.mit.edu	37	2	71047032	71047032	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC4F	165530	broad.mit.edu	37	2	71047032	71047032	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC5A	23601	broad.mit.edu	37	7	141645062	141645062	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC5A	23601	broad.mit.edu	37	7	141645062	141645062	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC5A	23601	broad.mit.edu	37	7	141645062	141645062	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPS	1208	broad.mit.edu	37	6	35763071	35763071	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPS	1208	broad.mit.edu	37	6	35764965	35764965	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPS	1208	broad.mit.edu	37	6	35763071	35763071	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPS	1208	broad.mit.edu	37	6	35764965	35764965	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPS	1208	broad.mit.edu	37	6	35763071	35763071	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPS	1208	broad.mit.edu	37	6	35764965	35764965	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140265582	140265582	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140265584	140265584	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140265582	140265582	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140265584	140265584	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140265582	140265582	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNBD1	168975	broad.mit.edu	37	8	88249007	88249007	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87641337	87641337	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87645122	87645122	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87641337	87641337	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87645122	87645122	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87641337	87641337	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNGB3	54714	broad.mit.edu	37	8	87645122	87645122	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21508495	21508495	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21508495	21508495	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR3	154043	broad.mit.edu	37	6	154732033	154732033	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR3	154043	broad.mit.edu	37	6	154732033	154732033	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR3	154043	broad.mit.edu	37	6	154732033	154732033	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58610309	58610309	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58616700	58616700	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58610309	58610309	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58616700	58616700	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58610309	58610309	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT1	23019	broad.mit.edu	37	16	58616700	58616700	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT4	4850	broad.mit.edu	37	7	135048035	135048035	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT4	4850	broad.mit.edu	37	7	135048035	135048035	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNOT4	4850	broad.mit.edu	37	7	135048035	135048035	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNO	55330	broad.mit.edu	37	4	6718442	6718442	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNO	55330	broad.mit.edu	37	4	6718442	6718442	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNO	55330	broad.mit.edu	37	4	6718442	6718442	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41419239	41419239	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41419239	41419239	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41419239	41419239	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205030382	205030382	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205042265	205042265	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205030382	205030382	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205042265	205042265	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205030382	205030382	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN2	6900	broad.mit.edu	37	1	205042265	205042265	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN3	5067	broad.mit.edu	37	3	74315627	74315627	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN4	152330	broad.mit.edu	37	3	2908612	2908612	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN4	152330	broad.mit.edu	37	3	2908612	2908612	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN4	152330	broad.mit.edu	37	3	2908612	2908612	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1415642	1415642	+	Silent	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1415642	1415642	+	Silent	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN6	27255	broad.mit.edu	37	3	1415642	1415642	+	Silent	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147259322	147259322	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147259322	147259322	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP2	26047	broad.mit.edu	37	7	147259322	147259322	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76486483	76486484	+	Missense_Mutation	DNP	CC	AG	AG			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76587152	76587152	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76486483	76486484	+	Missense_Mutation	DNP	CC	AG	AG			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76587152	76587152	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76486483	76486484	+	Missense_Mutation	DNP	CC	AG	AG			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125555897	125555897	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125555897	125555897	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP5	129684	broad.mit.edu	37	2	125555897	125555897	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51096651	51096651	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51111277	51111277	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51096651	51096651	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51111277	51111277	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51096651	51096651	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBL	23242	broad.mit.edu	37	7	51111277	51111277	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG5	10466	broad.mit.edu	37	7	107188899	107188899	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG5	10466	broad.mit.edu	37	7	107188899	107188899	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG7	91949	broad.mit.edu	37	16	23453753	23453753	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG7	91949	broad.mit.edu	37	16	23453753	23453753	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COG7	91949	broad.mit.edu	37	16	23453753	23453753	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A1	1301	broad.mit.edu	37	1	103347308	103347308	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL13A1	1305	broad.mit.edu	37	10	71582220	71582220	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121322173	121322173	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121322173	121322173	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121322173	121322173	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101806779	101806779	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101817383	101817383	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101806779	101806779	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101817383	101817383	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101824747	101824747	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101806779	101806779	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL15A1	1306	broad.mit.edu	37	9	101817383	101817383	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL16A1	1307	broad.mit.edu	37	1	32149650	32149650	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL16A1	1307	broad.mit.edu	37	1	32149650	32149650	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL18A1	80781	broad.mit.edu	37	21	46914555	46914555	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL18A1	80781	broad.mit.edu	37	21	46914555	46914555	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70866477	70866477	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL19A1	1310	broad.mit.edu	37	6	70866477	70866477	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94048918	94048918	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94046983	94046983	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94048918	94048918	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94048918	94048918	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139629313	139629313	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139643072	139643072	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139824060	139824060	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139629313	139629313	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139643072	139643072	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139824060	139824060	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139643072	139643072	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139824060	139824060	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL25A1	84570	broad.mit.edu	37	4	109861765	109861765	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	117027389	117027389	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	117027389	117027389	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL27A1	85301	broad.mit.edu	37	9	117027389	117027389	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189849689	189849689	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189872628	189872628	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189849689	189849689	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189872628	189872628	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189849689	189849689	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL3A1	1281	broad.mit.edu	37	2	189872628	189872628	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111132683	111132683	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111158944	111158944	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111132683	111132683	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111158944	111158944	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A2	1284	broad.mit.edu	37	13	111132683	111132683	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137623482	137623482	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137646119	137646119	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137655627	137655627	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137658860	137658860	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137715349	137715349	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137623482	137623482	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137646119	137646119	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137655627	137655627	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137658860	137658860	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137715349	137715349	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137623482	137623482	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137646119	137646119	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137658860	137658860	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A1	1289	broad.mit.edu	37	9	137715349	137715349	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189904126	189904126	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189904126	189904126	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189904126	189904126	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A2	1292	broad.mit.edu	37	21	47541289	47541289	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48629039	48629039	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48629039	48629039	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL7A1	1294	broad.mit.edu	37	3	48629039	48629039	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A3	1299	broad.mit.edu	37	20	61460982	61460982	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A3	1299	broad.mit.edu	37	20	61460982	61460982	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC12	81035	broad.mit.edu	37	18	321620	321620	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC12	81035	broad.mit.edu	37	18	321620	321620	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COLEC12	81035	broad.mit.edu	37	18	321620	321620	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPG2	26958	broad.mit.edu	37	7	130288723	130288723	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX6B1	1340	broad.mit.edu	37	19	36145450	36145450	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX6B1	1340	broad.mit.edu	37	19	36145450	36145450	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX6B1	1340	broad.mit.edu	37	19	36145450	36145450	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX7B2	170712	broad.mit.edu	37	4	46737329	46737329	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX7B2	170712	broad.mit.edu	37	4	46737329	46737329	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COX7B2	170712	broad.mit.edu	37	4	46737329	46737329	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA3	1359	broad.mit.edu	37	3	148596350	148596350	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB1	64506	broad.mit.edu	37	15	83215961	83215961	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB1	64506	broad.mit.edu	37	15	83215961	83215961	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB1	64506	broad.mit.edu	37	15	83215961	83215961	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB3	22849	broad.mit.edu	37	10	93898081	93898081	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB3	22849	broad.mit.edu	37	10	93898081	93898081	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPEB3	22849	broad.mit.edu	37	10	93898081	93898081	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166326063	166326063	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166326063	166326063	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPE	1363	broad.mit.edu	37	4	166326063	166326063	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE5	57699	broad.mit.edu	37	6	36715860	36715860	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE5	57699	broad.mit.edu	37	6	36715860	36715860	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE5	57699	broad.mit.edu	37	6	36715860	36715860	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211515047	211515047	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211515047	211515047	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211515047	211515047	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRAMP1L	57585	broad.mit.edu	37	16	1706003	1706003	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRAMP1L	57585	broad.mit.edu	37	16	1706003	1706003	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197411194	197411194	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197411194	197411194	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197411194	197411194	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3L2	64764	broad.mit.edu	37	7	137600584	137600584	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3L2	64764	broad.mit.edu	37	7	137600584	137600584	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB3L2	64764	broad.mit.edu	37	7	137600584	137600584	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP1	167	broad.mit.edu	37	6	49808566	49808566	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP1	167	broad.mit.edu	37	6	49808566	49808566	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP1	167	broad.mit.edu	37	6	49808566	49808566	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD1	83690	broad.mit.edu	37	8	75932301	75932301	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD2	83716	broad.mit.edu	37	16	84906614	84906614	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD2	83716	broad.mit.edu	37	16	84906614	84906614	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD2	83716	broad.mit.edu	37	16	84906614	84906614	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	87011391	87011391	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	87011391	87011391	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	87011391	87011391	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTAP	10491	broad.mit.edu	37	3	33171288	33171288	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRTAP	10491	broad.mit.edu	37	3	33171288	33171288	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRY2	1408	broad.mit.edu	37	11	45893463	45893463	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19263715	19263715	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19263715	19263715	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSH1	1442	broad.mit.edu	37	17	61973647	61973647	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSH1	1442	broad.mit.edu	37	17	61973647	61973647	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2966218	2966218	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2967787	2967787	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2976187	2976187	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3216722	3216722	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2966218	2966218	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2967787	2967787	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2976187	2976187	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	3216722	3216722	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2967787	2967787	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34006151	34006151	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34190861	34190861	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34209016	34209016	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34238409	34238409	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34006151	34006151	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34190861	34190861	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34209016	34209016	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34238409	34238409	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34006151	34006151	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34037412	34037412	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34190861	34190861	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34209016	34209016	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD2	114784	broad.mit.edu	37	1	34238409	34238409	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113246706	113246706	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113313973	113313973	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113569119	113569119	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113668510	113668510	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113988292	113988292	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113246706	113246706	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113313973	113313973	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113569119	113569119	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113668510	113668510	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113988292	113988292	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113246706	113246706	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113299394	113299394	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113313973	113313973	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113348989	113348989	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113569119	113569119	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113668510	113668510	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113988292	113988292	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSN3	1448	broad.mit.edu	37	4	71114727	71114727	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSN3	1448	broad.mit.edu	37	4	71114727	71114727	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSN3	1448	broad.mit.edu	37	4	71114727	71114727	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1A1	1452	broad.mit.edu	37	5	148925236	148925236	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1A1	1452	broad.mit.edu	37	5	148925236	148925236	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK1A1	1452	broad.mit.edu	37	5	148925236	148925236	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSNK2A1	1457	broad.mit.edu	37	20	480619	480621	+	Intron	DEL	AAT	-	-	rs205904	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST1	1469	broad.mit.edu	37	20	23728528	23728528	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST7	8530	broad.mit.edu	37	20	24940200	24940200	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST7	8530	broad.mit.edu	37	20	24940200	24940200	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CST7	8530	broad.mit.edu	37	20	24940200	24940200	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTF3	1479	broad.mit.edu	37	11	33120404	33120404	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTF3	1479	broad.mit.edu	37	11	33120404	33120404	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTF3	1479	broad.mit.edu	37	11	33120404	33120404	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTDSPL	10217	broad.mit.edu	37	3	38006176	38006176	+	Intron	DEL	A	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	79422961	79422961	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80772075	80772075	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80816575	80816575	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	79422961	79422961	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80772075	80772075	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80816575	80816575	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	79422961	79422961	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80772075	80772075	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80816575	80816575	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	68936738	68936738	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA3	29119	broad.mit.edu	37	10	68936738	68936738	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11346694	11346694	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11346694	11346694	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	10981745	10981745	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11346694	11346694	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTPS2	56474	broad.mit.edu	37	X	16716561	16716561	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTPS2	56474	broad.mit.edu	37	X	16716561	16716561	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16873350	16873350	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16982288	16982288	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17169920	17169921	+	Nonsense_Mutation	DNP	GG	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16873350	16873350	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16982288	16982288	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17169920	17169921	+	Nonsense_Mutation	DNP	GG	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16873350	16873350	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16982288	16982288	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	17169920	17169921	+	Nonsense_Mutation	DNP	GG	AA	AA			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUEDC1	404093	broad.mit.edu	37	17	55948538	55948538	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUEDC1	404093	broad.mit.edu	37	17	55948538	55948538	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL5	8065	broad.mit.edu	37	11	107904743	107904743	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUL5	8065	broad.mit.edu	37	11	107904743	107904743	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX1	1523	broad.mit.edu	37	7	101840603	101840603	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX1	1523	broad.mit.edu	37	7	101840603	101840603	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUX1	1523	broad.mit.edu	37	7	101840603	101840603	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXADRP3	440224	broad.mit.edu	37	18	14478264	14478264	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXADRP3	440224	broad.mit.edu	37	18	14478264	14478264	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXADRP3	440224	broad.mit.edu	37	18	14478264	14478264	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf22	170063	broad.mit.edu	37	X	35966294	35966295	+	Intron	INS	-	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf22	170063	broad.mit.edu	37	X	35966294	35966295	+	Intron	INS	-	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf22	170063	broad.mit.edu	37	X	35966294	35966295	+	Intron	INS	-	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf61	203413	broad.mit.edu	37	X	115593113	115593113	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf61	203413	broad.mit.edu	37	X	115593113	115593113	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXorf61	203413	broad.mit.edu	37	X	115593113	115593113	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYBASC3	220002	broad.mit.edu	37	11	61121427	61121427	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYBASC3	220002	broad.mit.edu	37	11	61121427	61121427	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYBASC3	220002	broad.mit.edu	37	11	61121427	61121427	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYC1	1537	broad.mit.edu	37	8	145151666	145151692	+	Intron	DEL	GGCAGTGGGCATGTGGAATACTTCTCC	-	-	rs75325545		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143958386	143958386	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143959055	143959055	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143958386	143958386	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143959055	143959055	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP26A1	1592	broad.mit.edu	37	10	94834760	94834761	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A6	1548	broad.mit.edu	37	19	41350372	41350372	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2A6	1548	broad.mit.edu	37	19	41350372	41350372	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2E1	1571	broad.mit.edu	37	10	135373488	135373488	+	3'UTR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP2E1	1571	broad.mit.edu	37	10	135373488	135373488	+	3'UTR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A43	64816	broad.mit.edu	37	7	99445079	99445079	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A43	64816	broad.mit.edu	37	7	99445079	99445079	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A43	64816	broad.mit.edu	37	7	99445079	99445079	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A7	1551	broad.mit.edu	37	7	99311280	99311280	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A7	1551	broad.mit.edu	37	7	99311280	99311280	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP3A7	1551	broad.mit.edu	37	7	99311280	99311280	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F12	66002	broad.mit.edu	37	19	15794437	15794437	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15759996	15759996	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15759996	15759996	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP4F3	4051	broad.mit.edu	37	19	15759996	15759996	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2	1601	broad.mit.edu	37	5	39376907	39376907	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85404014	85404014	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85404014	85404014	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85404014	85404014	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85559989	85559989	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBC1	1620	broad.mit.edu	37	9	122075634	122075634	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBC1	1620	broad.mit.edu	37	9	122075634	122075634	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBC1	1620	broad.mit.edu	37	9	122000928	122000928	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBC1	1620	broad.mit.edu	37	9	122075634	122075634	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBH	1621	broad.mit.edu	37	9	136508756	136508756	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBH	1621	broad.mit.edu	37	9	136508756	136508756	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27999351	27999351	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27999351	27999351	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF8L1	139425	broad.mit.edu	37	X	27999351	27999351	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50942430	50942430	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50942430	50942430	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50683801	50683801	+	Missense_Mutation	SNP	G	A	A	rs138053380		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155250575	155250575	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155298498	155298498	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155250575	155250575	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155298498	155298498	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155298498	155298498	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36410405	36410405	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCLK1	9201	broad.mit.edu	37	13	36410405	36410405	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCTN5	84516	broad.mit.edu	37	16	23669846	23669846	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D1	54165	broad.mit.edu	37	3	182681763	182681763	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D1	54165	broad.mit.edu	37	3	182681763	182681763	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCUN1D1	54165	broad.mit.edu	37	3	182681763	182681763	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDC	1644	broad.mit.edu	37	7	50596906	50596906	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDC	1644	broad.mit.edu	37	7	50596906	50596906	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDC	1644	broad.mit.edu	37	7	50596906	50596906	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX3X	1654	broad.mit.edu	37	X	41207058	41207058	+	3'UTR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX3X	1654	broad.mit.edu	37	X	41207058	41207058	+	3'UTR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX56	54606	broad.mit.edu	37	7	44605694	44605694	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX56	54606	broad.mit.edu	37	7	44605696	44605696	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX56	54606	broad.mit.edu	37	7	44605694	44605694	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX56	54606	broad.mit.edu	37	7	44605696	44605696	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX56	54606	broad.mit.edu	37	7	44605694	44605694	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX56	54606	broad.mit.edu	37	7	44605696	44605696	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEF8	54849	broad.mit.edu	37	16	90020841	90020841	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEF8	54849	broad.mit.edu	37	16	90028405	90028405	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEF8	54849	broad.mit.edu	37	16	90020841	90020841	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEF8	54849	broad.mit.edu	37	16	90028405	90028405	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB110	245913	broad.mit.edu	37	6	49977033	49977033	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB110	245913	broad.mit.edu	37	6	49977033	49977033	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB110	245913	broad.mit.edu	37	6	49977033	49977033	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB112	245915	broad.mit.edu	37	6	50011302	50011302	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB112	245915	broad.mit.edu	37	6	50011302	50011302	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB112	245915	broad.mit.edu	37	6	50011302	50011302	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB119	245932	broad.mit.edu	37	20	29977160	29977160	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB119	245932	broad.mit.edu	37	20	29977160	29977160	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB119	245932	broad.mit.edu	37	20	29977160	29977160	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB126	81623	broad.mit.edu	37	20	126348	126348	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB126	81623	broad.mit.edu	37	20	126348	126348	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFB126	81623	broad.mit.edu	37	20	126348	126348	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126433706	126433706	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126641241	126641241	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126433706	126433706	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126641241	126641241	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126433706	126433706	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126641241	126641241	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4B	9909	broad.mit.edu	37	1	153905198	153905198	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND4B	9909	broad.mit.edu	37	1	153905198	153905198	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC7	91614	broad.mit.edu	37	11	33054339	33054339	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC7	91614	broad.mit.edu	37	11	33054339	33054339	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEPDC7	91614	broad.mit.edu	37	11	33054339	33054339	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB31	25861	broad.mit.edu	37	9	117166348	117166348	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB31	25861	broad.mit.edu	37	9	117228833	117228833	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB31	25861	broad.mit.edu	37	9	117166348	117166348	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB31	25861	broad.mit.edu	37	9	117228833	117228833	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DFNB31	25861	broad.mit.edu	37	9	117166348	117166348	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14797230	14797230	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14216490	14216490	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14797230	14797230	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14216490	14216490	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14797230	14797230	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKG	1608	broad.mit.edu	37	3	186015365	186015365	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKG	1608	broad.mit.edu	37	3	186015365	186015365	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKG	1608	broad.mit.edu	37	3	186015365	186015365	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137096788	137096788	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKI	9162	broad.mit.edu	37	7	137096788	137096788	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50146627	50146627	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50146627	50146627	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKK	139189	broad.mit.edu	37	X	50146627	50146627	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX35	60625	broad.mit.edu	37	20	37647546	37647546	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX35	60625	broad.mit.edu	37	20	37647546	37647546	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX35	60625	broad.mit.edu	37	20	37647546	37647546	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60545246	60545246	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60545246	60545246	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIAPH3	81624	broad.mit.edu	37	13	60555002	60555002	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DICER1	23405	broad.mit.edu	37	14	95573945	95573945	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80669342	80669342	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80669342	80669342	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIO2	1734	broad.mit.edu	37	14	80669342	80669342	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2B	57609	broad.mit.edu	37	12	51100220	51100220	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	409175	409175	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	409175	409175	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	409175	409175	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC3	729582	broad.mit.edu	37	2	218456007	218456007	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC3	729582	broad.mit.edu	37	2	218456007	218456007	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIRC3	729582	broad.mit.edu	37	2	218456007	218456007	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLL3	10683	broad.mit.edu	37	19	39989617	39989617	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLL3	10683	broad.mit.edu	37	19	39989617	39989617	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLL3	10683	broad.mit.edu	37	19	39989617	39989617	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMAP1	55929	broad.mit.edu	37	1	44680136	44680136	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMAP1	55929	broad.mit.edu	37	1	44680136	44680136	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTB1	63948	broad.mit.edu	37	1	53927080	53927080	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTB1	63948	broad.mit.edu	37	1	53927080	53927080	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMRTB1	63948	broad.mit.edu	37	1	53927080	53927080	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124325764	124325764	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124325764	124325764	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH10	196385	broad.mit.edu	37	12	124325764	124325764	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21599211	21599211	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21631013	21631013	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21599211	21599211	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21631013	21631013	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21599211	21599211	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21631013	21631013	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH14	127602	broad.mit.edu	37	1	225148114	225148114	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH14	127602	broad.mit.edu	37	1	225148114	225148114	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH14	127602	broad.mit.edu	37	1	225148114	225148114	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH17	8632	broad.mit.edu	37	17	76430021	76430024	+	Intron	DEL	GGAG	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21008588	21008588	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH3	55567	broad.mit.edu	37	16	21008588	21008588	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11726350	11726350	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11783613	11783613	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11726350	11726350	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11783613	11783613	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11840935	11840935	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11622751	11622751	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11726350	11726350	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11783613	11783613	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJB13	374407	broad.mit.edu	37	11	73669580	73669580	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC13	23317	broad.mit.edu	37	3	132196553	132196553	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC13	23317	broad.mit.edu	37	3	132196553	132196553	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC8	22826	broad.mit.edu	37	1	28528037	28528037	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAJC8	22826	broad.mit.edu	37	1	28528037	28528037	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNER	92737	broad.mit.edu	37	2	230341871	230341871	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNER	92737	broad.mit.edu	37	2	230341871	230341871	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNER	92737	broad.mit.edu	37	2	230341871	230341871	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMBP	23268	broad.mit.edu	37	10	101643712	101643712	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMBP	23268	broad.mit.edu	37	10	101643712	101643712	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNMBP	23268	broad.mit.edu	37	10	101643712	101643712	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225661642	225661642	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	63048786	63048786	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	63048786	63048786	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	63048786	63048786	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	304775	304775	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	304775	304775	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK8	81704	broad.mit.edu	37	9	304775	304775	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPF2	5977	broad.mit.edu	37	11	65109071	65109071	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116283454	116283454	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116283454	116283454	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116283454	116283454	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPRX	503834	broad.mit.edu	37	19	54135251	54135251	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPRX	503834	broad.mit.edu	37	19	54135266	54135266	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPRX	503834	broad.mit.edu	37	19	54135251	54135251	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPRX	503834	broad.mit.edu	37	19	54135266	54135266	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPRX	503834	broad.mit.edu	37	19	54135266	54135266	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL4	10570	broad.mit.edu	37	10	134006447	134006447	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPYSL4	10570	broad.mit.edu	37	10	134006447	134006447	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRAM2	128338	broad.mit.edu	37	1	111674256	111674256	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRAM2	128338	broad.mit.edu	37	1	111674256	111674256	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRAM2	128338	broad.mit.edu	37	1	111674256	111674256	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRP2	1821	broad.mit.edu	37	X	100486548	100486548	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRP2	1821	broad.mit.edu	37	X	100486548	100486548	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DRP2	1821	broad.mit.edu	37	X	100486548	100486548	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC2	1824	broad.mit.edu	37	18	28654570	28654570	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC2	1824	broad.mit.edu	37	18	28654614	28654614	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC2	1824	broad.mit.edu	37	18	28654570	28654570	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSC2	1824	broad.mit.edu	37	18	28654614	28654614	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117387251	117387251	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117387251	117387251	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117387251	117387251	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41725556	41725556	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41725556	41725556	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAM	1826	broad.mit.edu	37	21	41725556	41725556	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28934274	28934274	+	Nonsense_Mutation	SNP	C	A	A	rs146192657	byFrequency;by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28934274	28934274	+	Nonsense_Mutation	SNP	C	A	A	rs146192657	byFrequency;by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG1	1828	broad.mit.edu	37	18	28934274	28934274	+	Nonsense_Mutation	SNP	C	A	A	rs146192657	byFrequency;by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29040749	29040749	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29046538	29046538	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29040749	29040749	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29046538	29046538	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29040749	29040749	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSG3	1830	broad.mit.edu	37	18	29046538	29046538	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32446246	32446246	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNA	1837	broad.mit.edu	37	18	32446246	32446246	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNB	1838	broad.mit.edu	37	2	25606864	25606864	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNB	1838	broad.mit.edu	37	2	25606864	25606864	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTNB	1838	broad.mit.edu	37	2	25606864	25606864	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX3L	151636	broad.mit.edu	37	3	122288915	122288915	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX3L	151636	broad.mit.edu	37	3	122288915	122288915	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX3L	151636	broad.mit.edu	37	3	122288915	122288915	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX4	23220	broad.mit.edu	37	11	58956149	58956149	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX4	23220	broad.mit.edu	37	11	58956149	58956149	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DTX4	23220	broad.mit.edu	37	11	58956149	58956149	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX1	53905	broad.mit.edu	37	15	45444142	45444142	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX1	53905	broad.mit.edu	37	15	45444142	45444142	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUOX1	53905	broad.mit.edu	37	15	45444142	45444142	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP15	128853	broad.mit.edu	37	20	30454916	30454916	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP15	128853	broad.mit.edu	37	20	30454916	30454916	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	348110	348110	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DVL3	1857	broad.mit.edu	37	3	183882762	183882762	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DVL3	1857	broad.mit.edu	37	3	183882762	183882762	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102476788	102476788	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102476788	102476788	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1H1	1778	broad.mit.edu	37	14	102476788	102476788	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK4	8798	broad.mit.edu	37	12	4722693	4722693	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK4	8798	broad.mit.edu	37	12	4722693	4722693	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYRK4	8798	broad.mit.edu	37	12	4722693	4722693	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71730502	71730502	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71817456	71817456	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71730502	71730502	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71817456	71817456	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71730502	71730502	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71753317	71753317	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71817456	71817456	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158139080	158139080	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF1	1879	broad.mit.edu	37	5	158139080	158139080	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF2	64641	broad.mit.edu	37	8	25744284	25744284	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF2	64641	broad.mit.edu	37	8	25744284	25744284	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EBF2	64641	broad.mit.edu	37	8	25744284	25744284	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECE1	1889	broad.mit.edu	37	1	21548182	21548182	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECE1	1889	broad.mit.edu	37	1	21548182	21548182	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECE1	1889	broad.mit.edu	37	1	21548182	21548182	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECT2	1894	broad.mit.edu	37	3	172491841	172491841	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECT2	1894	broad.mit.edu	37	3	172491841	172491841	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ECT2	1894	broad.mit.edu	37	3	172491841	172491841	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA2R	60401	broad.mit.edu	37	X	65824892	65824892	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA2R	60401	broad.mit.edu	37	X	65824892	65824892	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA2R	60401	broad.mit.edu	37	X	65824892	65824892	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83239283	83239283	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83239283	83239283	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDIL3	10085	broad.mit.edu	37	5	83239283	83239283	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDN3	1908	broad.mit.edu	37	20	57876663	57876663	+	Missense_Mutation	SNP	C	A	A	rs142051051	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDN3	1908	broad.mit.edu	37	20	57876663	57876663	+	Missense_Mutation	SNP	C	A	A	rs142051051	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDN3	1908	broad.mit.edu	37	20	57876663	57876663	+	Missense_Mutation	SNP	C	A	A	rs142051051	byFrequency	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDNRA	1909	broad.mit.edu	37	4	148427647	148427647	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDNRA	1909	broad.mit.edu	37	4	148427647	148427647	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDNRA	1909	broad.mit.edu	37	4	148427647	148427647	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF2K	29904	broad.mit.edu	37	16	22291725	22291725	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF2K	29904	broad.mit.edu	37	16	22291725	22291725	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF2K	29904	broad.mit.edu	37	16	22237038	22237038	+	5'UTR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF2K	29904	broad.mit.edu	37	16	22291725	22291725	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFNA3	1944	broad.mit.edu	37	1	155058727	155058727	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFNA3	1944	broad.mit.edu	37	1	155058727	155058727	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD1	79631	broad.mit.edu	37	15	82532979	82532979	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFTUD1	79631	broad.mit.edu	37	15	82532979	82532979	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHD3	30845	broad.mit.edu	37	2	31483539	31483539	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT1	79813	broad.mit.edu	37	9	140672248	140672248	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EHMT1	79813	broad.mit.edu	37	9	140672248	140672248	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C3	192669	broad.mit.edu	37	1	36437711	36437711	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C3	192669	broad.mit.edu	37	1	36437711	36437711	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF2C3	192669	broad.mit.edu	37	1	36437711	36437711	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3IP1	442720	broad.mit.edu	37	7	109599680	109599680	+	3'UTR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A2	1974	broad.mit.edu	37	3	186505350	186505350	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A2	1974	broad.mit.edu	37	3	186505350	186505350	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4A2	1974	broad.mit.edu	37	3	186505350	186505350	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4B	1975	broad.mit.edu	37	12	53400188	53400188	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4B	1975	broad.mit.edu	37	12	53400188	53400188	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF4B	1975	broad.mit.edu	37	12	53400188	53400188	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF1	1997	broad.mit.edu	37	13	41507884	41507884	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF1	1997	broad.mit.edu	37	13	41507884	41507884	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF1	1997	broad.mit.edu	37	13	41507884	41507884	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF2	1998	broad.mit.edu	37	4	139988852	139988852	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF2	1998	broad.mit.edu	37	4	139988852	139988852	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF2	1998	broad.mit.edu	37	4	139980627	139980627	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF2	1998	broad.mit.edu	37	4	139988852	139988852	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL3	83401	broad.mit.edu	37	10	103988649	103988649	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL3	83401	broad.mit.edu	37	10	103988649	103988649	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL3	83401	broad.mit.edu	37	10	103988649	103988649	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELTD1	64123	broad.mit.edu	37	1	79402013	79402013	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELTD1	64123	broad.mit.edu	37	1	79402013	79402013	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELTD1	64123	broad.mit.edu	37	1	79402013	79402013	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMILIN2	84034	broad.mit.edu	37	18	2891215	2891215	+	Nonsense_Mutation	SNP	G	T	T	rs150535335	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMILIN2	84034	broad.mit.edu	37	18	2891215	2891215	+	Nonsense_Mutation	SNP	G	T	T	rs150535335	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMILIN2	84034	broad.mit.edu	37	18	2891215	2891215	+	Nonsense_Mutation	SNP	G	T	T	rs150535335	byFrequency	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAH	55740	broad.mit.edu	37	1	225699552	225699552	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAH	55740	broad.mit.edu	37	1	225699552	225699552	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENAH	55740	broad.mit.edu	37	1	225699552	225699552	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132147334	132147334	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132194288	132194288	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132147334	132147334	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132194288	132194288	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132147334	132147334	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP1	5167	broad.mit.edu	37	6	132194288	132194288	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENPP3	5169	broad.mit.edu	37	6	131962666	131962666	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENSA	2029	broad.mit.edu	37	1	150601402	150601402	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENSA	2029	broad.mit.edu	37	1	150601402	150601402	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD3	956	broad.mit.edu	37	3	40456138	40456138	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENY2	56943	broad.mit.edu	37	8	110348497	110348497	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5630369	5630369	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5630369	5630369	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L3	23136	broad.mit.edu	37	18	5630369	5630369	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41	2035	broad.mit.edu	37	1	29323866	29323866	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA10	284656	broad.mit.edu	37	1	38201007	38201007	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA10	284656	broad.mit.edu	37	1	38201007	38201007	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA4	2043	broad.mit.edu	37	2	222307444	222307444	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA4	2043	broad.mit.edu	37	2	222307444	222307444	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA4	2043	broad.mit.edu	37	2	222307444	222307444	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66230783	66230783	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66230783	66230783	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66230783	66230783	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96706434	96706434	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96706434	96706434	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA6	285220	broad.mit.edu	37	3	96706434	96706434	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93964397	93964397	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93964397	93964397	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	93964397	93964397	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22928016	22928016	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA8	2046	broad.mit.edu	37	1	22928016	22928016	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHX2	2053	broad.mit.edu	37	8	27379875	27379875	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHX2	2053	broad.mit.edu	37	8	27379875	27379875	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHX2	2053	broad.mit.edu	37	8	27379875	27379875	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPX	8288	broad.mit.edu	37	17	56270730	56270730	+	Splice_Site	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPX	8288	broad.mit.edu	37	17	56270730	56270730	+	Splice_Site	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPX	8288	broad.mit.edu	37	17	56270730	56270730	+	Splice_Site	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPYC	1833	broad.mit.edu	37	12	91358003	91358003	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPYC	1833	broad.mit.edu	37	12	91358003	91358003	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPYC	1833	broad.mit.edu	37	12	91358003	91358003	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERAP1	51752	broad.mit.edu	37	5	96121724	96121724	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERAP1	51752	broad.mit.edu	37	5	96121724	96121724	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERAP1	51752	broad.mit.edu	37	5	96121724	96121724	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37868208	37868208	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37868208	37868208	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB2	2064	broad.mit.edu	37	17	37868208	37868208	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERG	2078	broad.mit.edu	37	21	39775598	39775598	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERG	2078	broad.mit.edu	37	21	39947641	39947641	+	5'UTR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERG	2078	broad.mit.edu	37	21	39775598	39775598	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERG	2078	broad.mit.edu	37	21	39947641	39947641	+	5'UTR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERG	2078	broad.mit.edu	37	21	39775598	39775598	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERG	2078	broad.mit.edu	37	21	39947641	39947641	+	5'UTR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERI3	79033	broad.mit.edu	37	1	44820666	44820666	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERN2	10595	broad.mit.edu	37	16	23713521	23713521	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERN2	10595	broad.mit.edu	37	16	23713521	23713521	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERN2	10595	broad.mit.edu	37	16	23713521	23713521	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESR1	2099	broad.mit.edu	37	6	152265375	152265375	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESR1	2099	broad.mit.edu	37	6	152265375	152265375	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESR1	2099	broad.mit.edu	37	6	152265375	152265375	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ESR2	2100	broad.mit.edu	37	14	64699947	64699947	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVC	2121	broad.mit.edu	37	4	5730917	5730917	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVI5	7813	broad.mit.edu	37	1	93029339	93029339	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVI5	7813	broad.mit.edu	37	1	93029339	93029339	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVI5	7813	broad.mit.edu	37	1	93029339	93029339	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC5	10640	broad.mit.edu	37	14	57684713	57684713	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC5	10640	broad.mit.edu	37	14	57684713	57684713	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC5	10640	broad.mit.edu	37	14	57684713	57684713	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6	54536	broad.mit.edu	37	10	94594605	94594605	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6	54536	broad.mit.edu	37	10	94594605	94594605	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6	54536	broad.mit.edu	37	10	94594605	94594605	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC7	23265	broad.mit.edu	37	17	74099687	74099687	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC7	23265	broad.mit.edu	37	17	74099687	74099687	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT2	2132	broad.mit.edu	37	11	44228501	44228502	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT2	2132	broad.mit.edu	37	11	44228501	44228502	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXT2	2132	broad.mit.edu	37	11	44228501	44228502	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F10	2159	broad.mit.edu	37	13	113798162	113798162	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F10	2159	broad.mit.edu	37	13	113798162	113798162	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F12	2161	broad.mit.edu	37	5	176832265	176832265	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F12	2161	broad.mit.edu	37	5	176832265	176832265	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6318869	6318869	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6318869	6318869	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F13A1	2162	broad.mit.edu	37	6	6318869	6318869	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169551806	169551806	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169551806	169551806	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154157069	154157069	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154157069	154157069	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F8	2157	broad.mit.edu	37	X	154157069	154157069	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP1	2168	broad.mit.edu	37	2	88422658	88422658	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP1	2168	broad.mit.edu	37	2	88422658	88422658	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FABP1	2168	broad.mit.edu	37	2	88422658	88422658	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAF1	11124	broad.mit.edu	37	1	50941174	50941174	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120A	23196	broad.mit.edu	37	9	96320839	96320839	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120A	23196	broad.mit.edu	37	9	96320839	96320839	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM120A	23196	broad.mit.edu	37	9	96318676	96318676	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123A	219287	broad.mit.edu	37	13	25745640	25745640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123A	219287	broad.mit.edu	37	13	25745640	25745640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139161032	139161032	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139189684	139189684	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139207467	139207467	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139209901	139209901	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139189684	139189684	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139207467	139207467	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139209901	139209901	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139189684	139189684	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139207467	139207467	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139209901	139209901	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61023711	61023711	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61083903	61083903	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61023711	61023711	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61083903	61083903	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM13C	220965	broad.mit.edu	37	10	61083903	61083903	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM160A2	84067	broad.mit.edu	37	11	6240320	6240320	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM160A2	84067	broad.mit.edu	37	11	6240320	6240320	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM161A	84140	broad.mit.edu	37	2	62083841	62083841	+	5'Flank	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187608315	187608315	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187626258	187626258	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187608315	187608315	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187626258	187626258	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187608315	187608315	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187626258	187626258	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179A	165186	broad.mit.edu	37	2	29255791	29255791	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179A	165186	broad.mit.edu	37	2	29255791	29255791	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM183A	440585	broad.mit.edu	37	1	43613767	43613767	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM183A	440585	broad.mit.edu	37	1	43613767	43613767	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM183A	440585	broad.mit.edu	37	1	43613767	43613767	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A1	407738	broad.mit.edu	37	3	68055693	68055693	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A1	407738	broad.mit.edu	37	3	68055693	68055693	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A1	407738	broad.mit.edu	37	3	68055693	68055693	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A1	407738	broad.mit.edu	37	3	68241718	68241718	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A3	284467	broad.mit.edu	37	1	113266601	113266601	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A3	284467	broad.mit.edu	37	1	113266601	113266601	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A3	284467	broad.mit.edu	37	1	113266601	113266601	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37026967	37026967	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37027514	37027514	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37026967	37026967	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37027514	37027514	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37026967	37026967	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37027514	37027514	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM48B2	170067	broad.mit.edu	37	X	24330389	24330389	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM48B2	170067	broad.mit.edu	37	X	24330389	24330389	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM48B2	170067	broad.mit.edu	37	X	24330389	24330389	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067423	190067423	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190250721	190250721	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067423	190067423	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190250721	190250721	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190067423	190067423	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190250721	190250721	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	24843104	24843104	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	24843104	24843104	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM65B	9750	broad.mit.edu	37	6	24843104	24843104	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12232976	12232976	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12232976	12232976	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12232976	12232976	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71D	161142	broad.mit.edu	37	14	67675062	67675062	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71D	161142	broad.mit.edu	37	14	67675062	67675062	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71D	161142	broad.mit.edu	37	14	67675062	67675062	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM73B	84895	broad.mit.edu	37	9	131822938	131822938	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM73B	84895	broad.mit.edu	37	9	131822938	131822938	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702834	40702834	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702836	40702836	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702834	40702834	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702836	40702836	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702834	40702834	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A3	727830	broad.mit.edu	37	9	40702836	40702836	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83C	128876	broad.mit.edu	37	20	33876672	33876672	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83C	128876	broad.mit.edu	37	20	33876672	33876672	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM83C	128876	broad.mit.edu	37	20	33876672	33876672	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM92B	339145	broad.mit.edu	37	16	85139044	85139044	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM92B	339145	broad.mit.edu	37	16	85139044	85139044	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM92B	339145	broad.mit.edu	37	16	85139044	85139044	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM96A	84191	broad.mit.edu	37	15	64373466	64373466	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM96A	84191	broad.mit.edu	37	15	64373466	64373466	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10088407	10088410	+	Splice_Site	DEL	AGTA	-	-	rs146316187		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92531039	92531039	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92531039	92531039	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT3	120114	broad.mit.edu	37	11	92531039	92531039	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAU	2197	broad.mit.edu	37	11	64888835	64888835	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAU	2197	broad.mit.edu	37	11	64888835	64888835	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLIM1	54751	broad.mit.edu	37	1	16096939	16096939	+	Nonsense_Mutation	SNP	C	T	T	rs140794901		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBLIM1	54751	broad.mit.edu	37	1	16096939	16096939	+	Nonsense_Mutation	SNP	C	T	T	rs140794901		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127671921	127671921	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127671921	127671921	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127648343	127648343	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127671921	127671921	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO43	286151	broad.mit.edu	37	8	101153252	101153255	+	Frame_Shift_Del	DEL	TCTT	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCF1	51077	broad.mit.edu	37	14	75181614	75181614	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40433455	40433455	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40433455	40433455	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCGBP	8857	broad.mit.edu	37	19	40433455	40433455	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157556176	157556176	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157556176	157556176	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157556176	157556176	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLA	84824	broad.mit.edu	37	1	161680653	161680653	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLA	84824	broad.mit.edu	37	1	161680697	161680698	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLA	84824	broad.mit.edu	37	1	161680653	161680653	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLA	84824	broad.mit.edu	37	1	161680697	161680698	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLA	84824	broad.mit.edu	37	1	161680653	161680653	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRLA	84824	broad.mit.edu	37	1	161680697	161680698	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125109470	125109470	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125110055	125110055	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125113598	125113598	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125109470	125109470	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125110055	125110055	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125113598	125113598	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125109470	125109470	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125110055	125110055	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125113598	125113598	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGB	2244	broad.mit.edu	37	4	155490753	155490753	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGB	2244	broad.mit.edu	37	4	155490753	155490753	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGB	2244	broad.mit.edu	37	4	155490753	155490753	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHDC1	85462	broad.mit.edu	37	4	153889217	153889217	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHDC1	85462	broad.mit.edu	37	4	153889217	153889217	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHDC1	85462	broad.mit.edu	37	4	153889217	153889217	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL1	2273	broad.mit.edu	37	X	135288623	135288623	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL1	2273	broad.mit.edu	37	X	135288623	135288623	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL1	2273	broad.mit.edu	37	X	135288623	135288623	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL5	9457	broad.mit.edu	37	6	97063550	97063550	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL5	9457	broad.mit.edu	37	6	97063550	97063550	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHL5	9457	broad.mit.edu	37	6	97063550	97063550	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152285480	152285480	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152285480	152285480	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLG	2312	broad.mit.edu	37	1	152285480	152285480	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ40330	645784	broad.mit.edu	37	2	89082293	89082294	+	Intron	INS	-	ATTT	ATTT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43860	389690	broad.mit.edu	37	8	142506699	142506699	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLJ43860	389690	broad.mit.edu	37	8	142506699	142506699	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28602308	28602308	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28602308	28602308	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240306301	240306301	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240306301	240306301	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240306301	240306301	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP4	23360	broad.mit.edu	37	11	47776187	47776187	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP4	23360	broad.mit.edu	37	11	47776187	47776187	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FNBP4	23360	broad.mit.edu	37	11	47776187	47776187	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89413711	89413711	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLH1B	219595	broad.mit.edu	37	11	89424600	89424600	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLR2	2350	broad.mit.edu	37	11	71929838	71929838	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLR2	2350	broad.mit.edu	37	11	71929838	71929838	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOLR2	2350	broad.mit.edu	37	11	71929838	71929838	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXC2	2303	broad.mit.edu	37	16	86602482	86602482	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXC2	2303	broad.mit.edu	37	16	86602482	86602482	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXD4L1	200350	broad.mit.edu	37	2	114257955	114257955	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXD4L1	200350	broad.mit.edu	37	2	114257955	114257955	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXD4L1	200350	broad.mit.edu	37	2	114257955	114257955	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXN3	1112	broad.mit.edu	37	14	89878659	89878659	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRAS1	80144	broad.mit.edu	37	4	79367972	79367972	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14784421	14784421	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14784421	14784421	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FREM1	158326	broad.mit.edu	37	9	14784421	14784421	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD1	79981	broad.mit.edu	37	6	168463475	168463475	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4B	23150	broad.mit.edu	37	3	69360560	69360560	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4B	23150	broad.mit.edu	37	3	69360560	69360560	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD4B	23150	broad.mit.edu	37	3	69360560	69360560	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131227988	131227988	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131227988	131227988	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD7	90167	broad.mit.edu	37	X	131227988	131227988	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49444598	49444598	+	Splice_Site	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49444598	49444598	+	Splice_Site	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49444598	49444598	+	Splice_Site	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD2	143162	broad.mit.edu	37	10	49450216	49450216	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12516994	12516994	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12516994	12516994	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12516994	12516994	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48592645	48592645	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48592645	48592645	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRYL	285527	broad.mit.edu	37	4	48592645	48592645	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32811626	32811626	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32811626	32811626	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRY	10129	broad.mit.edu	37	13	32811626	32811626	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49210404	49210404	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSHR	2492	broad.mit.edu	37	2	49210404	49210404	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL1	11167	broad.mit.edu	37	3	120130654	120130654	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FSTL5	56884	broad.mit.edu	37	4	162954855	162954855	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTCD	10841	broad.mit.edu	37	21	47556896	47556896	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTCD	10841	broad.mit.edu	37	21	47556896	47556896	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61901977	61901977	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61901977	61901977	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTSJ3	117246	broad.mit.edu	37	17	61901977	61901977	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT8	2530	broad.mit.edu	37	14	66135974	66135974	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT8	2530	broad.mit.edu	37	14	66135974	66135974	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FUT8	2530	broad.mit.edu	37	14	66135974	66135974	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD6	53826	broad.mit.edu	37	11	117711951	117711951	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD6	53826	broad.mit.edu	37	11	117711951	117711951	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD6	53826	broad.mit.edu	37	11	117711951	117711951	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39130755	39130755	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYB	2533	broad.mit.edu	37	5	39130755	39130755	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYCO1	79443	broad.mit.edu	37	3	46021226	46021226	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYCO1	79443	broad.mit.edu	37	3	46021226	46021226	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYCO1	79443	broad.mit.edu	37	3	46021226	46021226	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYN	2534	broad.mit.edu	37	6	112020599	112020599	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYN	2534	broad.mit.edu	37	6	112020599	112020599	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FYN	2534	broad.mit.edu	37	6	112020599	112020599	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G2E3	55632	broad.mit.edu	37	14	31077153	31077153	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G2E3	55632	broad.mit.edu	37	14	31077153	31077153	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
G2E3	55632	broad.mit.edu	37	14	31077153	31077153	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17451135	17451135	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17451135	17451135	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAB4	128954	broad.mit.edu	37	22	17451135	17451135	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABBR2	9568	broad.mit.edu	37	9	101370373	101370373	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46334591	46334591	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46334591	46334591	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA2	2555	broad.mit.edu	37	4	46334591	46334591	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRA3	2556	broad.mit.edu	37	X	151533050	151533050	+	5'UTR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47427876	47427876	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47427876	47427876	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47427876	47427876	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRE	2564	broad.mit.edu	37	X	151131077	151131077	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRE	2564	broad.mit.edu	37	X	151131077	151131077	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRE	2564	broad.mit.edu	37	X	151131077	151131077	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG3	2567	broad.mit.edu	37	15	27453678	27453678	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR1	2569	broad.mit.edu	37	6	89895078	89895078	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR1	2569	broad.mit.edu	37	6	89895078	89895078	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRR1	2569	broad.mit.edu	37	6	89895078	89895078	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAGE1	2543	broad.mit.edu	37	X	49369851	49369851	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAGE1	2543	broad.mit.edu	37	X	49369851	49369851	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAGE1	2543	broad.mit.edu	37	X	49369851	49369851	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAK	2580	broad.mit.edu	37	4	882787	882787	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAK	2580	broad.mit.edu	37	4	905514	905514	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAK	2580	broad.mit.edu	37	4	882787	882787	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAK	2580	broad.mit.edu	37	4	905514	905514	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAK	2580	broad.mit.edu	37	4	905514	905514	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88407816	88407816	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88407816	88407816	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALC	2581	broad.mit.edu	37	14	88407816	88407816	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31135331	31135331	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31135331	31135331	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT14	79623	broad.mit.edu	37	2	31135331	31135331	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT3	2591	broad.mit.edu	37	2	166606398	166606398	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173803857	173803857	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173803857	173803857	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNTL6	442117	broad.mit.edu	37	4	173803857	173803857	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62398602	62398602	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62398602	62398602	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GANAB	23193	broad.mit.edu	37	11	62398602	62398602	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130073925	130073925	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130101923	130101923	+	Splice_Site	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130073925	130073925	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130101923	130101923	+	Splice_Site	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130073925	130073925	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GARNL3	84253	broad.mit.edu	37	9	130101923	130101923	+	Splice_Site	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2	2620	broad.mit.edu	37	11	22707259	22707259	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2	2620	broad.mit.edu	37	11	22707259	22707259	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2	2620	broad.mit.edu	37	11	22707259	22707259	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBP1	2633	broad.mit.edu	37	1	89523812	89523812	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GC	2638	broad.mit.edu	37	4	72618403	72618403	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GC	2638	broad.mit.edu	37	4	72618403	72618403	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GC	2638	broad.mit.edu	37	4	72618403	72618403	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDNF	2668	broad.mit.edu	37	5	37815930	37815930	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDNF	2668	broad.mit.edu	37	5	37815930	37815930	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDNF	2668	broad.mit.edu	37	5	37815930	37815930	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD4	220032	broad.mit.edu	37	11	76990496	76990496	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDPD4	220032	broad.mit.edu	37	11	76990496	76990496	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GH1	2688	broad.mit.edu	37	17	61995316	61995316	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GH1	2688	broad.mit.edu	37	17	61995316	61995316	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIF	2694	broad.mit.edu	37	11	59610487	59610487	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIF	2694	broad.mit.edu	37	11	59610487	59610487	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIF	2694	broad.mit.edu	37	11	59610487	59610487	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIPC1	10755	broad.mit.edu	37	19	14591629	14591629	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIPC1	10755	broad.mit.edu	37	19	14591629	14591629	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIPR	2696	broad.mit.edu	37	19	46181126	46181126	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIPR	2696	broad.mit.edu	37	19	46181126	46181126	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GIPR	2696	broad.mit.edu	37	19	46181126	46181126	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJB1	2705	broad.mit.edu	37	X	70443680	70443680	+	Missense_Mutation	SNP	G	T	T	rs116840816		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJB1	2705	broad.mit.edu	37	X	70443680	70443680	+	Missense_Mutation	SNP	G	T	T	rs116840816		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJB1	2705	broad.mit.edu	37	X	70443680	70443680	+	Missense_Mutation	SNP	G	T	T	rs116840816		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134239735	134239735	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6534776	6534776	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6589151	6589151	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6534776	6534776	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6589151	6589151	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6534776	6534776	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLDC	2731	broad.mit.edu	37	9	6589151	6589151	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP1R	2740	broad.mit.edu	37	6	39046706	39046706	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP1R	2740	broad.mit.edu	37	6	39046706	39046706	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP1R	2740	broad.mit.edu	37	6	39046706	39046706	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP2R	9340	broad.mit.edu	37	17	9756594	9756594	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLP2R	9340	broad.mit.edu	37	17	9756594	9756594	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRX3	10539	broad.mit.edu	37	10	131958334	131958334	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRX3	10539	broad.mit.edu	37	10	131958334	131958334	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRX3	10539	broad.mit.edu	37	10	131958334	131958334	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMEB1	10691	broad.mit.edu	37	1	29041146	29041146	+	Missense_Mutation	SNP	C	T	T	rs148243859		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMEB1	10691	broad.mit.edu	37	1	29041146	29041146	+	Missense_Mutation	SNP	C	T	T	rs148243859		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMEB1	10691	broad.mit.edu	37	1	29041146	29041146	+	Missense_Mutation	SNP	C	T	T	rs148243859		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPPA	29926	broad.mit.edu	37	2	220366108	220366108	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPPA	29926	broad.mit.edu	37	2	220366108	220366108	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMPPA	29926	broad.mit.edu	37	2	220366108	220366108	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAQ	2776	broad.mit.edu	37	9	80537207	80537207	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAQ	2776	broad.mit.edu	37	9	80537207	80537207	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAQ	2776	broad.mit.edu	37	9	80537207	80537207	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNL1	2794	broad.mit.edu	37	6	30520221	30520221	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNL1	2794	broad.mit.edu	37	6	30520221	30520221	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNL1	2794	broad.mit.edu	37	6	30520221	30520221	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC5	2262	broad.mit.edu	37	13	92101100	92101100	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC5	2262	broad.mit.edu	37	13	92101100	92101100	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC5	2262	broad.mit.edu	37	13	92101100	92101100	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPC6	10082	broad.mit.edu	37	13	94047718	94047718	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPD2	2820	broad.mit.edu	37	2	157426764	157426764	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPI	2821	broad.mit.edu	37	19	34890734	34890734	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPI	2821	broad.mit.edu	37	19	34890734	34890734	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPI	2821	broad.mit.edu	37	19	34890734	34890734	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135429796	135429796	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135429796	135429796	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135429796	135429796	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR132	29933	broad.mit.edu	37	14	105518393	105518393	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR132	29933	broad.mit.edu	37	14	105518393	105518393	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR132	29933	broad.mit.edu	37	14	105518393	105518393	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR139	124274	broad.mit.edu	37	16	20043655	20043655	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR139	124274	broad.mit.edu	37	16	20043655	20043655	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR139	124274	broad.mit.edu	37	16	20043655	20043655	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR141	353345	broad.mit.edu	37	7	37780650	37780650	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR141	353345	broad.mit.edu	37	7	37780650	37780650	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR141	353345	broad.mit.edu	37	7	37780650	37780650	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR37	2861	broad.mit.edu	37	7	124386577	124386577	+	3'UTR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR37	2861	broad.mit.edu	37	7	124386577	124386577	+	3'UTR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR37	2861	broad.mit.edu	37	7	124386577	124386577	+	3'UTR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR39	2863	broad.mit.edu	37	2	133174584	133174584	+	5'UTR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR39	2863	broad.mit.edu	37	2	133174584	133174584	+	5'UTR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR39	2863	broad.mit.edu	37	2	133174584	133174584	+	5'UTR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR63	81491	broad.mit.edu	37	6	97246908	97246908	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR63	81491	broad.mit.edu	37	6	97247592	97247592	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR63	81491	broad.mit.edu	37	6	97246908	97246908	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR63	81491	broad.mit.edu	37	6	97247592	97247592	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR63	81491	broad.mit.edu	37	6	97246908	97246908	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR63	81491	broad.mit.edu	37	6	97247592	97247592	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	89986703	89986703	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	89986703	89986703	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR98	84059	broad.mit.edu	37	5	89986703	89986703	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11736151	11736151	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREB1	9687	broad.mit.edu	37	2	11736151	11736151	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105804494	105804494	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105804494	105804494	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIA4	2893	broad.mit.edu	37	11	105804494	105804494	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87628799	87628799	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87628799	87628799	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID1	2894	broad.mit.edu	37	10	87628799	87628799	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	93511469	93511469	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94690278	94690278	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	93511469	93511469	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94690278	94690278	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	93511469	93511469	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRID2	2895	broad.mit.edu	37	4	94690278	94690278	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK1	2897	broad.mit.edu	37	21	31045289	31045290	+	Intron	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK1	2897	broad.mit.edu	37	21	31045289	31045290	+	Intron	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK1	2897	broad.mit.edu	37	21	31045289	31045290	+	Intron	DNP	CC	AA	AA			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	101878314	101878314	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	101878314	101878314	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37338048	37338048	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37338048	37338048	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK3	2899	broad.mit.edu	37	1	37338048	37338048	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2D	2906	broad.mit.edu	37	19	48945446	48945446	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2D	2906	broad.mit.edu	37	19	48945446	48945446	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN2D	2906	broad.mit.edu	37	19	48945446	48945446	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3006137	3006137	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3006137	3006137	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK4	2868	broad.mit.edu	37	4	3006137	3006137	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK5	2869	broad.mit.edu	37	10	121072548	121072550	+	Intron	DEL	TGA	-	-	rs142527759	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK5	2869	broad.mit.edu	37	10	121190064	121190064	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRK5	2869	broad.mit.edu	37	10	121190064	121190064	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM3	2913	broad.mit.edu	37	7	86415735	86415735	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM3	2913	broad.mit.edu	37	7	86415735	86415735	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM3	2913	broad.mit.edu	37	7	86415735	86415735	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM5	2915	broad.mit.edu	37	11	88386667	88386667	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM5	2915	broad.mit.edu	37	11	88386667	88386667	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126173069	126173069	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126173340	126173340	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126173069	126173069	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126173340	126173340	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126173069	126173069	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126173340	126173340	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM8	2918	broad.mit.edu	37	7	126173694	126173694	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA1	2938	broad.mit.edu	37	6	52663830	52663830	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA1	2938	broad.mit.edu	37	6	52663830	52663830	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTA4	2941	broad.mit.edu	37	6	52858889	52858889	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM4	2948	broad.mit.edu	37	1	110200050	110200050	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM4	2948	broad.mit.edu	37	1	110200050	110200050	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM5	2949	broad.mit.edu	37	1	110257934	110257934	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSTM5	2949	broad.mit.edu	37	1	110257934	110257934	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27540011	27540011	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP10	85865	broad.mit.edu	37	7	89975866	89975866	+	5'Flank	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP10	85865	broad.mit.edu	37	7	89975866	89975866	+	5'Flank	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP3	84705	broad.mit.edu	37	19	17448878	17448878	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTPBP3	84705	broad.mit.edu	37	19	17448878	17448878	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCA1C	9626	broad.mit.edu	37	3	108627169	108627169	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A2	2977	broad.mit.edu	37	11	106888445	106888445	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY1A2	2977	broad.mit.edu	37	11	106888445	106888445	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108628501	108628501	+	Silent	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUCY2F	2986	broad.mit.edu	37	X	108652429	108652429	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GUSB	2990	broad.mit.edu	37	7	65425806	65425806	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPA	2993	broad.mit.edu	37	4	145038156	145038157	+	Intron	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GYPA	2993	broad.mit.edu	37	4	145038156	145038157	+	Intron	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GZMH	2999	broad.mit.edu	37	14	25075914	25075914	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GZMH	2999	broad.mit.edu	37	14	25075914	25075914	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAAO	23498	broad.mit.edu	37	2	42996759	42996759	+	Intron	SNP	A	G	G	rs144715187	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAS2	3037	broad.mit.edu	37	8	122626343	122626343	+	3'UTR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAS2	3037	broad.mit.edu	37	8	122626343	122626343	+	3'UTR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAS2	3037	broad.mit.edu	37	8	122626343	122626343	+	3'UTR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HAS2	3037	broad.mit.edu	37	8	122641133	122641133	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBE1	3046	broad.mit.edu	37	11	5291184	5291185	+	5'UTR	DEL	CT	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBE1	3046	broad.mit.edu	37	11	5291184	5291185	+	5'UTR	DEL	CT	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HBE1	3046	broad.mit.edu	37	11	5291184	5291185	+	5'UTR	DEL	CT	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45396927	45396927	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCN1	348980	broad.mit.edu	37	5	45396927	45396927	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC2	3066	broad.mit.edu	37	6	114270215	114270215	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC2	3066	broad.mit.edu	37	6	114270215	114270215	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC2	3066	broad.mit.edu	37	6	114270215	114270215	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC3	8841	broad.mit.edu	37	5	141005722	141005722	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC3	8841	broad.mit.edu	37	5	141005722	141005722	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC3	8841	broad.mit.edu	37	5	141005722	141005722	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	240066294	240066294	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	240066294	240066294	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	240066294	240066294	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC7	51564	broad.mit.edu	37	12	48196167	48196167	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDGF	3068	broad.mit.edu	37	1	156721086	156721086	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDGF	3068	broad.mit.edu	37	1	156721086	156721086	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDHD1A	8226	broad.mit.edu	37	X	6995465	6995465	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDHD1A	8226	broad.mit.edu	37	X	6995465	6995465	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDHD1A	8226	broad.mit.edu	37	X	6995465	6995465	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5A	25938	broad.mit.edu	37	14	31778370	31778370	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5A	25938	broad.mit.edu	37	14	31778370	31778370	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR5A	25938	broad.mit.edu	37	14	31778370	31778370	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7A	727957	broad.mit.edu	37	8	145245886	145245886	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7A	727957	broad.mit.edu	37	8	145245886	145245886	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEBP2	23593	broad.mit.edu	37	6	138727307	138727307	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEBP2	23593	broad.mit.edu	37	6	138727307	138727307	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEBP2	23593	broad.mit.edu	37	6	138727307	138727307	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43283518	43283518	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECW1	23072	broad.mit.edu	37	7	43283518	43283518	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEMGN	55363	broad.mit.edu	37	9	100693342	100693342	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEMGN	55363	broad.mit.edu	37	9	100693342	100693342	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEMGN	55363	broad.mit.edu	37	9	100693342	100693342	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPHL1	341208	broad.mit.edu	37	11	93821930	93821930	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65409397	65409397	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65417580	65417580	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65417580	65417580	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65409397	65409397	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65417580	65417580	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2P4	440362	broad.mit.edu	37	16	32164277	32164277	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2P4	440362	broad.mit.edu	37	16	32164277	32164277	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2P4	440362	broad.mit.edu	37	16	32164277	32164277	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HES2	54626	broad.mit.edu	37	1	6479306	6479306	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HES2	54626	broad.mit.edu	37	1	6479306	6479306	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFE	3077	broad.mit.edu	37	6	26093224	26093224	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91794385	91794385	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91794385	91794385	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91794385	91794385	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFM1	164045	broad.mit.edu	37	1	91794571	91794571	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHATL	57467	broad.mit.edu	37	3	42738369	42738369	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHATL	57467	broad.mit.edu	37	3	42738369	42738369	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHATL	57467	broad.mit.edu	37	3	42738369	42738369	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HHIPL1	84439	broad.mit.edu	37	14	100123116	100123118	+	Intron	DEL	AAG	-	-	rs35577018		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75221302	75221302	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75221302	75221302	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIP1	3092	broad.mit.edu	37	7	75221302	75221302	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AC	8334	broad.mit.edu	37	6	26124161	26124161	+	5'Flank	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AC	8334	broad.mit.edu	37	6	26124161	26124161	+	5'Flank	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H2AC	8334	broad.mit.edu	37	6	26124161	26124161	+	5'Flank	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BE	8349	broad.mit.edu	37	1	149858222	149858222	+	5'UTR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BE	8349	broad.mit.edu	37	1	149858222	149858222	+	5'UTR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST2H2BE	8349	broad.mit.edu	37	1	149858222	149858222	+	5'UTR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HJURP	55355	broad.mit.edu	37	2	234762655	234762655	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HJURP	55355	broad.mit.edu	37	2	234762655	234762655	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLA-DPA1	3113	broad.mit.edu	37	6	33036447	33036447	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLCS	3141	broad.mit.edu	37	21	38139633	38139633	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLCS	3141	broad.mit.edu	37	21	38139633	38139633	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLCS	3141	broad.mit.edu	37	21	38139633	38139633	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148777447	148777447	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HLTF	6596	broad.mit.edu	37	3	148777447	148777447	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185892747	185892747	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186107158	186107158	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186114769	186114769	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185892747	185892747	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186107158	186107158	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186114769	186114769	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	185892747	185892747	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186083064	186083064	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMCN1	83872	broad.mit.edu	37	1	186114769	186114769	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4G	3174	broad.mit.edu	37	8	76456309	76456309	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4G	3174	broad.mit.edu	37	8	76472700	76472700	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4G	3174	broad.mit.edu	37	8	76456309	76456309	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4G	3174	broad.mit.edu	37	8	76472700	76472700	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4G	3174	broad.mit.edu	37	8	76456309	76456309	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNF4G	3174	broad.mit.edu	37	8	76472700	76472700	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA2B1	3181	broad.mit.edu	37	7	26240186	26240186	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA2B1	3181	broad.mit.edu	37	7	26240186	26240186	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA2B1	3181	broad.mit.edu	37	7	26240186	26240186	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA3P1	10151	broad.mit.edu	37	10	44285232	44285232	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA3P1	10151	broad.mit.edu	37	10	44285232	44285232	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPA3P1	10151	broad.mit.edu	37	10	44285232	44285232	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPD	3184	broad.mit.edu	37	4	83278025	83278025	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HNRNPD	3184	broad.mit.edu	37	4	83278025	83278025	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOMER2	9455	broad.mit.edu	37	15	83543936	83543936	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOMER2	9455	broad.mit.edu	37	15	83543936	83543936	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOMER2	9455	broad.mit.edu	37	15	83543936	83543936	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA1	3198	broad.mit.edu	37	7	27135327	27135327	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA1	3198	broad.mit.edu	37	7	27135327	27135327	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA1	3198	broad.mit.edu	37	7	27135327	27135327	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA2	3199	broad.mit.edu	37	7	27140626	27140626	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA2	3199	broad.mit.edu	37	7	27140626	27140626	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA2	3199	broad.mit.edu	37	7	27140626	27140626	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA3	3200	broad.mit.edu	37	7	27147954	27147954	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA3	3200	broad.mit.edu	37	7	27147954	27147954	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA7	3204	broad.mit.edu	37	7	27196029	27196029	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA7	3204	broad.mit.edu	37	7	27196029	27196029	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA7	3204	broad.mit.edu	37	7	27196029	27196029	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB13	10481	broad.mit.edu	37	17	46805162	46805162	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB13	10481	broad.mit.edu	37	17	46805162	46805162	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXC8	3224	broad.mit.edu	37	12	54403672	54403672	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HP1BP3	50809	broad.mit.edu	37	1	21074085	21074086	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HP1BP3	50809	broad.mit.edu	37	1	21074085	21074086	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HP1BP3	50809	broad.mit.edu	37	1	21074085	21074086	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18316470	18316470	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18316470	18316470	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18316470	18316470	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPS5	11234	broad.mit.edu	37	11	18326936	18326937	+	Intron	INS	-	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPSE	10855	broad.mit.edu	37	4	84240262	84240262	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPX	3263	broad.mit.edu	37	11	6452734	6452734	+	Intron	SNP	C	A	A	rs34901281		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPX	3263	broad.mit.edu	37	11	6452734	6452734	+	Intron	SNP	C	A	A	rs34901281		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HPX	3263	broad.mit.edu	37	11	6452734	6452734	+	Intron	SNP	C	A	A	rs34901281		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSD11B1	3290	broad.mit.edu	37	1	209878479	209878479	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA12A	259217	broad.mit.edu	37	10	118439004	118439004	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA12A	259217	broad.mit.edu	37	10	118460771	118460771	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA12A	259217	broad.mit.edu	37	10	118439004	118439004	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA12A	259217	broad.mit.edu	37	10	118460771	118460771	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPA12A	259217	broad.mit.edu	37	10	118439004	118439004	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPH1	10808	broad.mit.edu	37	13	31713001	31713001	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPH1	10808	broad.mit.edu	37	13	31713001	31713001	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPH1	10808	broad.mit.edu	37	13	31712417	31712417	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPH1	10808	broad.mit.edu	37	13	31713001	31713001	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114082456	114082456	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR2C	3358	broad.mit.edu	37	X	114082456	114082456	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70897063	70897063	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70908208	70908208	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70908693	70908693	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71103063	71103063	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71220572	71220572	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70897063	70897063	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70908208	70908208	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70908693	70908693	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71103063	71103063	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71220572	71220572	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70897063	70897063	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70908208	70908208	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	70908693	70908693	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71103063	71103063	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HYDIN	54768	broad.mit.edu	37	16	71220572	71220572	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IARS2	55699	broad.mit.edu	37	1	220315369	220315369	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICOSLG	23308	broad.mit.edu	37	21	45651051	45651051	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ICOSLG	23308	broad.mit.edu	37	21	45651051	45651051	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA2	3440	broad.mit.edu	37	9	21384955	21384955	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFNA2	3440	broad.mit.edu	37	9	21384955	21384955	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFRD2	7866	broad.mit.edu	37	3	50327585	50327585	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFRD2	7866	broad.mit.edu	37	3	50327585	50327585	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT74	80173	broad.mit.edu	37	9	27011886	27011886	+	Intron	DEL	T	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT80	57560	broad.mit.edu	37	3	159998598	159998598	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT80	57560	broad.mit.edu	37	3	159998598	159998598	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT80	57560	broad.mit.edu	37	3	159998598	159998598	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP1	3484	broad.mit.edu	37	7	45932543	45932543	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP1	3484	broad.mit.edu	37	7	45932543	45932543	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBP1	3484	broad.mit.edu	37	7	45932543	45932543	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBPL1	347252	broad.mit.edu	37	9	38414155	38414155	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBPL1	347252	broad.mit.edu	37	9	38414155	38414155	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGFBPL1	347252	broad.mit.edu	37	9	38414155	38414155	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGHMBP2	3508	broad.mit.edu	37	11	68696885	68696885	+	Intron	SNP	G	T	T	rs118002016	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGHMBP2	3508	broad.mit.edu	37	11	68696885	68696885	+	Intron	SNP	G	T	T	rs118002016	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGLON5	402665	broad.mit.edu	37	19	51828677	51828677	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGLON5	402665	broad.mit.edu	37	19	51828677	51828677	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGLON5	402665	broad.mit.edu	37	19	51828677	51828677	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151164627	151164627	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151154859	151154859	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151164627	151164627	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151154859	151154859	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF10	285313	broad.mit.edu	37	3	151164627	151164627	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18745667	18745667	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18745667	18745667	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF22	283284	broad.mit.edu	37	11	18745667	18745667	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF5	150084	broad.mit.edu	37	21	41137527	41137527	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF5	150084	broad.mit.edu	37	21	41137527	41137527	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF5	150084	broad.mit.edu	37	21	41137527	41137527	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF8	93185	broad.mit.edu	37	1	160063200	160063200	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF8	93185	broad.mit.edu	37	1	160063200	160063200	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF8	93185	broad.mit.edu	37	1	160063200	160063200	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKAP	8518	broad.mit.edu	37	9	111673503	111673503	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKAP	8518	broad.mit.edu	37	9	111673503	111673503	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IKBKAP	8518	broad.mit.edu	37	9	111673503	111673503	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL17F	112744	broad.mit.edu	37	6	52109223	52109223	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL25	64806	broad.mit.edu	37	14	23842476	23842476	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL25	64806	broad.mit.edu	37	14	23842476	23842476	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL27RA	9466	broad.mit.edu	37	19	14153294	14153294	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL27RA	9466	broad.mit.edu	37	19	14153294	14153294	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL27RA	9466	broad.mit.edu	37	19	14153294	14153294	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL5RA	3568	broad.mit.edu	37	3	3131894	3131894	+	Intron	SNP	G	T	T	rs140525458	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL5RA	3568	broad.mit.edu	37	3	3131894	3131894	+	Intron	SNP	G	T	T	rs140525458	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL5RA	3568	broad.mit.edu	37	3	3131894	3131894	+	Intron	SNP	G	T	T	rs140525458	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7	3574	broad.mit.edu	37	8	79673608	79673608	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7	3574	broad.mit.edu	37	8	79673608	79673608	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7	3574	broad.mit.edu	37	8	79673608	79673608	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ILF3	3609	broad.mit.edu	37	19	10793909	10793909	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBE	83729	broad.mit.edu	37	12	57850768	57850768	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBE	83729	broad.mit.edu	37	12	57850768	57850768	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15243085	15243085	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15243085	15243085	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15243085	15243085	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSL5	10022	broad.mit.edu	37	1	67266839	67266839	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSL5	10022	broad.mit.edu	37	1	67266839	67266839	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSL5	10022	broad.mit.edu	37	1	67266839	67266839	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS1	26173	broad.mit.edu	37	7	1519028	1519028	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS2	57508	broad.mit.edu	37	17	59962347	59962347	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS2	57508	broad.mit.edu	37	17	59962347	59962347	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS2	57508	broad.mit.edu	37	17	59962347	59962347	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4L1	285905	broad.mit.edu	37	7	64662889	64662889	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4L1	285905	broad.mit.edu	37	7	64662910	64662910	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4L1	285905	broad.mit.edu	37	7	64662889	64662889	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4L1	285905	broad.mit.edu	37	7	64662910	64662910	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4L1	285905	broad.mit.edu	37	7	64662889	64662889	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4L1	285905	broad.mit.edu	37	7	64662910	64662910	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS5	80789	broad.mit.edu	37	11	62415826	62415826	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS5	80789	broad.mit.edu	37	11	62415826	62415826	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTU	27152	broad.mit.edu	37	4	128632153	128632153	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTU	27152	broad.mit.edu	37	4	128632153	128632153	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTU	27152	broad.mit.edu	37	4	128632153	128632153	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30783888	30783888	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30837234	30837234	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30783888	30783888	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30837234	30837234	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30783888	30783888	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO8	10526	broad.mit.edu	37	12	30837234	30837234	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCK	124152	broad.mit.edu	37	16	19830882	19830882	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75757446	75757446	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75918958	75918958	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75757446	75757446	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75918958	75918958	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75757446	75757446	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP2	10788	broad.mit.edu	37	5	75918958	75918958	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156507150	156507150	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156507150	156507150	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQGAP3	128239	broad.mit.edu	37	1	156507150	156507150	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF3	3661	broad.mit.edu	37	19	50163052	50163052	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF4	3662	broad.mit.edu	37	6	396691	396691	+	Intron	SNP	C	A	A	rs3866820		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISLR	3671	broad.mit.edu	37	15	74467708	74467708	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISLR	3671	broad.mit.edu	37	15	74467708	74467708	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISLR	3671	broad.mit.edu	37	15	74467708	74467708	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISM2	145501	broad.mit.edu	37	14	77948569	77948569	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISM2	145501	broad.mit.edu	37	14	77948569	77948569	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISOC1	51015	broad.mit.edu	37	5	128440942	128440942	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISOC1	51015	broad.mit.edu	37	5	128440942	128440942	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ISOC1	51015	broad.mit.edu	37	5	128440942	128440942	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2B	3674	broad.mit.edu	37	17	42455747	42455747	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2B	3674	broad.mit.edu	37	17	42455747	42455747	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA2B	3674	broad.mit.edu	37	17	42455747	42455747	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31422034	31422034	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31422034	31422034	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31422034	31422034	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31383687	31383687	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31383687	31383687	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAX	3687	broad.mit.edu	37	16	31383687	31383687	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP3	27231	broad.mit.edu	37	19	3939950	3939950	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP3	27231	broad.mit.edu	37	19	3939950	3939950	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP3	27231	broad.mit.edu	37	19	3939950	3939950	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB3	3690	broad.mit.edu	37	17	45366890	45366890	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB4	3691	broad.mit.edu	37	17	73724342	73724342	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB4	3691	broad.mit.edu	37	17	73724342	73724342	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB5	3693	broad.mit.edu	37	3	124538552	124538552	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB5	3693	broad.mit.edu	37	3	124538552	124538552	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB5	3693	broad.mit.edu	37	3	124538552	124538552	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH1	3697	broad.mit.edu	37	3	52818397	52818397	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH1	3697	broad.mit.edu	37	3	52818397	52818397	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH1	3697	broad.mit.edu	37	3	52818397	52818397	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7763676	7763676	+	Missense_Mutation	SNP	C	T	T	rs141514196		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7773794	7773794	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7763676	7763676	+	Missense_Mutation	SNP	C	T	T	rs141514196		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7773794	7773794	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7763676	7763676	+	Missense_Mutation	SNP	C	T	T	rs141514196		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITIH2	3698	broad.mit.edu	37	10	7773794	7773794	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24426444	24426444	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24426444	24426444	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITSN2	50618	broad.mit.edu	37	2	24426444	24426444	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAK2	3717	broad.mit.edu	37	9	5126875	5126875	+	3'UTR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP2	9832	broad.mit.edu	37	5	147019032	147019032	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP2	9832	broad.mit.edu	37	5	147019032	147019032	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JAKMIP2	9832	broad.mit.edu	37	5	147019032	147019032	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JARID2	3720	broad.mit.edu	37	6	15513094	15513094	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JARID2	3720	broad.mit.edu	37	6	15513094	15513094	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JARID2	3720	broad.mit.edu	37	6	15513094	15513094	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMY	133746	broad.mit.edu	37	5	78610543	78610543	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMY	133746	broad.mit.edu	37	5	78610543	78610543	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JMY	133746	broad.mit.edu	37	5	78610543	78610543	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH4	84502	broad.mit.edu	37	14	24041135	24041135	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH4	84502	broad.mit.edu	37	14	24041135	24041135	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JPH4	84502	broad.mit.edu	37	14	24041135	24041135	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JRK	8629	broad.mit.edu	37	8	143746065	143746065	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
JRK	8629	broad.mit.edu	37	8	143746065	143746065	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124053026	124053026	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124053026	124053026	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KALRN	8997	broad.mit.edu	37	3	124053026	124053026	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62738855	62738855	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62738855	62738855	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KANK4	163782	broad.mit.edu	37	1	62738855	62738855	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KATNAL1	84056	broad.mit.edu	37	13	30801606	30801606	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KATNAL1	84056	broad.mit.edu	37	13	30801606	30801606	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KATNAL1	84056	broad.mit.edu	37	13	30801606	30801606	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA4	3739	broad.mit.edu	37	11	30032330	30032330	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA4	3739	broad.mit.edu	37	11	30032330	30032330	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA4	3739	broad.mit.edu	37	11	30032330	30032330	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73479952	73479952	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73479952	73479952	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB2	9312	broad.mit.edu	37	8	73479952	73479952	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC1	3746	broad.mit.edu	37	11	17793207	17793207	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC1	3746	broad.mit.edu	37	11	17793207	17793207	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNC1	3746	broad.mit.edu	37	11	17793207	17793207	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	211256166	211256166	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH1	3756	broad.mit.edu	37	1	211256166	211256166	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH2	3757	broad.mit.edu	37	7	150648497	150648497	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH2	3757	broad.mit.edu	37	7	150648497	150648497	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH2	3757	broad.mit.edu	37	7	150648497	150648497	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49937035	49937035	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH3	23416	broad.mit.edu	37	12	49937035	49937035	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63468328	63468328	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNH5	27133	broad.mit.edu	37	14	63468328	63468328	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ12	3768	broad.mit.edu	37	17	21318931	21318931	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ12	3768	broad.mit.edu	37	17	21318931	21318931	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118960761	118960761	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118960761	118960761	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK18	338567	broad.mit.edu	37	10	118960761	118960761	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK6	9424	broad.mit.edu	37	19	38817394	38817394	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK6	9424	broad.mit.edu	37	19	38817394	38817394	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ3	3786	broad.mit.edu	37	8	133152309	133152309	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ3	3786	broad.mit.edu	37	8	133152309	133152309	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ3	3786	broad.mit.edu	37	8	133152309	133152309	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73696655	73696655	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73696655	73696655	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNQ5	56479	broad.mit.edu	37	6	73696655	73696655	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD3	51133	broad.mit.edu	37	1	215759874	215759874	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD3	51133	broad.mit.edu	37	1	215777454	215777454	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD3	51133	broad.mit.edu	37	1	215759874	215759874	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD3	51133	broad.mit.edu	37	1	215777454	215777454	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD3	51133	broad.mit.edu	37	1	215759874	215759874	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD3	51133	broad.mit.edu	37	1	215777454	215777454	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD5	54442	broad.mit.edu	37	16	2732501	2732501	+	Translation_Start_Site	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCTD5	54442	broad.mit.edu	37	16	2732501	2732501	+	Translation_Start_Site	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3A	55818	broad.mit.edu	37	2	86678331	86678331	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3A	55818	broad.mit.edu	37	2	86718115	86718115	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3A	55818	broad.mit.edu	37	2	86678331	86678331	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3A	55818	broad.mit.edu	37	2	86718115	86718115	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3A	55818	broad.mit.edu	37	2	86678331	86678331	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3A	55818	broad.mit.edu	37	2	86718115	86718115	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM4A	9682	broad.mit.edu	37	1	44137514	44137514	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5B	10765	broad.mit.edu	37	1	202735991	202735991	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5B	10765	broad.mit.edu	37	1	202735991	202735991	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM5B	10765	broad.mit.edu	37	1	202735991	202735991	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142651692	142651692	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142651692	142651692	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KEL	3792	broad.mit.edu	37	7	142651692	142651692	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0020	9933	broad.mit.edu	37	9	2820099	2820099	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0020	9933	broad.mit.edu	37	9	2820099	2820099	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0020	9933	broad.mit.edu	37	9	2820099	2820099	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0319	9856	broad.mit.edu	37	6	24596192	24596192	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0430	9665	broad.mit.edu	37	16	15729469	15729469	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43889029	43889029	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43891436	43891436	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43909130	43909130	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43889029	43889029	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43891436	43891436	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43909130	43909130	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43889029	43889029	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43891436	43891436	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0467	23334	broad.mit.edu	37	1	43909130	43909130	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27765433	27765433	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27765433	27765433	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27765433	27765433	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0748	9840	broad.mit.edu	37	12	55356793	55356793	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0748	9840	broad.mit.edu	37	12	55356793	55356793	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0748	9840	broad.mit.edu	37	12	55356793	55356793	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0895	23366	broad.mit.edu	37	7	36396906	36396906	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0895	23366	broad.mit.edu	37	7	36396906	36396906	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0895	23366	broad.mit.edu	37	7	36396906	36396906	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0913	23053	broad.mit.edu	37	10	75555264	75555264	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123260563	123260563	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123260563	123260563	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1109	84162	broad.mit.edu	37	4	123260563	123260563	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57182405	57182405	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57193736	57193736	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57182405	57182405	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57193736	57193736	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57182405	57182405	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57193736	57193736	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1274	27143	broad.mit.edu	37	10	72293678	72293678	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1274	27143	broad.mit.edu	37	10	72293678	72293678	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1274	27143	broad.mit.edu	37	10	72293678	72293678	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1328	57536	broad.mit.edu	37	18	34415151	34415151	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1377	57562	broad.mit.edu	37	11	101786030	101786030	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1377	57562	broad.mit.edu	37	11	101786030	101786030	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1377	57562	broad.mit.edu	37	11	101786030	101786030	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94101056	94101056	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94101056	94101056	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1409	57578	broad.mit.edu	37	14	94101056	94101056	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1468	57614	broad.mit.edu	37	18	59942667	59942667	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1468	57614	broad.mit.edu	37	18	59942667	59942667	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1468	57614	broad.mit.edu	37	18	59942667	59942667	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1524	57650	broad.mit.edu	37	3	108278693	108278693	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1524	57650	broad.mit.edu	37	3	108278693	108278693	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1524	57650	broad.mit.edu	37	3	108278693	108278693	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1755	85449	broad.mit.edu	37	20	36854257	36854257	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113375768	113375768	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113375768	113375768	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2018	205717	broad.mit.edu	37	3	113375768	113375768	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13A	63971	broad.mit.edu	37	6	17779923	17779923	+	Intron	DEL	A	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	29048493	29048493	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	29048493	29048493	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF13B	23303	broad.mit.edu	37	8	29048493	29048493	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF19	124602	broad.mit.edu	37	17	72338734	72338734	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF19	124602	broad.mit.edu	37	17	72338734	72338734	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1A	547	broad.mit.edu	37	2	241658642	241658642	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1A	547	broad.mit.edu	37	2	241658642	241658642	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF1A	547	broad.mit.edu	37	2	241658642	241658642	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF22	3835	broad.mit.edu	37	16	29810856	29810856	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF22	3835	broad.mit.edu	37	16	29810856	29810856	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF22	3835	broad.mit.edu	37	16	29810856	29810856	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF27	55582	broad.mit.edu	37	9	86506225	86506225	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF27	55582	broad.mit.edu	37	9	86506225	86506225	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF27	55582	broad.mit.edu	37	9	86506225	86506225	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55377734	55377734	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55377734	55377734	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55377734	55377734	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL3	84623	broad.mit.edu	37	11	126306857	126306857	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL3	84623	broad.mit.edu	37	11	126306857	126306857	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL3	84623	broad.mit.edu	37	11	126306857	126306857	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF14	136259	broad.mit.edu	37	7	130417831	130417831	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF14	136259	broad.mit.edu	37	7	130417831	130417831	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF5	688	broad.mit.edu	37	13	73636958	73636958	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF5	688	broad.mit.edu	37	13	73636958	73636958	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLF5	688	broad.mit.edu	37	13	73636958	73636958	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70314575	70314575	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70314575	70314575	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70314575	70314575	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL20	27252	broad.mit.edu	37	1	173735426	173735426	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL20	27252	broad.mit.edu	37	1	173735426	173735426	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL20	27252	broad.mit.edu	37	1	173735426	173735426	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL6	89857	broad.mit.edu	37	3	183209920	183209920	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL6	89857	broad.mit.edu	37	3	183209920	183209920	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL6	89857	broad.mit.edu	37	3	183209920	183209920	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK1	3816	broad.mit.edu	37	19	51327020	51327020	+	5'UTR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK1	3816	broad.mit.edu	37	19	51327020	51327020	+	5'UTR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK1	3816	broad.mit.edu	37	19	51327020	51327020	+	5'UTR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK4	9622	broad.mit.edu	37	19	51412025	51412025	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNDC1	85442	broad.mit.edu	37	10	135011791	135011791	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNG1	3827	broad.mit.edu	37	3	186440181	186440181	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNG1	3827	broad.mit.edu	37	3	186440181	186440181	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KNG1	3827	broad.mit.edu	37	3	186440181	186440181	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRBA1	84626	broad.mit.edu	37	7	149431011	149431011	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT5	3852	broad.mit.edu	37	12	52910579	52910579	+	Silent	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT5	3852	broad.mit.edu	37	12	52910579	52910579	+	Silent	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT5	3852	broad.mit.edu	37	12	52910579	52910579	+	Silent	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6A	3853	broad.mit.edu	37	12	52885477	52885477	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6A	3853	broad.mit.edu	37	12	52885477	52885477	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT6A	3853	broad.mit.edu	37	12	52885477	52885477	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-8	386681	broad.mit.edu	37	21	46032564	46032564	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-8	386681	broad.mit.edu	37	21	46032564	46032564	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP10-8	386681	broad.mit.edu	37	21	46032564	46032564	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP13-1	140258	broad.mit.edu	37	21	31768708	31768708	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP26-1	388818	broad.mit.edu	37	21	31691975	31691975	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-5	439915	broad.mit.edu	37	11	1651332	1651332	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-5	439915	broad.mit.edu	37	11	1651332	1651332	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-8	57830	broad.mit.edu	37	11	71249015	71249015	+	5'Flank	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-8	57830	broad.mit.edu	37	11	71249015	71249015	+	5'Flank	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP5-8	57830	broad.mit.edu	37	11	71249015	71249015	+	5'Flank	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL3	84456	broad.mit.edu	37	6	130378624	130378624	+	Silent	SNP	G	T	T	rs142020636	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL3	84456	broad.mit.edu	37	6	130378624	130378624	+	Silent	SNP	G	T	T	rs142020636	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
L3MBTL3	84456	broad.mit.edu	37	6	130378624	130378624	+	Silent	SNP	G	T	T	rs142020636	byFrequency	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR2	3904	broad.mit.edu	37	19	55020357	55020357	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6976126	6976126	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6976126	6976126	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA1	284217	broad.mit.edu	37	18	6976126	6976126	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129511367	129511367	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129511367	129511367	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129511367	129511367	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112494032	112494032	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112494032	112494032	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA4	3910	broad.mit.edu	37	6	112494032	112494032	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107745083	107745083	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107745083	107745083	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB4	22798	broad.mit.edu	37	7	107745083	107745083	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC1	3915	broad.mit.edu	37	1	183090909	183090909	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC1	3915	broad.mit.edu	37	1	183090909	183090909	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC1	3915	broad.mit.edu	37	1	183090909	183090909	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133914297	133914297	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133962641	133962641	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133914297	133914297	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133962641	133962641	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133914297	133914297	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMP2	3920	broad.mit.edu	37	X	119580319	119580319	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMP2	3920	broad.mit.edu	37	X	119580319	119580319	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMP2	3920	broad.mit.edu	37	X	119580319	119580319	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARP4B	23185	broad.mit.edu	37	10	860901	860901	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36993349	36993349	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36993396	36993396	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36993349	36993349	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36993396	36993396	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36993349	36993349	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LBP	3929	broad.mit.edu	37	20	36993396	36993396	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3D	84648	broad.mit.edu	37	1	152552354	152552354	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3D	84648	broad.mit.edu	37	1	152552359	152552359	+	Silent	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3D	84648	broad.mit.edu	37	1	152552407	152552407	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3D	84648	broad.mit.edu	37	1	152552354	152552354	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3D	84648	broad.mit.edu	37	1	152552359	152552359	+	Silent	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3D	84648	broad.mit.edu	37	1	152552407	152552407	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3D	84648	broad.mit.edu	37	1	152552354	152552354	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3D	84648	broad.mit.edu	37	1	152552359	152552359	+	Silent	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE3D	84648	broad.mit.edu	37	1	152552407	152552407	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE4A	199834	broad.mit.edu	37	1	152681629	152681629	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE4A	199834	broad.mit.edu	37	1	152681629	152681629	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LCE4A	199834	broad.mit.edu	37	1	152681629	152681629	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHD	197257	broad.mit.edu	37	16	75150747	75150747	+	5'Flank	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHD	197257	broad.mit.edu	37	16	75150747	75150747	+	5'Flank	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLRAD3	143458	broad.mit.edu	37	11	36018905	36018905	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LELP1	149018	broad.mit.edu	37	1	153177368	153177368	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LELP1	149018	broad.mit.edu	37	1	153177368	153177368	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LELP1	149018	broad.mit.edu	37	1	153177368	153177368	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66042551	66042551	+	Intron	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66042551	66042551	+	Intron	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEPR	3953	broad.mit.edu	37	1	66042551	66042551	+	Intron	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LETMD1	25875	broad.mit.edu	37	12	51442900	51442900	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LETMD1	25875	broad.mit.edu	37	12	51442900	51442900	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LETMD1	25875	broad.mit.edu	37	12	51442900	51442900	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS3BP	3959	broad.mit.edu	37	17	76970703	76970703	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS3BP	3959	broad.mit.edu	37	17	76970703	76970703	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS9	3965	broad.mit.edu	37	17	25967657	25967657	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS9	3965	broad.mit.edu	37	17	25967657	25967657	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGALS9	3965	broad.mit.edu	37	17	25967657	25967657	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI2	55203	broad.mit.edu	37	4	25014018	25014018	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI2	55203	broad.mit.edu	37	4	25014018	25014018	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI2	55203	broad.mit.edu	37	4	25013901	25013901	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI2	55203	broad.mit.edu	37	4	25014018	25014018	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI3	203190	broad.mit.edu	37	8	22005801	22005801	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI3	203190	broad.mit.edu	37	8	22005801	22005801	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LGI3	203190	broad.mit.edu	37	8	22005801	22005801	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHB	3972	broad.mit.edu	37	19	49520185	49520185	+	Intron	SNP	C	A	A	rs35612764		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHB	3972	broad.mit.edu	37	19	49520185	49520185	+	Intron	SNP	C	A	A	rs35612764		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHCGR	3973	broad.mit.edu	37	2	48941147	48941147	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL1	340596	broad.mit.edu	37	X	111874563	111874563	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL1	340596	broad.mit.edu	37	X	111874563	111874563	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHFPL1	340596	broad.mit.edu	37	X	111874563	111874563	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX9	56956	broad.mit.edu	37	1	197890482	197890482	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX9	56956	broad.mit.edu	37	1	197890482	197890482	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LHX9	56956	broad.mit.edu	37	1	197890482	197890482	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG4	3981	broad.mit.edu	37	13	108861585	108861585	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG4	3981	broad.mit.edu	37	13	108861585	108861585	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG4	3981	broad.mit.edu	37	13	108861585	108861585	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA4	23547	broad.mit.edu	37	19	54848657	54848657	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA4	23547	broad.mit.edu	37	19	54848657	54848657	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55146212	55146212	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55147920	55147920	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55146212	55146212	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55147920	55147920	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55146212	55146212	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB1	10859	broad.mit.edu	37	19	55147920	55147920	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB3	11025	broad.mit.edu	37	19	54746496	54746496	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB3	11025	broad.mit.edu	37	19	54743050	54743050	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB3	11025	broad.mit.edu	37	19	54746496	54746496	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB3	11025	broad.mit.edu	37	19	54746496	54746496	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55174614	55174614	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55175159	55175159	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55174614	55174614	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55175159	55175159	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55175159	55175159	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPK	643414	broad.mit.edu	37	10	90486557	90486557	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPK	643414	broad.mit.edu	37	10	90499787	90499787	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPK	643414	broad.mit.edu	37	10	90486557	90486557	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPK	643414	broad.mit.edu	37	10	90499787	90499787	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPK	643414	broad.mit.edu	37	10	90486557	90486557	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIPK	643414	broad.mit.edu	37	10	90499787	90499787	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMNA	4000	broad.mit.edu	37	1	156106669	156106669	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMNA	4000	broad.mit.edu	37	1	156106669	156106669	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMX1B	4010	broad.mit.edu	37	9	129453365	129453365	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMX1B	4010	broad.mit.edu	37	9	129453365	129453365	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100133308	100133308	broad.mit.edu	37	10	45644305	45644305	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100133308	100133308	broad.mit.edu	37	10	45644305	45644305	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100133308	100133308	broad.mit.edu	37	10	45644305	45644305	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100286793	100286793	broad.mit.edu	37	1	143743095	143743095	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC100286793	100286793	broad.mit.edu	37	1	143743095	143743095	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC200030	200030	broad.mit.edu	37	1	148016366	148016366	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC341056	341056	broad.mit.edu	37	11	122888990	122888990	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC341056	341056	broad.mit.edu	37	11	122888990	122888990	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC341056	341056	broad.mit.edu	37	11	122888990	122888990	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC399959	399959	broad.mit.edu	37	11	122023061	122023061	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC399959	399959	broad.mit.edu	37	11	122023061	122023061	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC399959	399959	broad.mit.edu	37	11	122023061	122023061	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC400696	400696	broad.mit.edu	37	19	40172828	40172828	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440461	440461	broad.mit.edu	37	17	66195788	66195788	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440461	440461	broad.mit.edu	37	17	66195788	66195788	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC441601	441601	broad.mit.edu	37	11	50254432	50254432	+	RNA	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC441601	441601	broad.mit.edu	37	11	50254432	50254432	+	RNA	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC441601	441601	broad.mit.edu	37	11	50254432	50254432	+	RNA	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442308	442308	broad.mit.edu	37	7	55714232	55714232	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442308	442308	broad.mit.edu	37	7	55714232	55714232	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC442308	442308	broad.mit.edu	37	7	55714232	55714232	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646214	646214	broad.mit.edu	37	15	21937436	21937436	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646214	646214	broad.mit.edu	37	15	21937436	21937436	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC646214	646214	broad.mit.edu	37	15	21937436	21937436	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647121	647121	broad.mit.edu	37	1	121309960	121309961	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647121	647121	broad.mit.edu	37	1	121309960	121309961	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647121	647121	broad.mit.edu	37	1	121309960	121309961	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75813904	75813904	+	3'UTR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75813904	75813904	+	3'UTR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC647288	647288	broad.mit.edu	37	13	75813904	75813904	+	3'UTR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728989	728989	broad.mit.edu	37	1	146494738	146494738	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728989	728989	broad.mit.edu	37	1	146494738	146494738	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118147138	118147138	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118147138	118147138	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LONRF3	79836	broad.mit.edu	37	X	118147138	118147138	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOXL4	84171	broad.mit.edu	37	10	100017495	100017495	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOXL4	84171	broad.mit.edu	37	10	100017495	100017495	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOXL4	84171	broad.mit.edu	37	10	100017495	100017495	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOX	4015	broad.mit.edu	37	5	121402393	121402393	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOX	4015	broad.mit.edu	37	5	121402393	121402393	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOX	4015	broad.mit.edu	37	5	121402393	121402393	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160977165	160977165	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160998097	160998097	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160977165	160977165	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160998097	160998097	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160977165	160977165	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPA	4018	broad.mit.edu	37	6	160998097	160998097	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPHN2	23266	broad.mit.edu	37	1	81967922	81967922	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN2	9663	broad.mit.edu	37	18	2922223	2922223	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN2	9663	broad.mit.edu	37	18	2922223	2922223	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN2	9663	broad.mit.edu	37	18	2922223	2922223	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99767413	99767413	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99767413	99767413	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99767413	99767413	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRAT	9227	broad.mit.edu	37	4	155670250	155670250	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRAT	9227	broad.mit.edu	37	4	155670250	155670250	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRAT	9227	broad.mit.edu	37	4	155670250	155670250	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIT2	340745	broad.mit.edu	37	10	85982088	85982089	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIT2	340745	broad.mit.edu	37	10	85982088	85982089	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRIT2	340745	broad.mit.edu	37	10	85982088	85982089	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP2	4036	broad.mit.edu	37	2	170010812	170010812	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44145419	44145419	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44145419	44145419	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44145419	44145419	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC1	55227	broad.mit.edu	37	6	53747620	53747620	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC1	55227	broad.mit.edu	37	6	53747620	53747620	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC49	54839	broad.mit.edu	37	15	71185460	71185460	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC59	55379	broad.mit.edu	37	17	48474405	48474405	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC66	339977	broad.mit.edu	37	4	52860545	52860545	+	Nonstop_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70504811	70504811	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70504811	70504811	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC7	57554	broad.mit.edu	37	1	70504811	70504811	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85438657	85438657	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ3	127255	broad.mit.edu	37	1	74648615	74648615	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM1	347730	broad.mit.edu	37	2	80530120	80530120	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM1	347730	broad.mit.edu	37	2	80530120	80530120	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM1	347730	broad.mit.edu	37	2	80530120	80530120	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77745831	77745831	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77745831	77745831	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77745831	77745831	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	115805319	115805319	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	115805319	115805319	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LSAMP	4045	broad.mit.edu	37	3	115805319	115805319	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTB4R	1241	broad.mit.edu	37	14	24785583	24785583	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTB4R	1241	broad.mit.edu	37	14	24785583	24785583	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33174089	33174089	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33359928	33359928	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33442569	33442569	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33174089	33174089	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33359928	33359928	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33442569	33442569	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33359928	33359928	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP1	4052	broad.mit.edu	37	2	33442569	33442569	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP2	4053	broad.mit.edu	37	14	74972698	74972698	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP2	4053	broad.mit.edu	37	14	74972698	74972698	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP2	4053	broad.mit.edu	37	14	74972698	74972698	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP3	4054	broad.mit.edu	37	11	65315462	65315462	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP3	4054	broad.mit.edu	37	11	65315462	65315462	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD3	27076	broad.mit.edu	37	19	43966018	43966018	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD3	27076	broad.mit.edu	37	19	43966018	43966018	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPD3	27076	broad.mit.edu	37	19	43966018	43966018	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235973688	235973688	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235973688	235973688	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235973688	235973688	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTR1	8216	broad.mit.edu	37	22	21348256	21348256	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTR1	8216	broad.mit.edu	37	22	21348256	21348256	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTS2	84445	broad.mit.edu	37	10	102763886	102763886	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTS2	84445	broad.mit.edu	37	10	102763886	102763886	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LZTS2	84445	broad.mit.edu	37	10	102763886	102763886	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39945451	39945451	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39945451	39945451	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39945451	39945451	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA12	4111	broad.mit.edu	37	X	151896836	151896836	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140995285	140995285	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140995285	140995285	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC1	9947	broad.mit.edu	37	X	140995285	140995285	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140983002	140983002	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140983002	140983002	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140983002	140983002	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML2	84441	broad.mit.edu	37	11	95713012	95713012	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAML3	55534	broad.mit.edu	37	4	140809943	140809943	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2A1	4124	broad.mit.edu	37	5	109117174	109117174	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2A1	4124	broad.mit.edu	37	5	109117174	109117174	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2A1	4124	broad.mit.edu	37	5	109117174	109117174	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2C1	4123	broad.mit.edu	37	15	75650895	75650895	+	Missense_Mutation	SNP	C	T	T	rs150018240		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2C1	4123	broad.mit.edu	37	15	75650895	75650895	+	Missense_Mutation	SNP	C	T	T	rs150018240		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAN2C1	4123	broad.mit.edu	37	15	75650895	75650895	+	Missense_Mutation	SNP	C	T	T	rs150018240		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1LC3C	440738	broad.mit.edu	37	1	242162037	242162037	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1LC3C	440738	broad.mit.edu	37	1	242162037	242162037	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP1LC3C	440738	broad.mit.edu	37	1	242162037	242162037	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21201787	21201787	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2K3	5606	broad.mit.edu	37	17	21201787	21201787	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K2	5871	broad.mit.edu	37	11	64566872	64566873	+	Intron	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP4K2	5871	broad.mit.edu	37	11	64566872	64566873	+	Intron	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK4	5596	broad.mit.edu	37	18	48190638	48190638	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARCH1	55016	broad.mit.edu	37	4	165110491	165110491	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220752848	220752848	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220752848	220752848	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK1	4139	broad.mit.edu	37	1	220752848	220752848	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK4	57787	broad.mit.edu	37	19	45769742	45769742	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186938944	186938944	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186938944	186938944	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MASP1	5648	broad.mit.edu	37	3	186938944	186938944	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN4	8785	broad.mit.edu	37	20	43922340	43922340	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD1	4152	broad.mit.edu	37	18	47801655	47801655	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD3	53615	broad.mit.edu	37	19	1581088	1581088	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MBD3	53615	broad.mit.edu	37	19	1581088	1581088	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCPH1	79648	broad.mit.edu	37	8	6338368	6338368	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCPH1	79648	broad.mit.edu	37	8	6338368	6338368	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MCPH1	79648	broad.mit.edu	37	8	6338368	6338368	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47601038	47601038	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47601038	47601038	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47315116	47315116	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED1	5469	broad.mit.edu	37	17	37561572	37561572	+	3'UTR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED1	5469	broad.mit.edu	37	17	37561572	37561572	+	3'UTR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2C	4208	broad.mit.edu	37	5	88057031	88057031	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2C	4208	broad.mit.edu	37	5	88057031	88057031	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2C	4208	broad.mit.edu	37	5	88057031	88057031	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEF2D	4209	broad.mit.edu	37	1	156438560	156438560	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3298786	3298786	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3298786	3298786	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126666979	126666979	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126666979	126666979	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF10	84466	broad.mit.edu	37	5	126666979	126666979	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEGF8	1954	broad.mit.edu	37	19	42862465	42862465	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEI1	150365	broad.mit.edu	37	22	42112002	42112002	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEI1	150365	broad.mit.edu	37	22	42112002	42112002	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1A	4224	broad.mit.edu	37	6	46806811	46806811	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1A	4224	broad.mit.edu	37	6	46806811	46806811	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEP1A	4224	broad.mit.edu	37	6	46806811	46806811	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88767150	88767150	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88767161	88767161	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88767150	88767150	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88767161	88767161	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88767150	88767150	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPE	56955	broad.mit.edu	37	4	88767161	88767161	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METAP1	23173	broad.mit.edu	37	4	99970129	99970129	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METAP1	23173	broad.mit.edu	37	4	99970129	99970129	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METAP1	23173	broad.mit.edu	37	4	99970129	99970129	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL4	64863	broad.mit.edu	37	18	2566948	2566948	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL4	64863	broad.mit.edu	37	18	2566948	2566948	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
METTL4	64863	broad.mit.edu	37	18	2566948	2566948	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141734530	141734530	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141755465	141755465	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141765177	141765177	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141734530	141734530	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141755465	141755465	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141765177	141765177	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141734530	141734530	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141740038	141740038	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141755465	141755465	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAM	8972	broad.mit.edu	37	7	141765177	141765177	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74899482	74899482	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74899482	74899482	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5B	146664	broad.mit.edu	37	17	74899482	74899482	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43232887	43232887	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43232887	43232887	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC42105	167359	broad.mit.edu	37	5	43232887	43232887	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL3	57553	broad.mit.edu	37	22	18301457	18301457	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL3	57553	broad.mit.edu	37	22	18301457	18301457	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICAL3	57553	broad.mit.edu	37	22	18301457	18301457	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MICA	4276	broad.mit.edu	37	6	31378225	31378226	+	Intron	INS	-	CCT	CCT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MID1IP1	58526	broad.mit.edu	37	X	38664295	38664295	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MID1IP1	58526	broad.mit.edu	37	X	38664295	38664295	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MID1IP1	58526	broad.mit.edu	37	X	38664295	38664295	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIOS	54468	broad.mit.edu	37	7	7634818	7634818	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIOS	54468	broad.mit.edu	37	7	7634818	7634818	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIOS	54468	broad.mit.edu	37	7	7634818	7634818	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR492	574449	broad.mit.edu	37	12	95228171	95228171	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR492	574449	broad.mit.edu	37	12	95228171	95228171	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR492	574449	broad.mit.edu	37	12	95228171	95228171	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR521-2	574481	broad.mit.edu	37	19	54219926	54219926	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR521-2	574481	broad.mit.edu	37	19	54219926	54219926	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR521-2	574481	broad.mit.edu	37	19	54219926	54219926	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR544	664613	broad.mit.edu	37	14	101515025	101515025	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR544	664613	broad.mit.edu	37	14	101515025	101515025	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR544	664613	broad.mit.edu	37	14	101515025	101515025	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR663B	100302269	broad.mit.edu	37	2	133014651	133014652	+	RNA	INS	-	C	C	rs150907057		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIXL1	83881	broad.mit.edu	37	1	226413314	226413314	+	Frame_Shift_Del	DEL	A	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIXL1	83881	broad.mit.edu	37	1	226413314	226413314	+	Frame_Shift_Del	DEL	A	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIXL1	83881	broad.mit.edu	37	1	226413314	226413314	+	Frame_Shift_Del	DEL	A	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLL3	58508	broad.mit.edu	37	7	151962159	151962159	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLXIP	22877	broad.mit.edu	37	12	122617836	122617836	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLXIP	22877	broad.mit.edu	37	12	122617836	122617836	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLXIP	22877	broad.mit.edu	37	12	122617836	122617836	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLYCD	23417	broad.mit.edu	37	16	83933047	83933047	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLYCD	23417	broad.mit.edu	37	16	83933047	83933047	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMEL1	79258	broad.mit.edu	37	1	2537711	2537711	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMEL1	79258	broad.mit.edu	37	1	2537711	2537711	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP10	4319	broad.mit.edu	37	11	102643716	102643716	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89198859	89198859	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89198859	89198859	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP16	4325	broad.mit.edu	37	8	89198859	89198859	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44637627	44637627	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44637627	44637627	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44637627	44637627	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158811814	158811814	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158815548	158815548	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158811814	158811814	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158815548	158815548	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158811814	158811814	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MNDA	4332	broad.mit.edu	37	1	158815548	158815548	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOCOS	55034	broad.mit.edu	37	18	33784959	33784960	+	Intron	INS	-	AAAAA	AAAAA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORF4	10934	broad.mit.edu	37	4	174537962	174537962	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORF4	10934	broad.mit.edu	37	4	174537962	174537962	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MORF4	10934	broad.mit.edu	37	4	174537962	174537962	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPDZ	8777	broad.mit.edu	37	9	13125097	13125097	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPDZ	8777	broad.mit.edu	37	9	13125097	13125097	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPRIP	23164	broad.mit.edu	37	17	16978980	16978980	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPRIP	23164	broad.mit.edu	37	17	17076222	17076222	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPRIP	23164	broad.mit.edu	37	17	16978980	16978980	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPRIP	23164	broad.mit.edu	37	17	17076222	17076222	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPRIP	23164	broad.mit.edu	37	17	16978980	16978980	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRX3	117195	broad.mit.edu	37	11	18159297	18159297	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRX3	117195	broad.mit.edu	37	11	18159297	18159297	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRGPRX3	117195	broad.mit.edu	37	11	18159297	18159297	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL24	79590	broad.mit.edu	37	1	156708444	156708445	+	Frame_Shift_Ins	INS	-	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL30	51263	broad.mit.edu	37	2	99804653	99804653	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL30	51263	broad.mit.edu	37	2	99804653	99804653	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPL30	51263	broad.mit.edu	37	2	99804653	99804653	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A12	54860	broad.mit.edu	37	11	60274425	60274425	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A12	54860	broad.mit.edu	37	11	60274425	60274425	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A12	54860	broad.mit.edu	37	11	60274425	60274425	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSC	9242	broad.mit.edu	37	8	72754932	72754932	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSC	9242	broad.mit.edu	37	8	72754932	72754932	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSC	9242	broad.mit.edu	37	8	72754932	72754932	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47690447	47690447	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSH2	4436	broad.mit.edu	37	2	47690447	47690447	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSLN	10232	broad.mit.edu	37	16	815525	815525	+	Splice_Site	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MSLN	10232	broad.mit.edu	37	16	815525	815525	+	Splice_Site	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MST1P9	11223	broad.mit.edu	37	1	17085406	17085407	+	Frame_Shift_Ins	INS	-	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTBP	27085	broad.mit.edu	37	8	121457874	121457874	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTBP	27085	broad.mit.edu	37	8	121457874	121457874	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTBP	27085	broad.mit.edu	37	8	121457874	121457874	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1L	25902	broad.mit.edu	37	6	151277328	151277328	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTHFD1L	25902	broad.mit.edu	37	6	151277328	151277328	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR14	64419	broad.mit.edu	37	3	9712911	9712911	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR14	64419	broad.mit.edu	37	3	9712911	9712911	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTMR14	64419	broad.mit.edu	37	3	9712911	9712911	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11193404	11193404	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	236988761	236988761	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	236988761	236988761	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTR	4548	broad.mit.edu	37	1	236988761	236988761	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTUS2	23281	broad.mit.edu	37	13	30072408	30072408	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9038273	9038273	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9047921	9047921	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9038273	9038273	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9047921	9047921	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9038273	9038273	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9047921	9047921	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100678604	100678604	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100680895	100680895	+	Silent	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100678604	100678604	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100680895	100680895	+	Silent	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100678604	100678604	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC17	140453	broad.mit.edu	37	7	100680895	100680895	+	Silent	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC21	394263	broad.mit.edu	37	6	30955175	30955175	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC21	394263	broad.mit.edu	37	6	30955175	30955175	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC21	394263	broad.mit.edu	37	6	30954905	30954905	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1077683	1077683	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1077683	1077683	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUSK	4593	broad.mit.edu	37	9	113563158	113563158	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUSK	4593	broad.mit.edu	37	9	113563158	113563158	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUSK	4593	broad.mit.edu	37	9	113563158	113563158	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX1	4599	broad.mit.edu	37	21	42811572	42811572	+	Intron	SNP	G	A	A	rs138419122	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX1	4599	broad.mit.edu	37	21	42811572	42811572	+	Intron	SNP	G	A	A	rs138419122	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX1	4599	broad.mit.edu	37	21	42811572	42811572	+	Intron	SNP	G	A	A	rs138419122	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX2	4600	broad.mit.edu	37	21	42771258	42771258	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX2	4600	broad.mit.edu	37	21	42771258	42771258	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MX2	4600	broad.mit.edu	37	21	42771258	42771258	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3241316	3241316	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3241316	3241316	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MXRA5	25878	broad.mit.edu	37	X	3241316	3241316	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102020706	102020706	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102020706	102020706	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC1	4604	broad.mit.edu	37	12	102020706	102020706	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPH	4608	broad.mit.edu	37	1	203137866	203137866	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPH	4608	broad.mit.edu	37	1	203137866	203137866	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYB	4602	broad.mit.edu	37	6	135539023	135539023	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYB	4602	broad.mit.edu	37	6	135539023	135539023	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYB	4602	broad.mit.edu	37	6	135539023	135539023	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77837727	77837727	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYEF2	50804	broad.mit.edu	37	15	48441133	48441133	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYEF2	50804	broad.mit.edu	37	15	48441133	48441133	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYEF2	50804	broad.mit.edu	37	15	48441133	48441133	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15841828	15841828	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15847438	15847438	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15841828	15841828	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15847438	15847438	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH11	4629	broad.mit.edu	37	16	15841828	15841828	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10233640	10233640	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH13	8735	broad.mit.edu	37	17	10233640	10233640	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH14	79784	broad.mit.edu	37	19	50779265	50779265	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH14	79784	broad.mit.edu	37	19	50779265	50779265	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH14	79784	broad.mit.edu	37	19	50779265	50779265	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10399714	10399714	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10399714	10399714	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10399714	10399714	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH1	4619	broad.mit.edu	37	17	10420002	10420002	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10446623	10446623	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10448802	10448802	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10448802	10448802	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10448802	10448802	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23853535	23853535	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23853535	23853535	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH6	4624	broad.mit.edu	37	14	23853535	23853535	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYLK	4638	broad.mit.edu	37	3	123457916	123457917	+	Intron	DNP	GG	CT	CT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109793613	109793613	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO16	23026	broad.mit.edu	37	13	109793613	109793613	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26422331	26422331	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26422331	26422331	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO18B	84700	broad.mit.edu	37	22	26422331	26422331	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1D	4642	broad.mit.edu	37	17	31105502	31105502	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1D	4642	broad.mit.edu	37	17	31105502	31105502	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1D	4642	broad.mit.edu	37	17	31105502	31105502	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1G	64005	broad.mit.edu	37	7	45011815	45011815	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1G	64005	broad.mit.edu	37	7	45011815	45011815	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1G	64005	broad.mit.edu	37	7	45011815	45011815	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47373438	47373438	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47373438	47373438	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47373438	47373438	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24388533	24388533	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24421441	24421441	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24388533	24388533	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24421441	24421441	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24388533	24388533	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM3	127294	broad.mit.edu	37	1	24421441	24421441	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST4	23522	broad.mit.edu	37	10	76736089	76736089	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST4	23522	broad.mit.edu	37	10	76736089	76736089	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYST4	23522	broad.mit.edu	37	10	76736089	76736089	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGPA	51172	broad.mit.edu	37	16	5078049	5078049	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGPA	51172	broad.mit.edu	37	16	5078049	5078049	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGPA	51172	broad.mit.edu	37	16	5078049	5078049	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101797007	101797007	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NALCN	259232	broad.mit.edu	37	13	101797007	101797007	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAT8	9027	broad.mit.edu	37	2	73868896	73868896	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAT8	9027	broad.mit.edu	37	2	73868896	73868896	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15417226	15417226	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15468435	15468435	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15701451	15701451	+	5'UTR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15417226	15417226	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15468435	15468435	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15701451	15701451	+	5'UTR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15417226	15417226	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15468435	15468435	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15701451	15701451	+	5'UTR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35733541	35733541	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35733541	35733541	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBEA	26960	broad.mit.edu	37	13	35733541	35733541	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145300050	145300050	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145300050	145300050	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	145300050	145300050	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF10	100132406	broad.mit.edu	37	1	146013606	146013606	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16894130	16894130	+	Intron	SNP	C	A	A	rs150693321	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF1	55672	broad.mit.edu	37	1	16901287	16901287	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAN	1463	broad.mit.edu	37	19	19337514	19337514	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAN	1463	broad.mit.edu	37	19	19337514	19337514	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPH	23397	broad.mit.edu	37	2	97008585	97008585	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPH	23397	broad.mit.edu	37	2	97008585	97008585	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133554252	133554252	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCLN	56926	broad.mit.edu	37	19	3193456	3193456	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCLN	56926	broad.mit.edu	37	19	3193456	3193456	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA2	10499	broad.mit.edu	37	8	71056877	71056877	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA2	10499	broad.mit.edu	37	8	71056877	71056877	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOA2	10499	broad.mit.edu	37	8	71056877	71056877	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCR2	9436	broad.mit.edu	37	6	41309911	41309911	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCR2	9436	broad.mit.edu	37	6	41318322	41318322	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCR2	9436	broad.mit.edu	37	6	41309911	41309911	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCR2	9436	broad.mit.edu	37	6	41318322	41318322	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCR2	9436	broad.mit.edu	37	6	41309911	41309911	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCR2	9436	broad.mit.edu	37	6	41318322	41318322	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCRNA00169	400508	broad.mit.edu	37	16	21328321	21328321	+	RNA	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDRG2	57447	broad.mit.edu	37	14	21486634	21486634	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDRG2	57447	broad.mit.edu	37	14	21486634	21486634	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDRG2	57447	broad.mit.edu	37	14	21486634	21486634	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119059181	119059181	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119158234	119158234	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119059181	119059181	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119158234	119158234	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119059181	119059181	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119158234	119158234	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115773883	115773883	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115773883	115773883	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST4	64579	broad.mit.edu	37	4	115773883	115773883	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA4	4697	broad.mit.edu	37	7	10979455	10979455	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA4	4697	broad.mit.edu	37	7	10979455	10979455	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFA4	4697	broad.mit.edu	37	7	10979455	10979455	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152512820	152512820	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152512820	152512820	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152512820	152512820	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56140724	56140724	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56140724	56140724	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4	4734	broad.mit.edu	37	15	56140724	56140724	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72400910	72400910	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72400910	72400910	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEGR1	257194	broad.mit.edu	37	1	72400910	72400910	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK4	6787	broad.mit.edu	37	3	52797446	52797446	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK4	6787	broad.mit.edu	37	3	52797446	52797446	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK4	6787	broad.mit.edu	37	3	52797446	52797446	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK6	10783	broad.mit.edu	37	9	127089784	127089784	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK6	10783	broad.mit.edu	37	9	127089784	127089784	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	20982131	20982131	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	20982131	20982131	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	20982131	20982131	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NES	10763	broad.mit.edu	37	1	156644959	156644959	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NES	10763	broad.mit.edu	37	1	156644959	156644959	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70423369	70423369	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70423369	70423369	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70423369	70423369	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	21134259	21134260	+	RNA	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	21137032	21137032	+	5'Flank	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	21134259	21134260	+	RNA	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	21137032	21137032	+	5'Flank	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1P1	440225	broad.mit.edu	37	15	21137032	21137032	+	5'Flank	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29562738	29562739	+	Frame_Shift_Del	DEL	CT	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29562738	29562739	+	Frame_Shift_Del	DEL	CT	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFAT5	10725	broad.mit.edu	37	16	69660388	69660388	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIL3	4783	broad.mit.edu	37	9	94172835	94172835	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIL3	4783	broad.mit.edu	37	9	94172835	94172835	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFYA	4800	broad.mit.edu	37	6	41060587	41060587	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFYA	4800	broad.mit.edu	37	6	41060587	41060587	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFYA	4800	broad.mit.edu	37	6	41060587	41060587	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGEF	25791	broad.mit.edu	37	2	233791952	233791952	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGEF	25791	broad.mit.edu	37	2	233791952	233791952	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHSL2	340527	broad.mit.edu	37	X	71360426	71360426	+	Missense_Mutation	SNP	G	T	T	rs140270842		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHSL2	340527	broad.mit.edu	37	X	71360426	71360426	+	Missense_Mutation	SNP	G	T	T	rs140270842		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NHSL2	340527	broad.mit.edu	37	X	71360426	71360426	+	Missense_Mutation	SNP	G	T	T	rs140270842		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236195859	236195859	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236201439	236201439	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236195859	236195859	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236201439	236201439	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236195859	236195859	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NID1	4811	broad.mit.edu	37	1	236201439	236201439	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPAL3	57185	broad.mit.edu	37	1	24785406	24785406	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPAL3	57185	broad.mit.edu	37	1	24785406	24785406	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPAL3	57185	broad.mit.edu	37	1	24785406	24785406	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN3	286183	broad.mit.edu	37	8	63831079	63831079	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN3	286183	broad.mit.edu	37	8	63831079	63831079	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN3	286183	broad.mit.edu	37	8	63831079	63831079	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN4	128414	broad.mit.edu	37	20	61874102	61874102	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKAIN4	128414	broad.mit.edu	37	20	61874102	61874102	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKIRAS2	28511	broad.mit.edu	37	17	40175884	40175884	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKIRAS2	28511	broad.mit.edu	37	17	40175884	40175884	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKIRAS2	28511	broad.mit.edu	37	17	40175884	40175884	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX2-5	1482	broad.mit.edu	37	5	172662181	172662181	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX6-1	4825	broad.mit.edu	37	4	85417018	85417018	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX6-1	4825	broad.mit.edu	37	4	85417018	85417018	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX6-1	4825	broad.mit.edu	37	4	85417018	85417018	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC4	58484	broad.mit.edu	37	2	32477681	32477681	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC4	58484	broad.mit.edu	37	2	32477681	32477681	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRC4	58484	broad.mit.edu	37	2	32477681	32477681	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP14	338323	broad.mit.edu	37	11	7092508	7092508	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55497607	55497607	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55497607	55497607	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP2	55655	broad.mit.edu	37	19	55497607	55497607	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247587802	247587802	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247587802	247587802	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP3	114548	broad.mit.edu	37	1	247587802	247587802	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56369376	56369376	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56370026	56370026	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56369376	56369376	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56369376	56369376	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NLRP4	147945	broad.mit.edu	37	19	56370026	56370026	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMUR1	10316	broad.mit.edu	37	2	232393103	232393103	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMUR1	10316	broad.mit.edu	37	2	232393103	232393103	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNMT	4837	broad.mit.edu	37	11	114182861	114182861	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NNMT	4837	broad.mit.edu	37	11	114183054	114183054	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOBOX	135935	broad.mit.edu	37	7	144097391	144097391	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOBOX	135935	broad.mit.edu	37	7	144097391	144097391	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOBOX	135935	broad.mit.edu	37	7	144097391	144097391	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOC2L	26155	broad.mit.edu	37	1	881918	881918	+	Missense_Mutation	SNP	G	A	A	rs35471880	byFrequency;by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOM1	64434	broad.mit.edu	37	7	156747084	156747084	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1AP	9722	broad.mit.edu	37	1	162039935	162039935	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1AP	9722	broad.mit.edu	37	1	162336927	162336927	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1AP	9722	broad.mit.edu	37	1	162039935	162039935	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1AP	9722	broad.mit.edu	37	1	162336927	162336927	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1AP	9722	broad.mit.edu	37	1	162336927	162336927	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117718572	117718572	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117718572	117718572	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117718572	117718572	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32168740	32168740	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32168740	32168740	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH4	4855	broad.mit.edu	37	6	32168740	32168740	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOX4	50507	broad.mit.edu	37	11	89106819	89106819	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1L1	29881	broad.mit.edu	37	7	44573287	44573287	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1L1	29881	broad.mit.edu	37	7	44573287	44573287	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1L1	29881	broad.mit.edu	37	7	44573287	44573287	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPC1	4864	broad.mit.edu	37	18	21140248	21140248	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP3	27031	broad.mit.edu	37	3	132440852	132440852	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP3	27031	broad.mit.edu	37	3	132440852	132440852	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY1R	4886	broad.mit.edu	37	4	164247270	164247270	+	Missense_Mutation	SNP	C	T	T	rs148479836		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY2R	4887	broad.mit.edu	37	4	156135962	156135962	+	Missense_Mutation	SNP	G	T	T	rs147783618		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY2R	4887	broad.mit.edu	37	4	156135962	156135962	+	Missense_Mutation	SNP	G	T	T	rs147783618		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPY2R	4887	broad.mit.edu	37	4	156135962	156135962	+	Missense_Mutation	SNP	G	T	T	rs147783618		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2F1	7025	broad.mit.edu	37	5	92929645	92929645	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR2F1	7025	broad.mit.edu	37	5	92929645	92929645	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR5A2	2494	broad.mit.edu	37	1	200116836	200116836	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR5A2	2494	broad.mit.edu	37	1	200116836	200116836	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR5A2	2494	broad.mit.edu	37	1	200116836	200116836	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR6A1	2649	broad.mit.edu	37	9	127306144	127306144	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRSN1	140767	broad.mit.edu	37	6	24134721	24134721	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRSN1	140767	broad.mit.edu	37	6	24145768	24145768	+	Intron	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRSN1	140767	broad.mit.edu	37	6	24134721	24134721	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRSN1	140767	broad.mit.edu	37	6	24145768	24145768	+	Intron	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRSN1	140767	broad.mit.edu	37	6	24134721	24134721	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRSN1	140767	broad.mit.edu	37	6	24145768	24145768	+	Intron	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN2	9379	broad.mit.edu	37	11	64409970	64409970	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN2	9379	broad.mit.edu	37	11	64409970	64409970	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	78993116	78993116	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	78748476	78748476	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	78993116	78993116	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	78748476	78748476	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	78993116	78993116	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6611754	6611754	+	Intron	SNP	C	T	T	rs72127984		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NSUN2	54888	broad.mit.edu	37	5	6611754	6611754	+	Intron	SNP	C	T	T	rs72127984		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	131240963	131240963	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTM	50863	broad.mit.edu	37	11	131240963	131240963	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107973208	107973208	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107973208	107973208	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTNG1	22854	broad.mit.edu	37	1	107973208	107973208	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK1	4914	broad.mit.edu	37	1	156834308	156834308	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK1	4914	broad.mit.edu	37	1	156786037	156786037	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK1	4914	broad.mit.edu	37	1	156834308	156834308	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87636431	87636431	+	3'UTR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUF2	83540	broad.mit.edu	37	1	163298635	163298635	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUF2	83540	broad.mit.edu	37	1	163298635	163298635	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUF2	83540	broad.mit.edu	37	1	163298635	163298635	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP133	55746	broad.mit.edu	37	1	229602602	229602602	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP133	55746	broad.mit.edu	37	1	229622035	229622035	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP133	55746	broad.mit.edu	37	1	229602602	229602602	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP133	55746	broad.mit.edu	37	1	229622035	229622035	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP133	55746	broad.mit.edu	37	1	229622035	229622035	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135310154	135310154	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135310154	135310154	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135310154	135310154	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	154098755	154098756	+	Intron	DNP	CT	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	154098755	154098756	+	Intron	DNP	CT	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP210L	91181	broad.mit.edu	37	1	154098755	154098756	+	Intron	DNP	CT	AA	AA			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP214	8021	broad.mit.edu	37	9	134049354	134049354	+	Intron	DEL	T	-	-	rs79169508		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP35	129401	broad.mit.edu	37	2	183989185	183989185	+	5'UTR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP35	129401	broad.mit.edu	37	2	183989185	183989185	+	5'UTR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP35	129401	broad.mit.edu	37	2	183989185	183989185	+	5'UTR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP43	348995	broad.mit.edu	37	6	150067678	150067678	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP43	348995	broad.mit.edu	37	6	150067678	150067678	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP93	9688	broad.mit.edu	37	16	56878328	56878328	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP93	9688	broad.mit.edu	37	16	56878328	56878328	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP93	9688	broad.mit.edu	37	16	56878328	56878328	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP98	4928	broad.mit.edu	37	11	3697905	3697905	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP98	4928	broad.mit.edu	37	11	3697905	3697905	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP98	4928	broad.mit.edu	37	11	3697905	3697905	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUPL1	9818	broad.mit.edu	37	13	25881957	25881957	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUPL1	9818	broad.mit.edu	37	13	25881957	25881957	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUPL1	9818	broad.mit.edu	37	13	25881957	25881957	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF1	10482	broad.mit.edu	37	11	62569274	62569274	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF1	10482	broad.mit.edu	37	11	62569274	62569274	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF1	10482	broad.mit.edu	37	11	62569274	62569274	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24877034	24877034	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24877306	24877306	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24878485	24878485	+	Silent	SNP	G	T	T	rs12897153	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24877034	24877034	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24877306	24877306	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24878485	24878485	+	Silent	SNP	G	T	T	rs12897153	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24877034	24877034	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24877306	24877306	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NYNRIN	57523	broad.mit.edu	37	14	24878485	24878485	+	Silent	SNP	G	T	T	rs12897153	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228464950	228464950	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228523918	228523918	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228464950	228464950	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228523918	228523918	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228523918	228523918	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCRL	4952	broad.mit.edu	37	X	128722833	128722833	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCRL	4952	broad.mit.edu	37	X	128722833	128722833	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCRL	4952	broad.mit.edu	37	X	128722833	128722833	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167525048	167525048	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167525048	167525048	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ2	57451	broad.mit.edu	37	5	167525048	167525048	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183664646	183664646	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ3	55714	broad.mit.edu	37	4	183664646	183664646	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78468036	78468036	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78468036	78468036	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ODZ4	26011	broad.mit.edu	37	11	78468036	78468036	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50943220	50943220	+	3'UTR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50943220	50943220	+	3'UTR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDHL	55753	broad.mit.edu	37	10	50943220	50943220	+	3'UTR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDH	4967	broad.mit.edu	37	7	44735844	44735844	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGDH	4967	broad.mit.edu	37	7	44735844	44735844	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGN	4969	broad.mit.edu	37	9	95165620	95165621	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGN	4969	broad.mit.edu	37	9	95165620	95165621	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OGN	4969	broad.mit.edu	37	9	95165620	95165621	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2A	169611	broad.mit.edu	37	9	127566288	127566288	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFML2A	169611	broad.mit.edu	37	9	127566288	127566288	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN5	221391	broad.mit.edu	37	6	47754190	47754190	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN5	221391	broad.mit.edu	37	6	47754190	47754190	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPN5	221391	broad.mit.edu	37	6	47754190	47754190	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10S1	219873	broad.mit.edu	37	11	123848123	123848123	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10W1	81341	broad.mit.edu	37	11	58034387	58034387	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10W1	81341	broad.mit.edu	37	11	58034387	58034387	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10W1	81341	broad.mit.edu	37	11	58034387	58034387	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C2	392376	broad.mit.edu	37	9	107367610	107367610	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C2	392376	broad.mit.edu	37	9	107367610	107367610	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C2	392376	broad.mit.edu	37	9	107367610	107367610	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C2	392376	broad.mit.edu	37	9	107367620	107367620	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C4	138804	broad.mit.edu	37	9	107288712	107288712	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C4	138804	broad.mit.edu	37	9	107289148	107289148	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C4	138804	broad.mit.edu	37	9	107288712	107288712	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C4	138804	broad.mit.edu	37	9	107289148	107289148	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C4	138804	broad.mit.edu	37	9	107288712	107288712	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C4	138804	broad.mit.edu	37	9	107289148	107289148	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C5	138799	broad.mit.edu	37	9	107361248	107361248	+	Missense_Mutation	SNP	C	A	A	rs141723124	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C5	138799	broad.mit.edu	37	9	107361248	107361248	+	Missense_Mutation	SNP	C	A	A	rs141723124	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR13C5	138799	broad.mit.edu	37	9	107361248	107361248	+	Missense_Mutation	SNP	C	A	A	rs141723124	byFrequency	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14A16	284532	broad.mit.edu	37	1	247978554	247978554	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14A16	284532	broad.mit.edu	37	1	247978554	247978554	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR14A16	284532	broad.mit.edu	37	1	247978554	247978554	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1J4	26219	broad.mit.edu	37	9	125281931	125281931	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1J4	26219	broad.mit.edu	37	9	125281931	125281931	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1J4	26219	broad.mit.edu	37	9	125281931	125281931	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1N2	138882	broad.mit.edu	37	9	125315646	125315646	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1N2	138882	broad.mit.edu	37	9	125315646	125315646	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1N2	138882	broad.mit.edu	37	9	125315646	125315646	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B11	127623	broad.mit.edu	37	1	247614463	247614463	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B11	127623	broad.mit.edu	37	1	247614463	247614463	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2B11	127623	broad.mit.edu	37	1	247614463	247614463	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695356	247695356	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695358	247695358	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695356	247695356	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695358	247695358	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695356	247695356	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2C3	81472	broad.mit.edu	37	1	247695358	247695358	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2F2	135948	broad.mit.edu	37	7	143633070	143633070	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2F2	135948	broad.mit.edu	37	7	143633070	143633070	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2F2	135948	broad.mit.edu	37	7	143633070	143633070	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247752128	247752128	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247752128	247752128	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G2	81470	broad.mit.edu	37	1	247752128	247752128	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G3	81469	broad.mit.edu	37	1	247769640	247769640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G3	81469	broad.mit.edu	37	1	247769640	247769640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G3	81469	broad.mit.edu	37	1	247769640	247769640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2G6	391211	broad.mit.edu	37	1	248685280	248685280	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2J2	26707	broad.mit.edu	37	6	29141790	29141790	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2J2	26707	broad.mit.edu	37	6	29141790	29141790	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2K2	26248	broad.mit.edu	37	9	114090593	114090593	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248099995	248099995	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248099995	248099995	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248185308	248185308	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248099833	248099833	+	5'Flank	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248099995	248099995	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248185308	248185308	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248247802	248247802	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224532	248224532	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224532	248224532	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224532	248224532	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M3	127062	broad.mit.edu	37	1	248366271	248366271	+	5'Flank	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M3	127062	broad.mit.edu	37	1	248366271	248366271	+	5'Flank	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M3	127062	broad.mit.edu	37	1	248366271	248366271	+	5'Flank	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487614	248487614	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487866	248487866	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487614	248487614	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487866	248487866	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487614	248487614	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487866	248487866	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T10	127069	broad.mit.edu	37	1	248756948	248756948	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T10	127069	broad.mit.edu	37	1	248756948	248756948	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T10	127069	broad.mit.edu	37	1	248756948	248756948	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T1	26696	broad.mit.edu	37	1	248569631	248569631	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T34	127068	broad.mit.edu	37	1	248737445	248737445	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T34	127068	broad.mit.edu	37	1	248737445	248737445	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T6	254879	broad.mit.edu	37	1	248551410	248551410	+	Silent	SNP	G	T	T	rs80259157	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T6	254879	broad.mit.edu	37	1	248551410	248551410	+	Silent	SNP	G	T	T	rs80259157	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T6	254879	broad.mit.edu	37	1	248551410	248551410	+	Silent	SNP	G	T	T	rs80259157	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T8	343172	broad.mit.edu	37	1	248084416	248084416	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T8	343172	broad.mit.edu	37	1	248084416	248084416	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2T8	343172	broad.mit.edu	37	1	248084416	248084416	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059311	248059311	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059622	248059622	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059311	248059311	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059622	248059622	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059311	248059311	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2W3	343171	broad.mit.edu	37	1	248059622	248059622	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR3A3	8392	broad.mit.edu	37	17	3324705	3324705	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR3A3	8392	broad.mit.edu	37	17	3324705	3324705	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A15	81328	broad.mit.edu	37	11	55135664	55135664	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A15	81328	broad.mit.edu	37	11	55135664	55135664	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4A15	81328	broad.mit.edu	37	11	55135664	55135664	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4B1	119765	broad.mit.edu	37	11	48238932	48238932	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D5	219875	broad.mit.edu	37	11	123810656	123810656	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D5	219875	broad.mit.edu	37	11	123810656	123810656	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D5	219875	broad.mit.edu	37	11	123810656	123810656	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D6	219983	broad.mit.edu	37	11	59224639	59224639	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D6	219983	broad.mit.edu	37	11	59224639	59224639	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D6	219983	broad.mit.edu	37	11	59224639	59224639	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4D9	390199	broad.mit.edu	37	11	59282792	59282792	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4L1	122742	broad.mit.edu	37	14	20528425	20528425	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4L1	122742	broad.mit.edu	37	14	20528425	20528425	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4L1	122742	broad.mit.edu	37	14	20528425	20528425	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22383507	22383507	+	3'UTR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22383507	22383507	+	3'UTR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51D1	390038	broad.mit.edu	37	11	4661635	4661635	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51D1	390038	broad.mit.edu	37	11	4661635	4661635	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51D1	390038	broad.mit.edu	37	11	4661635	4661635	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51Q1	390061	broad.mit.edu	37	11	5444315	5444315	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51Q1	390061	broad.mit.edu	37	11	5444315	5444315	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52B4	143496	broad.mit.edu	37	11	4389399	4389399	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52B4	143496	broad.mit.edu	37	11	4389399	4389399	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52B4	143496	broad.mit.edu	37	11	4389399	4389399	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52K1	390036	broad.mit.edu	37	11	4510989	4510989	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52K1	390036	broad.mit.edu	37	11	4510989	4510989	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52K1	390036	broad.mit.edu	37	11	4510989	4510989	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D14	219436	broad.mit.edu	37	11	55563649	55563649	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D14	219436	broad.mit.edu	37	11	55563649	55563649	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5D14	219436	broad.mit.edu	37	11	55563649	55563649	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5F1	338674	broad.mit.edu	37	11	55762106	55762106	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5F1	338674	broad.mit.edu	37	11	55762106	55762106	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5F1	338674	broad.mit.edu	37	11	55762106	55762106	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K1	26339	broad.mit.edu	37	3	98188534	98188534	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K1	26339	broad.mit.edu	37	3	98188534	98188534	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K1	26339	broad.mit.edu	37	3	98188534	98188534	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K3	403277	broad.mit.edu	37	3	98110266	98110266	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K3	403277	broad.mit.edu	37	3	98110266	98110266	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K3	403277	broad.mit.edu	37	3	98110266	98110266	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T2	219464	broad.mit.edu	37	11	56000765	56000765	+	5'Flank	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T2	219464	broad.mit.edu	37	11	56000765	56000765	+	5'Flank	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5T2	219464	broad.mit.edu	37	11	56000765	56000765	+	5'Flank	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6B2	389090	broad.mit.edu	37	2	240969840	240969840	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6B2	389090	broad.mit.edu	37	2	240969840	240969840	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6B2	389090	broad.mit.edu	37	2	240969840	240969840	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C1	390321	broad.mit.edu	37	12	55714510	55714510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C1	390321	broad.mit.edu	37	12	55714510	55714510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C1	390321	broad.mit.edu	37	12	55714510	55714510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6C6	283365	broad.mit.edu	37	12	55688351	55688351	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K2	81448	broad.mit.edu	37	1	158670253	158670253	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K2	81448	broad.mit.edu	37	1	158670253	158670253	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K2	81448	broad.mit.edu	37	1	158670253	158670253	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K3	391114	broad.mit.edu	37	1	158687393	158687393	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K3	391114	broad.mit.edu	37	1	158687393	158687393	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR6K3	391114	broad.mit.edu	37	1	158687393	158687393	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B12	219858	broad.mit.edu	37	11	124413479	124413479	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B12	219858	broad.mit.edu	37	11	124413479	124413479	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8B12	219858	broad.mit.edu	37	11	124413479	124413479	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J1	219477	broad.mit.edu	37	11	56128272	56128272	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J1	219477	broad.mit.edu	37	11	56128272	56128272	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J1	219477	broad.mit.edu	37	11	56128272	56128272	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9G4	283189	broad.mit.edu	37	11	56510307	56510307	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9G4	283189	broad.mit.edu	37	11	56510307	56510307	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR9G4	283189	broad.mit.edu	37	11	56510307	56510307	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL10	114884	broad.mit.edu	37	3	31710397	31710397	+	Intron	DEL	T	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24910524	24910524	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24910524	24910524	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL3	26031	broad.mit.edu	37	7	24910524	24910524	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL6	114880	broad.mit.edu	37	2	179259071	179259071	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL6	114880	broad.mit.edu	37	2	179259071	179259071	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL6	114880	broad.mit.edu	37	2	179259071	179259071	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSTF1	26578	broad.mit.edu	37	9	77749227	77749227	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSTF1	26578	broad.mit.edu	37	9	77749227	77749227	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSTF1	26578	broad.mit.edu	37	9	77749227	77749227	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21737980	21737980	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21747486	21747486	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21737980	21737980	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21747486	21747486	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOA	146183	broad.mit.edu	37	16	21737980	21737980	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26690191	26690191	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26696880	26696880	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26690191	26690191	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26696880	26696880	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26696880	26696880	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTP	23440	broad.mit.edu	37	5	76926342	76926342	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXA1L	5018	broad.mit.edu	37	14	23240419	23240419	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXA1L	5018	broad.mit.edu	37	14	23240419	23240419	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXA1L	5018	broad.mit.edu	37	14	23240419	23240419	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXR1	55074	broad.mit.edu	37	8	107751967	107751970	+	Intron	DEL	TTAA	-	-	rs34123736		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXSM	54995	broad.mit.edu	37	3	25835674	25835674	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXSM	54995	broad.mit.edu	37	3	25835674	25835674	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OXSM	54995	broad.mit.edu	37	3	25835674	25835674	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HB	5034	broad.mit.edu	37	17	79804555	79804555	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P4HB	5034	broad.mit.edu	37	17	79804555	79804555	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRGL	133015	broad.mit.edu	37	4	20706083	20706083	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRGL	133015	broad.mit.edu	37	4	20706083	20706083	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACRGL	133015	broad.mit.edu	37	4	20706083	20706083	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS1	55690	broad.mit.edu	37	11	66001697	66001697	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS1	55690	broad.mit.edu	37	11	66001697	66001697	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS1	55690	broad.mit.edu	37	11	66001697	66001697	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI3	51702	broad.mit.edu	37	1	17596639	17596639	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI3	51702	broad.mit.edu	37	1	17596639	17596639	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI3	51702	broad.mit.edu	37	1	17596639	17596639	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAGE5	90737	broad.mit.edu	37	X	55247100	55247100	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1	5058	broad.mit.edu	37	11	77085292	77085292	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1	5058	broad.mit.edu	37	11	77085292	77085292	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK1	5058	broad.mit.edu	37	11	77085292	77085292	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALB2	79728	broad.mit.edu	37	16	23634330	23634330	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALB2	79728	broad.mit.edu	37	16	23634330	23634330	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PALB2	79728	broad.mit.edu	37	16	23634330	23634330	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176525673	176525673	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176525673	176525673	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176525673	176525673	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAPPA2	60676	broad.mit.edu	37	1	176734882	176734882	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAQR9	344838	broad.mit.edu	37	3	142681802	142681802	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAQR9	344838	broad.mit.edu	37	3	142681802	142681802	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAQR9	344838	broad.mit.edu	37	3	142681802	142681802	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP8	79668	broad.mit.edu	37	5	50091127	50091127	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP8	79668	broad.mit.edu	37	5	50091127	50091127	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP8	79668	broad.mit.edu	37	5	50091127	50091127	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARVG	64098	broad.mit.edu	37	22	44585218	44585218	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARVG	64098	broad.mit.edu	37	22	44585218	44585218	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAXIP1	22976	broad.mit.edu	37	7	154775016	154775016	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAXIP1	22976	broad.mit.edu	37	7	154775016	154775016	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAXIP1	22976	broad.mit.edu	37	7	154775016	154775016	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP3	54039	broad.mit.edu	37	21	47329246	47329246	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP3	54039	broad.mit.edu	37	21	47350783	47350783	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP3	54039	broad.mit.edu	37	21	47329246	47329246	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP3	54039	broad.mit.edu	37	21	47350783	47350783	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCBP3	54039	broad.mit.edu	37	21	47329246	47329246	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134084177	134084177	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134084177	134084177	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH10	57575	broad.mit.edu	37	4	134084177	134084177	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91237944	91237944	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91456340	91456340	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91237944	91237944	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91456340	91456340	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91237944	91237944	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH11X	27328	broad.mit.edu	37	X	91456340	91456340	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55996851	55996851	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56138765	56138765	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56138765	56138765	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56138765	56138765	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58209184	58209184	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58209184	58209184	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH17	27253	broad.mit.edu	37	13	58209184	58209184	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH18	54510	broad.mit.edu	37	4	138450002	138450002	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH18	54510	broad.mit.edu	37	4	138450002	138450002	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH18	54510	broad.mit.edu	37	4	138450002	138450002	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140255192	140255192	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140255192	140255192	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA12	56137	broad.mit.edu	37	5	140255192	140255192	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA13	56136	broad.mit.edu	37	5	140264058	140264058	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA13	56136	broad.mit.edu	37	5	140264058	140264058	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140181997	140181997	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140181997	140181997	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA3	56145	broad.mit.edu	37	5	140181997	140181997	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA8	56140	broad.mit.edu	37	5	140222743	140222743	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA8	56140	broad.mit.edu	37	5	140222743	140222743	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHA8	56140	broad.mit.edu	37	5	140222743	140222743	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB4	56131	broad.mit.edu	37	5	140504017	140504017	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB4	56131	broad.mit.edu	37	5	140504017	140504017	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB4	56131	broad.mit.edu	37	5	140504017	140504017	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140553818	140553818	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140553818	140553818	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB7	56129	broad.mit.edu	37	5	140553818	140553818	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB8	56128	broad.mit.edu	37	5	140559208	140559208	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB8	56128	broad.mit.edu	37	5	140559208	140559208	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB8	56128	broad.mit.edu	37	5	140559208	140559208	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA1	56114	broad.mit.edu	37	5	140712339	140712339	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA1	56114	broad.mit.edu	37	5	140712339	140712339	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA1	56114	broad.mit.edu	37	5	140712339	140712339	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA8	9708	broad.mit.edu	37	5	140773147	140773147	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA8	9708	broad.mit.edu	37	5	140774234	140774234	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA8	9708	broad.mit.edu	37	5	140773147	140773147	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA8	9708	broad.mit.edu	37	5	140774234	140774234	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA8	9708	broad.mit.edu	37	5	140773147	140773147	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA9	56107	broad.mit.edu	37	5	140783353	140783353	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA9	56107	broad.mit.edu	37	5	140784676	140784676	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA9	56107	broad.mit.edu	37	5	140783353	140783353	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA9	56107	broad.mit.edu	37	5	140784676	140784676	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA9	56107	broad.mit.edu	37	5	140783353	140783353	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA9	56107	broad.mit.edu	37	5	140784676	140784676	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82387821	82387821	+	3'UTR	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82453745	82453745	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82387821	82387821	+	3'UTR	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82453745	82453745	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82387821	82387821	+	3'UTR	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCM1	5108	broad.mit.edu	37	8	17868211	17868211	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK9	255738	broad.mit.edu	37	1	55512125	55512125	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK9	255738	broad.mit.edu	37	1	55512125	55512125	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK9	255738	broad.mit.edu	37	1	55512125	55512125	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYT1B	9468	broad.mit.edu	37	X	24597530	24597530	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYT1B	9468	broad.mit.edu	37	X	24597530	24597530	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCYT1B	9468	broad.mit.edu	37	X	24597530	24597530	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE2A	5138	broad.mit.edu	37	11	72307581	72307581	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE2A	5138	broad.mit.edu	37	11	72307581	72307581	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3B	5140	broad.mit.edu	37	11	14793554	14793554	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3B	5140	broad.mit.edu	37	11	14793554	14793554	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4C	5143	broad.mit.edu	37	19	18330265	18330265	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4C	5143	broad.mit.edu	37	19	18330265	18330265	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144854300	144854300	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6C	5146	broad.mit.edu	37	10	95425130	95425130	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6C	5146	broad.mit.edu	37	10	95425130	95425130	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE6C	5146	broad.mit.edu	37	10	95425130	95425130	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8B	8622	broad.mit.edu	37	5	76607850	76607850	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE9A	5152	broad.mit.edu	37	21	44119001	44119001	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE9A	5152	broad.mit.edu	37	21	44119001	44119001	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE9A	5152	broad.mit.edu	37	21	44119001	44119001	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFA	5154	broad.mit.edu	37	7	540753	540753	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFA	5154	broad.mit.edu	37	7	540753	540753	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFA	5154	broad.mit.edu	37	7	540753	540753	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55124843	55124843	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55124843	55124843	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDGFRA	5156	broad.mit.edu	37	4	55124843	55124843	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHX	8050	broad.mit.edu	37	11	34937775	34937775	+	Translation_Start_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDHX	8050	broad.mit.edu	37	11	34937775	34937775	+	Translation_Start_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA2	64714	broad.mit.edu	37	16	333356	333356	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA2	64714	broad.mit.edu	37	16	333356	333356	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA5	10954	broad.mit.edu	37	3	122829931	122829931	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDIA5	10954	broad.mit.edu	37	3	122829931	122829931	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDILT	204474	broad.mit.edu	37	16	20380897	20380897	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDILT	204474	broad.mit.edu	37	16	20380897	20380897	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDILT	204474	broad.mit.edu	37	16	20380897	20380897	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDPR	55066	broad.mit.edu	37	16	70179942	70179942	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDS5B	23047	broad.mit.edu	37	13	33320130	33320130	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	31908857	31908857	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	31908857	31908857	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD2	23037	broad.mit.edu	37	5	31908857	31908857	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD4	57595	broad.mit.edu	37	X	153068740	153068740	+	3'UTR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD9	255762	broad.mit.edu	37	16	21999929	21999929	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD9	255762	broad.mit.edu	37	16	21999929	21999929	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZD9	255762	broad.mit.edu	37	16	21999929	21999929	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73432850	73432850	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73432940	73432940	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73432850	73432850	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73432940	73432940	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73673725	73673725	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73432850	73432850	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN3	23024	broad.mit.edu	37	3	73432940	73432940	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN4	29951	broad.mit.edu	37	12	41587845	41587845	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDZRN4	29951	broad.mit.edu	37	12	41587845	41587845	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PECR	55825	broad.mit.edu	37	2	216923646	216923646	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PECR	55825	broad.mit.edu	37	2	216923646	216923646	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PECR	55825	broad.mit.edu	37	2	216923646	216923646	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI1	57162	broad.mit.edu	37	2	64335371	64335371	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI1	57162	broad.mit.edu	37	2	64335371	64335371	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PELI1	57162	broad.mit.edu	37	2	64335371	64335371	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER1	5187	broad.mit.edu	37	17	8047245	8047245	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER1	5187	broad.mit.edu	37	17	8047245	8047245	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER1	5187	broad.mit.edu	37	17	8047245	8047245	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER3	8863	broad.mit.edu	37	1	7870084	7870084	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER3	8863	broad.mit.edu	37	1	7870084	7870084	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER3	8863	broad.mit.edu	37	1	7870084	7870084	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PET112L	5188	broad.mit.edu	37	4	152682170	152682170	+	5'Flank	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PET112L	5188	broad.mit.edu	37	4	152682170	152682170	+	5'Flank	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PET112L	5188	broad.mit.edu	37	4	152601093	152601093	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PET112L	5188	broad.mit.edu	37	4	152682170	152682170	+	5'Flank	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX16	9409	broad.mit.edu	37	11	45937218	45937218	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX16	9409	broad.mit.edu	37	11	45937218	45937218	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX16	9409	broad.mit.edu	37	11	45937218	45937218	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX2	5828	broad.mit.edu	37	8	77895335	77895335	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX2	5828	broad.mit.edu	37	8	77895335	77895335	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179529714	179529714	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179529714	179529714	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179529714	179529714	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PEX5L	51555	broad.mit.edu	37	3	179576912	179576912	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB3	5209	broad.mit.edu	37	10	6261767	6261767	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PFKFB3	5209	broad.mit.edu	37	10	6261767	6261767	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGF	5228	broad.mit.edu	37	14	75415338	75415338	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PGF	5228	broad.mit.edu	37	14	75415338	75415338	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58348406	58348406	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58348406	58348406	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHACTR3	116154	broad.mit.edu	37	20	58348406	58348406	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22051348	22051348	+	Intron	SNP	G	C	C	rs141775674	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHEX	5251	broad.mit.edu	37	X	22051348	22051348	+	Intron	SNP	G	C	C	rs141775674	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF14	9678	broad.mit.edu	37	7	11022088	11022088	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF14	9678	broad.mit.edu	37	7	11068427	11068427	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF14	9678	broad.mit.edu	37	7	11068427	11068427	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF14	9678	broad.mit.edu	37	7	11022088	11022088	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF14	9678	broad.mit.edu	37	7	11068427	11068427	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF21A	51317	broad.mit.edu	37	11	45975093	45975093	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF21A	51317	broad.mit.edu	37	11	45975093	45975093	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF21A	51317	broad.mit.edu	37	11	45975093	45975093	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHGDH	26227	broad.mit.edu	37	1	120266093	120266093	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHGDH	26227	broad.mit.edu	37	1	120266093	120266093	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHGDH	26227	broad.mit.edu	37	1	120266093	120266093	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDA1	22822	broad.mit.edu	37	12	76424788	76424788	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDA1	22822	broad.mit.edu	37	12	76424788	76424788	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDA1	22822	broad.mit.edu	37	12	76424788	76424788	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHOX2B	8929	broad.mit.edu	37	4	41750472	41750472	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHOX2B	8929	broad.mit.edu	37	4	41750472	41750472	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHOX2B	8929	broad.mit.edu	37	4	41750472	41750472	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHOX2B	8929	broad.mit.edu	37	4	41750491	41750491	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151288658	151288658	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151288658	151288658	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151288658	151288658	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS2	9063	broad.mit.edu	37	18	44426603	44426603	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS2	9063	broad.mit.edu	37	18	44426603	44426603	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS2	9063	broad.mit.edu	37	18	44426603	44426603	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2B	5287	broad.mit.edu	37	1	204416817	204416817	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2B	5287	broad.mit.edu	37	1	204416817	204416817	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PION	54103	broad.mit.edu	37	7	76983010	76983010	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PION	54103	broad.mit.edu	37	7	76983010	76983010	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PION	54103	broad.mit.edu	37	7	76983010	76983010	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP4K2B	8396	broad.mit.edu	37	17	36935738	36935738	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP4K2B	8396	broad.mit.edu	37	17	36935738	36935738	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP4K2B	8396	broad.mit.edu	37	17	36935738	36935738	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1A	8394	broad.mit.edu	37	1	151204252	151204252	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1A	8394	broad.mit.edu	37	1	151204252	151204252	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1A	8394	broad.mit.edu	37	1	151204252	151204252	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1P1	206426	broad.mit.edu	37	6	7987116	7987116	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1P1	206426	broad.mit.edu	37	6	7987116	7987116	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1P1	206426	broad.mit.edu	37	6	7987116	7987116	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNC1	26207	broad.mit.edu	37	17	65467727	65467727	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PITPNC1	26207	broad.mit.edu	37	17	65688809	65688809	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47925686	47925686	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47925686	47925686	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47925686	47925686	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1	5310	broad.mit.edu	37	16	2162319	2162319	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1	5310	broad.mit.edu	37	16	2162319	2162319	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102053176	102053176	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102053176	102053176	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD2L1	9033	broad.mit.edu	37	10	102053176	102053176	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110478928	110478928	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110478928	110478928	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1L1	93035	broad.mit.edu	37	8	110478928	110478928	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51934348	51934348	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51934348	51934348	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51934348	51934348	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKIB	5570	broad.mit.edu	37	6	123039187	123039187	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX2	63876	broad.mit.edu	37	11	125267645	125267645	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX2	63876	broad.mit.edu	37	11	125299921	125299921	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX2	63876	broad.mit.edu	37	11	125267645	125267645	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX2	63876	broad.mit.edu	37	11	125299921	125299921	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX2	63876	broad.mit.edu	37	11	125267645	125267645	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKNOX2	63876	broad.mit.edu	37	11	125299921	125299921	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159518087	159518087	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159518087	159518087	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKP4	8502	broad.mit.edu	37	2	159518087	159518087	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G5	5322	broad.mit.edu	37	1	20416397	20416397	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G5	5322	broad.mit.edu	37	1	20416397	20416397	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G5	5322	broad.mit.edu	37	1	20416397	20416397	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2R1	22925	broad.mit.edu	37	2	160826641	160826641	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28815741	28815741	+	Intron	SNP	C	T	T	rs140245093	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28821733	28821733	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28855858	28855858	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28855888	28855888	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28815741	28815741	+	Intron	SNP	C	T	T	rs140245093	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28821733	28821733	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28855858	28855858	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28855888	28855888	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28821733	28821733	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28843772	28843772	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28855858	28855858	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLB1	151056	broad.mit.edu	37	2	28855888	28855888	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8352142	8352142	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8770893	8770894	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8352142	8352142	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8770893	8770894	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8352142	8352142	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB1	23236	broad.mit.edu	37	20	8770893	8770894	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCD4	84812	broad.mit.edu	37	2	219492945	219492945	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCD4	84812	broad.mit.edu	37	2	219492945	219492945	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCD4	84812	broad.mit.edu	37	2	219492945	219492945	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96005857	96005858	+	Missense_Mutation	DNP	CA	AG	AG			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96005857	96005858	+	Missense_Mutation	DNP	CA	AG	AG			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCE1	51196	broad.mit.edu	37	10	96005857	96005858	+	Missense_Mutation	DNP	CA	AG	AG			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD3	345557	broad.mit.edu	37	5	41510644	41510644	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD3	345557	broad.mit.edu	37	5	41510644	41510644	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCXD3	345557	broad.mit.edu	37	5	41510644	41510644	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145007615	145007615	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	144992681	144992681	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145007615	145007615	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	145049201	145049201	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131935720	131935720	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	132066684	132066684	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131935720	131935720	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	132066684	132066684	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	131935720	131935720	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHB2	55041	broad.mit.edu	37	2	132066684	132066684	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG3	26030	broad.mit.edu	37	14	65208508	65208508	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHG3	26030	broad.mit.edu	37	14	65208508	65208508	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH2	130271	broad.mit.edu	37	2	43937477	43937477	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH2	130271	broad.mit.edu	37	2	43937477	43937477	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHH2	130271	broad.mit.edu	37	2	43937477	43937477	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131844132	131844132	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131866251	131866251	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131844132	131844132	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131866251	131866251	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	131866251	131866251	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129279567	129279567	+	Splice_Site	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129279567	129279567	+	Splice_Site	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXND1	23129	broad.mit.edu	37	3	129279567	129279567	+	Splice_Site	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMM2	5373	broad.mit.edu	37	16	8906839	8906839	+	Intron	DEL	A	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMM2	5373	broad.mit.edu	37	16	8906839	8906839	+	Intron	DEL	A	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMM2	5373	broad.mit.edu	37	16	8906839	8906839	+	Intron	DEL	A	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2CL	441194	broad.mit.edu	37	7	6758038	6758038	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2CL	441194	broad.mit.edu	37	7	6758038	6758038	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2CL	441194	broad.mit.edu	37	7	6758038	6758038	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118225391	118225391	+	Intron	SNP	C	G	G	rs113265812	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNLIPRP3	119548	broad.mit.edu	37	10	118225391	118225391	+	Intron	SNP	C	G	G	rs113265812	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLDIP3	84271	broad.mit.edu	37	22	42981234	42981234	+	3'UTR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLDIP3	84271	broad.mit.edu	37	22	42981234	42981234	+	3'UTR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121209249	121209249	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121209249	121209249	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLQ	10721	broad.mit.edu	37	3	121209249	121209249	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR3K	51728	broad.mit.edu	37	16	97680	97680	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38154929	38154929	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38154929	38154929	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38154929	38154929	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124511120	124511120	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124511120	124511120	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124511120	124511120	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEG	404785	broad.mit.edu	37	14	19573004	19573004	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEG	404785	broad.mit.edu	37	14	19573004	19573004	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF1	5475	broad.mit.edu	37	X	18824741	18824741	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF1	5475	broad.mit.edu	37	X	18824741	18824741	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPEF1	5475	broad.mit.edu	37	X	18824741	18824741	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27787877	27787877	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27799117	27799117	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIF	10105	broad.mit.edu	37	10	81108691	81108691	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIF	10105	broad.mit.edu	37	10	81108691	81108691	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIH	10465	broad.mit.edu	37	1	43126519	43126519	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIH	10465	broad.mit.edu	37	1	43126519	43126519	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIH	10465	broad.mit.edu	37	1	43126519	43126519	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIL2	23759	broad.mit.edu	37	22	22048981	22048981	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIL2	23759	broad.mit.edu	37	22	22048981	22048981	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPL	5493	broad.mit.edu	37	16	4947649	4947649	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPL	5493	broad.mit.edu	37	16	4947649	4947649	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R12B	4660	broad.mit.edu	37	1	202398051	202398051	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R12B	4660	broad.mit.edu	37	1	202400955	202400955	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R12B	4660	broad.mit.edu	37	1	202398051	202398051	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R12B	4660	broad.mit.edu	37	1	202400955	202400955	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R12B	4660	broad.mit.edu	37	1	202398051	202398051	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R13L	10848	broad.mit.edu	37	19	45895689	45895689	+	Intron	SNP	T	A	A	rs35239998	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1A	5518	broad.mit.edu	37	19	52719903	52719903	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1A	5518	broad.mit.edu	37	19	52719903	52719903	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R1A	5518	broad.mit.edu	37	19	52719903	52719903	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146086738	146086738	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146086738	146086738	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	145979967	145979967	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP2R2B	5521	broad.mit.edu	37	5	146086738	146086738	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP3R2	5535	broad.mit.edu	37	9	104356802	104356802	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP3R2	5535	broad.mit.edu	37	9	104356802	104356802	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP3R2	5535	broad.mit.edu	37	9	104356802	104356802	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R4	57718	broad.mit.edu	37	14	94731788	94731788	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R4	57718	broad.mit.edu	37	14	94731788	94731788	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP4R4	57718	broad.mit.edu	37	14	94731788	94731788	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP5C	5536	broad.mit.edu	37	19	46888251	46888251	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP5C	5536	broad.mit.edu	37	19	46888251	46888251	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPYR1	5540	broad.mit.edu	37	10	47087209	47087209	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPYR1	5540	broad.mit.edu	37	10	47087209	47087209	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPYR1	5540	broad.mit.edu	37	10	47087209	47087209	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF18	391003	broad.mit.edu	37	1	13474988	13474988	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF18	391003	broad.mit.edu	37	1	13474988	13474988	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRB1	5542	broad.mit.edu	37	12	11506229	11506231	+	In_Frame_Del	DEL	TGC	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM15	63977	broad.mit.edu	37	21	43279669	43279669	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM15	63977	broad.mit.edu	37	21	43279669	43279669	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM15	63977	broad.mit.edu	37	21	43279669	43279669	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM16	63976	broad.mit.edu	37	1	3328631	3328631	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM16	63976	broad.mit.edu	37	1	3328631	3328631	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121631535	121631535	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121737750	121737750	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121631535	121631535	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121737750	121737750	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121631535	121631535	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM5	11107	broad.mit.edu	37	4	121737750	121737750	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23522648	23522648	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23522648	23522648	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRDM9	56979	broad.mit.edu	37	5	23522648	23522648	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRELP	5549	broad.mit.edu	37	1	203452395	203452395	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRELP	5549	broad.mit.edu	37	1	203452395	203452395	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRELP	5549	broad.mit.edu	37	1	203452395	203452395	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24046867	24046867	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24196565	24196565	+	Intron	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24046867	24046867	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24196565	24196565	+	Intron	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24046867	24046867	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24196565	24196565	+	Intron	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30095616	30095616	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30133065	30133065	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30095616	30095616	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30133065	30133065	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKD1	5587	broad.mit.edu	37	14	30133065	30133065	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48744518	48744518	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48744518	48744518	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKDC	5591	broad.mit.edu	37	8	48744518	48744518	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRLHR	2834	broad.mit.edu	37	10	120354908	120354908	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROC	5624	broad.mit.edu	37	2	128183674	128183674	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROC	5624	broad.mit.edu	37	2	128183674	128183674	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM2	150696	broad.mit.edu	37	2	95945675	95945675	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM2	150696	broad.mit.edu	37	2	95945675	95945675	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PROM2	150696	broad.mit.edu	37	2	95945675	95945675	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF31	26121	broad.mit.edu	37	19	54625417	54625417	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF38B	55119	broad.mit.edu	37	1	109241225	109241225	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF38B	55119	broad.mit.edu	37	1	109241225	109241225	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF38B	55119	broad.mit.edu	37	1	109241225	109241225	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPS1L1	221823	broad.mit.edu	37	7	18067033	18067033	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPS1L1	221823	broad.mit.edu	37	7	18067033	18067033	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPS1L1	221823	broad.mit.edu	37	7	18067033	18067033	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR12	57479	broad.mit.edu	37	19	50099833	50099833	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR12	57479	broad.mit.edu	37	19	50099833	50099833	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR16	51334	broad.mit.edu	37	5	120022158	120022158	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR16	51334	broad.mit.edu	37	5	120022158	120022158	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR16	51334	broad.mit.edu	37	5	120022158	120022158	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS3	5646	broad.mit.edu	37	9	33786548	33786548	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS3	5646	broad.mit.edu	37	9	33786548	33786548	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRSS3	5646	broad.mit.edu	37	9	33786548	33786548	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79468996	79468996	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79468996	79468996	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79234264	79234264	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79468996	79468996	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD	5662	broad.mit.edu	37	10	104173662	104173662	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD	5662	broad.mit.edu	37	10	104173662	104173662	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSD	5662	broad.mit.edu	37	10	104173662	104173662	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43421981	43421981	+	5'UTR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43430513	43430513	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43528753	43528753	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43601538	43601538	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43421981	43421981	+	5'UTR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43430513	43430513	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43528753	43528753	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43421981	43421981	+	5'UTR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43430513	43430513	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43528753	43528753	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43601385	43601385	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43601538	43601538	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG7	5676	broad.mit.edu	37	19	43430713	43430713	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG7	5676	broad.mit.edu	37	19	43430713	43430713	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG7	5676	broad.mit.edu	37	19	43430713	43430713	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA6	5687	broad.mit.edu	37	14	35761599	35761599	+	5'UTR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSMA6	5687	broad.mit.edu	37	14	35761599	35761599	+	5'UTR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTAFR	5724	broad.mit.edu	37	1	28476668	28476668	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTAFR	5724	broad.mit.edu	37	1	28476668	28476668	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTAFR	5724	broad.mit.edu	37	1	28476668	28476668	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11574545	11574545	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11594437	11594437	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11574545	11574545	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11594437	11594437	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11574545	11574545	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11594437	11594437	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117509740	117509740	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117509740	117509740	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFRN	5738	broad.mit.edu	37	1	117509740	117509740	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFR	5737	broad.mit.edu	37	1	78959150	78959150	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFR	5737	broad.mit.edu	37	1	78959150	78959150	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGFR	5737	broad.mit.edu	37	1	78959150	78959150	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGS1	5742	broad.mit.edu	37	9	125149046	125149046	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGS1	5742	broad.mit.edu	37	9	125149046	125149046	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTGS1	5742	broad.mit.edu	37	9	125149046	125149046	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH1R	5745	broad.mit.edu	37	3	46944739	46944739	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH1R	5745	broad.mit.edu	37	3	46944739	46944739	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209302554	209302554	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209302554	209302554	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTH2R	5746	broad.mit.edu	37	2	209302554	209302554	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18754824	18754824	+	Silent	SNP	C	A	A	rs116891792	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18754824	18754824	+	Silent	SNP	C	A	A	rs116891792	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18754824	18754824	+	Silent	SNP	C	A	A	rs116891792	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198723577	198723577	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198723577	198723577	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRC	5788	broad.mit.edu	37	1	198723577	198723577	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8376746	8376746	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8460541	8460541	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8484043	8484043	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8376746	8376746	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8460541	8460541	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8484043	8484043	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8376746	8376746	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8460541	8460541	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8484043	8484043	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRF	5792	broad.mit.edu	37	1	44084819	44084819	+	Missense_Mutation	SNP	G	A	A	rs70937045		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRF	5792	broad.mit.edu	37	1	44084819	44084819	+	Missense_Mutation	SNP	G	A	A	rs70937045		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRF	5792	broad.mit.edu	37	1	44084819	44084819	+	Missense_Mutation	SNP	G	A	A	rs70937045		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRG	5793	broad.mit.edu	37	3	62248420	62248420	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRG	5793	broad.mit.edu	37	3	62248420	62248420	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRG	5793	broad.mit.edu	37	3	61728162	61728162	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRG	5793	broad.mit.edu	37	3	62248420	62248420	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRN2	5799	broad.mit.edu	37	7	157341534	157341534	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRS	5802	broad.mit.edu	37	19	5239112	5239113	+	Intron	DEL	GA	-	-	rs36155090		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40790290	40790290	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRT	11122	broad.mit.edu	37	20	40790290	40790290	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121623757	121623757	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121623757	121623757	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121623757	121623757	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM2	23369	broad.mit.edu	37	2	20482749	20482749	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM2	23369	broad.mit.edu	37	2	20482749	20482749	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM2	23369	broad.mit.edu	37	2	20482749	20482749	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52252002	52252002	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52370247	52370247	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDN	7837	broad.mit.edu	37	2	1653089	1653089	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QTRT1	81890	broad.mit.edu	37	19	10822872	10822872	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QTRT1	81890	broad.mit.edu	37	19	10822872	10822872	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QTRT1	81890	broad.mit.edu	37	19	10822872	10822872	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM1	23518	broad.mit.edu	37	2	136393555	136393555	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM1	23518	broad.mit.edu	37	2	136393555	136393555	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM1	23518	broad.mit.edu	37	2	136393555	136393555	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM2	22864	broad.mit.edu	37	12	57661935	57661935	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
R3HDM2	22864	broad.mit.edu	37	12	57661935	57661935	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB15	376267	broad.mit.edu	37	14	65417768	65417768	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB21	23011	broad.mit.edu	37	12	72176542	72176542	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39B	116442	broad.mit.edu	37	X	154490316	154490316	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39B	116442	broad.mit.edu	37	X	154490316	154490316	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB39B	116442	broad.mit.edu	37	X	154490316	154490316	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3C	115827	broad.mit.edu	37	5	58120870	58120870	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3C	115827	broad.mit.edu	37	5	58120870	58120870	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3C	115827	broad.mit.edu	37	5	58120870	58120870	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220406172	220406172	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220406172	220406172	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB3GAP2	25782	broad.mit.edu	37	1	220406172	220406172	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGEF1	27342	broad.mit.edu	37	7	66264318	66264318	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGEF1	27342	broad.mit.edu	37	7	66264318	66264318	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGEF1	27342	broad.mit.edu	37	7	66264318	66264318	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABL3	285282	broad.mit.edu	37	3	120417341	120417341	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABL3	285282	broad.mit.edu	37	3	120417341	120417341	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABL3	285282	broad.mit.edu	37	3	120417341	120417341	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD23B	5887	broad.mit.edu	37	9	110086366	110086366	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD23B	5887	broad.mit.edu	37	9	110086366	110086366	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD23B	5887	broad.mit.edu	37	9	110086366	110086366	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36597537	36597537	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36597537	36597537	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAG1	5896	broad.mit.edu	37	11	36597537	36597537	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI14	26064	broad.mit.edu	37	5	34813772	34813772	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI14	26064	broad.mit.edu	37	5	34813772	34813772	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI14	26064	broad.mit.edu	37	5	34813772	34813772	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37163696	37163696	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37163696	37163696	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGAPB	57148	broad.mit.edu	37	20	37163696	37163696	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS1	9649	broad.mit.edu	37	9	129974501	129974501	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS1	9649	broad.mit.edu	37	9	129974501	129974501	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS1	9649	broad.mit.edu	37	9	129974501	129974501	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS2	55103	broad.mit.edu	37	1	178854254	178854255	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS2	55103	broad.mit.edu	37	1	178854254	178854255	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RALGPS2	55103	broad.mit.edu	37	1	178854254	178854255	+	Missense_Mutation	DNP	GG	CT	CT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANGAP1	5905	broad.mit.edu	37	22	41657531	41657531	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANGAP1	5905	broad.mit.edu	37	22	41657531	41657531	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RANGAP1	5905	broad.mit.edu	37	22	41657531	41657531	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP2	23108	broad.mit.edu	37	17	2935769	2935769	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP2	23108	broad.mit.edu	37	17	2935769	2935769	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAP1GAP2	23108	broad.mit.edu	37	17	2935769	2935769	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF2	9693	broad.mit.edu	37	4	160273941	160273941	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF2	9693	broad.mit.edu	37	4	160273941	160273941	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF2	9693	broad.mit.edu	37	4	160273941	160273941	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF3	10411	broad.mit.edu	37	12	48143570	48143570	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF3	10411	broad.mit.edu	37	12	48143570	48143570	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF3	10411	broad.mit.edu	37	12	48143570	48143570	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80408586	80408586	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80408635	80408635	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80408586	80408586	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80408635	80408635	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRF2	5924	broad.mit.edu	37	5	80408635	80408635	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF1	11186	broad.mit.edu	37	3	50368057	50368057	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF1	11186	broad.mit.edu	37	3	50368057	50368057	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF1	11186	broad.mit.edu	37	3	50368057	50368057	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF2	9770	broad.mit.edu	37	20	4770300	4770300	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF2	9770	broad.mit.edu	37	20	4770300	4770300	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF2	9770	broad.mit.edu	37	20	4770300	4770300	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAX	30062	broad.mit.edu	37	18	56940111	56940111	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAX	30062	broad.mit.edu	37	18	56940111	56940111	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP6	5930	broad.mit.edu	37	16	24578506	24578506	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP6	5930	broad.mit.edu	37	16	24578506	24578506	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP6	5930	broad.mit.edu	37	16	24576097	24576098	+	Intron	INS	-	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBBP6	5930	broad.mit.edu	37	16	24578506	24578506	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM44	375316	broad.mit.edu	37	2	238726701	238726701	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM44	375316	broad.mit.edu	37	2	238726701	238726701	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM44	375316	broad.mit.edu	37	2	238726701	238726701	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM47	54502	broad.mit.edu	37	4	40440430	40440430	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM47	54502	broad.mit.edu	37	4	40440430	40440430	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM47	54502	broad.mit.edu	37	4	40440430	40440430	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBM7	10179	broad.mit.edu	37	11	114276519	114276519	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPJL	11317	broad.mit.edu	37	20	43942877	43942877	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPJL	11317	broad.mit.edu	37	20	43942877	43942877	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBPJL	11317	broad.mit.edu	37	20	43942877	43942877	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCC2	55920	broad.mit.edu	37	1	17765004	17765004	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCC2	55920	broad.mit.edu	37	1	17765004	17765004	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH12	145226	broad.mit.edu	37	14	68192624	68192624	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH12	145226	broad.mit.edu	37	14	68192624	68192624	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH12	145226	broad.mit.edu	37	14	68192624	68192624	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH16	8608	broad.mit.edu	37	12	57345827	57345827	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH16	8608	broad.mit.edu	37	12	57351414	57351414	+	Translation_Start_Site	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH16	8608	broad.mit.edu	37	12	57345827	57345827	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH16	8608	broad.mit.edu	37	12	57351414	57351414	+	Translation_Start_Site	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RDH16	8608	broad.mit.edu	37	12	57345827	57345827	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1P	5969	broad.mit.edu	37	2	79362922	79362922	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG1P	5969	broad.mit.edu	37	2	79364020	79364020	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384784	79384784	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384784	79384784	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384728	79384728	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3A	5068	broad.mit.edu	37	2	79384784	79384784	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3G	130120	broad.mit.edu	37	2	79253988	79254003	+	Intron	DEL	TAGGGGAAAGTCCATG	-	-	rs117454068	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3G	130120	broad.mit.edu	37	2	79254918	79254918	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REG3G	130120	broad.mit.edu	37	2	79254918	79254918	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REV1	51455	broad.mit.edu	37	2	100058928	100058928	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC3	5983	broad.mit.edu	37	13	34404943	34404943	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC3	5983	broad.mit.edu	37	13	34404943	34404943	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFC3	5983	broad.mit.edu	37	13	34404943	34404943	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD3	55159	broad.mit.edu	37	16	74657793	74657793	+	3'UTR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD3	55159	broad.mit.edu	37	16	74657793	74657793	+	3'UTR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFWD3	55159	broad.mit.edu	37	16	74657793	74657793	+	3'UTR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107078752	107078752	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107078752	107078752	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX4	5992	broad.mit.edu	37	12	107078752	107078752	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFXANK	8625	broad.mit.edu	37	19	19304657	19304657	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFXANK	8625	broad.mit.edu	37	19	19304657	19304657	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFXANK	8625	broad.mit.edu	37	19	19304657	19304657	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RG9MTD2	93587	broad.mit.edu	37	4	100479469	100479469	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RG9MTD2	93587	broad.mit.edu	37	4	100479469	100479469	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL1	23179	broad.mit.edu	37	1	183853843	183853843	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL1	23179	broad.mit.edu	37	1	183853843	183853843	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGL1	23179	broad.mit.edu	37	1	183853843	183853843	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGNEF	64283	broad.mit.edu	37	5	73165952	73165952	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGNEF	64283	broad.mit.edu	37	5	73165952	73165952	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGNEF	64283	broad.mit.edu	37	5	73165952	73165952	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGNEF	64283	broad.mit.edu	37	5	73189085	73189085	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS21	431704	broad.mit.edu	37	1	192312066	192312066	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS21	431704	broad.mit.edu	37	1	192312066	192312066	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS21	431704	broad.mit.edu	37	1	192312066	192312066	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	101051202	101051202	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	101051202	101051202	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS22	26166	broad.mit.edu	37	8	101051202	101051202	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBG	57127	broad.mit.edu	37	1	156346892	156346892	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB2	23221	broad.mit.edu	37	8	22868122	22868122	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB2	23221	broad.mit.edu	37	8	22868122	22868122	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOBTB2	23221	broad.mit.edu	37	8	22868122	22868122	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOJ	57381	broad.mit.edu	37	14	63671738	63671738	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOJ	57381	broad.mit.edu	37	14	63671738	63671738	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHOJ	57381	broad.mit.edu	37	14	63671738	63671738	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38947422	38947422	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	39021164	39021164	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38947422	38947422	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	39021164	39021164	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	38947422	38947422	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RICTOR	253260	broad.mit.edu	37	5	39021164	39021164	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RILPL1	353116	broad.mit.edu	37	12	124007939	124007939	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RILPL1	353116	broad.mit.edu	37	12	124007939	124007939	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RILPL1	353116	broad.mit.edu	37	12	124007939	124007939	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS1	22999	broad.mit.edu	37	6	72806785	72806785	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS1	22999	broad.mit.edu	37	6	72806785	72806785	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS1	22999	broad.mit.edu	37	6	72806785	72806785	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104943527	104943527	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105026852	105026852	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104943527	104943527	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105026852	105026852	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	104943527	104943527	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMS2	9699	broad.mit.edu	37	8	105026852	105026852	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN3	79890	broad.mit.edu	37	14	93125370	93125370	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN3	79890	broad.mit.edu	37	14	93125370	93125370	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN3	79890	broad.mit.edu	37	14	93125370	93125370	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK2	55781	broad.mit.edu	37	5	96508994	96508994	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK2	55781	broad.mit.edu	37	5	96508994	96508994	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIOK2	55781	broad.mit.edu	37	5	96508994	96508994	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT2	6014	broad.mit.edu	37	18	40695491	40695491	+	5'UTR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT2	6014	broad.mit.edu	37	18	40695491	40695491	+	5'UTR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIT2	6014	broad.mit.edu	37	18	40695491	40695491	+	5'UTR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLTPR	146206	broad.mit.edu	37	16	67680671	67680671	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLTPR	146206	broad.mit.edu	37	16	67680671	67680671	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RLTPR	146206	broad.mit.edu	37	16	67681405	67681405	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMST	196475	broad.mit.edu	37	12	97885866	97885866	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMST	196475	broad.mit.edu	37	12	97885866	97885866	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RMST	196475	broad.mit.edu	37	12	97885866	97885866	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE2	6036	broad.mit.edu	37	14	21424254	21424254	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE2	6036	broad.mit.edu	37	14	21424254	21424254	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASE2	6036	broad.mit.edu	37	14	21424254	21424254	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF144A	9781	broad.mit.edu	37	2	7170389	7170394	+	Intron	DEL	TGTGTG	-	-	rs72180357		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF145	153830	broad.mit.edu	37	5	158630641	158630641	+	5'UTR	DEL	C	-	-	rs74841177		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF151	146310	broad.mit.edu	37	16	2018677	2018677	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25356050	25356050	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25356050	25356050	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25356050	25356050	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF216	54476	broad.mit.edu	37	7	5760560	5760560	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF216	54476	broad.mit.edu	37	7	5760560	5760560	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNH1	6050	broad.mit.edu	37	11	494979	494979	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNH1	6050	broad.mit.edu	37	11	494979	494979	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	78667283	78667283	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO1	6091	broad.mit.edu	37	3	78667283	78667283	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROCK1	6093	broad.mit.edu	37	18	18619672	18619672	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROPN1B	152015	broad.mit.edu	37	3	125691123	125691123	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROPN1B	152015	broad.mit.edu	37	3	125691123	125691123	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94486955	94486955	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94486955	94486955	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROR2	4920	broad.mit.edu	37	9	94486955	94486955	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10469886	10469886	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10469886	10469886	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10469886	10469886	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1	6101	broad.mit.edu	37	8	55538014	55538014	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1	6101	broad.mit.edu	37	8	55538014	55538014	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1	6101	broad.mit.edu	37	8	55538014	55538014	+	Missense_Mutation	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGRIP1	57096	broad.mit.edu	37	14	21813234	21813234	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGR	6103	broad.mit.edu	37	X	38146246	38146246	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGR	6103	broad.mit.edu	37	X	38146246	38146246	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPGR	6103	broad.mit.edu	37	X	38146246	38146246	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL24	6152	broad.mit.edu	37	3	101401235	101401235	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL24	6152	broad.mit.edu	37	3	101401235	101401235	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL24	6152	broad.mit.edu	37	3	101401235	101401235	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL26	6154	broad.mit.edu	37	17	8281101	8281101	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPL26	6154	broad.mit.edu	37	17	8281101	8281101	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KB1	6198	broad.mit.edu	37	17	58009173	58009173	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KL1	83694	broad.mit.edu	37	14	75376671	75376671	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KL1	83694	broad.mit.edu	37	14	75376671	75376671	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPS6KL1	83694	broad.mit.edu	37	14	75376671	75376671	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTOR	57521	broad.mit.edu	37	17	78854319	78854319	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTOR	57521	broad.mit.edu	37	17	78854319	78854319	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP12	23223	broad.mit.edu	37	10	99130131	99130131	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSL1D1	26156	broad.mit.edu	37	16	11935948	11935948	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSL1D1	26156	broad.mit.edu	37	16	11935948	11935948	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH10B2	728194	broad.mit.edu	37	7	6006564	6006564	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH10B2	728194	broad.mit.edu	37	7	6006564	6006564	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH9	221421	broad.mit.edu	37	6	43623573	43623573	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPH9	221421	broad.mit.edu	37	6	43623573	43623573	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPO2	340419	broad.mit.edu	37	8	109001368	109001368	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPO2	340419	broad.mit.edu	37	8	109001368	109001368	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RSPO2	340419	broad.mit.edu	37	8	109001368	109001368	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTEL1	51750	broad.mit.edu	37	20	62294126	62294126	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTEL1	51750	broad.mit.edu	37	20	62305089	62305089	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTEL1	51750	broad.mit.edu	37	20	62312042	62312042	+	Silent	SNP	C	T	T	rs141241780		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTEL1	51750	broad.mit.edu	37	20	62294126	62294126	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTEL1	51750	broad.mit.edu	37	20	62305089	62305089	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTEL1	51750	broad.mit.edu	37	20	62312042	62312042	+	Silent	SNP	C	T	T	rs141241780		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTN2	6253	broad.mit.edu	37	19	46000123	46000123	+	5'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67718658	67718658	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RTTN	25914	broad.mit.edu	37	18	67795689	67795689	+	Silent	SNP	C	A	A	rs149233888	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUVBL1	8607	broad.mit.edu	37	3	127842427	127842427	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUVBL1	8607	broad.mit.edu	37	3	127842427	127842427	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RUVBL1	8607	broad.mit.edu	37	3	127842427	127842427	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP1	59350	broad.mit.edu	37	4	159494026	159494026	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP1	59350	broad.mit.edu	37	4	159494026	159494026	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP1	59350	broad.mit.edu	37	4	159494026	159494026	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXRG	6258	broad.mit.edu	37	1	165389057	165389057	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXRG	6258	broad.mit.edu	37	1	165389057	165389057	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXRG	6258	broad.mit.edu	37	1	165389057	165389057	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237604835	237604835	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237729943	237729943	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237893718	237893718	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237955446	237955446	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237604835	237604835	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237729943	237729943	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237955446	237955446	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237604835	237604835	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237729943	237729943	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237798280	237798280	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237893718	237893718	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237955446	237955446	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33765778	33765778	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33765778	33765778	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR3	6263	broad.mit.edu	37	15	33765778	33765778	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134992775	134992775	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134992775	134992775	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAGE1	55511	broad.mit.edu	37	X	134992775	134992775	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL2	6297	broad.mit.edu	37	14	21992275	21992276	+	Frame_Shift_Ins	INS	-	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD12	401474	broad.mit.edu	37	8	119505959	119505959	+	Intron	SNP	C	T	T	rs146506326	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD4A	23034	broad.mit.edu	37	14	55236950	55236950	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD4A	23034	broad.mit.edu	37	14	55236950	55236950	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD4A	23034	broad.mit.edu	37	14	55236950	55236950	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92764820	92764820	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92764820	92764820	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9L	219285	broad.mit.edu	37	7	92764820	92764820	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMHD1	25939	broad.mit.edu	37	20	35540928	35540928	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMHD1	25939	broad.mit.edu	37	20	35540928	35540928	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMHD1	25939	broad.mit.edu	37	20	35540928	35540928	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP130	79595	broad.mit.edu	37	2	128757524	128757524	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAP130	79595	broad.mit.edu	37	2	128757524	128757524	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAPS2	9701	broad.mit.edu	37	22	50861866	50861867	+	Intron	INS	-	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAPS2	9701	broad.mit.edu	37	22	50861866	50861867	+	Intron	INS	-	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAPS2	9701	broad.mit.edu	37	22	50861866	50861867	+	Intron	INS	-	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATL1	340562	broad.mit.edu	37	X	84349256	84349256	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATL1	340562	broad.mit.edu	37	X	84349256	84349256	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SATL1	340562	broad.mit.edu	37	X	84349256	84349256	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBF2	81846	broad.mit.edu	37	11	9985307	9985307	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SBF2	81846	broad.mit.edu	37	11	9985307	9985307	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG2	7857	broad.mit.edu	37	2	224463262	224463262	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG2	7857	broad.mit.edu	37	2	224463262	224463262	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCG2	7857	broad.mit.edu	37	2	224463262	224463262	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN11A	11280	broad.mit.edu	37	3	38936055	38936055	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166896013	166896013	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166896013	166896013	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166896013	166896013	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	166025352	166025352	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	166025352	166025352	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	166025352	166025352	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3B	55800	broad.mit.edu	37	11	123524584	123524584	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3B	55800	broad.mit.edu	37	11	123524584	123524584	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62018710	62018710	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62018710	62018710	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN4A	6329	broad.mit.edu	37	17	62018710	62018710	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167133545	167133545	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167133545	167133545	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN9A	6335	broad.mit.edu	37	2	167133545	167133545	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29966088	29966088	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29980415	29980415	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29966088	29966088	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29980415	29980415	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCRN1	9805	broad.mit.edu	37	7	29980415	29980415	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG3	10807	broad.mit.edu	37	9	139301896	139301896	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG3	10807	broad.mit.edu	37	9	139301896	139301896	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDCCAG3	10807	broad.mit.edu	37	9	139301896	139301896	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4153708	4153708	+	Missense_Mutation	SNP	G	T	T	rs142268038		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4153708	4153708	+	Missense_Mutation	SNP	G	T	T	rs142268038		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK1	221935	broad.mit.edu	37	7	4153708	4153708	+	Missense_Mutation	SNP	G	T	T	rs142268038		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDS	10993	broad.mit.edu	37	12	113836439	113836439	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDS	10993	broad.mit.edu	37	12	113836439	113836439	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDS	10993	broad.mit.edu	37	12	113836439	113836439	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC13	6396	broad.mit.edu	37	3	10354321	10354321	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC13	6396	broad.mit.edu	37	3	10354321	10354321	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC13	6396	broad.mit.edu	37	3	10354321	10354321	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L3	266629	broad.mit.edu	37	22	30865963	30865963	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L3	266629	broad.mit.edu	37	22	30865963	30865963	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L3	266629	broad.mit.edu	37	22	30865963	30865963	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L5	9717	broad.mit.edu	37	16	5053369	5053369	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC14L5	9717	broad.mit.edu	37	16	5053369	5053369	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24D	9871	broad.mit.edu	37	4	119745614	119745614	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC24D	9871	broad.mit.edu	37	4	119745614	119745614	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31A	22872	broad.mit.edu	37	4	83740390	83740390	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31A	22872	broad.mit.edu	37	4	83740390	83740390	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC31A	22872	broad.mit.edu	37	4	83740390	83740390	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC63	11231	broad.mit.edu	37	6	108214765	108214765	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELENBP1	8991	broad.mit.edu	37	1	151340636	151340636	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELE	6401	broad.mit.edu	37	1	169698625	169698625	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELE	6401	broad.mit.edu	37	1	169698625	169698625	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELE	6401	broad.mit.edu	37	1	169698625	169698625	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83640407	83640407	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83640407	83640407	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83640407	83640407	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3F	6405	broad.mit.edu	37	3	50220473	50220473	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3F	6405	broad.mit.edu	37	3	50220473	50220473	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9108441	9108441	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9108441	9108441	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5A	9037	broad.mit.edu	37	5	9108441	9108441	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5B	54437	broad.mit.edu	37	3	122642418	122642418	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5B	54437	broad.mit.edu	37	3	122629255	122629255	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5B	54437	broad.mit.edu	37	3	122642418	122642418	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA5B	54437	broad.mit.edu	37	3	122642418	122642418	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEPT14	346288	broad.mit.edu	37	7	55929665	55929665	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA10	51156	broad.mit.edu	37	14	94750231	94750231	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA10	51156	broad.mit.edu	37	14	94750231	94750231	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA10	51156	broad.mit.edu	37	14	94750231	94750231	+	3'UTR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA11	256394	broad.mit.edu	37	14	94914953	94914953	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA11	256394	broad.mit.edu	37	14	94914953	94914953	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA11	256394	broad.mit.edu	37	14	94914953	94914953	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA1	5265	broad.mit.edu	37	14	94845955	94845955	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA1	5265	broad.mit.edu	37	14	94845955	94845955	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA1	5265	broad.mit.edu	37	14	94845955	94845955	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA9	327657	broad.mit.edu	37	14	94936027	94936027	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA9	327657	broad.mit.edu	37	14	94936140	94936140	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA9	327657	broad.mit.edu	37	14	94936027	94936027	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA9	327657	broad.mit.edu	37	14	94936140	94936140	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA9	327657	broad.mit.edu	37	14	94936027	94936027	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA9	327657	broad.mit.edu	37	14	94936140	94936140	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB12	89777	broad.mit.edu	37	18	61231212	61231212	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB3	6317	broad.mit.edu	37	18	61328498	61328498	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB3	6317	broad.mit.edu	37	18	61328498	61328498	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINB3	6317	broad.mit.edu	37	18	61328498	61328498	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERTAD2	9792	broad.mit.edu	37	2	64863699	64863699	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERTAD2	9792	broad.mit.edu	37	2	64863699	64863699	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SESTD1	91404	broad.mit.edu	37	2	179981607	179981607	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42533120	42533120	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42533120	42533120	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42533086	42533086	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42533120	42533120	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L2	26470	broad.mit.edu	37	16	29897071	29897071	+	Splice_Site	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L2	26470	broad.mit.edu	37	16	29897071	29897071	+	Splice_Site	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L2	26470	broad.mit.edu	37	16	29897071	29897071	+	Splice_Site	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26761403	26761403	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26761403	26761403	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L	23544	broad.mit.edu	37	22	26761403	26761403	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7214428	7214428	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7214428	7214428	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFMBT2	57713	broad.mit.edu	37	10	7214428	7214428	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46320773	46320773	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46320773	46320773	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFRS2IP	9169	broad.mit.edu	37	12	46320773	46320773	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67154724	67154724	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67154724	67154724	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGIP1	84251	broad.mit.edu	37	1	67154724	67154724	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK2	10110	broad.mit.edu	37	20	42213457	42213457	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK2	10110	broad.mit.edu	37	20	42213457	42213457	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK2	10110	broad.mit.edu	37	20	42213457	42213457	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK3	23678	broad.mit.edu	37	8	67679620	67679620	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK3	23678	broad.mit.edu	37	8	67679620	67679620	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SGK3	23678	broad.mit.edu	37	8	67679620	67679620	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2B1	25970	broad.mit.edu	37	16	28878264	28878264	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2B1	25970	broad.mit.edu	37	16	28878264	28878264	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL3	6457	broad.mit.edu	37	15	84237394	84237394	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL3	6457	broad.mit.edu	37	15	84237394	84237394	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL3	6457	broad.mit.edu	37	15	84237364	84237364	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH3GL3	6457	broad.mit.edu	37	15	84237394	84237394	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK3	85358	broad.mit.edu	37	22	51143400	51143400	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK3	85358	broad.mit.edu	37	22	51143400	51143400	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHANK3	85358	broad.mit.edu	37	22	51143400	51143400	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPRH	257218	broad.mit.edu	37	6	146262871	146262871	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPRH	257218	broad.mit.edu	37	6	146262871	146262871	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHPRH	257218	broad.mit.edu	37	6	146262871	146262871	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHQ1	55164	broad.mit.edu	37	3	72873746	72873746	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHQ1	55164	broad.mit.edu	37	3	72873746	72873746	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SHQ1	55164	broad.mit.edu	37	3	72873746	72873746	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC10	89790	broad.mit.edu	37	19	51914385	51914385	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC10	89790	broad.mit.edu	37	19	51914385	51914385	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC10	89790	broad.mit.edu	37	19	51914385	51914385	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC6	946	broad.mit.edu	37	19	52031218	52031218	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC6	946	broad.mit.edu	37	19	52031218	52031218	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51957682	51957682	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51961521	51961521	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51957682	51957682	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51961521	51961521	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51961521	51961521	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC9	27180	broad.mit.edu	37	19	51630332	51630332	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC9	27180	broad.mit.edu	37	19	51630332	51630332	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC9	27180	broad.mit.edu	37	19	51630332	51630332	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164737625	164737625	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164737625	164737625	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKA2	348235	broad.mit.edu	37	17	57232319	57232319	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKAP2	8935	broad.mit.edu	37	7	26779578	26779578	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKAP2	8935	broad.mit.edu	37	7	26779701	26779701	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKAP2	8935	broad.mit.edu	37	7	26779578	26779578	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKAP2	8935	broad.mit.edu	37	7	26779578	26779578	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKP2	6502	broad.mit.edu	37	5	36163895	36163895	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKP2	6502	broad.mit.edu	37	5	36163895	36163895	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SKP2	6502	broad.mit.edu	37	5	36163895	36163895	+	Intron	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF1	6504	broad.mit.edu	37	1	160589779	160589779	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF1	6504	broad.mit.edu	37	1	160589779	160589779	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF1	6504	broad.mit.edu	37	1	160589779	160589779	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF7	57823	broad.mit.edu	37	1	160708987	160708987	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF7	57823	broad.mit.edu	37	1	160708987	160708987	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF7	57823	broad.mit.edu	37	1	160708987	160708987	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A1	6554	broad.mit.edu	37	14	70263456	70263456	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A1	6554	broad.mit.edu	37	14	70263456	70263456	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A1	6554	broad.mit.edu	37	14	70263456	70263456	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103701510	103701510	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103718254	103718254	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103701510	103701510	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103718254	103718254	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A2	6555	broad.mit.edu	37	13	103718254	103718254	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A7	84068	broad.mit.edu	37	4	147425062	147425062	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A7	84068	broad.mit.edu	37	4	147425062	147425062	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC10A7	84068	broad.mit.edu	37	4	147425062	147425062	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48500307	48500307	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48500307	48500307	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48500307	48500307	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A5	284111	broad.mit.edu	37	17	6597649	6597649	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A2	6565	broad.mit.edu	37	3	121634399	121634399	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A2	6565	broad.mit.edu	37	3	121634399	121634399	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC15A2	6565	broad.mit.edu	37	3	121634399	121634399	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A3	10786	broad.mit.edu	37	6	25849499	25849499	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A4	10050	broad.mit.edu	37	6	25769244	25769244	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A4	10050	broad.mit.edu	37	6	25769244	25769244	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A4	10050	broad.mit.edu	37	6	25769244	25769244	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A9	63910	broad.mit.edu	37	20	61588903	61588903	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A9	63910	broad.mit.edu	37	20	61588903	61588903	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC17A9	63910	broad.mit.edu	37	20	61588903	61588903	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36686206	36686206	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36686206	36686206	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC1A3	6507	broad.mit.edu	37	5	36686206	36686206	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A13	9390	broad.mit.edu	37	3	38316550	38316550	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A13	9390	broad.mit.edu	37	3	38316550	38316550	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A13	9390	broad.mit.edu	37	3	38316550	38316550	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A14	9389	broad.mit.edu	37	3	38350687	38350687	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A14	9389	broad.mit.edu	37	3	38350687	38350687	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A14	9389	broad.mit.edu	37	3	38350687	38350687	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A23	63027	broad.mit.edu	37	6	3324006	3324006	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A23	63027	broad.mit.edu	37	6	3324006	3324006	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A4	6583	broad.mit.edu	37	5	131671762	131671762	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A4	6583	broad.mit.edu	37	5	131671762	131671762	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A4	6583	broad.mit.edu	37	5	131671762	131671762	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A5	6584	broad.mit.edu	37	5	131705591	131705591	+	5'UTR	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A6	9356	broad.mit.edu	37	11	62749428	62749428	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A6	9356	broad.mit.edu	37	11	62749428	62749428	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A6	9356	broad.mit.edu	37	11	62749428	62749428	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A8	9376	broad.mit.edu	37	11	62767041	62767042	+	Intron	DNP	GG	CT	CT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A8	9376	broad.mit.edu	37	11	62767041	62767042	+	Intron	DNP	GG	CT	CT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A8	9376	broad.mit.edu	37	11	62767041	62767042	+	Intron	DNP	GG	CT	CT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A13	10165	broad.mit.edu	37	7	95750587	95750587	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A27	9481	broad.mit.edu	37	6	46638783	46638783	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A27	9481	broad.mit.edu	37	6	46638783	46638783	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A32	81034	broad.mit.edu	37	8	104426906	104426907	+	Intron	DEL	AC	-	-	rs59125759		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107417228	107417229	+	Intron	INS	-	TTTGGTTAGT	TTTGGTTAGT	rs58589956		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107432382	107432382	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92355525	92355525	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92407148	92407148	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92407148	92407148	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A7	115111	broad.mit.edu	37	8	92407148	92407148	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC27A2	11001	broad.mit.edu	37	15	50494839	50494839	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A3	7781	broad.mit.edu	37	2	27481082	27481082	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A3	7781	broad.mit.edu	37	2	27481082	27481082	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A3	7781	broad.mit.edu	37	2	27481082	27481082	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35B2	347734	broad.mit.edu	37	6	44223448	44223448	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35B2	347734	broad.mit.edu	37	6	44223448	44223448	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35B2	347734	broad.mit.edu	37	6	44223448	44223448	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F1	222553	broad.mit.edu	37	6	118598724	118598724	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F1	222553	broad.mit.edu	37	6	118598724	118598724	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F1	222553	broad.mit.edu	37	6	118598724	118598724	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F4	341880	broad.mit.edu	37	14	58036699	58036699	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F4	341880	broad.mit.edu	37	14	58036699	58036699	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC35F4	341880	broad.mit.edu	37	14	58036699	58036699	+	Splice_Site	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A10	124565	broad.mit.edu	37	17	79250740	79250740	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC38A10	124565	broad.mit.edu	37	17	79250740	79250740	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108136969	108136969	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108136969	108136969	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A1	23446	broad.mit.edu	37	9	108136969	108136969	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75708484	75708484	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75708484	75708484	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75708484	75708484	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A1	50651	broad.mit.edu	37	1	8385341	8385341	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A1	50651	broad.mit.edu	37	1	8385341	8385341	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A1	50651	broad.mit.edu	37	1	8385341	8385341	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC45A2	51151	broad.mit.edu	37	5	33954456	33954456	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A3	6508	broad.mit.edu	37	2	220496825	220496825	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A3	6508	broad.mit.edu	37	2	220496825	220496825	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A3	6508	broad.mit.edu	37	2	220496825	220496825	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72166739	72166739	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A4	8671	broad.mit.edu	37	4	72300257	72300257	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A11	115584	broad.mit.edu	37	16	24895432	24895432	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A11	115584	broad.mit.edu	37	16	24895432	24895432	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A11	115584	broad.mit.edu	37	16	24895432	24895432	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A12	159963	broad.mit.edu	37	11	26714269	26714269	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A4	6527	broad.mit.edu	37	22	32647634	32647634	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A4	6527	broad.mit.edu	37	22	32647634	32647634	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108604640	108604640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108604640	108604640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108604640	108604640	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A8	160728	broad.mit.edu	37	12	101576500	101576500	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A8	160728	broad.mit.edu	37	12	101576500	101576500	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10967663	10967663	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10967663	10967663	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10967663	10967663	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A13	6540	broad.mit.edu	37	12	330508	330508	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85266251	85266251	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A15	55117	broad.mit.edu	37	12	85266251	85266251	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1212589	1212589	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1213592	1213592	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1213974	1213974	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1212589	1212589	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1213592	1213592	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1213974	1213974	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1212589	1212589	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A19	340024	broad.mit.edu	37	5	1213592	1213592	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20628585	20628585	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20639587	20639587	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20628585	20628585	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20639587	20639587	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20628585	20628585	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A9	6536	broad.mit.edu	37	1	44489925	44489926	+	Translation_Start_Site	INS	-	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A9	6536	broad.mit.edu	37	1	44489925	44489926	+	Translation_Start_Site	INS	-	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A13	157724	broad.mit.edu	37	8	87235403	87235403	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A13	157724	broad.mit.edu	37	8	87235403	87235403	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A2	6542	broad.mit.edu	37	8	17396448	17396448	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A2	6542	broad.mit.edu	37	8	17396448	17396448	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC7A2	6542	broad.mit.edu	37	8	17396448	17396448	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A3	6547	broad.mit.edu	37	14	70513150	70513150	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC8A3	6547	broad.mit.edu	37	14	70513150	70513150	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A11	284525	broad.mit.edu	37	1	173502736	173502736	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A11	284525	broad.mit.edu	37	1	173502736	173502736	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A11	284525	broad.mit.edu	37	1	173502736	173502736	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A4	389015	broad.mit.edu	37	2	103090058	103090058	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A4	389015	broad.mit.edu	37	2	103090058	103090058	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A8	23315	broad.mit.edu	37	20	48431738	48431738	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1A2	6579	broad.mit.edu	37	12	21450292	21450292	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1A2	6579	broad.mit.edu	37	12	21450292	21450292	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1C1	53919	broad.mit.edu	37	12	20886042	20886042	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1C1	53919	broad.mit.edu	37	12	20886042	20886042	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO1C1	53919	broad.mit.edu	37	12	20886042	20886042	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2B1	11309	broad.mit.edu	37	11	74899193	74899193	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2B1	11309	broad.mit.edu	37	11	74899193	74899193	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2B1	11309	broad.mit.edu	37	11	74899193	74899193	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO5A1	81796	broad.mit.edu	37	8	70667570	70667570	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO5A1	81796	broad.mit.edu	37	8	70706595	70706595	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO5A1	81796	broad.mit.edu	37	8	70667570	70667570	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO5A1	81796	broad.mit.edu	37	8	70706595	70706595	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO5A1	81796	broad.mit.edu	37	8	70667570	70667570	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO5A1	81796	broad.mit.edu	37	8	70706595	70706595	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98802742	98802742	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98802742	98802742	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98802742	98802742	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98824674	98824674	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168151504	168151504	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168271528	168271529	+	Intron	DEL	AC	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168151504	168151504	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT3	6586	broad.mit.edu	37	5	168271528	168271529	+	Intron	DEL	AC	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK6	84189	broad.mit.edu	37	13	86369289	86369289	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK6	84189	broad.mit.edu	37	13	86369289	86369289	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK6	84189	broad.mit.edu	37	13	86369289	86369289	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA2	6595	broad.mit.edu	37	9	2191192	2191192	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA2	6595	broad.mit.edu	37	9	2191192	2191192	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA2	6595	broad.mit.edu	37	9	2191192	2191192	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11145653	11145653	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCA4	6597	broad.mit.edu	37	19	11145653	11145653	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAD1	56916	broad.mit.edu	37	4	95210624	95210624	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAD1	56916	broad.mit.edu	37	4	95210624	95210624	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCAD1	56916	broad.mit.edu	37	4	95210624	95210624	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCD3	6604	broad.mit.edu	37	7	150939644	150939644	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMARCD3	6604	broad.mit.edu	37	7	150939644	150939644	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC1B	27127	broad.mit.edu	37	22	45802673	45802673	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC1B	27127	broad.mit.edu	37	22	45802673	45802673	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC1B	27127	broad.mit.edu	37	22	45802673	45802673	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC4	10051	broad.mit.edu	37	3	160120494	160120494	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC4	10051	broad.mit.edu	37	3	160120494	160120494	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMC4	10051	broad.mit.edu	37	3	160120494	160120494	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMEK1	55671	broad.mit.edu	37	14	91927780	91927780	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMEK1	55671	broad.mit.edu	37	14	91927780	91927780	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMEK1	55671	broad.mit.edu	37	14	91927780	91927780	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC1	64093	broad.mit.edu	37	14	70490078	70490078	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC1	64093	broad.mit.edu	37	14	70490078	70490078	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMOC1	64093	broad.mit.edu	37	14	70490078	70490078	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMU1	55234	broad.mit.edu	37	9	33052933	33052933	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMU1	55234	broad.mit.edu	37	9	33052933	33052933	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMURF1	57154	broad.mit.edu	37	7	98633309	98633309	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMURF1	57154	broad.mit.edu	37	7	98633309	98633309	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMURF1	57154	broad.mit.edu	37	7	98633309	98633309	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD2	56950	broad.mit.edu	37	1	214504121	214504121	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD2	56950	broad.mit.edu	37	1	214504121	214504121	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD2	56950	broad.mit.edu	37	1	214504121	214504121	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMYD3	64754	broad.mit.edu	37	1	246673571	246673571	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNAP25	6616	broad.mit.edu	37	20	10273752	10273752	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SND1	27044	broad.mit.edu	37	7	127339010	127339010	+	Intron	SNP	A	T	T	rs147567302	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SND1	27044	broad.mit.edu	37	7	127339010	127339010	+	Intron	SNP	A	T	T	rs147567302	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNIP1	79753	broad.mit.edu	37	1	38005774	38005774	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNIP1	79753	broad.mit.edu	37	1	38005774	38005774	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNIP1	79753	broad.mit.edu	37	1	38005774	38005774	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-30	767611	broad.mit.edu	37	14	101456576	101456577	+	5'Flank	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-30	767611	broad.mit.edu	37	14	101456576	101456577	+	5'Flank	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-30	767611	broad.mit.edu	37	14	101456576	101456577	+	5'Flank	DNP	GG	TT	TT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-17	100033455	broad.mit.edu	37	15	25448271	25448271	+	5'Flank	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-17	100033455	broad.mit.edu	37	15	25448271	25448271	+	5'Flank	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-17	100033455	broad.mit.edu	37	15	25448271	25448271	+	5'Flank	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25468349	25468349	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25468349	25468349	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-20	100033460	broad.mit.edu	37	15	25468349	25468349	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96970436	96970436	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96970436	96970436	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96970436	96970436	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX11	29916	broad.mit.edu	37	17	46190772	46190772	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX11	29916	broad.mit.edu	37	17	46190772	46190772	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX11	29916	broad.mit.edu	37	17	46190772	46190772	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX27	81609	broad.mit.edu	37	1	151633127	151633128	+	Intron	INS	-	CA	CA	rs150621864	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOAT2	8435	broad.mit.edu	37	12	53515143	53515143	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106802840	106802840	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106802840	106802840	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106802840	106802840	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX14	8403	broad.mit.edu	37	3	137483858	137483858	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX14	8403	broad.mit.edu	37	3	137483858	137483858	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX14	8403	broad.mit.edu	37	3	137483858	137483858	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	23999036	23999036	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	23999036	23999036	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX5	6660	broad.mit.edu	37	12	23999036	23999036	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX7	83595	broad.mit.edu	37	8	10690446	10690446	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX7	83595	broad.mit.edu	37	8	10690446	10690446	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX7	83595	broad.mit.edu	37	8	10690446	10690446	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231162202	231162202	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231162202	231162202	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SP140	11262	broad.mit.edu	37	2	231162202	231162202	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG11B	10407	broad.mit.edu	37	8	7308475	7308475	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118693337	118693337	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG17	200162	broad.mit.edu	37	1	118693337	118693337	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXC	64663	broad.mit.edu	37	X	140336459	140336459	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXC	64663	broad.mit.edu	37	X	140336459	140336459	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPANXC	64663	broad.mit.edu	37	X	140336459	140336459	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA13	221178	broad.mit.edu	37	13	24697588	24697588	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA13	221178	broad.mit.edu	37	13	24697588	24697588	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA13	221178	broad.mit.edu	37	13	24697588	24697588	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE3	441272	broad.mit.edu	37	7	99913517	99913517	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE3	441272	broad.mit.edu	37	7	99913517	99913517	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE3	441272	broad.mit.edu	37	7	99913517	99913517	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE7P	441251	broad.mit.edu	37	7	72340936	72340936	+	5'Flank	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35691149	35691149	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35793323	35793323	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35691149	35691149	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35793323	35793323	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35691149	35691149	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35779450	35779450	+	Splice_Site	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35793323	35793323	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220353298	220353298	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220353298	220353298	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEG	10290	broad.mit.edu	37	2	220353298	220353298	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPIRE2	84501	broad.mit.edu	37	16	89934657	89934657	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPN	6693	broad.mit.edu	37	16	29675148	29675148	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPN	6693	broad.mit.edu	37	16	29675148	29675148	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPN	6693	broad.mit.edu	37	16	29675148	29675148	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK1	6695	broad.mit.edu	37	5	136476389	136476389	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPOCK1	6695	broad.mit.edu	37	5	136476389	136476389	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPON1	10418	broad.mit.edu	37	11	14276276	14276277	+	Splice_Site	DEL	GT	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR1B	6699	broad.mit.edu	37	1	153005016	153005016	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR1B	6699	broad.mit.edu	37	1	153005016	153005016	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR1B	6699	broad.mit.edu	37	1	153005016	153005016	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR2E	6704	broad.mit.edu	37	1	153066043	153066043	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55655751	55655751	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55655751	55655751	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRYD5	84767	broad.mit.edu	37	11	55655751	55655751	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158589184	158589184	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158612858	158612858	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158637964	158637964	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158589184	158589184	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158612858	158612858	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158637964	158637964	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158589184	158589184	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158612858	158612858	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158637964	158637964	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54893182	54893182	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54893182	54893182	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN1	6711	broad.mit.edu	37	2	54893182	54893182	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN2	6712	broad.mit.edu	37	11	66478225	66478225	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN2	6712	broad.mit.edu	37	11	66478225	66478225	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTY2D1	144108	broad.mit.edu	37	11	18636375	18636376	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTY2D1	144108	broad.mit.edu	37	11	18636375	18636376	+	Frame_Shift_Ins	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQSTM1	8878	broad.mit.edu	37	5	179250885	179250885	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQSTM1	8878	broad.mit.edu	37	5	179250885	179250885	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRA1	10011	broad.mit.edu	37	5	139931628	139931629	+	In_Frame_Ins	INS	-	GTC	GTC	rs148588257	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRBD1	55133	broad.mit.edu	37	2	45826566	45826566	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP1	57522	broad.mit.edu	37	12	64480811	64480811	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP1	57522	broad.mit.edu	37	12	64480811	64480811	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP1	57522	broad.mit.edu	37	12	64480811	64480811	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP2	23380	broad.mit.edu	37	1	206611329	206611329	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP2	23380	broad.mit.edu	37	1	206634713	206634713	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP2	23380	broad.mit.edu	37	1	206611329	206611329	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP2	23380	broad.mit.edu	37	1	206634713	206634713	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP2	23380	broad.mit.edu	37	1	206611329	206611329	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRGAP2	23380	broad.mit.edu	37	1	206634713	206634713	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSFA2	6744	broad.mit.edu	37	2	182784139	182784139	+	Missense_Mutation	SNP	G	T	T	rs150716378	byFrequency;by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149499116	149499117	+	Intron	DEL	AT	-	-	rs61047652		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSPO	23145	broad.mit.edu	37	7	149476708	149476708	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130059932	130059932	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130060321	130060321	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130059932	130059932	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130060321	130060321	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST14	6768	broad.mit.edu	37	11	130059932	130059932	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53045888	53045888	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53045888	53045888	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53045888	53045888	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST18	9705	broad.mit.edu	37	8	53124599	53124599	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA3	51046	broad.mit.edu	37	18	55021552	55021552	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA3	51046	broad.mit.edu	37	18	55021552	55021552	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104126791	104126792	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB2	55576	broad.mit.edu	37	12	104126791	104126792	+	Frame_Shift_Ins	INS	-	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123156495	123156495	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123156495	123156495	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAG2	10735	broad.mit.edu	37	X	123156495	123156495	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP1	26228	broad.mit.edu	37	4	68436840	68436840	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP1	26228	broad.mit.edu	37	4	68436840	68436840	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAP1	26228	broad.mit.edu	37	4	68436840	68436840	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33703975	33703975	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33704350	33704350	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33703975	33703975	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33704350	33704350	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33703975	33703975	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD13	90627	broad.mit.edu	37	13	33704350	33704350	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD3	10948	broad.mit.edu	37	17	37814806	37814806	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD3	10948	broad.mit.edu	37	17	37814806	37814806	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD3	10948	broad.mit.edu	37	17	37814806	37814806	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD7	56910	broad.mit.edu	37	2	96858109	96858109	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD7	56910	broad.mit.edu	37	2	96858109	96858109	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STARD7	56910	broad.mit.edu	37	2	96858109	96858109	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	192011545	192011545	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	192011545	192011545	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT4	6775	broad.mit.edu	37	2	192011545	192011545	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STEAP4	79689	broad.mit.edu	37	7	87913403	87913403	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STEAP4	79689	broad.mit.edu	37	7	87913403	87913403	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STEAP4	79689	broad.mit.edu	37	7	87913403	87913403	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIM1	6786	broad.mit.edu	37	11	4104157	4104157	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIM1	6786	broad.mit.edu	37	11	4104157	4104157	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIM1	6786	broad.mit.edu	37	11	4104157	4104157	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23826529	23826529	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23826529	23826529	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK31	56164	broad.mit.edu	37	7	23826529	23826529	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32C	282974	broad.mit.edu	37	10	134040418	134040418	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32C	282974	broad.mit.edu	37	10	134040418	134040418	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK32C	282974	broad.mit.edu	37	10	134040418	134040418	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRADA	92335	broad.mit.edu	37	17	61790733	61790733	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRADA	92335	broad.mit.edu	37	17	61790733	61790733	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STRADA	92335	broad.mit.edu	37	17	61790733	61790733	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX18	53407	broad.mit.edu	37	4	4422554	4422554	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX18	53407	broad.mit.edu	37	4	4422554	4422554	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STX18	53407	broad.mit.edu	37	4	4422554	4422554	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP1	6812	broad.mit.edu	37	9	130420719	130420719	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP1	6812	broad.mit.edu	37	9	130420719	130420719	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP1	6812	broad.mit.edu	37	9	130420719	130420719	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP4	252983	broad.mit.edu	37	17	53068212	53068212	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STXBP5L	9515	broad.mit.edu	37	3	121076186	121076186	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT2A1	6822	broad.mit.edu	37	19	48377943	48377943	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT2A1	6822	broad.mit.edu	37	19	48377943	48377943	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SULT2A1	6822	broad.mit.edu	37	19	48377943	48377943	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149877220	149877220	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SV2A	9900	broad.mit.edu	37	1	149877220	149877220	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYCP2L	221711	broad.mit.edu	37	6	10930655	10930655	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYMPK	8189	broad.mit.edu	37	19	46347198	46347198	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYMPK	8189	broad.mit.edu	37	19	46347198	46347198	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152763330	152763330	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152763330	152763330	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152763330	152763330	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64678611	64678611	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64678611	64678611	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE2	23224	broad.mit.edu	37	14	64678611	64678611	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2	171024	broad.mit.edu	37	4	119948371	119948371	+	Missense_Mutation	SNP	C	T	T	rs35676119		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2	171024	broad.mit.edu	37	4	119951975	119951975	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2	171024	broad.mit.edu	37	4	119948371	119948371	+	Missense_Mutation	SNP	C	T	T	rs35676119		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2	171024	broad.mit.edu	37	4	119951975	119951975	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2	171024	broad.mit.edu	37	4	119948371	119948371	+	Missense_Mutation	SNP	C	T	T	rs35676119		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNPO2	171024	broad.mit.edu	37	4	119951975	119951975	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT13	57586	broad.mit.edu	37	11	45277523	45277523	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT13	57586	broad.mit.edu	37	11	45277523	45277523	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT5	6861	broad.mit.edu	37	19	55685664	55685664	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT6	148281	broad.mit.edu	37	1	114640465	114640465	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT6	148281	broad.mit.edu	37	1	114640465	114640465	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT6	148281	broad.mit.edu	37	1	114640465	114640465	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT9	143425	broad.mit.edu	37	11	7324198	7324198	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85459316	85459316	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85459316	85459316	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYTL2	54843	broad.mit.edu	37	11	85459316	85459316	+	Silent	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32633786	32633787	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32633786	32633787	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAF1L	138474	broad.mit.edu	37	9	32633786	32633787	+	Missense_Mutation	DNP	CC	AA	AA			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAL1	6886	broad.mit.edu	37	1	47685902	47685902	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAL1	6886	broad.mit.edu	37	1	47685902	47685902	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARSL2	123283	broad.mit.edu	37	15	102197168	102197168	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARSL2	123283	broad.mit.edu	37	15	102197168	102197168	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TARSL2	123283	broad.mit.edu	37	15	102197168	102197168	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R1	80835	broad.mit.edu	37	1	6639557	6639557	+	Nonsense_Mutation	SNP	C	A	A	rs145637880	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R1	80835	broad.mit.edu	37	1	6639557	6639557	+	Nonsense_Mutation	SNP	C	A	A	rs145637880	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS1R1	80835	broad.mit.edu	37	1	6639557	6639557	+	Nonsense_Mutation	SNP	C	A	A	rs145637880	byFrequency	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R46	259292	broad.mit.edu	37	12	11214101	11214101	+	Missense_Mutation	SNP	C	T	T	rs147671448	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3C	414060	broad.mit.edu	37	17	34641437	34641437	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3C	414060	broad.mit.edu	37	17	34641437	34641437	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3C	414060	broad.mit.edu	37	17	34641437	34641437	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60351342	60351342	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60351342	60351342	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60348261	60348261	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D3P2	440452	broad.mit.edu	37	17	60351342	60351342	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D4	9882	broad.mit.edu	37	13	75901815	75901815	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D4	9882	broad.mit.edu	37	13	75901815	75901815	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D4	9882	broad.mit.edu	37	13	75901815	75901815	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85446332	85446332	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85446332	85446332	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX18	9096	broad.mit.edu	37	6	85446332	85446332	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX19	9095	broad.mit.edu	37	1	168208127	168208127	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX22	50945	broad.mit.edu	37	X	79277847	79277847	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX22	50945	broad.mit.edu	37	X	79277847	79277847	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX22	50945	broad.mit.edu	37	X	79277847	79277847	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX3	6926	broad.mit.edu	37	12	115114148	115114148	+	Missense_Mutation	SNP	C	A	A	rs140580685	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX3	6926	broad.mit.edu	37	12	115114148	115114148	+	Missense_Mutation	SNP	C	A	A	rs140580685	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX3	6926	broad.mit.edu	37	12	115114148	115114148	+	Missense_Mutation	SNP	C	A	A	rs140580685	byFrequency	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBX5	6910	broad.mit.edu	37	12	114804114	114804114	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBXA2R	6915	broad.mit.edu	37	19	3600658	3600658	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBXA2R	6915	broad.mit.edu	37	19	3600658	3600658	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA2	6919	broad.mit.edu	37	20	62697832	62697832	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEA2	6919	broad.mit.edu	37	20	62697832	62697832	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEAL6	158931	broad.mit.edu	37	X	101396374	101396374	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEAL6	158931	broad.mit.edu	37	X	101396374	101396374	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEAL6	158931	broad.mit.edu	37	X	101396374	101396374	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	52927071	52927071	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	52927071	52927071	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF7L2	6934	broad.mit.edu	37	10	114918424	114918424	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF7L2	6934	broad.mit.edu	37	10	114918424	114918424	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF7L2	6934	broad.mit.edu	37	10	114918424	114918424	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL1A	8115	broad.mit.edu	37	14	96178149	96178150	+	Intron	DEL	AG	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL6	27004	broad.mit.edu	37	14	96128885	96128885	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL6	27004	broad.mit.edu	37	14	96128885	96128885	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCL6	27004	broad.mit.edu	37	14	96128885	96128885	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTE1	202500	broad.mit.edu	37	6	44255645	44255645	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCTE1	202500	broad.mit.edu	37	6	44255645	44255645	+	5'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD6	221400	broad.mit.edu	37	6	46657599	46657599	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD6	221400	broad.mit.edu	37	6	46657599	46657599	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TDRD6	221400	broad.mit.edu	37	6	46657599	46657599	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECPR1	25851	broad.mit.edu	37	7	97872932	97872932	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECPR1	25851	broad.mit.edu	37	7	97872932	97872932	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20854509	20854509	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEP1	7011	broad.mit.edu	37	14	20854509	20854509	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70446412	70446412	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70450858	70450858	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70446412	70446412	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70450858	70450858	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70446412	70446412	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TET1	80312	broad.mit.edu	37	10	70450858	70450858	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX101	83639	broad.mit.edu	37	19	43921872	43921872	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX101	83639	broad.mit.edu	37	19	43921872	43921872	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13B	56156	broad.mit.edu	37	X	107224574	107224574	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13B	56156	broad.mit.edu	37	X	107225113	107225113	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13B	56156	broad.mit.edu	37	X	107224574	107224574	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13B	56156	broad.mit.edu	37	X	107225113	107225113	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13B	56156	broad.mit.edu	37	X	107224574	107224574	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX13B	56156	broad.mit.edu	37	X	107225113	107225113	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX2	55852	broad.mit.edu	37	17	62272302	62272302	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50791250	50791250	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50791250	50791250	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50791250	50791250	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50697057	50697057	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50697057	50697057	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2D	83741	broad.mit.edu	37	6	50697057	50697057	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFEC	22797	broad.mit.edu	37	7	115580562	115580562	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFEC	22797	broad.mit.edu	37	7	115580562	115580562	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFEC	22797	broad.mit.edu	37	7	115580562	115580562	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFF3	7033	broad.mit.edu	37	21	43733547	43733547	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFF3	7033	broad.mit.edu	37	21	43733547	43733547	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFF3	7033	broad.mit.edu	37	21	43733547	43733547	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFPT	29844	broad.mit.edu	37	19	54618637	54618637	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TF	7018	broad.mit.edu	37	3	133479603	133479603	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR2	7048	broad.mit.edu	37	3	30715822	30715822	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR2	7048	broad.mit.edu	37	3	30715822	30715822	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR2	7048	broad.mit.edu	37	3	30715822	30715822	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92174229	92174229	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92174229	92174229	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBR3	7049	broad.mit.edu	37	1	92174229	92174229	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBRAP1	9392	broad.mit.edu	37	2	105924803	105924803	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBRAP1	9392	broad.mit.edu	37	2	105924803	105924803	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFBRAP1	9392	broad.mit.edu	37	2	105924803	105924803	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44951851	44951851	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44951851	44951851	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44951851	44951851	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM6	343641	broad.mit.edu	37	20	2411694	2411695	+	Intron	DEL	CT	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM7	116179	broad.mit.edu	37	15	43585794	43585794	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM7	116179	broad.mit.edu	37	15	43585794	43585794	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM7	116179	broad.mit.edu	37	15	43585794	43585794	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133923802	133923802	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134125713	134125713	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133923802	133923802	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134125713	134125713	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	133923802	133923802	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TG	7038	broad.mit.edu	37	8	134125713	134125713	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11582602	11582602	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11582602	11582602	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THSD7A	221981	broad.mit.edu	37	7	11582602	11582602	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TH	7054	broad.mit.edu	37	11	2185532	2185532	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TH	7054	broad.mit.edu	37	11	2185532	2185532	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32589756	32589756	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32554698	32554698	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32589756	32589756	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIAM1	7074	broad.mit.edu	37	21	32589756	32589756	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIGD4	201798	broad.mit.edu	37	4	153691700	153691700	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIGD4	201798	broad.mit.edu	37	4	153691700	153691700	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIGD4	201798	broad.mit.edu	37	4	153691700	153691700	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMELESS	8914	broad.mit.edu	37	12	56811918	56811918	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMELESS	8914	broad.mit.edu	37	12	56811918	56811918	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMELESS	8914	broad.mit.edu	37	12	56811918	56811918	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMM17B	10245	broad.mit.edu	37	X	48751400	48751400	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMM17B	10245	broad.mit.edu	37	X	48751400	48751400	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJAP1	93643	broad.mit.edu	37	6	43472822	43472822	+	Silent	SNP	G	A	A	rs151059106	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TJAP1	93643	broad.mit.edu	37	6	43472822	43472822	+	Silent	SNP	G	A	A	rs151059106	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL2	84076	broad.mit.edu	37	4	164393898	164393898	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL2	84076	broad.mit.edu	37	4	164393898	164393898	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TKTL2	84076	broad.mit.edu	37	4	164393898	164393898	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE4	7091	broad.mit.edu	37	9	82322996	82322996	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE4	7091	broad.mit.edu	37	9	82322996	82322996	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE4	7091	broad.mit.edu	37	9	82308673	82308673	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLE4	7091	broad.mit.edu	37	9	82322996	82322996	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166981296	166981296	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166981296	166981296	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL1	7092	broad.mit.edu	37	4	166981296	166981296	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98188503	98188504	+	Frame_Shift_Ins	INS	-	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98188503	98188504	+	Frame_Shift_Ins	INS	-	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLL2	7093	broad.mit.edu	37	10	98188503	98188504	+	Frame_Shift_Ins	INS	-	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC1	117531	broad.mit.edu	37	9	75403108	75403108	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC2	117532	broad.mit.edu	37	20	2605067	2605067	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC2	117532	broad.mit.edu	37	20	2605067	2605067	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC2	117532	broad.mit.edu	37	20	2517340	2517340	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC2	117532	broad.mit.edu	37	20	2605067	2605067	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC5	79838	broad.mit.edu	37	16	19485650	19485650	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC5	79838	broad.mit.edu	37	16	19485650	19485650	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC6	11322	broad.mit.edu	37	17	76113395	76113395	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC6	11322	broad.mit.edu	37	17	76113395	76113395	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMC6	11322	broad.mit.edu	37	17	76113395	76113395	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM108	66000	broad.mit.edu	37	3	133098490	133098490	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM108	66000	broad.mit.edu	37	3	133098490	133098490	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM108	66000	broad.mit.edu	37	3	133098490	133098490	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM110	375346	broad.mit.edu	37	3	52867623	52867623	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM110	375346	broad.mit.edu	37	3	52867623	52867623	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM110	375346	broad.mit.edu	37	3	52867623	52867623	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM150B	284417	broad.mit.edu	37	19	55832365	55832365	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM161A	54929	broad.mit.edu	37	19	19232321	19232321	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM161B	153396	broad.mit.edu	37	5	87494880	87494880	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM161B	153396	broad.mit.edu	37	5	87494880	87494880	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM161B	153396	broad.mit.edu	37	5	87494880	87494880	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM176A	55365	broad.mit.edu	37	7	150500824	150500824	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM176A	55365	broad.mit.edu	37	7	150500824	150500824	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM176A	55365	broad.mit.edu	37	7	150500824	150500824	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM17	200728	broad.mit.edu	37	2	62728639	62728640	+	Intron	INS	-	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM17	200728	broad.mit.edu	37	2	62728639	62728640	+	Intron	INS	-	AA	AA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM195	392636	broad.mit.edu	37	7	15433593	15433593	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM45A	55076	broad.mit.edu	37	3	100275843	100275843	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM45A	55076	broad.mit.edu	37	3	100275843	100275843	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM45A	55076	broad.mit.edu	37	3	100275843	100275843	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63B	55362	broad.mit.edu	37	6	44122031	44122031	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63B	55362	broad.mit.edu	37	6	44122031	44122031	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63B	55362	broad.mit.edu	37	6	44122031	44122031	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63C	57156	broad.mit.edu	37	14	77722812	77722812	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63C	57156	broad.mit.edu	37	14	77722812	77722812	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63C	57156	broad.mit.edu	37	14	77722812	77722812	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133723277	133723277	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133723277	133723277	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM71	137835	broad.mit.edu	37	8	133723277	133723277	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS13	84000	broad.mit.edu	37	11	117800087	117800087	+	5'UTR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS13	84000	broad.mit.edu	37	11	117800087	117800087	+	5'UTR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS13	84000	broad.mit.edu	37	11	117800087	117800087	+	5'UTR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS6	164656	broad.mit.edu	37	22	37499653	37499653	+	5'UTR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS6	164656	broad.mit.edu	37	22	37499653	37499653	+	5'UTR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS6	164656	broad.mit.edu	37	22	37499653	37499653	+	5'UTR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117826978	117826978	+	Nonsense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117826978	117826978	+	Nonsense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNC	3371	broad.mit.edu	37	9	117826978	117826978	+	Nonsense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF8	943	broad.mit.edu	37	1	12157231	12157231	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF8	943	broad.mit.edu	37	1	12157231	12157231	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFRSF8	943	broad.mit.edu	37	1	12157231	12157231	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNFSF13	8741	broad.mit.edu	37	17	7462318	7462318	+	5'UTR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNMD	64102	broad.mit.edu	37	X	99852725	99852725	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNMD	64102	broad.mit.edu	37	X	99852725	99852725	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNMD	64102	broad.mit.edu	37	X	99852725	99852725	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT3	7140	broad.mit.edu	37	11	1947508	1947508	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT3	7140	broad.mit.edu	37	11	1947508	1947508	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175046490	175046490	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175046490	175046490	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNN	63923	broad.mit.edu	37	1	175046490	175046490	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNPO1	3842	broad.mit.edu	37	5	72199499	72199499	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNPO1	3842	broad.mit.edu	37	5	72199499	72199499	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNPO1	3842	broad.mit.edu	37	5	72199499	72199499	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6C	57690	broad.mit.edu	37	17	76047196	76047196	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6C	57690	broad.mit.edu	37	17	76047196	76047196	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNRC6C	57690	broad.mit.edu	37	17	76047196	76047196	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNXB	7148	broad.mit.edu	37	6	32017467	32017467	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM20	9804	broad.mit.edu	37	1	235277265	235277265	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM20	9804	broad.mit.edu	37	1	235277265	235277265	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOMM20	9804	broad.mit.edu	37	1	235277265	235277265	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOPORS	10210	broad.mit.edu	37	9	32544246	32544246	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOPORS	10210	broad.mit.edu	37	9	32544246	32544246	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOPORS	10210	broad.mit.edu	37	9	32544246	32544246	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX4	9878	broad.mit.edu	37	14	21945517	21945517	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOX4	9878	broad.mit.edu	37	14	21945517	21945517	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53BP1	7158	broad.mit.edu	37	15	43720077	43720077	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53BP1	7158	broad.mit.edu	37	15	43720077	43720077	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7579470	7579470	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7579470	7579470	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7579470	7579470	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPH2	121278	broad.mit.edu	37	12	72416181	72416181	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144344384	144344384	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144344384	144344384	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPK1	27010	broad.mit.edu	37	7	144344384	144344384	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1544403	1544403	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1544403	1544403	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPO	7173	broad.mit.edu	37	2	1544403	1544403	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10971752	10971752	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10971752	10971752	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPTE	7179	broad.mit.edu	37	21	10971752	10971752	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF7	84231	broad.mit.edu	37	16	2223445	2223445	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAF7	84231	broad.mit.edu	37	16	2223445	2223445	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1L1	133022	broad.mit.edu	37	4	118006108	118006108	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1L1	133022	broad.mit.edu	37	4	118006108	118006108	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1L1	133022	broad.mit.edu	37	4	118006108	118006108	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1	23471	broad.mit.edu	37	8	71512306	71512306	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1	23471	broad.mit.edu	37	8	71512306	71512306	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1	23471	broad.mit.edu	37	8	71512306	71512306	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRANK1	9881	broad.mit.edu	37	3	36872739	36872739	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRANK1	9881	broad.mit.edu	37	3	36872739	36872739	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRANK1	9881	broad.mit.edu	37	3	36872739	36872739	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC10	7109	broad.mit.edu	37	21	45478948	45478948	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC10	7109	broad.mit.edu	37	21	45478948	45478948	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC10	7109	broad.mit.edu	37	21	45478948	45478948	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAPPC10	7109	broad.mit.edu	37	21	45522609	45522609	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TREM1	54210	broad.mit.edu	37	6	41250108	41250109	+	Intron	INS	-	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIB2	28951	broad.mit.edu	37	2	12880889	12880890	+	Missense_Mutation	DNP	TG	AT	AT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIB2	28951	broad.mit.edu	37	2	12880889	12880890	+	Missense_Mutation	DNP	TG	AT	AT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIB2	28951	broad.mit.edu	37	2	12880889	12880890	+	Missense_Mutation	DNP	TG	AT	AT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM55	84675	broad.mit.edu	37	8	67064862	67064863	+	Splice_Site	DNP	GG	AT	AT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM55	84675	broad.mit.edu	37	8	67064862	67064863	+	Splice_Site	DNP	GG	AT	AT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM55	84675	broad.mit.edu	37	8	67064862	67064863	+	Splice_Site	DNP	GG	AT	AT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189068505	189068505	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189068505	189068505	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIML1	339976	broad.mit.edu	37	4	189068505	189068505	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP13	9319	broad.mit.edu	37	5	908072	908072	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP13	9319	broad.mit.edu	37	5	908072	908072	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP13	9319	broad.mit.edu	37	5	908072	908072	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT2B	79979	broad.mit.edu	37	X	100274269	100274269	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT2B	79979	broad.mit.edu	37	X	100278506	100278506	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT2B	79979	broad.mit.edu	37	X	100274269	100274269	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT2B	79979	broad.mit.edu	37	X	100278506	100278506	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT2B	79979	broad.mit.edu	37	X	100274269	100274269	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRMT2B	79979	broad.mit.edu	37	X	100278506	100278506	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72965976	72965976	+	Intron	SNP	C	A	A	rs117464670	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72965976	72965976	+	Intron	SNP	C	A	A	rs117464670	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPA1	8989	broad.mit.edu	37	8	72965976	72965976	+	Intron	SNP	C	A	A	rs117464670	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101359859	101359859	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101359859	101359859	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC6	7225	broad.mit.edu	37	11	101359859	101359859	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45784220	45784220	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45784220	45784220	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM2	7226	broad.mit.edu	37	21	45784220	45784220	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73531919	73531919	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73478167	73478167	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73531919	73531919	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73531919	73531919	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM4	54795	broad.mit.edu	37	19	49704042	49704042	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM4	54795	broad.mit.edu	37	19	49704042	49704042	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM4	54795	broad.mit.edu	37	19	49704042	49704042	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM5	29850	broad.mit.edu	37	11	2433486	2433486	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM5	29850	broad.mit.edu	37	11	2433486	2433486	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM6	140803	broad.mit.edu	37	9	77363000	77363000	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142625790	142625790	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142625790	142625790	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV5	56302	broad.mit.edu	37	7	142625790	142625790	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRYX3	136541	broad.mit.edu	37	7	141955557	141955557	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRYX3	136541	broad.mit.edu	37	7	141955557	141955557	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81562916	81562916	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81562916	81562916	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSHR	7253	broad.mit.edu	37	14	81562916	81562916	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSIX	9383	broad.mit.edu	37	X	73047408	73047408	+	RNA	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAXIP1	55815	broad.mit.edu	37	16	67859197	67859197	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAXIP1	55815	broad.mit.edu	37	16	67859197	67859197	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSNAXIP1	55815	broad.mit.edu	37	16	67859197	67859197	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN33	340348	broad.mit.edu	37	7	128806740	128806740	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN33	340348	broad.mit.edu	37	7	128806740	128806740	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TSPAN33	340348	broad.mit.edu	37	7	128806740	128806740	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTBK1	84630	broad.mit.edu	37	6	43225570	43225570	+	Silent	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC15	51112	broad.mit.edu	37	2	3447501	3447501	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC15	51112	broad.mit.edu	37	2	3447501	3447501	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC15	51112	broad.mit.edu	37	2	3447501	3447501	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC39B	158219	broad.mit.edu	37	9	15225903	15225903	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC39B	158219	broad.mit.edu	37	9	15225903	15225903	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC39B	158219	broad.mit.edu	37	9	15225903	15225903	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL11	158135	broad.mit.edu	37	9	124751501	124751501	+	Silent	SNP	C	G	G	rs144762491		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL11	158135	broad.mit.edu	37	9	124751501	124751501	+	Silent	SNP	C	G	G	rs144762491		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL11	158135	broad.mit.edu	37	9	124751501	124751501	+	Silent	SNP	C	G	G	rs144762491		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL4	9654	broad.mit.edu	37	2	219611895	219611895	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL9	164395	broad.mit.edu	37	20	30458921	30458921	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL9	164395	broad.mit.edu	37	20	30458921	30458921	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTLL9	164395	broad.mit.edu	37	20	30458921	30458921	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179457057	179457057	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179592523	179592523	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179457057	179457057	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179592523	179592523	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179443719	179443719	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179457057	179457057	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179567141	179567141	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179592523	179592523	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH1	57348	broad.mit.edu	37	19	54942231	54942231	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72245630	72245630	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72245630	72245630	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTYH2	94015	broad.mit.edu	37	17	72245630	72245630	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBA4B	80086	broad.mit.edu	37	2	220136384	220136384	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4Q	56604	broad.mit.edu	37	4	190904302	190904302	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB4Q	56604	broad.mit.edu	37	4	190904302	190904302	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUB	7275	broad.mit.edu	37	11	8061246	8061246	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUB	7275	broad.mit.edu	37	11	8061246	8061246	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUSC3	7991	broad.mit.edu	37	8	15546646	15546646	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48069580	48069580	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48069582	48069582	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48114498	48114498	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48069580	48069580	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48069582	48069582	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48114498	48114498	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48069580	48069580	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48069582	48069582	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXK	7294	broad.mit.edu	37	4	48114498	48114498	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC11	51061	broad.mit.edu	37	16	11791947	11791947	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC11	51061	broad.mit.edu	37	16	11791947	11791947	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC11	51061	broad.mit.edu	37	16	11791947	11791947	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC12	51060	broad.mit.edu	37	1	52486661	52486661	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC12	51060	broad.mit.edu	37	1	52486661	52486661	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC12	51060	broad.mit.edu	37	1	52486661	52486661	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC3	51314	broad.mit.edu	37	7	37901757	37901757	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC3	51314	broad.mit.edu	37	7	37901757	37901757	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TXNDC3	51314	broad.mit.edu	37	7	37901757	37901757	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2Q2	92912	broad.mit.edu	37	15	76168366	76168366	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2Q2	92912	broad.mit.edu	37	15	76168366	76168366	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBP1	7342	broad.mit.edu	37	3	33467035	33467035	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBP1	7342	broad.mit.edu	37	3	33467035	33467035	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBP1	7342	broad.mit.edu	37	3	33467035	33467035	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19432177	19432177	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCHL3	7347	broad.mit.edu	37	13	76134927	76134927	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCMA	221044	broad.mit.edu	37	10	13264144	13264144	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCMA	221044	broad.mit.edu	37	10	13264144	13264144	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UCMA	221044	broad.mit.edu	37	10	13264144	13264144	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGDH	7358	broad.mit.edu	37	4	39515801	39515801	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGDH	7358	broad.mit.edu	37	4	39515801	39515801	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGDH	7358	broad.mit.edu	37	4	39515801	39515801	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234669911	234669911	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234669911	234669911	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT1A5	54579	broad.mit.edu	37	2	234669911	234669911	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A1	10941	broad.mit.edu	37	4	70513291	70513291	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A1	10941	broad.mit.edu	37	4	70513291	70513291	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A1	10941	broad.mit.edu	37	4	70513291	70513291	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A3	79799	broad.mit.edu	37	4	69811061	69811061	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A3	79799	broad.mit.edu	37	4	69811061	69811061	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2A3	79799	broad.mit.edu	37	4	69811061	69811061	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70070510	70070510	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70071072	70071072	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70070510	70070510	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B11	10720	broad.mit.edu	37	4	70071072	70071072	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A2	167127	broad.mit.edu	37	5	36066766	36066766	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A2	167127	broad.mit.edu	37	5	36066766	36066766	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT3A2	167127	broad.mit.edu	37	5	36066766	36066766	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41860964	41860964	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41861077	41861077	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41860964	41860964	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41861077	41861077	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41860964	41860964	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ULK4	54986	broad.mit.edu	37	3	41861077	41861077	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43524089	43524089	+	Missense_Mutation	SNP	G	T	T	rs150059583		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43524089	43524089	+	Missense_Mutation	SNP	G	T	T	rs150059583		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43524089	43524089	+	Missense_Mutation	SNP	G	T	T	rs150059583		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMOD	7369	broad.mit.edu	37	16	20360484	20360484	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMOD	7369	broad.mit.edu	37	16	20360484	20360484	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMOD	7369	broad.mit.edu	37	16	20360484	20360484	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54307745	54307745	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54307745	54307745	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC13C	440279	broad.mit.edu	37	15	54307745	54307745	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45A	55898	broad.mit.edu	37	15	91483497	91483497	+	Intron	SNP	G	T	T	rs143205426	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45A	55898	broad.mit.edu	37	15	91483497	91483497	+	Intron	SNP	G	T	T	rs143205426	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45A	55898	broad.mit.edu	37	15	91483497	91483497	+	Intron	SNP	G	T	T	rs143205426	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33513590	33513590	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33513590	33513590	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45B	146862	broad.mit.edu	37	17	33513590	33513590	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73047403	73047403	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73047403	73047403	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73047403	73047403	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5B	219699	broad.mit.edu	37	10	73051161	73051161	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC80	285175	broad.mit.edu	37	2	210674228	210674228	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC80	285175	broad.mit.edu	37	2	210674228	210674228	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC80	285175	broad.mit.edu	37	2	210674228	210674228	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC93A	54346	broad.mit.edu	37	6	167711255	167711255	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC93A	54346	broad.mit.edu	37	6	167717626	167717626	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC93A	54346	broad.mit.edu	37	6	167711255	167711255	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC93A	54346	broad.mit.edu	37	6	167717626	167717626	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC93A	54346	broad.mit.edu	37	6	167717626	167717626	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPRT	139596	broad.mit.edu	37	X	74520800	74520800	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216051129	216051129	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216143975	216143975	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216221758	216221758	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216496873	216496873	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216595085	216595085	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216051129	216051129	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216143975	216143975	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216221758	216221758	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216496873	216496873	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216595085	216595085	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216051129	216051129	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216143975	216143975	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216496873	216496873	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216595085	216595085	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USHBP1	83878	broad.mit.edu	37	19	17373540	17373540	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USHBP1	83878	broad.mit.edu	37	19	17373540	17373540	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USHBP1	83878	broad.mit.edu	37	19	17373540	17373540	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USO1	8615	broad.mit.edu	37	4	76703986	76703986	+	Missense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP31	57478	broad.mit.edu	37	16	23116931	23116931	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP31	57478	broad.mit.edu	37	16	23116931	23116931	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP31	57478	broad.mit.edu	37	16	23116931	23116931	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58289532	58289533	+	Intron	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP34	9736	broad.mit.edu	37	2	61505418	61505418	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP54	159195	broad.mit.edu	37	10	75290091	75290091	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP54	159195	broad.mit.edu	37	10	75290091	75290091	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP54	159195	broad.mit.edu	37	10	75290091	75290091	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP5	8078	broad.mit.edu	37	12	6975138	6975138	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP5	8078	broad.mit.edu	37	12	6975138	6975138	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP5	8078	broad.mit.edu	37	12	6975138	6975138	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5045714	5045714	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5045714	5045714	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP6	9098	broad.mit.edu	37	17	5045714	5045714	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8989091	8989091	+	Intron	DEL	A	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8989091	8989091	+	Intron	DEL	A	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP7	7874	broad.mit.edu	37	16	8989091	8989091	+	Intron	DEL	A	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP8	9101	broad.mit.edu	37	15	50741619	50741619	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP8	9101	broad.mit.edu	37	15	50741619	50741619	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP8	9101	broad.mit.edu	37	15	50741619	50741619	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41043661	41043661	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41043661	41043661	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP9X	8239	broad.mit.edu	37	X	41043661	41043661	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	122892687	122892687	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	130659	130659	+	IGR	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134957142	134957142	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	27638581	27638581	+	IGR	SNP	C	A	A	rs2800389		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	28725818	28725818	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38931101	38931101	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	49873797	49873797	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	71283227	71283227	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	93525912	93525912	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	110976342	110976342	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	123894693	123894693	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	124252265	124252265	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	33258787	33258787	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	47212836	47212836	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49008979	49008979	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49455788	49455788	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50205776	50205776	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51527720	51527720	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55070111	55070111	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55979216	55979216	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56099056	56099056	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56102685	56102685	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	82517021	82517021	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	82517533	82517533	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	85906412	85906412	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	90848183	90848183	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	106566008	106566008	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43964335	43964335	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68430167	68430167	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80496777	80496777	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98711647	98711647	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53983585	53983585	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65533497	65533497	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68476579	68476580	+	IGR	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	77559350	77559350	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	88545467	88545467	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19413227	19413227	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20146237	20146237	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147586	20147586	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20264406	20264406	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20389760	20389760	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22070103	22070103	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45329849	45329849	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45331525	45331525	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	55696164	55696164	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	63589966	63589966	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95098484	95098484	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	96103341	96103341	+	IGR	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20456818	20456818	+	IGR	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20482099	20482099	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21365605	21365605	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	35142249	35142249	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	50087268	50087268	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	79529172	79529172	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84957462	84957472	+	IGR	DEL	GTGGCATCTGT	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	18488407	18488407	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	20613912	20613912	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	25465763	25465763	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32926598	32926598	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33123817	33123817	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33404682	33404683	+	IGR	INS	-	TAG	TAG	rs6565349		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33752714	33752714	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33768548	33768548	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	50092244	50092244	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	51098173	51098173	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	52689580	52689580	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	14673626	14673626	+	IGR	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20688296	20688296	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21827751	21827751	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26076839	26076839	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51834535	51834535	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60320624	60320624	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	70623373	70623373	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11609800	11609800	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	12791	12791	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	29547020	29547020	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	47645	47645	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	5002761	5002761	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23185727	23185728	+	IGR	INS	-	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23675801	23675801	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35034902	35034910	+	IGR	DEL	AGAAACTTC	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	55209275	55209275	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	104470429	104470429	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106434668	106434668	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	1439060	1439060	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	155560493	155560493	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158850769	158850769	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166246391	166246391	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	168338285	168338285	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	17008483	17008484	+	IGR	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	179556070	179556070	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	189959433	189959433	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	189960583	189960583	+	IGR	SNP	G	A	A	rs34729390		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	199878449	199878449	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	219784855	219784856	+	IGR	INS	-	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242156856	242156856	+	IGR	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248604735	248604735	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248604868	248604868	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	91646240	91646240	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10614531	10614531	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14899239	14899239	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14916727	14916728	+	IGR	DEL	CA	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	32433293	32433293	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	40250877	40250877	+	IGR	SNP	T	A	A	rs77542226	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16405864	16405864	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17402277	17402277	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	18851271	18851271	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	127315181	127315181	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210010356	210010356	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210044987	210044987	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210045148	210045148	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34065671	34065671	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	42047140	42047140	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	4561814	4561814	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	6636192	6636192	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81423541	81423541	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81426589	81426589	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91888436	91888436	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116365492	116365492	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137484405	137484405	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	161042846	161042846	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180040997	180040997	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	197838555	197838555	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	82856212	82856212	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97926377	97926377	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	116842549	116842549	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13340113	13340113	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13633524	13633524	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165864903	165864903	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189309235	189309235	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189309411	189309411	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190396461	190396461	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	36508726	36508726	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	387363	387363	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	43901159	43901159	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69170461	69170461	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69403248	69403248	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69893782	69893782	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69997971	69997971	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70255554	70255555	+	IGR	DNP	CC	AT	AT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9387485	9387485	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9699756	9699756	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	120911783	120911783	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	144608848	144608848	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	174350801	174350801	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	175467726	175467737	+	IGR	DEL	TCAAAGACCTGC	-	-	rs60689940		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32523995	32523995	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40066780	40066780	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	44304986	44304986	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	77081470	77081470	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	98016975	98016975	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	99284493	99284493	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	100584323	100584323	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121975262	121975262	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	153603438	153603438	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	18368050	18368050	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27529337	27529337	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29231962	29231962	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	53219621	53219621	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	149031617	149031617	+	IGR	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	159026043	159026043	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53256479	53256479	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53256481	53256481	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55002000	55002000	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55311969	55311969	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56296691	56296691	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56355986	56355986	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56356117	56356117	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56431318	56431318	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56431320	56431320	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56665617	56665617	+	IGR	DEL	A	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	61822074	61822074	+	IGR	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62669769	62669769	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63028241	63028241	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	65082694	65082694	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	6874544	6874544	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	72333268	72333268	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	75747280	75747280	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	75761262	75761262	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9766110	9766110	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	125932780	125932781	+	IGR	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	41369049	41369049	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	62115649	62115649	+	IGR	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	70041997	70041997	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	76289198	76289198	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88801694	88801694	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	92922170	92922170	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	103494099	103494099	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	107366863	107366863	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109933189	109933189	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	2876033	2876033	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29824798	29824798	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43400459	43400459	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44153936	44153936	+	IGR	SNP	G	T	T	rs148108535	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44170595	44170595	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78017348	78017348	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78017362	78017362	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78842563	78842563	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84672709	84672709	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90414458	90414458	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108812295	108812295	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134345966	134345966	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134811822	134811822	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26179560	26179560	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	30648607	30648607	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37401362	37401362	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	49397161	49397161	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	49431881	49431881	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	86958338	86958338	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89368476	89368476	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	122114156	122114157	+	IGR	DEL	TT	-	-	rs146890294		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	122892687	122892687	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	130659	130659	+	IGR	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134957142	134957142	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	28725818	28725818	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38931101	38931101	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	49873797	49873797	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	71283227	71283227	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	93525912	93525912	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	110976342	110976342	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	123894693	123894693	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	124252265	124252265	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	33258787	33258787	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	47212836	47212836	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49008979	49008979	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49455788	49455788	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	50205776	50205776	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51527720	51527720	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55070111	55070111	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55979216	55979216	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56099056	56099056	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56102685	56102685	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	82517021	82517021	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	82517533	82517533	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	85906412	85906412	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	90848183	90848183	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	106566008	106566008	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	34362548	34362548	+	IGR	SNP	C	A	A	rs137940241		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43964335	43964335	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68430167	68430167	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80496777	80496777	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98711647	98711647	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53983585	53983585	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65533497	65533497	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68476579	68476580	+	IGR	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	77559350	77559350	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	88545467	88545467	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19413227	19413227	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20146237	20146237	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147586	20147586	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20264406	20264406	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20389760	20389760	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22070103	22070103	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45329849	45329849	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45331525	45331525	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	55696164	55696164	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	63589966	63589966	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95098484	95098484	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	96103341	96103341	+	IGR	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20456818	20456818	+	IGR	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20482099	20482099	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21365605	21365605	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31085375	31085375	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	35142249	35142249	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	50087268	50087268	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	79529172	79529172	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	18488406	18488407	+	IGR	DNP	GG	TA	TA			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	25465763	25465763	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32926598	32926598	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33123817	33123817	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33752714	33752714	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33768548	33768548	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	50092244	50092244	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	51098173	51098173	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	52689580	52689580	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	14673626	14673626	+	IGR	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20688296	20688296	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21827751	21827751	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	25289395	25289395	+	IGR	DEL	T	-	-	rs113949263		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26076839	26076839	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	28880659	28880660	+	IGR	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51834535	51834535	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51835079	51835079	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	60320624	60320624	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	70623373	70623373	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11609800	11609800	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	12791	12791	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	29547020	29547020	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	47645	47645	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	5002761	5002761	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23185727	23185728	+	IGR	INS	-	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23675801	23675801	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	35034902	35034910	+	IGR	DEL	AGAAACTTC	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	55209275	55209275	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	104470429	104470429	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106434668	106434668	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	117256890	117256890	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	1439060	1439060	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	155560493	155560493	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158850769	158850769	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166246391	166246391	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	168338285	168338285	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	17008483	17008484	+	IGR	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	179556070	179556070	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	189959433	189959433	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	189960583	189960583	+	IGR	SNP	G	A	A	rs34729390		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	199878449	199878449	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	219784855	219784856	+	IGR	INS	-	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242156856	242156856	+	IGR	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248604735	248604735	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248604868	248604868	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	51695693	51695693	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	91646240	91646240	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10614531	10614531	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14899239	14899239	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14916727	14916728	+	IGR	DEL	CA	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	32433293	32433293	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	40250877	40250877	+	IGR	SNP	T	A	A	rs77542226	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16405864	16405864	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17402277	17402277	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	18851271	18851271	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	42546695	42546695	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	127315181	127315181	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210010356	210010356	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210044987	210044987	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210045148	210045148	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34065671	34065671	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	42047140	42047140	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	4561814	4561814	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	6636192	6636192	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81423541	81423541	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90464845	90464846	+	IGR	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91888436	91888436	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	11942741	11942741	+	IGR	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	137484405	137484405	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	161042846	161042846	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180040997	180040997	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	197838555	197838555	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	82856212	82856212	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97926377	97926377	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	116842549	116842549	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13340113	13340113	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13633524	13633524	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165864903	165864903	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189309235	189309235	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189309411	189309411	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	190396461	190396461	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	387363	387363	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	43901159	43901159	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69170461	69170461	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69403248	69403248	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69893782	69893782	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69997971	69997971	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70255554	70255555	+	IGR	DNP	CC	AT	AT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9387485	9387485	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9699756	9699756	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	120911783	120911783	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	120952361	120952361	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	144608848	144608848	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	174350801	174350801	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32523995	32523995	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40066780	40066780	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	44304986	44304986	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	77081470	77081470	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	98016975	98016975	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	99284493	99284493	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	100584323	100584323	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121975262	121975262	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	153603438	153603438	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	18368050	18368050	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27529337	27529337	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	29231962	29231962	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	53219621	53219621	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	149031617	149031617	+	IGR	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	159026043	159026043	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53256479	53256479	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53256481	53256481	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55002000	55002000	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56296691	56296691	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56355986	56355986	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56356117	56356117	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56431318	56431318	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56431320	56431320	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56665617	56665617	+	IGR	DEL	A	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57268861	57268861	+	IGR	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62669769	62669769	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63028241	63028241	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63033734	63033734	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	65082694	65082694	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	6874544	6874544	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	72333268	72333268	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	75761262	75761262	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9766110	9766110	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	34180956	34180956	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	41369049	41369049	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	62115649	62115649	+	IGR	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	70041997	70041997	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	76289198	76289198	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	81178367	81178367	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88801694	88801694	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	103494099	103494099	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	107366863	107366863	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109933189	109933189	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	2876033	2876033	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29824798	29824798	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43400459	43400459	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44153936	44153936	+	IGR	SNP	G	T	T	rs148108535	by1000genomes	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44170595	44170595	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78842563	78842563	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90414458	90414458	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108812295	108812295	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134345966	134345966	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134811822	134811822	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26179560	26179560	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26523098	26523098	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	30648607	30648607	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37401362	37401362	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	49397161	49397161	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	49431881	49431881	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	51646826	51646826	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	86958338	86958338	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	89368476	89368476	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13266473	13266473	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	28817314	28817314	+	IGR	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	122892687	122892687	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	124558329	124558329	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	130659	130659	+	IGR	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	28725818	28725818	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	38931101	38931101	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	71539005	71539005	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	93525912	93525912	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	110976342	110976342	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	124252265	124252265	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18993629	18993629	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	33258787	33258787	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	40105754	40105754	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	43543948	43543948	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	47212836	47212836	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49008979	49008979	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49455788	49455788	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	4994898	4994898	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	5058416	5058416	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	51527720	51527720	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55070111	55070111	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	55979216	55979216	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56099056	56099056	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	56102685	56102685	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	71604686	71604686	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	82517021	82517021	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	82517533	82517533	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	86006606	86006606	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	87191889	87191889	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	90848183	90848183	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	106566008	106566008	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	33607254	33607254	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	43964335	43964335	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	68430167	68430167	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80496777	80496777	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	98711647	98711647	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19600530	19600530	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	19761293	19761293	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	26693102	26693102	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	34657172	34657172	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	49785766	49785766	+	IGR	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	52892149	52892149	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53983585	53983585	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65532197	65532197	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65532303	65532303	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	65533497	65533497	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	67841455	67841455	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	68477246	68477246	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	77559350	77559350	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20146237	20146237	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20264406	20264406	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20389760	20389760	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22070103	22070103	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	44010129	44010129	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45329849	45329849	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	45331525	45331525	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	52755378	52755378	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	55696164	55696164	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	56010686	56010686	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	63589966	63589966	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	95098484	95098484	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20482099	20482099	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	20833768	20833768	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21365605	21365605	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	31085448	31085448	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	35142249	35142249	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	50087268	50087268	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	79529172	79529172	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	21396860	21396860	+	IGR	DEL	T	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	25465763	25465763	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32926598	32926598	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33123817	33123817	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33544471	33544471	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33752714	33752714	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	33768548	33768548	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	52689580	52689580	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	14673626	14673626	+	IGR	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20688296	20688296	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	21827751	21827751	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	26076839	26076839	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	28880659	28880660	+	IGR	DNP	GG	TT	TT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	3020332	3020332	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51759129	51759129	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51834535	51834535	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	51835079	51835079	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52031884	52031884	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	70623373	70623373	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	11609800	11609800	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	1927822	1927822	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	22102459	22102459	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	29547020	29547020	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	47645	47645	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	5002761	5002761	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	22868464	22868464	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23675801	23675801	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	55209275	55209275	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	104470429	104470429	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	106434668	106434668	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	117256890	117256890	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120336596	120336596	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	121244671	121244671	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	152716908	152716908	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158165535	158165535	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	166246391	166246391	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	168338285	168338285	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	17008483	17008484	+	IGR	DNP	GG	TT	TT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	172855117	172855117	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	179556070	179556070	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	189959433	189959433	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	189960583	189960583	+	IGR	SNP	G	A	A	rs34729390		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	191115970	191115970	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	199865156	199865156	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	199878449	199878449	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	242156856	242156856	+	IGR	DEL	C	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248604735	248604735	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248604868	248604868	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	30128981	30128981	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	38539895	38539895	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	5050112	5050113	+	IGR	DEL	TC	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	51695693	51695693	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	68037285	68037285	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	80748951	80748951	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	82547172	82547172	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	11601754	11601754	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	53303464	53303464	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	11181127	11181127	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14899239	14899239	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	14916727	14916728	+	IGR	DEL	CA	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	32433293	32433293	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	40250877	40250877	+	IGR	SNP	T	A	A	rs77542226	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16405864	16405864	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16651872	16651872	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	17402277	17402277	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	18851271	18851271	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	104240184	104240184	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	112501670	112501670	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	127315181	127315181	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	201022802	201022802	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210010356	210010356	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210044987	210044987	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	210045148	210045148	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	34065671	34065671	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	42047140	42047140	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	4561814	4561814	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	52303219	52303219	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	56977865	56977865	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	6636192	6636192	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	6636740	6636740	+	IGR	SNP	G	A	A	rs112128793		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81425960	81425960	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	81426589	81426589	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91795568	91795568	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800170	91800170	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800508	91800508	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91800999	91800999	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91888436	91888436	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	96464307	96464307	+	IGR	SNP	C	G	G	rs2696732	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	100882641	100882641	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	116365492	116365492	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	11942741	11942741	+	IGR	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	125475052	125475052	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	139449783	139449783	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	152518394	152518394	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	161042846	161042846	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	177015631	177015631	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	180040997	180040997	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	6814722	6814722	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	82856212	82856212	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	97926377	97926377	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	116842549	116842549	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	130966776	130966776	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13340113	13340113	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	13978938	13978938	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	14265355	14265355	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	161015590	161015590	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	163906112	163906112	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165864903	165864903	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	175939853	175939853	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189309235	189309235	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189309411	189309411	+	IGR	DEL	G	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189745547	189745547	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	26113948	26113948	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	387363	387363	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	43901159	43901159	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69170461	69170461	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69403248	69403248	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69893782	69893782	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70172530	70172530	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70255554	70255555	+	IGR	DNP	CC	AT	AT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9387485	9387485	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9523702	9523702	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	9699756	9699756	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	120911783	120911783	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	120952251	120952251	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	120952361	120952361	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	13638489	13638489	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	144608848	144608848	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15451073	15451073	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	174350801	174350801	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	23689112	23689112	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	25910473	25910473	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	28850522	28850522	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	32523995	32523995	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40066780	40066780	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	40066792	40066792	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	44304986	44304986	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	77081470	77081470	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	86180667	86180667	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	8726426	8726426	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	98016975	98016975	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	99284493	99284493	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	99333234	99333234	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	100584060	100584060	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	100584323	100584323	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	121975262	121975262	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	18368050	18368050	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27478452	27478452	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27529337	27529337	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	53219621	53219621	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	54467541	54467541	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	10516315	10516315	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	145281611	145281611	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	149031617	149031617	+	IGR	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	150239035	150239035	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	159026043	159026043	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	20042871	20042871	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53256479	53256479	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	53256481	53256481	+	IGR	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55002000	55002000	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55003551	55003551	+	IGR	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55311969	55311969	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55778952	55778952	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56296691	56296691	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56355986	56355986	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56356117	56356117	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56665617	56665617	+	IGR	DEL	A	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	56804193	56804193	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57268861	57268861	+	IGR	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	62669769	62669769	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63028241	63028241	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63033734	63033734	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	64323698	64323698	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	65082694	65082694	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	75761262	75761262	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	110911512	110911512	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	125932780	125932781	+	IGR	DNP	GG	TT	TT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	41369049	41369049	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	62115649	62115649	+	IGR	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	70041997	70041997	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	76289198	76289198	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	82530410	82530410	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	83204252	83204252	+	IGR	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88801694	88801694	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	88933558	88933558	+	IGR	SNP	A	C	C	rs80061971	byFrequency;by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	92922170	92922170	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	98637111	98637111	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	103494099	103494099	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109933189	109933189	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	2876033	2876033	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29824798	29824798	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43399933	43399934	+	IGR	DNP	AG	GT	GT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43400459	43400459	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44148347	44148347	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	44153936	44153936	+	IGR	SNP	G	T	T	rs148108535	by1000genomes	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	52547	52547	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	67293747	67293747	+	IGR	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68357810	68357810	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	69499031	69499031	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	74204437	74204437	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78017242	78017242	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78017348	78017348	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	78017362	78017362	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84672709	84672709	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90414458	90414458	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108812295	108812295	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134345966	134345966	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134811822	134811822	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	134812375	134812375	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	135889510	135889510	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	139479275	139479275	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	141260849	141260849	+	IGR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	147280342	147280342	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	26179560	26179560	+	IGR	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	30648607	30648607	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	37401362	37401362	+	IGR	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	49397161	49397161	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	49431881	49431881	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	51646826	51646826	+	IGR	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	55660973	55660973	+	IGR	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	86958338	86958338	+	IGR	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	92477543	92477543	+	IGR	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV1	7409	broad.mit.edu	37	19	6837126	6837126	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV1	7409	broad.mit.edu	37	19	6837126	6837126	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAX2	25806	broad.mit.edu	37	2	71160340	71160340	+	3'UTR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAX2	25806	broad.mit.edu	37	2	71160340	71160340	+	3'UTR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82837202	82837202	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82837202	82837202	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAN	1462	broad.mit.edu	37	5	82837202	82837202	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIPAR	63894	broad.mit.edu	37	14	77907505	77907505	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIPAR	63894	broad.mit.edu	37	14	77907505	77907505	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIPAR	63894	broad.mit.edu	37	14	77907505	77907505	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100779108	100779121	+	Frame_Shift_Del	DEL	TCAATCTCGTGAAT	-	-	rs145846582		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100779108	100779121	+	Frame_Shift_Del	DEL	TCAATCTCGTGAAT	-	-	rs145846582		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100779108	100779121	+	Frame_Shift_Del	DEL	TCAATCTCGTGAAT	-	-	rs145846582		TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13B	157680	broad.mit.edu	37	8	100883150	100883150	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62264919	62264919	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62264919	62264919	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13C	54832	broad.mit.edu	37	15	62264919	62264919	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS16	64601	broad.mit.edu	37	20	2840774	2840774	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS16	64601	broad.mit.edu	37	20	2840774	2840774	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS16	64601	broad.mit.edu	37	20	2840774	2840774	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS35	55737	broad.mit.edu	37	16	46715307	46715307	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS35	55737	broad.mit.edu	37	16	46715307	46715307	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS35	55737	broad.mit.edu	37	16	46715307	46715307	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS37C	55048	broad.mit.edu	37	11	60899828	60899828	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS37C	55048	broad.mit.edu	37	11	60899828	60899828	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS4A	27183	broad.mit.edu	37	16	69356724	69356724	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS8	23355	broad.mit.edu	37	3	184587421	184587421	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS8	23355	broad.mit.edu	37	3	184632747	184632747	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS8	23355	broad.mit.edu	37	3	184587421	184587421	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS8	23355	broad.mit.edu	37	3	184632747	184632747	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS8	23355	broad.mit.edu	37	3	184587421	184587421	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS8	23355	broad.mit.edu	37	3	184632747	184632747	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSIG4	11326	broad.mit.edu	37	X	65252542	65252542	+	Silent	SNP	C	T	T	rs147948024	byFrequency	TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSNL1	7447	broad.mit.edu	37	2	17830660	17830660	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSNL1	7447	broad.mit.edu	37	2	17836616	17836616	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSNL1	7447	broad.mit.edu	37	2	17830660	17830660	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSNL1	7447	broad.mit.edu	37	2	17836616	17836616	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSNL1	7447	broad.mit.edu	37	2	17830660	17830660	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSNL1	7447	broad.mit.edu	37	2	17836616	17836616	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM2A	222008	broad.mit.edu	37	7	54612473	54612473	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM2A	222008	broad.mit.edu	37	7	54617601	54617601	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM2A	222008	broad.mit.edu	37	7	54612473	54612473	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM2A	222008	broad.mit.edu	37	7	54617601	54617601	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM2A	222008	broad.mit.edu	37	7	54617601	54617601	+	Missense_Mutation	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA5A	4013	broad.mit.edu	37	11	124007382	124007382	+	Splice_Site	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA5A	4013	broad.mit.edu	37	11	124007382	124007382	+	Splice_Site	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWA5A	4013	broad.mit.edu	37	11	124007382	124007382	+	Splice_Site	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6135206	6135206	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6135206	6135206	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VWF	7450	broad.mit.edu	37	12	6135206	6135206	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WAC	51322	broad.mit.edu	37	10	28824470	28824470	+	Intron	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WAPAL	23063	broad.mit.edu	37	10	88220279	88220279	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WAPAL	23063	broad.mit.edu	37	10	88220279	88220279	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WAPAL	23063	broad.mit.edu	37	10	88220279	88220279	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119619185	119619185	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119619185	119619185	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WARS2	10352	broad.mit.edu	37	1	119619185	119619185	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71142007	71142007	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71142007	71142007	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WBSCR17	64409	broad.mit.edu	37	7	71142007	71142007	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR27	253769	broad.mit.edu	37	6	170088913	170088913	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR27	253769	broad.mit.edu	37	6	170088913	170088913	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR27	253769	broad.mit.edu	37	6	170088913	170088913	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR35	57539	broad.mit.edu	37	2	20133236	20133237	+	Frame_Shift_Del	DEL	CA	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR35	57539	broad.mit.edu	37	2	20133236	20133237	+	Frame_Shift_Del	DEL	CA	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR35	57539	broad.mit.edu	37	2	20133236	20133237	+	Frame_Shift_Del	DEL	CA	-	-			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110432718	110432718	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110446486	110446486	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110454587	110454587	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110432718	110432718	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110446486	110446486	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110440497	110440497	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR36	134430	broad.mit.edu	37	5	110446486	110446486	+	Splice_Site	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR52	55779	broad.mit.edu	37	3	113084798	113084798	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR52	55779	broad.mit.edu	37	3	113084798	113084798	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR52	55779	broad.mit.edu	37	3	113084798	113084798	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR65	149465	broad.mit.edu	37	1	43638557	43638557	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR65	149465	broad.mit.edu	37	1	43638557	43638557	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR65	149465	broad.mit.edu	37	1	43638557	43638557	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR78	79819	broad.mit.edu	37	1	67340411	67340411	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDTC1	23038	broad.mit.edu	37	1	27630328	27630328	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDTC1	23038	broad.mit.edu	37	1	27630328	27630328	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDTC1	23038	broad.mit.edu	37	1	27630328	27630328	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDYHV1	55093	broad.mit.edu	37	8	124449458	124449458	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDYHV1	55093	broad.mit.edu	37	8	124449458	124449458	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDYHV1	55093	broad.mit.edu	37	8	124449458	124449458	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1	7468	broad.mit.edu	37	4	1937166	1937166	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WHSC1	7468	broad.mit.edu	37	4	1937166	1937166	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WIPF3	644150	broad.mit.edu	37	7	29924315	29924315	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WLS	79971	broad.mit.edu	37	1	68628638	68628638	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WLS	79971	broad.mit.edu	37	1	68628638	68628638	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WLS	79971	broad.mit.edu	37	1	68628638	68628638	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	990233	990233	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	990233	990233	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK1	65125	broad.mit.edu	37	12	990233	990233	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	96062329	96062329	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	96062329	96062329	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK2	65268	broad.mit.edu	37	9	96062329	96062329	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNK4	65266	broad.mit.edu	37	17	40940775	40940775	+	Missense_Mutation	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT3A	89780	broad.mit.edu	37	1	228248008	228248008	+	3'UTR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WNT3A	89780	broad.mit.edu	37	1	228248008	228248008	+	3'UTR	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31605846	31605846	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31605846	31605846	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XDH	7498	broad.mit.edu	37	2	31605846	31605846	+	Intron	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73066574	73066574	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73066574	73066574	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIST	7503	broad.mit.edu	37	X	73066574	73066574	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO6	23214	broad.mit.edu	37	16	28118754	28118755	+	Intron	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO6	23214	broad.mit.edu	37	16	28146492	28146493	+	Intron	DEL	CA	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO6	23214	broad.mit.edu	37	16	28118754	28118755	+	Intron	INS	-	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO6	23214	broad.mit.edu	37	16	28146492	28146493	+	Intron	DEL	CA	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN2	22803	broad.mit.edu	37	20	21369903	21369903	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN2	22803	broad.mit.edu	37	20	21369903	21369903	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XRN2	22803	broad.mit.edu	37	20	21369903	21369903	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT2	64132	broad.mit.edu	37	17	48431645	48431645	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT2	64132	broad.mit.edu	37	17	48431645	48431645	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YARS2	51067	broad.mit.edu	37	12	32908775	32908775	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YARS2	51067	broad.mit.edu	37	12	32908775	32908775	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YARS2	51067	broad.mit.edu	37	12	32908775	32908775	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YIPF7	285525	broad.mit.edu	37	4	44626769	44626769	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YTHDF2	51441	broad.mit.edu	37	1	29070324	29070324	+	Silent	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YWHAG	7532	broad.mit.edu	37	7	75987970	75987970	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
YWHAG	7532	broad.mit.edu	37	7	75987970	75987970	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100350034	100350034	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100350034	100350034	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100382441	100382441	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED4	9889	broad.mit.edu	37	22	50277734	50277734	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED4	9889	broad.mit.edu	37	22	50277734	50277734	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBED4	9889	broad.mit.edu	37	22	50277734	50277734	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB40	9923	broad.mit.edu	37	1	22817990	22817990	+	Silent	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB40	9923	broad.mit.edu	37	1	22817990	22817990	+	Silent	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZBTB40	9923	broad.mit.edu	37	1	22817990	22817990	+	Silent	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H6	376940	broad.mit.edu	37	2	113089158	113089158	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H6	376940	broad.mit.edu	37	2	113089158	113089158	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC3H6	376940	broad.mit.edu	37	2	113089158	113089158	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC4H2	55906	broad.mit.edu	37	X	64139003	64139003	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC4H2	55906	broad.mit.edu	37	X	64139945	64139945	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC4H2	55906	broad.mit.edu	37	X	64139003	64139003	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC4H2	55906	broad.mit.edu	37	X	64139945	64139945	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC4H2	55906	broad.mit.edu	37	X	64139003	64139003	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZC4H2	55906	broad.mit.edu	37	X	64139945	64139945	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111698756	111698756	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZCCHC16	340595	broad.mit.edu	37	X	111698756	111698756	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDBF2	57683	broad.mit.edu	37	2	207172851	207172851	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZDHHC11	79844	broad.mit.edu	37	5	819583	819583	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31810643	31810643	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31810643	31810643	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZEB1	6935	broad.mit.edu	37	10	31810643	31810643	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72993508	72993509	+	Frame_Shift_Ins	INS	-	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72993508	72993509	+	Frame_Shift_Ins	INS	-	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72993508	72993509	+	Frame_Shift_Ins	INS	-	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77690476	77690476	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77766770	77766770	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77775904	77775904	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77690476	77690476	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77766770	77766770	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77768616	77768616	+	Intron	DEL	C	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77775904	77775904	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77616685	77616685	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77690476	77690476	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77766770	77766770	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX4	79776	broad.mit.edu	37	8	77775904	77775904	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106814424	106814424	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106814424	106814424	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFPM2	23414	broad.mit.edu	37	8	106814424	106814424	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIC1	7545	broad.mit.edu	37	3	147130652	147130652	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT4	79698	broad.mit.edu	37	8	40438795	40438795	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT4	79698	broad.mit.edu	37	8	40438795	40438795	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMAT4	79698	broad.mit.edu	37	8	40438795	40438795	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM1	79830	broad.mit.edu	37	1	35577246	35577246	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM4	9202	broad.mit.edu	37	1	35847281	35847281	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM4	9202	broad.mit.edu	37	1	35847281	35847281	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYM4	9202	broad.mit.edu	37	1	35847281	35847281	+	Silent	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND11	10771	broad.mit.edu	37	10	294355	294355	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND11	10771	broad.mit.edu	37	10	294355	294355	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZMYND11	10771	broad.mit.edu	37	10	294355	294355	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF131	7690	broad.mit.edu	37	5	43143573	43143573	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF131	7690	broad.mit.edu	37	5	43143573	43143573	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF131	7690	broad.mit.edu	37	5	43143573	43143573	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF215	7762	broad.mit.edu	37	11	6977816	6977816	+	3'UTR	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74587634	74587635	+	Intron	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74672732	74672732	+	Nonsense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74587634	74587635	+	Intron	DNP	GG	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74672732	74672732	+	Nonsense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74587634	74587635	+	Intron	DNP	GG	TT	TT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74617253	74617253	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74672732	74672732	+	Nonsense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF268	10795	broad.mit.edu	37	12	133779409	133779410	+	Nonsense_Mutation	DNP	GA	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF268	10795	broad.mit.edu	37	12	133779409	133779410	+	Nonsense_Mutation	DNP	GA	TT	TT			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF268	10795	broad.mit.edu	37	12	133779409	133779410	+	Nonsense_Mutation	DNP	GA	TT	TT			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF285	26974	broad.mit.edu	37	19	44891467	44891467	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF285	26974	broad.mit.edu	37	19	44891467	44891467	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF285	26974	broad.mit.edu	37	19	44891467	44891467	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF292	23036	broad.mit.edu	37	6	87966098	87966098	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF292	23036	broad.mit.edu	37	6	87966098	87966098	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF292	23036	broad.mit.edu	37	6	87966098	87966098	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF295	49854	broad.mit.edu	37	21	43412161	43412161	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF295	49854	broad.mit.edu	37	21	43412161	43412161	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF295	49854	broad.mit.edu	37	21	43412161	43412161	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF311	282890	broad.mit.edu	37	6	28971704	28971704	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF311	282890	broad.mit.edu	37	6	28971704	28971704	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF311	282890	broad.mit.edu	37	6	28971704	28971704	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF322A	79692	broad.mit.edu	37	6	26637670	26637670	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF346	23567	broad.mit.edu	37	5	176468253	176468253	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF346	23567	broad.mit.edu	37	5	176471260	176471260	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF346	23567	broad.mit.edu	37	5	176468253	176468253	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF346	23567	broad.mit.edu	37	5	176471260	176471260	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF346	23567	broad.mit.edu	37	5	176468253	176468253	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354C	30832	broad.mit.edu	37	5	178506336	178506336	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354C	30832	broad.mit.edu	37	5	178506336	178506336	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF354C	30832	broad.mit.edu	37	5	178506336	178506336	+	Silent	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF37B	100129482	broad.mit.edu	37	10	43015267	43015267	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF37B	100129482	broad.mit.edu	37	10	43015491	43015491	+	RNA	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF383	163087	broad.mit.edu	37	19	37733343	37733343	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF383	163087	broad.mit.edu	37	19	37733343	37733343	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385A	25946	broad.mit.edu	37	12	54767848	54767848	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385A	25946	broad.mit.edu	37	12	54767848	54767848	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF385A	25946	broad.mit.edu	37	12	54767848	54767848	+	Silent	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF417	147687	broad.mit.edu	37	19	58427738	58427738	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF417	147687	broad.mit.edu	37	19	58427738	58427738	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF417	147687	broad.mit.edu	37	19	58427738	58427738	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF419	79744	broad.mit.edu	37	19	58005013	58005013	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31047965	31047965	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31047965	31047965	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF536	9745	broad.mit.edu	37	19	31047965	31047965	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF560	147741	broad.mit.edu	37	19	9578614	9578614	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF592	9640	broad.mit.edu	37	15	85326477	85326477	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF592	9640	broad.mit.edu	37	15	85326477	85326477	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF592	9640	broad.mit.edu	37	15	85326477	85326477	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF680	340252	broad.mit.edu	37	7	63982636	63982636	+	Missense_Mutation	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF683	257101	broad.mit.edu	37	1	26688465	26688465	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF683	257101	broad.mit.edu	37	1	26688465	26688465	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF683	257101	broad.mit.edu	37	1	26688465	26688465	+	Missense_Mutation	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF713	349075	broad.mit.edu	37	7	55991322	55991322	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF713	349075	broad.mit.edu	37	7	55991322	55991322	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF713	349075	broad.mit.edu	37	7	55991322	55991322	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF735	730291	broad.mit.edu	37	7	63679984	63679984	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF746	155061	broad.mit.edu	37	7	149174740	149174740	+	Silent	SNP	G	C	C	rs145793561	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF746	155061	broad.mit.edu	37	7	149174740	149174740	+	Silent	SNP	G	C	C	rs145793561	byFrequency	TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF777	27153	broad.mit.edu	37	7	149128849	149128849	+	3'UTR	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88963931	88963931	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88963931	88963931	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF804B	219578	broad.mit.edu	37	7	88963931	88963931	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF813	126017	broad.mit.edu	37	19	53983467	53983467	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57829002	57829002	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57767249	57767249	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57829002	57829002	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57829002	57829002	+	Missense_Mutation	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP1	22917	broad.mit.edu	37	11	60636728	60636728	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP1	22917	broad.mit.edu	37	11	60636728	60636728	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP1	22917	broad.mit.edu	37	11	60636728	60636728	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP1	22917	broad.mit.edu	37	11	60636948	60636948	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP2	7783	broad.mit.edu	37	16	21217024	21217024	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP2	7783	broad.mit.edu	37	16	21217024	21217024	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP2	7783	broad.mit.edu	37	16	21217024	21217024	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP3	7784	broad.mit.edu	37	7	76054722	76054722	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP3	7784	broad.mit.edu	37	7	76054722	76054722	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238051764	238051764	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238051764	238051764	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238051764	238051764	+	Silent	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPLD1	131368	broad.mit.edu	37	3	102187730	102187730	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPLD1	131368	broad.mit.edu	37	3	102187730	102187730	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZPLD1	131368	broad.mit.edu	37	3	102187730	102187730	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB3	84083	broad.mit.edu	37	2	136262085	136262085	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN10	84891	broad.mit.edu	37	16	3139922	3139922	+	Missense_Mutation	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN18	65982	broad.mit.edu	37	19	58600081	58600081	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN18	65982	broad.mit.edu	37	19	58600081	58600081	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM3	140831	broad.mit.edu	37	20	44505620	44505620	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM3	140831	broad.mit.edu	37	20	44505620	44505620	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM3	140831	broad.mit.edu	37	20	44505620	44505620	+	Silent	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZW10	9183	broad.mit.edu	37	11	113621820	113621820	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZW10	9183	broad.mit.edu	37	11	113621820	113621820	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZW10	9183	broad.mit.edu	37	11	113621820	113621820	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	113661623	113661623	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31292033	31292033	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80765684	80765686	+	Intron	DEL	GAA	-	-	rs56017107		TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	9716997	9716997	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	95410454	95410454	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22205254	22205254	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22337510	22337510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22356183	22356183	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22459119	22459119	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22539228	22539228	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22555000	22555000	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22573745	22573745	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22951283	22951283	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22990940	22990940	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	73079340	73079340	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	28902489	28902490	+	Intron	INS	-	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	28596110	28596111	+	Intron	DEL	AA	-	-			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29124536	29124536	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	88620578	88620578	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	14254229	14254229	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23310779	23310779	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16255893	16255893	+	5'Flank	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133075938	133075938	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186672293	186672293	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	62373853	62373853	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89196831	89196831	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89266036	89266036	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89320098	89320098	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89470645	89470645	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89968497	89968497	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89976490	89976490	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90044273	90044273	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90154121	90154121	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	22423375	22423375	+	5'Flank	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	120116641	120116641	+	Silent	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165981615	165981615	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166615	85166615	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	33162774	33162774	+	RNA	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	1514420	1514420	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	124116525	124116525	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142124423	142124423	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142124502	142124502	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142168457	142168457	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55840936	55840936	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73341826	73341826	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	15001761	15001761	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84677323	84677323	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	103183538	103183538	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-11A-01D-1553-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	113661623	113661623	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31292033	31292033	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	9716997	9716997	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	95410454	95410454	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22205254	22205254	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22337510	22337510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22356183	22356183	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22459119	22459119	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22539228	22539228	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22555000	22555000	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22573745	22573745	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22951283	22951283	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22990940	22990940	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	73079340	73079340	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	28902489	28902490	+	Intron	INS	-	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29124536	29124536	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	88620578	88620578	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23310779	23310779	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16255893	16255893	+	5'Flank	SNP	T	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133075938	133075938	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186672293	186672293	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	62373853	62373853	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89196831	89196831	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89266036	89266036	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89320098	89320098	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89470645	89470645	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89968497	89968497	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89976490	89976490	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90044273	90044273	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90154121	90154121	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	22423375	22423375	+	5'Flank	SNP	T	G	G			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165981615	165981615	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166615	85166615	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	33162774	33162774	+	RNA	SNP	A	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	1514420	1514420	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	124116525	124116525	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142124423	142124423	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142124502	142124502	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142168457	142168457	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55840936	55840936	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	15001761	15001761	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84677323	84677323	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	103183538	103183538	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02D-0969-08	TCGA-44-2656-10A-01D-0969-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	113661623	113661623	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	31292033	31292033	+	Missense_Mutation	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	9716997	9716997	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	95410454	95410454	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22205254	22205254	+	RNA	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22337510	22337510	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22356183	22356183	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22459119	22459119	+	Intron	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22482110	22482110	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22539228	22539228	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22555000	22555000	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22951283	22951283	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	22990940	22990940	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	73079340	73079340	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	28902489	28902490	+	Intron	INS	-	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20332055	20332055	+	RNA	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	20332094	20332094	+	RNA	SNP	C	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	23310779	23310779	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	120077326	120077326	+	5'Flank	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	159336360	159336360	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16255893	16255893	+	5'Flank	SNP	T	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133075489	133075489	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	133075938	133075938	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186672293	186672293	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	62373853	62373853	+	Intron	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89196831	89196831	+	Intron	SNP	C	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89266036	89266036	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89320098	89320098	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89470645	89470645	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89568195	89568195	+	RNA	SNP	A	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89968497	89968497	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89976490	89976490	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90044273	90044273	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90154121	90154121	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	22423375	22423375	+	5'Flank	SNP	T	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165981615	165981615	+	Missense_Mutation	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166615	85166615	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	33162774	33162774	+	RNA	SNP	A	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	1514420	1514420	+	Intron	SNP	G	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	124116525	124116525	+	Missense_Mutation	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142045525	142045525	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142124423	142124423	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142124502	142124502	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142168457	142168457	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142423595	142423595	+	Intron	SNP	A	G	G			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	55840936	55840936	+	RNA	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	64321832	64321832	+	Intron	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	73341826	73341826	+	Intron	SNP	G	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	15001761	15001761	+	Intron	SNP	G	T	T			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84677323	84677323	+	5'Flank	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	90747884	90747884	+	Missense_Mutation	SNP	T	C	C			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	103183538	103183538	+	Intron	SNP	C	A	A			TCGA-44-2656-01A-02W-0928-08	TCGA-44-2656-10A-01W-0928-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
