Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
ABCA13	154664	broad.mit.edu	37	7	48450010	48450010	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA3	21	broad.mit.edu	37	16	2338148	2338148	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCA3	21	broad.mit.edu	37	16	2338148	2338148	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87160611	87160611	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB1	5243	broad.mit.edu	37	7	87160611	87160611	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48130791	48130791	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC12	94160	broad.mit.edu	37	16	48130791	48130791	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABL1	25	broad.mit.edu	37	9	133600327	133600327	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABL1	25	broad.mit.edu	37	9	133600327	133600327	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABL2	27	broad.mit.edu	37	1	179102283	179102283	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABL2	27	broad.mit.edu	37	1	179102283	179102283	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112171664	112171664	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACAD10	80724	broad.mit.edu	37	12	112171664	112171664	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACER1	125981	broad.mit.edu	37	19	6312483	6312483	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACER1	125981	broad.mit.edu	37	19	6312483	6312483	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACLY	47	broad.mit.edu	37	17	40040561	40040561	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACLY	47	broad.mit.edu	37	17	40040561	40040561	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156991375	156991375	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM19	8728	broad.mit.edu	37	5	156991375	156991375	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM28	10863	broad.mit.edu	37	8	24167591	24167591	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM28	10863	broad.mit.edu	37	8	24167591	24167591	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106967542	106967542	+	RNA	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106354285	106354285	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106967542	106967542	+	RNA	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS3	9508	broad.mit.edu	37	4	73149331	73149331	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS3	9508	broad.mit.edu	37	4	73149331	73149331	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100328036	100328036	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGL	178	broad.mit.edu	37	1	100328036	100328036	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPAT1	10554	broad.mit.edu	37	6	32138470	32138470	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCYL2	23382	broad.mit.edu	37	7	129037010	129037010	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AHCYL2	23382	broad.mit.edu	37	7	129037010	129037010	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKT2	208	broad.mit.edu	37	19	40746179	40746179	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKT2	208	broad.mit.edu	37	19	40746179	40746179	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG13	79868	broad.mit.edu	37	X	110980041	110980041	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALG13	79868	broad.mit.edu	37	X	110980041	110980041	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPP	250	broad.mit.edu	37	2	233244189	233244189	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALPP	250	broad.mit.edu	37	2	233244189	233244189	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALX1	8092	broad.mit.edu	37	12	85677280	85677280	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALX1	8092	broad.mit.edu	37	12	85677280	85677280	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD12	23253	broad.mit.edu	37	18	9195482	9195482	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD12	23253	broad.mit.edu	37	18	9195482	9195482	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD23	200539	broad.mit.edu	37	2	97506536	97506536	+	Silent	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD23	200539	broad.mit.edu	37	2	97506536	97506536	+	Silent	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	197954713	197954713	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD44	91526	broad.mit.edu	37	2	197954713	197954713	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APCDD1	147495	broad.mit.edu	37	18	10468329	10468329	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APCDD1	147495	broad.mit.edu	37	18	10468329	10468329	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3D	140564	broad.mit.edu	37	22	39418930	39418930	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3D	140564	broad.mit.edu	37	22	39421508	39421508	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3D	140564	broad.mit.edu	37	22	39418930	39418930	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APOBEC3D	140564	broad.mit.edu	37	22	39421508	39421508	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGAP1	55738	broad.mit.edu	37	20	61916199	61916199	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARFGAP1	55738	broad.mit.edu	37	20	61916199	61916199	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP15	55843	broad.mit.edu	37	2	143973859	143973859	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP15	55843	broad.mit.edu	37	2	143973859	143973859	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP29	9411	broad.mit.edu	37	1	94667211	94667211	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP29	9411	broad.mit.edu	37	1	94667211	94667211	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131140160	131140160	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASAP1	50807	broad.mit.edu	37	8	131140160	131140160	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB7	140460	broad.mit.edu	37	15	101170058	101170058	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASB7	140460	broad.mit.edu	37	15	101170058	101170058	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197071597	197071597	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197071597	197071597	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPRV1	151516	broad.mit.edu	37	2	70188691	70188691	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPRV1	151516	broad.mit.edu	37	2	70188691	70188691	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119943077	119943077	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASTN2	23245	broad.mit.edu	37	9	119943077	119943077	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2	29028	broad.mit.edu	37	8	124384054	124384054	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATAD2	29028	broad.mit.edu	37	8	124384054	124384054	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25264846	25264846	+	Silent	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP12A	479	broad.mit.edu	37	13	25264846	25264846	+	Silent	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1A	523	broad.mit.edu	37	3	113503392	113503392	+	Intron	SNP	G	T	T	rs150142182	by1000genomes	TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP6V1A	523	broad.mit.edu	37	3	113503392	113503392	+	Intron	SNP	G	T	T	rs150142182	by1000genomes	TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7	6314	broad.mit.edu	37	3	63973678	63973678	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATXN7	6314	broad.mit.edu	37	3	63973678	63973678	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT4	8702	broad.mit.edu	37	3	118948626	118948626	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT4	8702	broad.mit.edu	37	3	118948626	118948626	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90642501	90642501	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BACH2	60468	broad.mit.edu	37	6	90642501	90642501	+	Nonsense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBOX1	8424	broad.mit.edu	37	11	27148755	27148755	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BBOX1	8424	broad.mit.edu	37	11	27148755	27148755	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136599576	136599576	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136599576	136599576	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDKRB1	623	broad.mit.edu	37	14	96730467	96730467	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BDKRB1	623	broad.mit.edu	37	14	96730467	96730467	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32772983	32772983	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIRC6	57448	broad.mit.edu	37	2	32772983	32772983	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP4	652	broad.mit.edu	37	14	54416867	54416867	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP4	652	broad.mit.edu	37	14	54416867	54416867	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK2	9024	broad.mit.edu	37	11	1466589	1466589	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK2	9024	broad.mit.edu	37	11	1466589	1466589	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSN	8927	broad.mit.edu	37	3	49701679	49701679	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BSN	8927	broad.mit.edu	37	3	49701679	49701679	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf72	196740	broad.mit.edu	37	10	50285321	50285321	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf72	196740	broad.mit.edu	37	10	50285321	50285321	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf33	84935	broad.mit.edu	37	13	31498601	31498601	+	3'UTR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf33	84935	broad.mit.edu	37	13	31498601	31498601	+	3'UTR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf143	90141	broad.mit.edu	37	14	90416529	90416529	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf159	80017	broad.mit.edu	37	14	91655537	91655537	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C14orf159	80017	broad.mit.edu	37	14	91655537	91655537	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24924390	24924390	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24924390	24924390	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36983241	36983241	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf41	84529	broad.mit.edu	37	15	36983241	36983241	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf62	29086	broad.mit.edu	37	19	17385023	17385023	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf62	29086	broad.mit.edu	37	19	17385023	17385023	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf94	128710	broad.mit.edu	37	20	10582562	10582562	+	Intron	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf94	128710	broad.mit.edu	37	20	10582562	10582562	+	Intron	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf15	54094	broad.mit.edu	37	21	15222221	15222221	+	5'Flank	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf63	59271	broad.mit.edu	37	21	33839916	33839916	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C21orf63	59271	broad.mit.edu	37	21	33839916	33839916	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf39	92749	broad.mit.edu	37	2	26677473	26677473	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C2orf39	92749	broad.mit.edu	37	2	26677473	26677473	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf20	84077	broad.mit.edu	37	3	14744780	14744780	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C3orf20	84077	broad.mit.edu	37	3	14744780	14744780	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf43	55319	broad.mit.edu	37	4	164435361	164435361	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C4orf43	55319	broad.mit.edu	37	4	164435361	164435361	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf170	221322	broad.mit.edu	37	6	121526351	121526351	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf170	221322	broad.mit.edu	37	6	121526351	121526351	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40947905	40947905	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7	730	broad.mit.edu	37	5	40947905	40947905	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf41	80185	broad.mit.edu	37	8	33371026	33371026	+	5'Flank	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C8orf41	80185	broad.mit.edu	37	8	33371026	33371026	+	5'Flank	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf85	138241	broad.mit.edu	37	9	74587869	74587869	+	3'UTR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf85	138241	broad.mit.edu	37	9	74587869	74587869	+	3'UTR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP5	56344	broad.mit.edu	37	19	48547203	48547203	+	5'UTR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CABP5	56344	broad.mit.edu	37	19	48547203	48547203	+	5'UTR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181745146	181745146	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201046043	201046043	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201046043	201046043	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG7	59284	broad.mit.edu	37	19	54417828	54417828	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNG7	59284	broad.mit.edu	37	19	54417828	54417828	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CADM3	57863	broad.mit.edu	37	1	159161612	159161612	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPRIN2	65981	broad.mit.edu	37	12	30888023	30888023	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAPRIN2	65981	broad.mit.edu	37	12	30888023	30888023	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ1	844	broad.mit.edu	37	1	160163610	160163610	+	Silent	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CASQ1	844	broad.mit.edu	37	1	160163610	160163610	+	Silent	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC46	201134	broad.mit.edu	37	17	64092444	64092444	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC46	201134	broad.mit.edu	37	17	64092444	64092444	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111311505	111311505	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111311505	111311505	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC85A	114800	broad.mit.edu	37	2	56611409	56611409	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC85A	114800	broad.mit.edu	37	2	56611409	56611409	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC88A	55704	broad.mit.edu	37	2	55536362	55536362	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD19	930	broad.mit.edu	37	16	28943816	28943816	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD19	930	broad.mit.edu	37	16	28943816	28943816	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300C	10871	broad.mit.edu	37	17	72540834	72540834	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300C	10871	broad.mit.edu	37	17	72540836	72540836	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300C	10871	broad.mit.edu	37	17	72540834	72540834	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD300C	10871	broad.mit.edu	37	17	72540836	72540836	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD36	948	broad.mit.edu	37	7	80108022	80108022	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC123	8872	broad.mit.edu	37	10	12252328	12252328	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC123	8872	broad.mit.edu	37	10	12252328	12252328	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK11B	984	broad.mit.edu	37	1	1600092	1600093	+	Intron	DEL	TG	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR1	9620	broad.mit.edu	37	22	46829346	46829346	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CELSR1	9620	broad.mit.edu	37	22	46829346	46829346	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEL	1056	broad.mit.edu	37	9	135947049	135947049	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEL	1056	broad.mit.edu	37	9	135947049	135947049	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFI	3426	broad.mit.edu	37	4	110673626	110673626	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CFI	3426	broad.mit.edu	37	4	110673626	110673626	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40045961	40045961	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40045961	40045961	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61735118	61735118	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD7	55636	broad.mit.edu	37	8	61735118	61735118	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHM	1121	broad.mit.edu	37	X	85128007	85128007	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHM	1121	broad.mit.edu	37	X	85128007	85128007	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC2D	29121	broad.mit.edu	37	12	9840645	9840645	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLEC2D	29121	broad.mit.edu	37	12	9840645	9840645	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPTM1	1209	broad.mit.edu	37	19	45477703	45477703	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLPTM1	1209	broad.mit.edu	37	19	45477703	45477703	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140178315	140178315	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLSTN2	64084	broad.mit.edu	37	3	140178315	140178315	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNIH3	149111	broad.mit.edu	37	1	224922425	224922425	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNIH3	149111	broad.mit.edu	37	1	224922425	224922425	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21534749	21534749	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNKSR2	22866	broad.mit.edu	37	X	21534749	21534749	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNN2	1265	broad.mit.edu	37	19	1036328	1036328	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNN2	1265	broad.mit.edu	37	19	1036328	1036328	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBLL1	22837	broad.mit.edu	37	2	165548648	165548648	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COBLL1	22837	broad.mit.edu	37	2	165548648	165548648	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75812360	75812360	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL12A1	1303	broad.mit.edu	37	6	75812360	75812360	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121215955	121215955	+	Silent	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL14A1	7373	broad.mit.edu	37	8	121215955	121215955	+	Silent	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL23A1	91522	broad.mit.edu	37	5	177669302	177669302	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL23A1	91522	broad.mit.edu	37	5	177669302	177669302	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110866264	110866264	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL4A1	1282	broad.mit.edu	37	13	110866264	110866264	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189931039	189931039	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189931039	189931039	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70963245	70963245	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70965022	70965022	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70963245	70963245	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL9A1	1297	broad.mit.edu	37	6	70965022	70965022	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPS7A	50813	broad.mit.edu	37	12	6833886	6833886	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COPS7A	50813	broad.mit.edu	37	12	6833886	6833886	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPLX1	10815	broad.mit.edu	37	4	818275	818275	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPLX1	10815	broad.mit.edu	37	4	818275	818275	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211454912	211454912	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211507348	211507348	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211454912	211454912	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPS1	1373	broad.mit.edu	37	2	211507348	211507348	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125521758	125521758	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125521758	125521758	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197390959	197390959	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB1	23418	broad.mit.edu	37	1	197390959	197390959	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP1	167	broad.mit.edu	37	6	49806162	49806162	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISP1	167	broad.mit.edu	37	6	49806162	49806162	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	87021086	87021086	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CROT	54677	broad.mit.edu	37	7	87021086	87021086	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2944743	2944743	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4645247	4645247	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2944743	2944743	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	4645247	4645247	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113599348	113599348	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113599348	113599348	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSW	1521	broad.mit.edu	37	11	65649363	65649363	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTSW	1521	broad.mit.edu	37	11	65649363	65649363	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16870805	16870805	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16870805	16870805	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49030646	49030646	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CWH43	80157	broad.mit.edu	37	4	49030646	49030646	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXADRP2	646243	broad.mit.edu	37	15	22016349	22016349	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CXADRP2	646243	broad.mit.edu	37	15	22016349	22016349	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143959113	143959113	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYP11B1	1584	broad.mit.edu	37	8	143959113	143959113	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2IP	153090	broad.mit.edu	37	9	124543753	124543753	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAB2IP	153090	broad.mit.edu	37	9	124543753	124543753	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPP1	27071	broad.mit.edu	37	4	100756761	100756761	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPP1	27071	broad.mit.edu	37	4	100756761	100756761	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF13	25879	broad.mit.edu	37	8	104433228	104433228	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCAF13	25879	broad.mit.edu	37	8	104433228	104433228	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCST1	149095	broad.mit.edu	37	1	155011919	155011920	+	Missense_Mutation	DNP	CT	AG	AG			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCST1	149095	broad.mit.edu	37	1	155011919	155011920	+	Missense_Mutation	DNP	CT	AG	AG			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110653443	110653443	+	Missense_Mutation	SNP	C	T	T	rs104894779		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110653443	110653443	+	Missense_Mutation	SNP	C	T	T	rs104894779		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI1	414301	broad.mit.edu	37	11	103908544	103908544	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDI1	414301	broad.mit.edu	37	11	103908544	103908544	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX43	55510	broad.mit.edu	37	6	74117809	74117809	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DDX43	55510	broad.mit.edu	37	6	74117809	74117809	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFA4	1669	broad.mit.edu	37	8	6793627	6793627	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DEFA4	1669	broad.mit.edu	37	8	6793627	6793627	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126143842	126143842	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND1A	57706	broad.mit.edu	37	9	126143842	126143842	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5A	23258	broad.mit.edu	37	11	9228271	9228271	+	Silent	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND5A	23258	broad.mit.edu	37	11	9228271	9228271	+	Silent	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14217692	14217692	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKB	1607	broad.mit.edu	37	7	14217692	14217692	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHODH	1723	broad.mit.edu	37	16	72040242	72040242	+	5'Flank	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHODH	1723	broad.mit.edu	37	16	72040242	72040242	+	5'Flank	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39088997	39088997	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX57	90957	broad.mit.edu	37	2	39088997	39088997	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	433614	433614	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	435817	435817	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	433614	433614	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DIP2C	22982	broad.mit.edu	37	10	435817	435817	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83183791	83183791	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLG2	1740	broad.mit.edu	37	11	83183791	83183791	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLL1	28514	broad.mit.edu	37	6	170597852	170597852	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DLL1	28514	broad.mit.edu	37	6	170597852	170597852	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21742341	21742341	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21858037	21858037	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21742341	21742341	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH11	8701	broad.mit.edu	37	7	21858037	21858037	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196786793	196786793	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH7	56171	broad.mit.edu	37	2	196786793	196786793	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11604289	11604289	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11806036	11806036	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11604289	11604289	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11806036	11806036	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI1	27019	broad.mit.edu	37	9	34490299	34490299	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAI1	27019	broad.mit.edu	37	9	34490299	34490299	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNALI1	7802	broad.mit.edu	37	1	38030777	38030777	+	3'UTR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTT	1791	broad.mit.edu	37	10	98082547	98082547	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNTT	1791	broad.mit.edu	37	10	98082547	98082547	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225750605	225750605	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225750605	225750605	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	63128798	63128798	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK7	85440	broad.mit.edu	37	1	63128798	63128798	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA4	55211	broad.mit.edu	37	3	109050950	109050950	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA4	55211	broad.mit.edu	37	3	109050950	109050950	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA5	340168	broad.mit.edu	37	6	74063550	74063550	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPPA5	340168	broad.mit.edu	37	6	74063550	74063550	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPRX	503834	broad.mit.edu	37	19	54135178	54135178	+	5'Flank	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPRX	503834	broad.mit.edu	37	19	54135178	54135178	+	5'Flank	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCR6	53820	broad.mit.edu	37	21	38385961	38385961	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCR6	53820	broad.mit.edu	37	21	38385961	38385961	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95499011	95499011	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYNC1I1	1780	broad.mit.edu	37	7	95499011	95499011	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71839992	71839992	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71839992	71839992	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F7	144455	broad.mit.edu	37	12	77419607	77419607	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F7	144455	broad.mit.edu	37	12	77427701	77427701	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F7	144455	broad.mit.edu	37	12	77419607	77419607	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
E2F7	144455	broad.mit.edu	37	12	77427701	77427701	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFR3A	23167	broad.mit.edu	37	8	133014943	133014943	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EFR3A	23167	broad.mit.edu	37	8	133014943	133014943	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGLN1	54583	broad.mit.edu	37	1	231509813	231509813	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGLN1	54583	broad.mit.edu	37	1	231509813	231509813	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGLN3	112399	broad.mit.edu	37	14	34400481	34400481	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGLN3	112399	broad.mit.edu	37	14	34400481	34400481	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3H	8667	broad.mit.edu	37	8	117671091	117671091	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EIF3H	8667	broad.mit.edu	37	8	117671091	117671091	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89462267	89462267	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA3	2042	broad.mit.edu	37	3	89462267	89462267	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	94066623	94066623	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA7	2045	broad.mit.edu	37	6	94066623	94066623	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS15L1	58513	broad.mit.edu	37	19	16513280	16513280	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS15L1	58513	broad.mit.edu	37	19	16513280	16513280	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPSTI1	94240	broad.mit.edu	37	13	43528100	43528100	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPSTI1	94240	broad.mit.edu	37	13	43528100	43528100	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212252601	212252601	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERBB4	2066	broad.mit.edu	37	2	212252601	212252601	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC5	2073	broad.mit.edu	37	13	103510579	103510579	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERCC5	2073	broad.mit.edu	37	13	103510579	103510579	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVX1	2128	broad.mit.edu	37	7	27284569	27284569	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EVX1	2128	broad.mit.edu	37	7	27284569	27284569	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAHD2B	151313	broad.mit.edu	37	2	97750067	97750067	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAHD2B	151313	broad.mit.edu	37	2	97750067	97750067	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAH	2184	broad.mit.edu	37	15	80454732	80454732	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAH	2184	broad.mit.edu	37	15	80454732	80454732	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139189617	139189617	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM135B	51059	broad.mit.edu	37	8	139189617	139189617	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM184A	79632	broad.mit.edu	37	6	119301415	119301415	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM184A	79632	broad.mit.edu	37	6	119301415	119301415	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM23A	653567	broad.mit.edu	37	10	17813427	17813427	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM23A	653567	broad.mit.edu	37	10	17813427	17813427	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55B	120406	broad.mit.edu	37	11	114568806	114568806	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55B	120406	broad.mit.edu	37	11	114568806	114568806	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71B	153745	broad.mit.edu	37	5	156590418	156590418	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71B	153745	broad.mit.edu	37	5	156590418	156590418	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71D	161142	broad.mit.edu	37	14	67675140	67675140	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71D	161142	broad.mit.edu	37	14	67675140	67675140	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43628678	43628678	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM75A6	389730	broad.mit.edu	37	9	43628678	43628678	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45606513	45606513	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCM	57697	broad.mit.edu	37	14	45606513	45606513	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126372825	126372825	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAT4	79633	broad.mit.edu	37	4	126372825	126372825	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48703402	48703402	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48800778	48800778	+	Splice_Site	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48703402	48703402	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN1	2200	broad.mit.edu	37	15	48800778	48800778	+	Splice_Site	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO15	201456	broad.mit.edu	37	18	71797821	71797821	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO15	201456	broad.mit.edu	37	18	71797821	71797821	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO42	54455	broad.mit.edu	37	1	16632427	16632427	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXO42	54455	broad.mit.edu	37	1	16632427	16632427	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN2	2220	broad.mit.edu	37	9	137777775	137777775	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN2	2220	broad.mit.edu	37	9	137777775	137777775	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL2	79368	broad.mit.edu	37	1	157737280	157737280	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL2	79368	broad.mit.edu	37	1	157737280	157737280	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157556159	157556159	+	Missense_Mutation	SNP	C	T	T	rs142198646		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCRL4	83417	broad.mit.edu	37	1	157556159	157556159	+	Missense_Mutation	SNP	C	T	T	rs142198646		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER1L6	654463	broad.mit.edu	37	8	125034095	125034096	+	Intron	INS	-	T	T	rs138450142	by1000genomes	TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FGF23	8074	broad.mit.edu	37	12	4488427	4488427	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHDC1	85462	broad.mit.edu	37	4	153885950	153885950	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FHDC1	85462	broad.mit.edu	37	4	153885950	153885950	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28623361	28623361	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FLT3	2322	broad.mit.edu	37	13	28623361	28623361	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240421101	240421101	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO1	2326	broad.mit.edu	37	1	171252449	171252450	+	Intron	INS	-	A	A	rs149740020	by1000genomes	TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO2	2327	broad.mit.edu	37	1	171168730	171168730	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO2	2327	broad.mit.edu	37	1	171178146	171178146	+	3'UTR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO2	2327	broad.mit.edu	37	1	171168730	171168730	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMO2	2327	broad.mit.edu	37	1	171178146	171178146	+	3'UTR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FN3KRP	79672	broad.mit.edu	37	17	80674840	80674840	+	Intron	DEL	G	-	-	rs76609961		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114329913	114329913	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FOXP2	93986	broad.mit.edu	37	7	114329913	114329913	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FPR2	2358	broad.mit.edu	37	19	52272883	52272883	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FPR2	2358	broad.mit.edu	37	19	52272883	52272883	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT2	2590	broad.mit.edu	37	1	230385082	230385082	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GALNT2	2590	broad.mit.edu	37	1	230385082	230385082	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9829013	9829013	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS7	8522	broad.mit.edu	37	17	9829013	9829013	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHRH	2691	broad.mit.edu	37	20	35885152	35885152	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GHRH	2691	broad.mit.edu	37	20	35885152	35885152	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA9	81025	broad.mit.edu	37	1	39340442	39340455	+	Frame_Shift_Del	DEL	GAGGTTACCTTTAG	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GJA9	81025	broad.mit.edu	37	1	39340442	39340455	+	Frame_Shift_Del	DEL	GAGGTTACCTTTAG	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134241511	134241511	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLB1L2	89944	broad.mit.edu	37	11	134241511	134241511	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLG1	2734	broad.mit.edu	37	16	74525010	74525010	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLG1	2734	broad.mit.edu	37	16	74525010	74525010	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMDS	2762	broad.mit.edu	37	6	1961104	1961104	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GMDS	2762	broad.mit.edu	37	6	1961104	1961104	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLM1	51280	broad.mit.edu	37	9	88667597	88667597	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLM1	51280	broad.mit.edu	37	9	88667597	88667597	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPNMB	10457	broad.mit.edu	37	7	23296665	23296665	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPNMB	10457	broad.mit.edu	37	7	23296665	23296665	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135441383	135441383	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR112	139378	broad.mit.edu	37	X	135441383	135441383	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR161	23432	broad.mit.edu	37	1	168055036	168055036	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR161	23432	broad.mit.edu	37	1	168055036	168055036	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRASP2	114928	broad.mit.edu	37	X	101969993	101969993	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRASP2	114928	broad.mit.edu	37	X	101969993	101969993	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM6	2916	broad.mit.edu	37	5	178413537	178413537	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM6	2916	broad.mit.edu	37	5	178413537	178413537	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTSE1	51512	broad.mit.edu	37	22	46712201	46712201	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTSE1	51512	broad.mit.edu	37	22	46712201	46712201	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCK	3055	broad.mit.edu	37	20	30667608	30667608	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCK	3055	broad.mit.edu	37	20	30667608	30667608	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCRTR2	3062	broad.mit.edu	37	6	55142300	55142300	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HCRTR2	3062	broad.mit.edu	37	6	55142300	55142300	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD1	25831	broad.mit.edu	37	14	31637595	31637595	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD1	25831	broad.mit.edu	37	14	31637636	31637636	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD1	25831	broad.mit.edu	37	14	31637595	31637595	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HECTD1	25831	broad.mit.edu	37	14	31637636	31637636	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEMGN	55363	broad.mit.edu	37	9	100693001	100693001	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEMGN	55363	broad.mit.edu	37	9	100693001	100693001	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFE	3077	broad.mit.edu	37	6	26087558	26087558	+	5'UTR	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HFE	3077	broad.mit.edu	37	6	26087558	26087558	+	5'UTR	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H4K	8362	broad.mit.edu	37	6	27799270	27799270	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIST1H4K	8362	broad.mit.edu	37	6	27799270	27799270	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK2	3099	broad.mit.edu	37	2	75099464	75099464	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK2	3099	broad.mit.edu	37	2	75099464	75099464	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK3	3101	broad.mit.edu	37	5	176314670	176314670	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HK3	3101	broad.mit.edu	37	5	176314670	176314670	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA5	3202	broad.mit.edu	37	7	27182779	27182779	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA5	3202	broad.mit.edu	37	7	27182779	27182779	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB9	3219	broad.mit.edu	37	17	46703471	46703471	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST4	9951	broad.mit.edu	37	16	26147509	26147509	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS3ST4	9951	broad.mit.edu	37	16	26147509	26147509	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS6ST3	266722	broad.mit.edu	37	13	97485263	97485263	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HS6ST3	266722	broad.mit.edu	37	13	97485263	97485263	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22217022	22217022	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22217022	22217022	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR4	3360	broad.mit.edu	37	5	147900613	147900613	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HTR4	3360	broad.mit.edu	37	5	147900613	147900613	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IBTK	25998	broad.mit.edu	37	6	82950159	82950159	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IBTK	25998	broad.mit.edu	37	6	82950159	82950159	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFLTD1	160492	broad.mit.edu	37	12	25671726	25671726	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFLTD1	160492	broad.mit.edu	37	12	25671726	25671726	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT80	57560	broad.mit.edu	37	3	159976499	159976499	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT80	57560	broad.mit.edu	37	3	159976499	159976499	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT88	8100	broad.mit.edu	37	13	21205030	21205030	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47121254	47121254	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2BP1	10642	broad.mit.edu	37	17	47121254	47121254	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGF2R	3482	broad.mit.edu	37	6	160464271	160464271	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27460086	27460086	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL21R	50615	broad.mit.edu	37	16	27460086	27460086	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL26	55801	broad.mit.edu	37	12	68595652	68595652	+	Silent	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL26	55801	broad.mit.edu	37	12	68595652	68595652	+	Silent	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35875776	35875776	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL7R	3575	broad.mit.edu	37	5	35875776	35875776	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5F	22876	broad.mit.edu	37	10	121579120	121579120	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15212194	15212194	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSC	387755	broad.mit.edu	37	11	15212194	15212194	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO9	55705	broad.mit.edu	37	1	201839917	201839917	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPO9	55705	broad.mit.edu	37	1	201839917	201839917	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQUB	154865	broad.mit.edu	37	7	123143273	123143273	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQUB	154865	broad.mit.edu	37	7	123143273	123143273	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF8	3394	broad.mit.edu	37	16	85951881	85951881	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IRF8	3394	broad.mit.edu	37	16	85951881	85951881	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA5	3678	broad.mit.edu	37	12	54803130	54803130	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA5	3678	broad.mit.edu	37	12	54803130	54803130	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPKC	80271	broad.mit.edu	37	19	41231331	41231331	+	Silent	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPKC	80271	broad.mit.edu	37	19	41231331	41231331	+	Silent	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26572005	26572005	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26775077	26775077	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26572005	26572005	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITPR2	3709	broad.mit.edu	37	12	26775077	26775077	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP3	30818	broad.mit.edu	37	2	96047273	96047273	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNIP3	30818	broad.mit.edu	37	2	96047273	96047273	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ2	3759	broad.mit.edu	37	17	68171820	68171820	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNJ2	3759	broad.mit.edu	37	17	68171820	68171820	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78674617	78674617	+	Intron	SNP	T	C	C	rs113613300		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78844415	78844415	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78674617	78674617	+	Intron	SNP	T	C	C	rs113613300		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNMA1	3778	broad.mit.edu	37	10	78844415	78844415	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN2	3781	broad.mit.edu	37	5	113740630	113740630	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNN2	3781	broad.mit.edu	37	5	113740630	113740630	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2A	22992	broad.mit.edu	37	11	67013473	67013473	+	Silent	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2A	22992	broad.mit.edu	37	11	67013473	67013473	+	Silent	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2B	84678	broad.mit.edu	37	12	122013805	122013805	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM2B	84678	broad.mit.edu	37	12	122013805	122013805	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3B	51780	broad.mit.edu	37	5	137759901	137759901	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDM3B	51780	broad.mit.edu	37	5	137759901	137759901	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0317	9870	broad.mit.edu	37	14	75143362	75143362	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0317	9870	broad.mit.edu	37	14	75143362	75143362	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27783033	27783033	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0556	23247	broad.mit.edu	37	16	27783033	27783033	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0913	23053	broad.mit.edu	37	10	75552466	75552466	+	Silent	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0913	23053	broad.mit.edu	37	10	75552466	75552466	+	Silent	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1211	57482	broad.mit.edu	37	4	57189425	57189425	+	Intron	SNP	G	T	T	rs148570607	by1000genomes	TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113761558	113761558	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1407	57577	broad.mit.edu	37	3	113761558	113761558	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1468	57614	broad.mit.edu	37	18	59895930	59895930	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70681367	70681367	+	Silent	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70681367	70681367	+	Silent	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL2	11275	broad.mit.edu	37	4	166160191	166160191	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL2	11275	broad.mit.edu	37	4	166160191	166160191	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK3	354	broad.mit.edu	37	19	51361615	51361615	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLK3	354	broad.mit.edu	37	19	51361615	51361615	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KMO	8564	broad.mit.edu	37	1	241723855	241723855	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	A	A	rs121913530		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398285	25398285	+	Missense_Mutation	SNP	C	A	A	rs121913530		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT7	3855	broad.mit.edu	37	12	52642150	52642150	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR1	3903	broad.mit.edu	37	19	54867921	54867921	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR1	3903	broad.mit.edu	37	19	54867921	54867921	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129581984	129581984	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA2	3908	broad.mit.edu	37	6	129581984	129581984	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21531760	21531760	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMA3	3909	broad.mit.edu	37	18	21531760	21531760	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107615775	107615775	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMB1	3912	broad.mit.edu	37	7	107615775	107615775	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133942411	133942411	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAMC3	10319	broad.mit.edu	37	9	133942411	133942411	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARS	51520	broad.mit.edu	37	5	145493569	145493569	+	3'UTR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LARS	51520	broad.mit.edu	37	5	145493569	145493569	+	3'UTR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHB	3945	broad.mit.edu	37	12	21807503	21807503	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDHB	3945	broad.mit.edu	37	12	21807503	21807503	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEO1	123169	broad.mit.edu	37	15	52246769	52246769	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEO1	123169	broad.mit.edu	37	15	52246769	52246769	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG1	3978	broad.mit.edu	37	19	48631011	48631011	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LIG1	3978	broad.mit.edu	37	19	48631011	48631011	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB3	11025	broad.mit.edu	37	19	54722346	54722346	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB3	11025	broad.mit.edu	37	19	54722346	54722346	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LMX1B	4010	broad.mit.edu	37	9	129458382	129458382	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC643387	643387	broad.mit.edu	37	2	239141692	239141692	+	3'UTR	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC643387	643387	broad.mit.edu	37	2	239141692	239141692	+	3'UTR	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22298287	22298287	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22298287	22298287	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728024	728024	broad.mit.edu	37	8	37605030	37605030	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728024	728024	broad.mit.edu	37	8	37605030	37605030	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728989	728989	broad.mit.edu	37	1	146493254	146493254	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC728989	728989	broad.mit.edu	37	1	146493254	146493254	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC729156	729156	broad.mit.edu	37	7	66298038	66298038	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC729156	729156	broad.mit.edu	37	7	66298038	66298038	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP12	29967	broad.mit.edu	37	8	105511462	105511462	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP12	29967	broad.mit.edu	37	8	105511462	105511462	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141747245	141747245	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141747245	141747245	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37A3	374819	broad.mit.edu	37	17	62850793	62850793	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC37A3	374819	broad.mit.edu	37	17	62850793	62850793	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77745899	77745899	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRTM4	80059	broad.mit.edu	37	2	77745899	77745899	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP2	4053	broad.mit.edu	37	14	74976011	74976011	+	Silent	SNP	C	A	A	rs61729544	byFrequency	TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LTBP2	4053	broad.mit.edu	37	14	74976011	74976011	+	Silent	SNP	C	A	A	rs61729544	byFrequency	TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPLA1	10434	broad.mit.edu	37	8	54965335	54965335	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYPLA1	10434	broad.mit.edu	37	8	54965335	54965335	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210518007	210518007	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210518007	210518007	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK2	2011	broad.mit.edu	37	11	63666048	63666048	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK2	2011	broad.mit.edu	37	11	63666048	63666048	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK4	57787	broad.mit.edu	37	19	45769531	45769531	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARK4	57787	broad.mit.edu	37	19	45769531	45769531	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARS	4141	broad.mit.edu	37	12	57905977	57905977	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MARS	4141	broad.mit.edu	37	12	57905977	57905977	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAS1L	116511	broad.mit.edu	37	6	29457359	29457359	+	5'Flank	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAS1L	116511	broad.mit.edu	37	6	29457359	29457359	+	5'Flank	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN4	8785	broad.mit.edu	37	20	43929509	43929509	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN4	8785	broad.mit.edu	37	20	43929509	43929509	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED23	9439	broad.mit.edu	37	6	131914030	131914030	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MED23	9439	broad.mit.edu	37	6	131914030	131914030	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3304362	3304362	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEFV	4210	broad.mit.edu	37	16	3304362	3304362	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPCE	56257	broad.mit.edu	37	7	100030795	100030795	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEPCE	56257	broad.mit.edu	37	7	100030795	100030795	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MERTK	10461	broad.mit.edu	37	2	112786012	112786012	+	Silent	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MERTK	10461	broad.mit.edu	37	2	112786012	112786012	+	Silent	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5	4249	broad.mit.edu	37	2	135076256	135076256	+	Silent	SNP	C	T	T	rs149877815		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGAT5	4249	broad.mit.edu	37	2	135076256	135076256	+	Silent	SNP	C	T	T	rs149877815		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR517C	574492	broad.mit.edu	37	19	54242768	54242768	+	5'Flank	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLEC	9761	broad.mit.edu	37	12	121125332	121125332	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLEC	9761	broad.mit.edu	37	12	121125332	121125332	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP20	9313	broad.mit.edu	37	11	102482490	102482490	+	Silent	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP20	9313	broad.mit.edu	37	11	102482490	102482490	+	Silent	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44641309	44641310	+	Intron	DNP	GG	TT	TT			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44641309	44641310	+	Intron	DNP	GG	TT	TT			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOCS3	27304	broad.mit.edu	37	20	49575314	49575314	+	5'Flank	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MOCS3	27304	broad.mit.edu	37	20	49575314	49575314	+	5'Flank	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS23	51649	broad.mit.edu	37	17	55917173	55917173	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS23	51649	broad.mit.edu	37	17	55917173	55917173	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTERFD2	130916	broad.mit.edu	37	2	242039105	242039105	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTERFD2	130916	broad.mit.edu	37	2	242039105	242039105	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8993385	8993385	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8997330	8997330	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8993385	8993385	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	8997330	8997330	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUM1L1	139221	broad.mit.edu	37	X	105449935	105449935	+	Silent	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUM1L1	139221	broad.mit.edu	37	X	105449935	105449935	+	Silent	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUSK	4593	broad.mit.edu	37	9	113547438	113547438	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77718792	77718792	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYCBP2	23077	broad.mit.edu	37	13	77718792	77718792	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10318357	10318357	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH8	4626	broad.mit.edu	37	17	10318357	10318357	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1G	64005	broad.mit.edu	37	7	45011773	45011773	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO1G	64005	broad.mit.edu	37	7	45011773	45011773	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171358188	171358188	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO3B	140469	broad.mit.edu	37	2	171358188	171358188	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69948775	69948775	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYPN	84665	broad.mit.edu	37	10	69948775	69948775	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAF1	92345	broad.mit.edu	37	4	164087832	164087832	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAF1	92345	broad.mit.edu	37	4	164087832	164087832	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144617312	144617312	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBPF9	400818	broad.mit.edu	37	1	144617312	144617312	+	Intron	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPH	23397	broad.mit.edu	37	2	97009753	97009753	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCAPH	23397	broad.mit.edu	37	2	97009753	97009753	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124812058	124812059	+	Missense_Mutation	DNP	GA	AG	AG			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR2	9612	broad.mit.edu	37	12	124812058	124812059	+	Missense_Mutation	DNP	GA	AG	AG			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119176668	119176668	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDST3	9348	broad.mit.edu	37	4	119176668	119176668	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFC1	4717	broad.mit.edu	37	4	140213785	140213785	+	Intron	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDUFC1	4717	broad.mit.edu	37	4	140213785	140213785	+	Intron	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB1	64168	broad.mit.edu	37	8	91940579	91940580	+	Intron	DNP	CC	AA	AA			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NECAB1	64168	broad.mit.edu	37	8	91940579	91940580	+	Intron	DNP	CC	AA	AA			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK3	4752	broad.mit.edu	37	13	52728041	52728041	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEK3	4752	broad.mit.edu	37	13	52728041	52728041	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NES	10763	broad.mit.edu	37	1	156643273	156643273	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NES	10763	broad.mit.edu	37	1	156643273	156643273	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29546053	29546053	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NF1	4763	broad.mit.edu	37	17	29546053	29546053	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61554015	61554015	+	Silent	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIA	4774	broad.mit.edu	37	1	61554015	61554015	+	Silent	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGEF	25791	broad.mit.edu	37	2	233745922	233745922	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NGEF	25791	broad.mit.edu	37	2	233745922	233745922	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKG7	4818	broad.mit.edu	37	19	51874940	51874940	+	3'UTR	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKG7	4818	broad.mit.edu	37	19	51874940	51874940	+	3'UTR	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMNAT2	23057	broad.mit.edu	37	1	183247839	183247839	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NMNAT2	23057	broad.mit.edu	37	1	183247839	183247839	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117715775	117715775	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOS1	4842	broad.mit.edu	37	12	117715775	117715775	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH1	4851	broad.mit.edu	37	9	139409124	139409124	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NOTCH1	4851	broad.mit.edu	37	9	139409124	139409124	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP4	261734	broad.mit.edu	37	1	5987964	5987964	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPHP4	261734	broad.mit.edu	37	1	5987964	5987964	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR5A2	2494	broad.mit.edu	37	1	200080540	200080540	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR5A2	2494	broad.mit.edu	37	1	200080540	200080540	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79176063	79176063	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRXN3	9369	broad.mit.edu	37	14	79176063	79176063	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTN1	9423	broad.mit.edu	37	17	9086271	9086271	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTN1	9423	broad.mit.edu	37	17	9086271	9086271	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88420120	88420120	+	3'UTR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88679111	88679111	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88420120	88420120	+	3'UTR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88679111	88679111	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102334543	102334543	+	Silent	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NXF3	56000	broad.mit.edu	37	X	102334543	102334543	+	Silent	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228402005	228402005	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228433270	228433270	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228402005	228402005	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OBSCN	84033	broad.mit.edu	37	1	228433270	228433270	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCIAD2	132299	broad.mit.edu	37	4	48887594	48887594	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OCIAD2	132299	broad.mit.edu	37	4	48887594	48887594	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRL1	4987	broad.mit.edu	37	20	62730176	62730176	+	3'UTR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPRL1	4987	broad.mit.edu	37	20	62730176	62730176	+	3'UTR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPTN	10133	broad.mit.edu	37	10	13160733	13160733	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OPTN	10133	broad.mit.edu	37	10	13160733	13160733	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G8	219869	broad.mit.edu	37	11	123900870	123900870	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10G8	219869	broad.mit.edu	37	11	123900870	123900870	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1A2	26189	broad.mit.edu	37	17	3101509	3101509	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1A2	26189	broad.mit.edu	37	17	3101509	3101509	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1S2	219958	broad.mit.edu	37	11	57971562	57971562	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR1S2	219958	broad.mit.edu	37	11	57971562	57971562	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248263647	248263647	+	3'UTR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248263647	248263647	+	3'UTR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5A2	219981	broad.mit.edu	37	11	59190311	59190311	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5A2	219981	broad.mit.edu	37	11	59190311	59190311	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5I1	10798	broad.mit.edu	37	11	55703175	55703175	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5I1	10798	broad.mit.edu	37	11	55703175	55703175	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579752	55579752	+	Silent	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L1	219437	broad.mit.edu	37	11	55579752	55579752	+	Silent	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L2	26338	broad.mit.edu	37	11	55595317	55595317	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L2	26338	broad.mit.edu	37	11	55595317	55595317	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7E37P	26636	broad.mit.edu	37	13	42016957	42016957	+	5'Flank	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7E37P	26636	broad.mit.edu	37	13	42016957	42016957	+	5'Flank	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7G2	390882	broad.mit.edu	37	19	9214004	9214004	+	5'Flank	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR7G2	390882	broad.mit.edu	37	19	9214004	9214004	+	5'Flank	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8I2	120586	broad.mit.edu	37	11	55860877	55860877	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8I2	120586	broad.mit.edu	37	11	55861048	55861049	+	Missense_Mutation	DNP	CG	TT	TT	rs138846423		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8I2	120586	broad.mit.edu	37	11	55860877	55860877	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8I2	120586	broad.mit.edu	37	11	55861048	55861049	+	Missense_Mutation	DNP	CG	TT	TT	rs138846423		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J3	81168	broad.mit.edu	37	11	55904455	55904455	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8J3	81168	broad.mit.edu	37	11	55904455	55904455	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL5	114879	broad.mit.edu	37	11	3114834	3114834	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OSBPL5	114879	broad.mit.edu	37	11	3114834	3114834	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26696258	26696258	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26696258	26696258	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149936267	149936267	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTUD7B	56957	broad.mit.edu	37	1	149936267	149936267	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN2	11252	broad.mit.edu	37	22	43272818	43272818	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN2	11252	broad.mit.edu	37	22	43272818	43272818	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN3	29763	broad.mit.edu	37	11	47204066	47204066	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACSIN3	29763	broad.mit.edu	37	11	47204066	47204066	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX7	5081	broad.mit.edu	37	1	19027127	19027127	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAX7	5081	broad.mit.edu	37	1	19027127	19027127	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55583185	55583185	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55583306	55583306	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56360540	56360540	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55583185	55583185	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	55583306	55583306	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDH15	65217	broad.mit.edu	37	10	56360540	56360540	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82544816	82544816	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82544816	82544816	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31890287	31890287	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE1C	5137	broad.mit.edu	37	7	31890287	31890287	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144854708	144854708	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144951923	144951923	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144854708	144854708	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE4DIP	9659	broad.mit.edu	37	1	144951923	144951923	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8B	8622	broad.mit.edu	37	5	76715644	76715644	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE8B	8622	broad.mit.edu	37	5	76715644	76715644	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM2	64236	broad.mit.edu	37	8	22452027	22452027	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDLIM2	64236	broad.mit.edu	37	8	22452027	22452027	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER1	5187	broad.mit.edu	37	17	8051855	8051855	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER1	5187	broad.mit.edu	37	17	8051855	8051855	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF21B	112885	broad.mit.edu	37	22	45278997	45278997	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHF21B	112885	broad.mit.edu	37	22	45278997	45278997	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS3	10401	broad.mit.edu	37	1	145581138	145581138	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS3	10401	broad.mit.edu	37	1	145581146	145581146	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS3	10401	broad.mit.edu	37	1	145581138	145581138	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIAS3	10401	broad.mit.edu	37	1	145581146	145581146	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51882471	51882471	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKHD1	5314	broad.mit.edu	37	6	51882471	51882471	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA1A	51365	broad.mit.edu	37	3	119347542	119347542	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA1A	51365	broad.mit.edu	37	3	119347542	119347542	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4C	8605	broad.mit.edu	37	19	48565122	48565122	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4C	8605	broad.mit.edu	37	19	48565122	48565122	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4E	123745	broad.mit.edu	37	15	42293323	42293323	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLA2G4E	123745	broad.mit.edu	37	15	42293323	42293323	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	144994080	144994080	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEC	5339	broad.mit.edu	37	8	144994080	144994080	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161133949	161133949	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLG	5340	broad.mit.edu	37	6	161133949	161133949	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB1	5364	broad.mit.edu	37	3	48462684	48462684	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNB1	5364	broad.mit.edu	37	3	48462684	48462684	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PMS2L4	5382	broad.mit.edu	37	7	66751360	66751360	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA1	285848	broad.mit.edu	37	6	36269736	36269736	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA1	285848	broad.mit.edu	37	6	36269736	36269736	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLD2	5425	broad.mit.edu	37	7	44154947	44154947	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLD2	5425	broad.mit.edu	37	7	44154947	44154947	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133218752	133218752	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLE	5426	broad.mit.edu	37	12	133218752	133218752	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1D	51082	broad.mit.edu	37	13	28239978	28239978	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POLR1D	51082	broad.mit.edu	37	13	28239978	28239978	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU3F2	5454	broad.mit.edu	37	6	99282742	99282742	+	5'UTR	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POU3F2	5454	broad.mit.edu	37	6	99282742	99282742	+	5'UTR	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27835625	27835625	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPFIBP1	8496	broad.mit.edu	37	12	27835625	27835625	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIL4	85313	broad.mit.edu	37	6	149833181	149833181	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIL4	85313	broad.mit.edu	37	6	149833181	149833181	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIP5K2	23262	broad.mit.edu	37	5	102494993	102494993	+	Silent	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPIP5K2	23262	broad.mit.edu	37	5	102494993	102494993	+	Silent	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG4	10216	broad.mit.edu	37	1	186276415	186276415	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG4	10216	broad.mit.edu	37	1	186279110	186279110	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG4	10216	broad.mit.edu	37	1	186276415	186276415	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRG4	10216	broad.mit.edu	37	1	186279110	186279110	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57512615	57512615	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRIM2	5558	broad.mit.edu	37	6	57512615	57512615	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24046816	24046816	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCB	5579	broad.mit.edu	37	16	24046816	24046816	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCG	5582	broad.mit.edu	37	19	54394834	54394834	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRKCG	5582	broad.mit.edu	37	19	54394834	54394834	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT8	56341	broad.mit.edu	37	12	3701463	3701463	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRMT8	56341	broad.mit.edu	37	12	3701463	3701463	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRO	5800	broad.mit.edu	37	12	15701955	15701955	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRO	5800	broad.mit.edu	37	12	15701955	15701955	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PVRL4	81607	broad.mit.edu	37	1	161043035	161043035	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PVRL4	81607	broad.mit.edu	37	1	161043035	161043035	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGGTA	5875	broad.mit.edu	37	14	24738690	24738690	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGGTA	5875	broad.mit.edu	37	14	24738690	24738690	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51L1	5890	broad.mit.edu	37	14	68878251	68878251	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAD51L1	5890	broad.mit.edu	37	14	68878251	68878251	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF6	51735	broad.mit.edu	37	5	130799844	130799844	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAPGEF6	51735	broad.mit.edu	37	5	130799844	130799844	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF8	11228	broad.mit.edu	37	12	26217418	26217418	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASSF8	11228	broad.mit.edu	37	12	26217418	26217418	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCCD1	91433	broad.mit.edu	37	15	91503341	91503341	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCCD1	91433	broad.mit.edu	37	15	91503341	91503341	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCOR3	55758	broad.mit.edu	37	1	211487073	211487073	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RCOR3	55758	broad.mit.edu	37	1	211487073	211487073	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPIN1	29803	broad.mit.edu	37	7	150069234	150069234	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REPIN1	29803	broad.mit.edu	37	7	150069234	150069234	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX1	5989	broad.mit.edu	37	19	14083892	14083892	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RFX1	5989	broad.mit.edu	37	19	14083892	14083892	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RG9MTD2	93587	broad.mit.edu	37	4	100478502	100478502	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RG9MTD2	93587	broad.mit.edu	37	4	100478502	100478502	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGPD4	285190	broad.mit.edu	37	2	108475847	108475847	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS8	85397	broad.mit.edu	37	1	182638723	182638723	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS8	85397	broad.mit.edu	37	1	182638723	182638723	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN1	9610	broad.mit.edu	37	11	66099662	66099662	+	3'UTR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIN1	9610	broad.mit.edu	37	11	66099662	66099662	+	3'UTR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEL	6041	broad.mit.edu	37	1	182550586	182550586	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNASEL	6041	broad.mit.edu	37	1	182550586	182550586	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25353824	25353824	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF17	56163	broad.mit.edu	37	13	25353824	25353824	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77651490	77651490	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ROBO2	6092	broad.mit.edu	37	3	77651490	77651490	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPIA	22934	broad.mit.edu	37	2	88991073	88991073	+	5'Flank	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPIA	22934	broad.mit.edu	37	2	88991073	88991073	+	5'Flank	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152128887	152128887	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPTN	126638	broad.mit.edu	37	1	152128887	152128887	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237777895	237777895	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237813144	237813144	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237777895	237777895	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RYR2	6262	broad.mit.edu	37	1	237813144	237813144	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR3	1903	broad.mit.edu	37	9	91616648	91616648	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
S1PR3	1903	broad.mit.edu	37	9	91616648	91616648	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD10	140700	broad.mit.edu	37	20	62607069	62607069	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD10	140700	broad.mit.edu	37	20	62607069	62607069	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD4A	23034	broad.mit.edu	37	14	55237029	55237029	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD4A	23034	broad.mit.edu	37	14	55237029	55237029	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCFD1	23256	broad.mit.edu	37	14	31169464	31169464	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCFD1	23256	broad.mit.edu	37	14	31169464	31169464	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166897828	166897828	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN1A	6323	broad.mit.edu	37	2	166897828	166897828	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	165953852	165953852	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3A	6328	broad.mit.edu	37	2	165953852	165953852	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN7A	6332	broad.mit.edu	37	2	167289284	167289284	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN7A	6332	broad.mit.edu	37	2	167289284	167289284	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC23B	10483	broad.mit.edu	37	20	18485673	18485673	+	5'Flank	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEC23B	10483	broad.mit.edu	37	20	18485673	18485673	+	5'Flank	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42531409	42531409	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SETBP1	26040	broad.mit.edu	37	18	42531409	42531409	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L2	26470	broad.mit.edu	37	16	29906600	29906600	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEZ6L2	26470	broad.mit.edu	37	16	29906600	29906600	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SH2B1	25970	broad.mit.edu	37	16	28884500	28884500	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIL1	64374	broad.mit.edu	37	5	138463544	138463544	+	5'UTR	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIL1	64374	broad.mit.edu	37	5	138463544	138463544	+	5'UTR	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232650756	232650756	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L2	57568	broad.mit.edu	37	1	232650756	232650756	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L3	23094	broad.mit.edu	37	19	38621437	38621437	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L3	23094	broad.mit.edu	37	19	38633376	38633376	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L3	23094	broad.mit.edu	37	19	38621437	38621437	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L3	23094	broad.mit.edu	37	19	38633376	38633376	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPA	140885	broad.mit.edu	37	20	1908673	1908673	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPA	140885	broad.mit.edu	37	20	1908673	1908673	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164757634	164757634	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SI	6476	broad.mit.edu	37	3	164757634	164757634	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48512830	48512830	+	Splice_Site	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC12A1	6557	broad.mit.edu	37	15	48512830	48512830	+	Splice_Site	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A1	6561	broad.mit.edu	37	7	122768927	122768927	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC13A1	6561	broad.mit.edu	37	7	122768927	122768927	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC25A19	60386	broad.mit.edu	37	17	73269841	73269842	+	Intron	INS	-	TTATT	TTATT	rs150528573	by1000genomes	TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A6	55676	broad.mit.edu	37	2	32391102	32391102	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC30A6	55676	broad.mit.edu	37	2	32391102	32391102	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A12	159963	broad.mit.edu	37	11	26743035	26743035	+	Missense_Mutation	SNP	C	A	A	rs142065702		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A12	159963	broad.mit.edu	37	11	26743035	26743035	+	Missense_Mutation	SNP	C	A	A	rs142065702		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A6	8884	broad.mit.edu	37	2	27423286	27423286	+	3'UTR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A6	8884	broad.mit.edu	37	2	27423286	27423286	+	3'UTR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10976920	10976920	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A11	6538	broad.mit.edu	37	3	10976920	10976920	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20629074	20629074	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A5	9152	broad.mit.edu	37	11	20629074	20629074	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK6	84189	broad.mit.edu	37	13	86369930	86369930	+	Silent	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK6	84189	broad.mit.edu	37	13	86369930	86369930	+	Silent	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156237303	156237303	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SMG5	23381	broad.mit.edu	37	1	156237303	156237303	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNIP1	79753	broad.mit.edu	37	1	38019714	38019714	+	Silent	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNIP1	79753	broad.mit.edu	37	1	38019714	38019714	+	Silent	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25312955	25312955	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25324188	25324188	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25312955	25312955	+	Intron	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD116-4	100033416	broad.mit.edu	37	15	25324188	25324188	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96953509	96953509	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96969089	96969089	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96953509	96953509	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP200	23020	broad.mit.edu	37	2	96969089	96969089	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX31	169166	broad.mit.edu	37	8	101629773	101629773	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX31	169166	broad.mit.edu	37	8	101629773	101629773	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA8	145946	broad.mit.edu	37	15	97327389	97327389	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPATA8	145946	broad.mit.edu	37	15	97327389	97327389	+	Silent	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE7P	441251	broad.mit.edu	37	7	72339543	72339543	+	RNA	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPDYE7P	441251	broad.mit.edu	37	7	72339543	72339543	+	RNA	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINK14	408187	broad.mit.edu	37	5	147549350	147549350	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPINK14	408187	broad.mit.edu	37	5	147549350	147549350	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158588981	158588981	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158639071	158639071	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158588981	158588981	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158639071	158639071	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQSTM1	8878	broad.mit.edu	37	5	179247951	179247951	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SQSTM1	8878	broad.mit.edu	37	5	179247951	179247951	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48218014	48218014	+	5'Flank	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX3	10214	broad.mit.edu	37	X	48218014	48218014	+	5'Flank	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAM2	10254	broad.mit.edu	37	2	153004817	153004817	+	Intron	DEL	A	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT1	6772	broad.mit.edu	37	2	191865802	191865802	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAT1	6772	broad.mit.edu	37	2	191865802	191865802	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIM1	6786	broad.mit.edu	37	11	4091486	4091486	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STIM1	6786	broad.mit.edu	37	11	4091486	4091486	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK11	6794	broad.mit.edu	37	19	1218447	1218447	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK11	6794	broad.mit.edu	37	19	1218447	1218447	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152730841	152730841	+	Missense_Mutation	SNP	C	G	G	rs140418114		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152792795	152792795	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152730841	152730841	+	Missense_Mutation	SNP	C	G	G	rs140418114		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNE1	23345	broad.mit.edu	37	6	152792795	152792795	+	Silent	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNGR4	23546	broad.mit.edu	37	19	48876782	48876782	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYNGR4	23546	broad.mit.edu	37	19	48876782	48876782	+	Silent	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT10	341359	broad.mit.edu	37	12	33529881	33529881	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT10	341359	broad.mit.edu	37	12	33529881	33529881	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT13	57586	broad.mit.edu	37	11	45277246	45277246	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT13	57586	broad.mit.edu	37	11	45277246	45277246	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT6	148281	broad.mit.edu	37	1	114682356	114682356	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT6	148281	broad.mit.edu	37	1	114682356	114682356	+	Silent	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R38	5726	broad.mit.edu	37	7	141672991	141672991	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAS2R38	5726	broad.mit.edu	37	7	141672991	141672991	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEAL5	340543	broad.mit.edu	37	X	102529026	102529026	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEAL5	340543	broad.mit.edu	37	X	102529026	102529026	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF21	6943	broad.mit.edu	37	6	134210599	134210599	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF21	6943	broad.mit.edu	37	6	134210599	134210599	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	52943027	52943027	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCF4	6925	broad.mit.edu	37	18	52943027	52943027	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT4	150483	broad.mit.edu	37	2	95541448	95541448	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEKT4	150483	broad.mit.edu	37	2	95541448	95541448	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56698990	56698991	+	Intron	DNP	TC	AA	AA			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEX14	56155	broad.mit.edu	37	17	56698990	56698991	+	Intron	DNP	TC	AA	AA			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50786534	50786534	+	5'UTR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFAP2B	7021	broad.mit.edu	37	6	50786534	50786534	+	5'UTR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFR2	7036	broad.mit.edu	37	7	100225340	100225340	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TFR2	7036	broad.mit.edu	37	7	100225340	100225340	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM6	343641	broad.mit.edu	37	20	2397970	2397970	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM6	343641	broad.mit.edu	37	20	2397970	2397970	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TH	7054	broad.mit.edu	37	11	2185528	2185528	+	Missense_Mutation	SNP	G	T	T	rs78779683	by1000genomes	TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TH	7054	broad.mit.edu	37	11	2185528	2185528	+	Missense_Mutation	SNP	G	T	T	rs78779683	by1000genomes	TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMP2	7077	broad.mit.edu	37	17	76851735	76851735	+	3'UTR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMP2	7077	broad.mit.edu	37	17	76853506	76853506	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMP2	7077	broad.mit.edu	37	17	76851735	76851735	+	3'UTR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TIMP2	7077	broad.mit.edu	37	17	76853506	76853506	+	Intron	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR2	7097	broad.mit.edu	37	4	154626374	154626374	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLR2	7097	broad.mit.edu	37	4	154626374	154626374	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11B	132724	broad.mit.edu	37	4	69095267	69095267	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11B	132724	broad.mit.edu	37	4	69095267	69095267	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT2	7139	broad.mit.edu	37	1	201337405	201337405	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNNT2	7139	broad.mit.edu	37	1	201337405	201337405	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS1	7145	broad.mit.edu	37	2	218669163	218669163	+	3'UTR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TNS1	7145	broad.mit.edu	37	2	218669163	218669163	+	3'UTR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7574017	7574017	+	Missense_Mutation	SNP	C	A	A	rs121912664		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7574017	7574017	+	Missense_Mutation	SNP	C	A	A	rs121912664		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPX2	22974	broad.mit.edu	37	20	30354472	30354472	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPX2	22974	broad.mit.edu	37	20	30354472	30354472	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1	23471	broad.mit.edu	37	8	71510526	71510526	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRAM1	23471	broad.mit.edu	37	8	71510526	71510526	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM26	7726	broad.mit.edu	37	6	30153924	30153924	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM37	4591	broad.mit.edu	37	17	57168627	57168627	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM37	4591	broad.mit.edu	37	17	57168627	57168627	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230787157	230787157	+	5'Flank	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP12	9320	broad.mit.edu	37	2	230787157	230787157	+	5'Flank	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38266263	38266263	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPC4	7223	broad.mit.edu	37	13	38266263	38266263	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234878403	234878403	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM8	79054	broad.mit.edu	37	2	234878403	234878403	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98574614	98574614	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98574614	98574614	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC13	79573	broad.mit.edu	37	1	231047118	231047118	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC13	79573	broad.mit.edu	37	1	231047118	231047118	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC24	164118	broad.mit.edu	37	1	156555750	156555750	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7B	145567	broad.mit.edu	37	14	91161817	91161817	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTC7B	145567	broad.mit.edu	37	14	91161817	91161817	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179395870	179395870	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179395870	179395870	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP6	85378	broad.mit.edu	37	22	50662598	50662598	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBGCP6	85378	broad.mit.edu	37	22	50662598	50662598	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYR	7299	broad.mit.edu	37	11	88911127	88911128	+	Missense_Mutation	DNP	CC	AA	AA	rs35541275		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TYR	7299	broad.mit.edu	37	11	88911127	88911128	+	Missense_Mutation	DNP	CC	AA	AA	rs35541275		TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3A	7337	broad.mit.edu	37	15	25615807	25615807	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3A	7337	broad.mit.edu	37	15	25615807	25615807	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118257352	118257352	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE4A	9354	broad.mit.edu	37	11	118257352	118257352	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42612262	42612262	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR2	23304	broad.mit.edu	37	6	42612262	42612262	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN11	91544	broad.mit.edu	37	1	26628188	26628188	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN11	91544	broad.mit.edu	37	1	26628188	26628188	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43504412	43504412	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UMODL1	89766	broad.mit.edu	37	21	43504412	43504412	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45A	55898	broad.mit.edu	37	15	91485905	91485905	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC45A	55898	broad.mit.edu	37	15	91485905	91485905	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP2	151531	broad.mit.edu	37	2	158971741	158971741	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UPP2	151531	broad.mit.edu	37	2	158971741	158971741	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	45727561	45727561	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	6041733	6041733	+	IGR	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	27910818	27910818	+	IGR	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48928738	48928738	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89806220	89806220	+	IGR	DEL	G	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	108675054	108675054	+	IGR	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	113453932	113453932	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	111415036	111415036	+	IGR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	20753489	20753489	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	28270660	28270660	+	IGR	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53983168	53983168	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147756	20147756	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	30638305	30638306	+	IGR	DNP	GG	TA	TA			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32077736	32077736	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32618957	32618957	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	55762285	55762285	+	IGR	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	6462172	6462172	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	16021512	16021512	+	IGR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20861431	20861431	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20878150	20878150	+	IGR	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20989697	20989697	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	42333834	42333834	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	44977499	44977499	+	IGR	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	56719890	56719890	+	IGR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149106109	149106109	+	IGR	DEL	G	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158746423	158746423	+	IGR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	237144777	237144777	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	239216209	239216209	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248570450	248570450	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	39175782	39175782	+	IGR	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	78240218	78240218	+	IGR	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	78240511	78240511	+	IGR	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79987763	79987763	+	IGR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	6195605	6195605	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	15384403	15384403	+	IGR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	20618003	20618003	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16868665	16868665	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	205171946	205171946	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	222909481	222909481	+	IGR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91936511	91936511	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91937652	91937652	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	194284602	194284602	+	IGR	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	76484007	76484007	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	90257609	90257609	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	130058814	130058814	+	IGR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	145767542	145767542	+	IGR	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	156927659	156927659	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165865233	165865233	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189660560	189660560	+	IGR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	19815664	19815664	+	IGR	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63376424	63376424	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69992176	69992176	+	IGR	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70116238	70116238	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20304425	20304425	+	IGR	DEL	C	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	10366554	10366554	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	122001515	122001515	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27979589	27979589	+	IGR	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	39926407	39926407	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	50880941	50880941	+	IGR	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	64326063	64326063	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85997531	85997531	+	IGR	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	138883405	138883405	+	IGR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144703162	144703162	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	57128211	57128211	+	IGR	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	65082552	65082552	+	IGR	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9767087	9767087	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	36953194	36953194	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43528006	43528006	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	21179065	21179065	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43401223	43401223	+	IGR	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68429002	68429002	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48306821	48306822	+	IGR	DNP	AC	GA	GA			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	87351404	87351404	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	45727561	45727561	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	6041733	6041733	+	IGR	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	27910818	27910818	+	IGR	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	48928738	48928738	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	89806220	89806220	+	IGR	DEL	G	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	108675054	108675054	+	IGR	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	113453932	113453932	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	8167718	8167718	+	IGR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	20753489	20753489	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	28270660	28270660	+	IGR	SNP	A	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	53983168	53983168	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20147756	20147756	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	30638305	30638306	+	IGR	DNP	GG	TA	TA			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32077736	32077736	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32618957	32618957	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	55762285	55762285	+	IGR	SNP	A	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	6462172	6462172	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	16021512	16021512	+	IGR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20861431	20861431	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20878150	20878150	+	IGR	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	20989697	20989697	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	34618036	34618036	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	41328083	41328083	+	IGR	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	42333834	42333834	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	44977499	44977499	+	IGR	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	56719890	56719890	+	IGR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149106109	149106109	+	IGR	DEL	G	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	158746423	158746423	+	IGR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	237144777	237144777	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	239216209	239216209	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	248570450	248570450	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	39175782	39175782	+	IGR	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	78240218	78240218	+	IGR	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	78240511	78240511	+	IGR	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79987763	79987763	+	IGR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	6195605	6195605	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	15384403	15384403	+	IGR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	20618003	20618003	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16868665	16868665	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	205171946	205171946	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	222909481	222909481	+	IGR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	76485791	76485791	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91936511	91936511	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91937652	91937652	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	194284602	194284602	+	IGR	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	76484007	76484007	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	90257609	90257609	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	130058814	130058814	+	IGR	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	145767542	145767542	+	IGR	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	156927659	156927659	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	165865233	165865233	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	189660560	189660560	+	IGR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	19815664	19815664	+	IGR	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	63376424	63376424	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	69992176	69992176	+	IGR	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	70116238	70116238	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	20304425	20304425	+	IGR	DEL	C	-	-			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	10366554	10366554	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	122001515	122001515	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	27979589	27979589	+	IGR	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	39926407	39926407	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	50880941	50880941	+	IGR	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	64326063	64326063	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	85997531	85997531	+	IGR	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	138883405	138883405	+	IGR	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	144703162	144703162	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	65082552	65082552	+	IGR	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	9767087	9767087	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	36953194	36953194	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	43528006	43528006	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	21179065	21179065	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	43401223	43401223	+	IGR	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	68429002	68429002	+	IGR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48306821	48306822	+	IGR	DNP	AC	GA	GA			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	87351404	87351404	+	IGR	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	Y	13477301	13477301	+	IGR	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAT1L	57687	broad.mit.edu	37	16	77918564	77918564	+	Silent	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAT1L	57687	broad.mit.edu	37	16	77918564	77918564	+	Silent	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108185290	108185290	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VAV3	10451	broad.mit.edu	37	1	108185290	108185290	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101196759	101196759	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VCAM1	7412	broad.mit.edu	37	1	101196759	101196759	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS11	55823	broad.mit.edu	37	11	118949443	118949443	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDHD1	11169	broad.mit.edu	37	14	55455817	55455817	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDHD1	11169	broad.mit.edu	37	14	55455817	55455817	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR62	284403	broad.mit.edu	37	19	36556621	36556621	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR90	197335	broad.mit.edu	37	16	700343	700343	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR90	197335	broad.mit.edu	37	16	700343	700343	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD2	9671	broad.mit.edu	37	12	108603977	108603977	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WSCD2	9671	broad.mit.edu	37	12	108603977	108603977	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP1	165904	broad.mit.edu	37	3	39229101	39229101	+	Silent	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XIRP1	165904	broad.mit.edu	37	3	39229101	39229101	+	Silent	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP3	63929	broad.mit.edu	37	22	41264943	41264943	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP3	63929	broad.mit.edu	37	22	41264945	41264945	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP3	63929	broad.mit.edu	37	22	41310381	41310381	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP3	63929	broad.mit.edu	37	22	41264943	41264943	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP3	63929	broad.mit.edu	37	22	41264945	41264945	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPNPEP3	63929	broad.mit.edu	37	22	41310381	41310381	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100364484	100364484	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZAN	7455	broad.mit.edu	37	7	100364484	100364484	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE16	9765	broad.mit.edu	37	5	79751468	79751468	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE16	9765	broad.mit.edu	37	5	79751468	79751468	+	Intron	SNP	T	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIM3	114026	broad.mit.edu	37	19	57646819	57646819	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIM3	114026	broad.mit.edu	37	19	57646819	57646819	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF107	51427	broad.mit.edu	37	7	64168599	64168599	+	Silent	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF107	51427	broad.mit.edu	37	7	64168599	64168599	+	Silent	SNP	A	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF226	7769	broad.mit.edu	37	19	44681834	44681834	+	3'UTR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF226	7769	broad.mit.edu	37	19	44681834	44681834	+	3'UTR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF236	7776	broad.mit.edu	37	18	74546608	74546608	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF264	9422	broad.mit.edu	37	19	57703223	57703223	+	5'UTR	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF276	92822	broad.mit.edu	37	16	89800163	89800164	+	Intron	INS	-	G	G	rs147083892	by1000genomes	TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280B	140883	broad.mit.edu	37	22	22843797	22843797	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF280B	140883	broad.mit.edu	37	22	22843797	22843797	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF468	90333	broad.mit.edu	37	19	53352410	53352410	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF468	90333	broad.mit.edu	37	19	53352410	53352410	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF500	26048	broad.mit.edu	37	16	4810689	4810689	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF534	147658	broad.mit.edu	37	19	52937409	52937409	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF534	147658	broad.mit.edu	37	19	52937409	52937409	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF622	90441	broad.mit.edu	37	5	16451832	16451832	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF622	90441	broad.mit.edu	37	5	16451832	16451832	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22363072	22363072	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF676	163223	broad.mit.edu	37	19	22363072	22363072	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23927132	23927132	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF681	148213	broad.mit.edu	37	19	23927132	23927132	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF682	91120	broad.mit.edu	37	19	20133959	20133959	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF682	91120	broad.mit.edu	37	19	20133959	20133959	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57529506	57529506	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF716	441234	broad.mit.edu	37	7	57529506	57529506	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF721	170960	broad.mit.edu	37	4	461512	461512	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF721	170960	broad.mit.edu	37	4	461512	461512	+	Intron	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF746	155061	broad.mit.edu	37	7	149174592	149174592	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF746	155061	broad.mit.edu	37	7	149174592	149174592	+	Intron	SNP	C	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF773	374928	broad.mit.edu	37	19	58018365	58018366	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF773	374928	broad.mit.edu	37	19	58018365	58018366	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238053782	238053782	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZP4	57829	broad.mit.edu	37	1	238053782	238053782	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134627665	134627665	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	28549577	28549577	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29405522	29405523	+	Intron	DNP	GT	AA	AA			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	78269454	78269454	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	36912845	36912845	+	RNA	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	43095294	43095294	+	5'Flank	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166497	85166497	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100549819	100549819	+	5'Flank	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142013518	142013518	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142180301	142180301	+	Intron	SNP	G	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142231463	142231463	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	126964105	126964105	+	5'Flank	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134627665	134627665	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25423684	25423684	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	28549577	28549577	+	Intron	SNP	C	G	G			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	78269454	78269454	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	36912845	36912845	+	RNA	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	20	43095294	43095294	+	5'Flank	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	85166497	85166497	+	Intron	SNP	C	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	100549819	100549819	+	5'Flank	SNP	T	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142013518	142013518	+	Intron	SNP	G	T	T			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142231463	142231463	+	Intron	SNP	T	C	C			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	126964105	126964105	+	5'Flank	SNP	G	A	A			TCGA-44-6144-01A-11D-1753-08	TCGA-44-6144-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
