Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer
AADACL2	344752	broad.mit.edu	37	3	151474791	151474791	+	Silent	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AADACL2	344752	broad.mit.edu	37	3	151474791	151474791	+	Silent	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAGAB	79719	broad.mit.edu	37	15	67524259	67524259	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AAGAB	79719	broad.mit.edu	37	15	67524259	67524259	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARSD1	80755	broad.mit.edu	37	17	41103887	41103887	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AARSD1	80755	broad.mit.edu	37	17	41103887	41103887	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20739552	20739552	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCB5	340273	broad.mit.edu	37	7	20739552	20739552	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48234088	48234088	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC11	85320	broad.mit.edu	37	16	48234088	48234088	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183689508	183689508	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABCC5	10057	broad.mit.edu	37	3	183689508	183689508	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD12B	145447	broad.mit.edu	37	14	51371123	51371123	+	3'UTR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD12B	145447	broad.mit.edu	37	14	51371123	51371123	+	3'UTR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD8	79575	broad.mit.edu	37	19	17405449	17405449	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ABHD8	79575	broad.mit.edu	37	19	17405449	17405449	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35454939	35454939	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35600210	35600210	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35454939	35454939	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACACA	31	broad.mit.edu	37	17	35600210	35600210	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCSL	390110	broad.mit.edu	37	11	44069676	44069676	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACCSL	390110	broad.mit.edu	37	11	44069676	44069676	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT2	10965	broad.mit.edu	37	14	74040031	74040031	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACOT2	10965	broad.mit.edu	37	14	74040031	74040031	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL6	23305	broad.mit.edu	37	5	131323942	131323942	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSL6	23305	broad.mit.edu	37	5	131323942	131323942	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20486821	20486821	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACSM2A	123876	broad.mit.edu	37	16	20486821	20486821	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1B	91	broad.mit.edu	37	12	52377917	52377917	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ACVR1B	91	broad.mit.edu	37	12	52377917	52377917	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM11	4185	broad.mit.edu	37	17	42857163	42857163	+	3'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM11	4185	broad.mit.edu	37	17	42857179	42857179	+	3'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM11	4185	broad.mit.edu	37	17	42857163	42857163	+	3'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM11	4185	broad.mit.edu	37	17	42857179	42857179	+	3'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106899258	106899258	+	RNA	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAM6	8755	broad.mit.edu	37	14	106899258	106899258	+	RNA	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77355074	77355074	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADAMTS18	170692	broad.mit.edu	37	16	77355074	77355074	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100234943	100234943	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ADH1A	124	broad.mit.edu	37	4	100234943	100234943	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGA	175	broad.mit.edu	37	4	178358513	178358513	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGA	175	broad.mit.edu	37	4	178358513	178358513	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPS	8540	broad.mit.edu	37	2	178378692	178378692	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AGPS	8540	broad.mit.edu	37	2	178378692	178378692	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1L	55057	broad.mit.edu	37	1	26672510	26672510	+	5'Flank	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AIM1L	55057	broad.mit.edu	37	1	26672510	26672510	+	5'Flank	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91712731	91712731	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKAP9	10142	broad.mit.edu	37	7	91712731	91712731	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKD1	221264	broad.mit.edu	37	6	109814724	109814726	+	In_Frame_Del	DEL	TCT	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNA	80709	broad.mit.edu	37	9	117124771	117124771	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
AKNA	80709	broad.mit.edu	37	9	117124771	117124771	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH3B2	222	broad.mit.edu	37	11	67432013	67432013	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALDH3B2	222	broad.mit.edu	37	11	67432013	67432013	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX12	239	broad.mit.edu	37	17	6913416	6913416	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX12	239	broad.mit.edu	37	17	6913416	6913416	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45877968	45877968	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ALOX5	240	broad.mit.edu	37	10	45877968	45877968	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114204091	114204091	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANK2	287	broad.mit.edu	37	4	114204091	114204091	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFY1	51479	broad.mit.edu	37	17	4075872	4075872	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKFY1	51479	broad.mit.edu	37	17	4075872	4075872	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD12	23253	broad.mit.edu	37	18	9257679	9257679	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD12	23253	broad.mit.edu	37	18	9257679	9257679	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37414967	37414967	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANKRD30A	91074	broad.mit.edu	37	10	37414967	37414967	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	6030187	6030187	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO2	57101	broad.mit.edu	37	12	6030187	6030187	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26669345	26669345	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ANO3	63982	broad.mit.edu	37	11	26669345	26669345	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APTX	54840	broad.mit.edu	37	9	32987512	32987512	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
APTX	54840	broad.mit.edu	37	9	32987512	32987512	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP11A	9824	broad.mit.edu	37	15	32917863	32917863	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP11A	9824	broad.mit.edu	37	15	32917863	32917863	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP15	55843	broad.mit.edu	37	2	143973950	143973950	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ARHGAP15	55843	broad.mit.edu	37	2	143973950	143973950	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197112663	197112663	+	Missense_Mutation	SNP	G	A	A	rs140646088		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ASPM	259266	broad.mit.edu	37	1	197112663	197112663	+	Missense_Mutation	SNP	G	A	A	rs140646088		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47538623	47538623	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP10D	57205	broad.mit.edu	37	4	47538623	47538623	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A1	10396	broad.mit.edu	37	4	42554575	42554575	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP8A1	10396	broad.mit.edu	37	4	42554575	42554575	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9B	374868	broad.mit.edu	37	18	77133995	77133995	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ATP9B	374868	broad.mit.edu	37	18	77133995	77133995	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT4	338707	broad.mit.edu	37	11	379988	379988	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALNT4	338707	broad.mit.edu	37	11	379988	379988	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT6	9331	broad.mit.edu	37	18	29205560	29205560	+	3'UTR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
B4GALT6	9331	broad.mit.edu	37	18	29205560	29205560	+	3'UTR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11047681	11047681	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAGE2	85319	broad.mit.edu	37	21	11047681	11047681	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69666012	69666012	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BAI3	577	broad.mit.edu	37	6	69666012	69666012	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136597526	136597526	+	Silent	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BCLAF1	9774	broad.mit.edu	37	6	136597526	136597526	+	Silent	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN1	274	broad.mit.edu	37	2	127826484	127826484	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BIN1	274	broad.mit.edu	37	2	127826484	127826484	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLMH	642	broad.mit.edu	37	17	28618575	28618575	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BLMH	642	broad.mit.edu	37	17	28618575	28618575	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP6	654	broad.mit.edu	37	6	7727541	7727541	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMP6	654	broad.mit.edu	37	6	7727541	7727541	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR1A	657	broad.mit.edu	37	10	88681386	88681386	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR1A	657	broad.mit.edu	37	10	88681386	88681386	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR2	659	broad.mit.edu	37	2	203407114	203407114	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BMPR2	659	broad.mit.edu	37	2	203407114	203407114	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRIP1	83990	broad.mit.edu	37	17	59821655	59821655	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK1	84446	broad.mit.edu	37	19	55805585	55805585	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
BRSK1	84446	broad.mit.edu	37	19	55805585	55805585	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf35	219738	broad.mit.edu	37	10	71392867	71392867	+	3'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf35	219738	broad.mit.edu	37	10	71392867	71392867	+	3'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf79	80217	broad.mit.edu	37	10	105952008	105952008	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf79	80217	broad.mit.edu	37	10	105952008	105952008	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf81	79949	broad.mit.edu	37	10	115529412	115529412	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf81	79949	broad.mit.edu	37	10	115531902	115531902	+	Intron	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf81	79949	broad.mit.edu	37	10	115529412	115529412	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf81	79949	broad.mit.edu	37	10	115531902	115531902	+	Intron	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C10orf84	63877	broad.mit.edu	37	10	120070458	120070458	+	Intron	DEL	A	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf66	220004	broad.mit.edu	37	11	61253253	61253253	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C11orf66	220004	broad.mit.edu	37	11	61253253	61253253	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf42	374470	broad.mit.edu	37	12	103699904	103699904	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C12orf42	374470	broad.mit.edu	37	12	103699904	103699904	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf31	144811	broad.mit.edu	37	13	44457980	44457980	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C13orf31	144811	broad.mit.edu	37	13	44457980	44457980	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24923779	24923779	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C15orf2	23742	broad.mit.edu	37	15	24923779	24923779	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf25	147339	broad.mit.edu	37	18	43796479	43796479	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C18orf25	147339	broad.mit.edu	37	18	43796479	43796479	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf44	84167	broad.mit.edu	37	19	16620132	16620132	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C19orf44	84167	broad.mit.edu	37	19	16620132	16620132	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf114	92747	broad.mit.edu	37	20	31891747	31891747	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf114	92747	broad.mit.edu	37	20	31891747	31891747	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf135	140701	broad.mit.edu	37	20	62493424	62493424	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C20orf135	140701	broad.mit.edu	37	20	62493424	62493424	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175716732	175716732	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C5orf25	375484	broad.mit.edu	37	5	175716732	175716732	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf142	90523	broad.mit.edu	37	6	54025128	54025128	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf142	90523	broad.mit.edu	37	6	54025128	54025128	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf221	154288	broad.mit.edu	37	6	74073549	74073549	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C6orf221	154288	broad.mit.edu	37	6	74073549	74073549	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf29	113763	broad.mit.edu	37	7	150027589	150027589	+	Silent	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf29	113763	broad.mit.edu	37	7	150027589	150027589	+	Silent	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf33	202865	broad.mit.edu	37	7	148312477	148312477	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C7orf33	202865	broad.mit.edu	37	7	148312477	148312477	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf150	286343	broad.mit.edu	37	9	12821419	12821419	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf150	286343	broad.mit.edu	37	9	12821419	12821419	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf171	389799	broad.mit.edu	37	9	135447819	135447819	+	Silent	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
C9orf171	389799	broad.mit.edu	37	9	135447819	135447819	+	Silent	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA4	762	broad.mit.edu	37	17	58234889	58234889	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CA4	762	broad.mit.edu	37	17	58234889	58234889	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2595485	2595485	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1C	775	broad.mit.edu	37	12	2595485	2595485	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181706896	181706896	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1E	777	broad.mit.edu	37	1	181706896	181706896	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201062977	201062977	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA1S	779	broad.mit.edu	37	1	201062977	201062977	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CACNA2D1	781	broad.mit.edu	37	7	81599132	81599132	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCOCO2	10241	broad.mit.edu	37	17	46928280	46928281	+	Intron	DEL	AA	-	-	rs10553497		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188243642	188243642	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CALCRL	10203	broad.mit.edu	37	2	188243642	188243642	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1	8536	broad.mit.edu	37	3	9802431	9802431	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CAMK1	8536	broad.mit.edu	37	3	9802431	9802431	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219890775	219890775	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219892628	219892628	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219890775	219890775	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC108	255101	broad.mit.edu	37	2	219892628	219892628	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC110	256309	broad.mit.edu	37	4	186392061	186392061	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC110	256309	broad.mit.edu	37	4	186392061	186392061	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC122	160857	broad.mit.edu	37	13	44411448	44411449	+	Missense_Mutation	DNP	CG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC122	160857	broad.mit.edu	37	13	44411448	44411449	+	Missense_Mutation	DNP	CG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111311505	111311506	+	Intron	DNP	CT	TA	TA			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CCDC63	160762	broad.mit.edu	37	12	111311505	111311506	+	Intron	DNP	CT	TA	TA			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1A	909	broad.mit.edu	37	1	158226889	158226891	+	Intron	DEL	AGG	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CD1A	909	broad.mit.edu	37	1	158226889	158226891	+	Intron	DEL	AGG	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPB	9578	broad.mit.edu	37	14	103433266	103433266	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDC42BPB	9578	broad.mit.edu	37	14	103433266	103433266	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24509704	24509704	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24537382	24537382	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24509704	24509704	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH10	1008	broad.mit.edu	37	5	24537382	24537382	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	65006768	65006768	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH11	1009	broad.mit.edu	37	16	65006768	65006768	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21883399	21883400	+	Intron	DNP	GG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH12	1010	broad.mit.edu	37	5	21883399	21883400	+	Intron	DNP	GG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19483749	19483749	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH18	1016	broad.mit.edu	37	5	19483749	19483749	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59217255	59217255	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH20	28316	broad.mit.edu	37	18	59217255	59217255	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73442341	73442341	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH23	64072	broad.mit.edu	37	10	73442341	73442341	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31294067	31294067	+	Splice_Site	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH6	1004	broad.mit.edu	37	5	31294067	31294067	+	Splice_Site	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26902602	26902602	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDH9	1007	broad.mit.edu	37	5	26902602	26902602	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR1	92211	broad.mit.edu	37	10	85972827	85972827	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDHR1	92211	broad.mit.edu	37	10	85972827	85972827	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK14	5218	broad.mit.edu	37	7	90355768	90355768	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK17	5128	broad.mit.edu	37	12	96707200	96707200	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK17	5128	broad.mit.edu	37	12	96707200	96707200	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK8	1024	broad.mit.edu	37	13	26974649	26974649	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CDK8	1024	broad.mit.edu	37	13	26974649	26974649	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEBPZ	10153	broad.mit.edu	37	2	37443589	37443589	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CEBPZ	10153	broad.mit.edu	37	2	37443589	37443589	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214821312	214821312	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CENPF	1063	broad.mit.edu	37	1	214821312	214821312	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CERKL	375298	broad.mit.edu	37	2	182412572	182412572	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CERKL	375298	broad.mit.edu	37	2	182412572	182412572	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1L	9557	broad.mit.edu	37	1	146728245	146728245	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD1L	9557	broad.mit.edu	37	1	146728245	146728245	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40127915	40127915	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHD6	84181	broad.mit.edu	37	20	40127915	40127915	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHI3L2	1117	broad.mit.edu	37	1	111781582	111781582	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHI3L2	1117	broad.mit.edu	37	1	111781582	111781582	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHP2	63928	broad.mit.edu	37	16	23767157	23767157	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHP2	63928	broad.mit.edu	37	16	23767157	23767157	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA1	1134	broad.mit.edu	37	2	175618297	175618297	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CHRNA1	1134	broad.mit.edu	37	2	175618297	175618297	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CILP	8483	broad.mit.edu	37	15	65489472	65489472	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CILP	8483	broad.mit.edu	37	15	65489472	65489472	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA1	1179	broad.mit.edu	37	1	86951077	86951077	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA1	1179	broad.mit.edu	37	1	86951077	86951077	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA3P	9629	broad.mit.edu	37	1	87101561	87101561	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCA3P	9629	broad.mit.edu	37	1	87101561	87101561	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143043903	143043903	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN1	1180	broad.mit.edu	37	7	143043903	143043903	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN4	1183	broad.mit.edu	37	X	10153244	10153244	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCN4	1183	broad.mit.edu	37	X	10153244	10153244	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCNKA	1187	broad.mit.edu	37	1	16351246	16351246	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CLCNKA	1187	broad.mit.edu	37	1	16351246	16351246	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41327516	41327516	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTN1	1272	broad.mit.edu	37	12	41327516	41327516	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76350316	76350316	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76509915	76509915	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76350316	76350316	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CNTNAP4	85445	broad.mit.edu	37	16	76509915	76509915	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33140770	33140770	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL11A2	1302	broad.mit.edu	37	6	33140770	33140770	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105794442	105794442	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL17A1	1308	broad.mit.edu	37	10	105794442	105794442	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94057003	94057003	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL1A2	1278	broad.mit.edu	37	7	94057003	94057003	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139609156	139609156	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139648853	139648853	+	Intron	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139609156	139609156	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL22A1	169044	broad.mit.edu	37	8	139648853	139648853	+	Intron	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189943287	189943287	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL5A2	1290	broad.mit.edu	37	2	189943287	189943287	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238274635	238274635	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
COL6A3	1293	broad.mit.edu	37	2	238274635	238274635	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO1A	11151	broad.mit.edu	37	16	30198005	30198005	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CORO1A	11151	broad.mit.edu	37	16	30198005	30198005	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA2	1358	broad.mit.edu	37	7	129919383	129919383	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPA2	1358	broad.mit.edu	37	7	129919383	129919383	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131404802	131404802	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPNE4	131034	broad.mit.edu	37	3	131404802	131404802	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125526716	125526716	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CPXM2	119587	broad.mit.edu	37	10	125526716	125526716	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB3	92359	broad.mit.edu	37	19	6465513	6465513	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRB3	92359	broad.mit.edu	37	19	6465513	6465513	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CREB5	9586	broad.mit.edu	37	7	28763753	28763753	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIPT	9419	broad.mit.edu	37	2	46851311	46851311	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRIPT	9419	broad.mit.edu	37	2	46851311	46851311	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD1	83690	broad.mit.edu	37	8	75925021	75925021	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRISPLD1	83690	broad.mit.edu	37	8	75925021	75925021	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYAB	1410	broad.mit.edu	37	11	111782353	111782353	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CRYAB	1410	broad.mit.edu	37	11	111782353	111782353	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19362786	19362786	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSGALNACT1	55790	broad.mit.edu	37	8	19362786	19362786	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2823317	2823318	+	Missense_Mutation	DNP	GG	TT	TT	rs150713388	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD1	64478	broad.mit.edu	37	8	2823317	2823318	+	Missense_Mutation	DNP	GG	TT	TT	rs150713388	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113266336	113266336	+	Intron	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113299383	113299383	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSMD3	114788	broad.mit.edu	37	8	113299383	113299383	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CSTA	1475	broad.mit.edu	37	3	122060140	122060140	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80136945	80136945	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNNA2	1496	broad.mit.edu	37	2	80136945	80136945	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11364898	11364898	+	Missense_Mutation	SNP	C	T	T	rs148824970	byFrequency	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CTNND2	1501	broad.mit.edu	37	5	11364898	11364898	+	Missense_Mutation	SNP	C	T	T	rs148824970	byFrequency	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16957228	16957228	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CUBN	8029	broad.mit.edu	37	10	16957228	16957228	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYSLTR2	57105	broad.mit.edu	37	13	49281193	49281193	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
CYSLTR2	57105	broad.mit.edu	37	13	49281193	49281193	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85416252	85416252	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DACH2	117154	broad.mit.edu	37	X	85416252	85416252	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPK3	1613	broad.mit.edu	37	19	3964952	3964952	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAPK3	1613	broad.mit.edu	37	19	3964952	3964952	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAXX	1616	broad.mit.edu	37	6	33287401	33287401	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DAXX	1616	broad.mit.edu	37	6	33287401	33287401	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBC1	1620	broad.mit.edu	37	9	122075577	122075577	+	Silent	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBC1	1620	broad.mit.edu	37	9	122075577	122075577	+	Silent	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBN1	1627	broad.mit.edu	37	5	176887645	176887645	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBN1	1627	broad.mit.edu	37	5	176887645	176887645	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBX2	440097	broad.mit.edu	37	12	45409971	45409971	+	3'UTR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBX2	440097	broad.mit.edu	37	12	45410014	45410014	+	3'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBX2	440097	broad.mit.edu	37	12	45409971	45409971	+	3'UTR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DBX2	440097	broad.mit.edu	37	12	45410014	45410014	+	3'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50705278	50705278	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCC	1630	broad.mit.edu	37	18	50705278	50705278	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155226379	155226379	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCHS2	54798	broad.mit.edu	37	4	155226379	155226379	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110573947	110573947	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DCX	1641	broad.mit.edu	37	X	110573947	110573947	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2A	27147	broad.mit.edu	37	7	140269611	140269611	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DENND2A	27147	broad.mit.edu	37	7	140269611	140269611	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGCR2	9993	broad.mit.edu	37	22	19029328	19029328	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGCR2	9993	broad.mit.edu	37	22	19029328	19029328	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKZ	8525	broad.mit.edu	37	11	46398736	46398736	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DGKZ	8525	broad.mit.edu	37	11	46398736	46398736	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX32	55760	broad.mit.edu	37	10	127530320	127530320	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX32	55760	broad.mit.edu	37	10	127530320	127530320	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX9	1660	broad.mit.edu	37	1	182827319	182827319	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DHX9	1660	broad.mit.edu	37	1	182827319	182827319	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32503071	32503071	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32509365	32509365	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32503071	32503071	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMD	1756	broad.mit.edu	37	X	32509365	32509365	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL1	1657	broad.mit.edu	37	5	118479669	118479669	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DMXL1	1657	broad.mit.edu	37	5	118479669	118479669	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13786382	13786382	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH5	1767	broad.mit.edu	37	5	13786382	13786382	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11592948	11592949	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11827329	11827329	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11592948	11592949	+	Nonsense_Mutation	DNP	CC	AA	AA			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNAH9	1770	broad.mit.edu	37	17	11827329	11827329	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM1	1759	broad.mit.edu	37	9	131011105	131011105	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DNM1	1759	broad.mit.edu	37	9	131011105	131011105	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225710297	225710297	+	Silent	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK10	55619	broad.mit.edu	37	2	225710297	225710297	+	Silent	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	128821640	128821640	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DOCK1	1793	broad.mit.edu	37	10	128821640	128821640	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116520102	116520102	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DPP10	57628	broad.mit.edu	37	2	116520102	116520102	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117309750	117309750	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DSCAML1	57453	broad.mit.edu	37	11	117309750	117309750	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56342390	56342390	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DST	667	broad.mit.edu	37	6	56342390	56342390	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS4L	11062	broad.mit.edu	37	7	107215863	107215863	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUS4L	11062	broad.mit.edu	37	7	107215863	107215863	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	348145	348145	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DUSP22	56940	broad.mit.edu	37	6	348145	348145	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71753445	71753445	+	Silent	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
DYSF	8291	broad.mit.edu	37	2	71753445	71753445	+	Silent	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EDA2R	60401	broad.mit.edu	37	X	65822556	65822556	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A1P9	441032	broad.mit.edu	37	4	106406416	106406416	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EEF1A1P9	441032	broad.mit.edu	37	4	106406416	106406416	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38370347	38370347	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EGFLAM	133584	broad.mit.edu	37	5	38370347	38370347	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF2	1998	broad.mit.edu	37	4	139980359	139980359	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELF2	1998	broad.mit.edu	37	4	139980359	139980359	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELL	8178	broad.mit.edu	37	19	18561235	18561235	+	Intron	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL5	60481	broad.mit.edu	37	6	53133856	53133856	+	3'UTR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ELOVL5	60481	broad.mit.edu	37	6	53133856	53133856	+	3'UTR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EMID2	136227	broad.mit.edu	37	7	101090977	101090977	+	Silent	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD1	953	broad.mit.edu	37	10	97583120	97583120	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ENTPD1	953	broad.mit.edu	37	10	97583120	97583120	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131191341	131191341	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPB41L2	2037	broad.mit.edu	37	6	131191341	131191341	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66201737	66201737	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHA5	2044	broad.mit.edu	37	4	66201737	66201737	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142562114	142562114	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPHB6	2051	broad.mit.edu	37	7	142562114	142562114	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L3	79574	broad.mit.edu	37	1	110300520	110300520	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EPS8L3	79574	broad.mit.edu	37	1	110300520	110300520	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERLIN2	11160	broad.mit.edu	37	8	37605553	37605553	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERLIN2	11160	broad.mit.edu	37	8	37605553	37605553	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERP44	23071	broad.mit.edu	37	9	102778708	102778708	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ERP44	23071	broad.mit.edu	37	9	102778708	102778708	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXO1	9156	broad.mit.edu	37	1	242030408	242030408	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXO1	9156	broad.mit.edu	37	1	242030408	242030408	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC1	55763	broad.mit.edu	37	4	56756339	56756339	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC1	55763	broad.mit.edu	37	4	56756339	56756339	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6	54536	broad.mit.edu	37	10	94700597	94700597	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
EXOC6	54536	broad.mit.edu	37	10	94700597	94700597	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169493193	169493193	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
F5	2153	broad.mit.edu	37	1	169493193	169493193	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FA2H	79152	broad.mit.edu	37	16	74773857	74773857	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FA2H	79152	broad.mit.edu	37	16	74773857	74773857	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123C	205147	broad.mit.edu	37	2	131519959	131519959	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM123C	205147	broad.mit.edu	37	2	131519959	131519959	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187615876	187615876	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM171B	165215	broad.mit.edu	37	2	187615876	187615876	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179A	165186	broad.mit.edu	37	2	29268297	29268297	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM179A	165186	broad.mit.edu	37	2	29268297	29268297	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A4	151647	broad.mit.edu	37	3	68788090	68788090	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM19A4	151647	broad.mit.edu	37	3	68788090	68788090	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM26E	254228	broad.mit.edu	37	6	116836661	116836661	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM26E	254228	broad.mit.edu	37	6	116836661	116836661	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37026894	37026894	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM47C	442444	broad.mit.edu	37	X	37026894	37026894	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55D	54827	broad.mit.edu	37	11	114453728	114453728	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM55D	54827	broad.mit.edu	37	11	114453728	114453728	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190129757	190129758	+	Intron	DNP	GG	TC	TC	rs12079649	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM5C	339479	broad.mit.edu	37	1	190129757	190129758	+	Intron	DNP	GG	TC	TC	rs12079649	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM63B	54629	broad.mit.edu	37	15	59064464	59064464	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM63B	54629	broad.mit.edu	37	15	59064464	59064464	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12232543	12232543	+	Intron	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12237468	12237468	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12232543	12232543	+	Intron	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM66D	100132923	broad.mit.edu	37	8	12237468	12237468	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71A	149647	broad.mit.edu	37	1	212798394	212798394	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAM71A	149647	broad.mit.edu	37	1	212798394	212798394	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10135898	10135898	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FANCD2	2177	broad.mit.edu	37	3	10135898	10135898	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP1	10160	broad.mit.edu	37	13	99100408	99100408	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FARP1	10160	broad.mit.edu	37	13	99100408	99100408	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAS	355	broad.mit.edu	37	10	90768652	90768652	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FAS	355	broad.mit.edu	37	10	90768652	90768652	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FATE1	89885	broad.mit.edu	37	X	150890936	150890936	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FATE1	89885	broad.mit.edu	37	X	150890936	150890936	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBN2	2201	broad.mit.edu	37	5	127648633	127648633	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL13	222235	broad.mit.edu	37	7	102667916	102667916	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FBXL13	222235	broad.mit.edu	37	7	102667916	102667916	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCAR	2204	broad.mit.edu	37	19	55385836	55385836	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCAR	2204	broad.mit.edu	37	19	55385836	55385836	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN2	2220	broad.mit.edu	37	9	137777622	137777622	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FCN2	2220	broad.mit.edu	37	9	137777622	137777622	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER	2241	broad.mit.edu	37	5	108295116	108295116	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FER	2241	broad.mit.edu	37	5	108295116	108295116	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP3	2287	broad.mit.edu	37	14	45590603	45590603	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FKBP3	2287	broad.mit.edu	37	14	45590603	45590603	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240306177	240306178	+	Intron	DNP	TG	AA	AA			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240306225	240306225	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240306177	240306178	+	Intron	DNP	TG	AA	AA			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FMN2	56776	broad.mit.edu	37	1	240306225	240306225	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG1	2483	broad.mit.edu	37	4	190883020	190883020	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRG1	2483	broad.mit.edu	37	4	190883020	190883020	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD6	122786	broad.mit.edu	37	14	52192462	52192462	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMD6	122786	broad.mit.edu	37	14	52192462	52192462	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD1	22844	broad.mit.edu	37	9	37746166	37746166	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD1	22844	broad.mit.edu	37	9	37746166	37746166	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12701488	12701488	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12708435	12708435	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12701488	12701488	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FRMPD4	9758	broad.mit.edu	37	X	12708435	12708435	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTMT	94033	broad.mit.edu	37	5	121187725	121187725	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FTMT	94033	broad.mit.edu	37	5	121187725	121187725	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD6	53826	broad.mit.edu	37	11	117711112	117711112	+	Intron	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
FXYD6	53826	broad.mit.edu	37	11	117711112	117711112	+	Intron	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB1	2560	broad.mit.edu	37	4	47163248	47163248	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26806081	26806081	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRB3	2562	broad.mit.edu	37	15	26806081	26806081	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG1	2565	broad.mit.edu	37	4	46086071	46086071	+	Splice_Site	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GABRG1	2565	broad.mit.edu	37	4	46086071	46086071	+	Splice_Site	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAN	8139	broad.mit.edu	37	16	81410975	81410975	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAN	8139	broad.mit.edu	37	16	81410975	81410975	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L2	246176	broad.mit.edu	37	17	34072004	34072004	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GAS2L2	246176	broad.mit.edu	37	17	34072004	34072004	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA3	57733	broad.mit.edu	37	4	22749245	22749245	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GBA3	57733	broad.mit.edu	37	4	22749245	22749245	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDAP1L1	78997	broad.mit.edu	37	20	42893134	42893134	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GDAP1L1	78997	broad.mit.edu	37	20	42893134	42893134	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GH2	2689	broad.mit.edu	37	17	61958500	61958500	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GH2	2689	broad.mit.edu	37	17	61958500	61958500	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121741987	121741987	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLI2	2736	broad.mit.edu	37	2	121741987	121741987	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLIPR1	11010	broad.mit.edu	37	12	75875626	75875626	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLIPR1	11010	broad.mit.edu	37	12	75875626	75875626	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA1	2741	broad.mit.edu	37	5	151229879	151229879	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GLRA1	2741	broad.mit.edu	37	5	151229879	151229879	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAS	2778	broad.mit.edu	37	20	57478684	57478684	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNAS	2778	broad.mit.edu	37	20	57478684	57478684	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNG4	2786	broad.mit.edu	37	1	235715385	235715385	+	3'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNG4	2786	broad.mit.edu	37	1	235715385	235715385	+	3'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GNL3	26354	broad.mit.edu	37	3	52727190	52727190	+	Intron	DEL	T	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167745634	167745634	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLIM4	27333	broad.mit.edu	37	3	167745634	167745634	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLT1B	51026	broad.mit.edu	37	12	21661496	21661496	+	Splice_Site	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GOLT1B	51026	broad.mit.edu	37	12	21661496	21661496	+	Splice_Site	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47684905	47684905	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR115	221393	broad.mit.edu	37	6	47684905	47684905	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR55	9290	broad.mit.edu	37	2	231774831	231774831	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR55	9290	broad.mit.edu	37	2	231775406	231775406	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR55	9290	broad.mit.edu	37	2	231774831	231774831	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPR55	9290	broad.mit.edu	37	2	231775406	231775406	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRIN1	114787	broad.mit.edu	37	5	176026691	176026691	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GPRIN1	114787	broad.mit.edu	37	5	176026691	176026691	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAP2	9402	broad.mit.edu	37	22	40366981	40366981	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRAP2	9402	broad.mit.edu	37	22	40366981	40366981	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREM2	64388	broad.mit.edu	37	1	240656261	240656261	+	3'UTR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GREM2	64388	broad.mit.edu	37	1	240656261	240656261	+	3'UTR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102503141	102503141	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIK2	2898	broad.mit.edu	37	6	102503141	102503141	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104375591	104375591	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRIN3A	116443	broad.mit.edu	37	9	104375591	104375591	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM5	2915	broad.mit.edu	37	11	88300971	88300971	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GRM5	2915	broad.mit.edu	37	11	88300971	88300971	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSDMD	79792	broad.mit.edu	37	8	144641996	144641996	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GSDMD	79792	broad.mit.edu	37	8	144641996	144641996	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27544602	27544602	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
GTF3C1	2975	broad.mit.edu	37	16	27544602	27544602	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HACL1	26061	broad.mit.edu	37	3	15613321	15613321	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HARS2	23438	broad.mit.edu	37	5	140073645	140073645	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HARS2	23438	broad.mit.edu	37	5	140073645	140073645	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HDAC4	9759	broad.mit.edu	37	2	240066539	240066539	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41057330	41057330	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEATR7B2	133558	broad.mit.edu	37	5	41057330	41057330	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65221064	65221064	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HELZ	9931	broad.mit.edu	37	17	65221064	65221064	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65474945	65474945	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HEPH	9843	broad.mit.edu	37	X	65474945	65474945	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2P4	440362	broad.mit.edu	37	16	32163799	32163799	+	RNA	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HERC2P4	440362	broad.mit.edu	37	16	32163799	32163799	+	RNA	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK1	204851	broad.mit.edu	37	1	114505013	114505013	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HIPK1	204851	broad.mit.edu	37	1	114505013	114505013	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGA2	8091	broad.mit.edu	37	12	66221815	66221815	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HMGA2	8091	broad.mit.edu	37	12	66221815	66221815	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA1	3198	broad.mit.edu	37	7	27135409	27135409	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXA1	3198	broad.mit.edu	37	7	27135409	27135409	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB2	3212	broad.mit.edu	37	17	46620396	46620396	+	3'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HOXB2	3212	broad.mit.edu	37	17	46620396	46620396	+	3'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22222444	22222444	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
HSPG2	3339	broad.mit.edu	37	1	22222444	22222444	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT81	28981	broad.mit.edu	37	12	110628939	110628939	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IFT81	28981	broad.mit.edu	37	12	110628939	110628939	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130409975	130409975	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IGSF1	3547	broad.mit.edu	37	X	130409975	130409975	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F10	84639	broad.mit.edu	37	2	113832335	113832335	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F10	84639	broad.mit.edu	37	2	113832335	113832335	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F5	26525	broad.mit.edu	37	2	113820090	113820090	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F5	26525	broad.mit.edu	37	2	113820090	113820090	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F9	56300	broad.mit.edu	37	2	113742478	113742478	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1F9	56300	broad.mit.edu	37	2	113742478	113742478	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	29973175	29973175	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL1	11141	broad.mit.edu	37	X	29973175	29973175	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104440260	104440260	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RAPL2	26280	broad.mit.edu	37	X	104440260	104440260	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RL1	9173	broad.mit.edu	37	2	102964500	102964500	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL1RL1	9173	broad.mit.edu	37	2	102964500	102964500	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL22	50616	broad.mit.edu	37	12	68647059	68647059	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL22	50616	broad.mit.edu	37	12	68647059	68647059	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL23R	149233	broad.mit.edu	37	1	67685539	67685539	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL29	282618	broad.mit.edu	37	19	39788642	39788642	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL29	282618	broad.mit.edu	37	19	39788642	39788642	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RA	3559	broad.mit.edu	37	10	6061915	6061915	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RA	3559	broad.mit.edu	37	10	6063697	6063697	+	Intron	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RA	3559	broad.mit.edu	37	10	6061915	6061915	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL2RA	3559	broad.mit.edu	37	10	6063697	6063697	+	Intron	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL31RA	133396	broad.mit.edu	37	5	55168177	55168177	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IL31RA	133396	broad.mit.edu	37	5	55168177	55168177	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBE	83729	broad.mit.edu	37	12	57850274	57850274	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INHBE	83729	broad.mit.edu	37	12	57850274	57850274	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5A	3632	broad.mit.edu	37	10	134463832	134463832	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INPP5A	3632	broad.mit.edu	37	10	134463832	134463832	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSL5	10022	broad.mit.edu	37	1	67263820	67263820	+	Missense_Mutation	SNP	C	A	A	rs144286383		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INSL5	10022	broad.mit.edu	37	1	67263820	67263820	+	Missense_Mutation	SNP	C	A	A	rs144286383		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4L1	285905	broad.mit.edu	37	7	64639799	64639799	+	RNA	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
INTS4L1	285905	broad.mit.edu	37	7	64639799	64639799	+	RNA	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPW	3653	broad.mit.edu	37	15	25417793	25417793	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IPW	3653	broad.mit.edu	37	15	25417793	25417793	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCE	23288	broad.mit.edu	37	7	2641191	2641191	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
IQCE	23288	broad.mit.edu	37	7	2641191	2641191	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145534009	145534009	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGA10	8515	broad.mit.edu	37	1	145534009	145534009	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31422734	31422734	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGAD	3681	broad.mit.edu	37	16	31422734	31422734	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP2	26548	broad.mit.edu	37	X	70522111	70522111	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITGB1BP2	26548	broad.mit.edu	37	X	70522111	70522111	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156641181	156641181	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156650042	156650042	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156641181	156641181	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ITK	3702	broad.mit.edu	37	5	156650042	156650042	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA2	3737	broad.mit.edu	37	1	111146095	111146095	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNA2	3737	broad.mit.edu	37	1	111146095	111146095	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	47989564	47989564	+	Missense_Mutation	SNP	G	T	T	rs35831424		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNB1	3745	broad.mit.edu	37	20	47989564	47989564	+	Missense_Mutation	SNP	G	T	T	rs35831424		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215408346	215408346	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK2	3776	broad.mit.edu	37	1	215408346	215408346	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK6	9424	broad.mit.edu	37	19	38817960	38817960	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNK6	9424	broad.mit.edu	37	19	38817960	38817960	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36663793	36663793	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KCNU1	157855	broad.mit.edu	37	8	36663793	36663793	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELC1	79070	broad.mit.edu	37	13	103441357	103441357	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KDELC1	79070	broad.mit.edu	37	13	103441357	103441357	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0101	9768	broad.mit.edu	37	15	64673508	64673508	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0101	9768	broad.mit.edu	37	15	64673508	64673508	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0586	9786	broad.mit.edu	37	14	58941420	58941420	+	Silent	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA0586	9786	broad.mit.edu	37	14	58941420	58941420	+	Silent	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1529	57653	broad.mit.edu	37	9	100126312	100126312	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1529	57653	broad.mit.edu	37	9	100126312	100126312	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1614	57710	broad.mit.edu	37	1	180886014	180886014	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA1614	57710	broad.mit.edu	37	1	180886014	180886014	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73961404	73961404	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73963752	73963752	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73961404	73961404	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIAA2022	340533	broad.mit.edu	37	X	73963752	73963752	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200960046	200960046	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF21B	23046	broad.mit.edu	37	1	200960046	200960046	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57963420	57963420	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIF5A	3798	broad.mit.edu	37	12	57963420	57963420	+	Frame_Shift_Del	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL1	3802	broad.mit.edu	37	19	55283152	55283152	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DL1	3802	broad.mit.edu	37	19	55283152	55283152	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR2DS4	3809	broad.mit.edu	37	19	55354367	55354367	+	Missense_Mutation	SNP	A	G	G	rs1130508		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55344334	55344334	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DL1	3811	broad.mit.edu	37	19	55344334	55344334	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DX1	90011	broad.mit.edu	37	19	55044397	55044397	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIR3DX1	90011	broad.mit.edu	37	19	55044397	55044397	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL3	84623	broad.mit.edu	37	11	126301280	126301280	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KIRREL3	84623	broad.mit.edu	37	11	126301280	126301280	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70281875	70281875	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL1	57626	broad.mit.edu	37	13	70281875	70281875	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL30	377007	broad.mit.edu	37	2	239049495	239049495	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLHL30	377007	broad.mit.edu	37	2	239049495	239049495	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRC3	3823	broad.mit.edu	37	12	10568380	10568380	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRC3	3823	broad.mit.edu	37	12	10584683	10584683	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRC3	3823	broad.mit.edu	37	12	10568380	10568380	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KLRC3	3823	broad.mit.edu	37	12	10584683	10584683	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	A	A	rs121913529		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRAS	3845	broad.mit.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	A	A	rs121913529		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT20	54474	broad.mit.edu	37	17	39034618	39034618	+	Splice_Site	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT20	54474	broad.mit.edu	37	17	39034618	39034618	+	Splice_Site	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT33A	3883	broad.mit.edu	37	17	39502936	39502936	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT33A	3883	broad.mit.edu	37	17	39502936	39502936	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT77	374454	broad.mit.edu	37	12	53096691	53096691	+	Silent	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRT77	374454	broad.mit.edu	37	12	53096691	53096691	+	Silent	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP4-11	653240	broad.mit.edu	37	17	39274206	39274206	+	Missense_Mutation	SNP	C	T	T	rs79388709		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP4-1	85285	broad.mit.edu	37	17	39341068	39341068	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP4-1	85285	broad.mit.edu	37	17	39341068	39341068	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP8-1	337879	broad.mit.edu	37	21	32185358	32185358	+	Missense_Mutation	SNP	C	A	A	rs140820436	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
KRTAP8-1	337879	broad.mit.edu	37	21	32185358	32185358	+	Missense_Mutation	SNP	C	A	A	rs140820436	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR1	3903	broad.mit.edu	37	19	54875801	54875801	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LAIR1	3903	broad.mit.edu	37	19	54875801	54875801	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LDLRAD3	143458	broad.mit.edu	37	11	36103486	36103486	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD3	23592	broad.mit.edu	37	12	65633891	65633891	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LEMD3	23592	broad.mit.edu	37	12	65633891	65633891	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA1	11024	broad.mit.edu	37	19	55107774	55107774	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA1	11024	broad.mit.edu	37	19	55107774	55107774	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55086241	55086241	+	Silent	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA2	11027	broad.mit.edu	37	19	55086241	55086241	+	Silent	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA4	23547	broad.mit.edu	37	19	54849250	54849250	+	Nonsense_Mutation	SNP	G	T	T	rs149766788	byFrequency	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRA4	23547	broad.mit.edu	37	19	54849250	54849250	+	Nonsense_Mutation	SNP	G	T	T	rs149766788	byFrequency	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55175419	55175419	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRB4	11006	broad.mit.edu	37	19	55175419	55175419	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRP2	79166	broad.mit.edu	37	19	55220481	55220481	+	RNA	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LILRP2	79166	broad.mit.edu	37	19	55220481	55220481	+	RNA	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285501	285501	broad.mit.edu	37	4	178896990	178896990	+	RNA	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC285501	285501	broad.mit.edu	37	4	178896990	178896990	+	RNA	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC399815	399815	broad.mit.edu	37	10	124640285	124640285	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC399815	399815	broad.mit.edu	37	10	124640285	124640285	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440563	440563	broad.mit.edu	37	1	13182980	13182980	+	3'UTR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC440563	440563	broad.mit.edu	37	1	13182980	13182980	+	3'UTR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22297934	22297934	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22298467	22298467	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22297934	22297934	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LOC727924	727924	broad.mit.edu	37	15	22298467	22298467	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT4	254531	broad.mit.edu	37	15	34652348	34652348	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPCAT4	254531	broad.mit.edu	37	15	34652348	34652348	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN1	23175	broad.mit.edu	37	2	11922600	11922600	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPIN1	23175	broad.mit.edu	37	2	11922600	11922600	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99771542	99771542	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LPPR4	9890	broad.mit.edu	37	1	99771542	99771542	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN5	145581	broad.mit.edu	37	14	42356224	42356224	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRFN5	145581	broad.mit.edu	37	14	42356224	42356224	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRGUK	136332	broad.mit.edu	37	7	133881945	133881945	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRGUK	136332	broad.mit.edu	37	7	133881945	133881945	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141083484	141083484	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141083490	141083490	+	Intron	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141533673	141533673	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141083484	141083484	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141083490	141083490	+	Intron	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRP1B	53353	broad.mit.edu	37	2	141533673	141533673	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44152130	44152130	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRPPRC	10128	broad.mit.edu	37	2	44152130	44152130	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC3B	116135	broad.mit.edu	37	3	26751340	26751340	+	Silent	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC3B	116135	broad.mit.edu	37	3	26751340	26751340	+	Silent	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC46	90506	broad.mit.edu	37	17	45913760	45913760	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRC46	90506	broad.mit.edu	37	17	45913760	45913760	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85518290	85518290	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ1	84125	broad.mit.edu	37	12	85518290	85518290	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ3	127255	broad.mit.edu	37	1	74507107	74507107	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRRIQ3	127255	broad.mit.edu	37	1	74507107	74507107	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRSAM1	90678	broad.mit.edu	37	9	130251778	130251778	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LRSAM1	90678	broad.mit.edu	37	9	130251778	130251778	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235918893	235918893	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
LYST	1130	broad.mit.edu	37	1	235918893	235918893	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MACF1	23499	broad.mit.edu	37	1	39951479	39951479	+	3'UTR	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAEL	84944	broad.mit.edu	37	1	166962174	166962174	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAEL	84944	broad.mit.edu	37	1	166962174	166962174	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA12	4111	broad.mit.edu	37	X	151896252	151896252	+	RNA	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEA12	4111	broad.mit.edu	37	X	151896252	151896252	+	RNA	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140926218	140926218	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAGEC3	139081	broad.mit.edu	37	X	140926218	140926218	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210561275	210561275	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAP2	4133	broad.mit.edu	37	2	210561275	210561275	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8	5599	broad.mit.edu	37	10	49642911	49642911	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPK8	5599	broad.mit.edu	37	10	49642911	49642911	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKBP1	23005	broad.mit.edu	37	15	42107526	42107526	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAPKBP1	23005	broad.mit.edu	37	15	42107526	42107526	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST1	22983	broad.mit.edu	37	19	12951814	12951814	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MAST1	22983	broad.mit.edu	37	19	12951814	12951814	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN3	4148	broad.mit.edu	37	2	20197026	20197026	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MATN3	4148	broad.mit.edu	37	2	20197026	20197026	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA1	266727	broad.mit.edu	37	6	37626302	37626302	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47530708	47530708	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MDGA2	161357	broad.mit.edu	37	14	47530708	47530708	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEOX2	4223	broad.mit.edu	37	7	15652242	15652242	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MEOX2	4223	broad.mit.edu	37	7	15652242	15652242	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC26647	219557	broad.mit.edu	37	7	88424136	88424136	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MGC26647	219557	broad.mit.edu	37	7	88424136	88424136	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR520C	574476	broad.mit.edu	37	19	54210695	54210695	+	5'Flank	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MIR520C	574476	broad.mit.edu	37	19	54210695	54210695	+	5'Flank	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MLLT3	4300	broad.mit.edu	37	9	20414343	20414343	+	Silent	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP2	4313	broad.mit.edu	37	16	55519270	55519270	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP2	4313	broad.mit.edu	37	16	55519270	55519270	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44639750	44639750	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MMP9	4318	broad.mit.edu	37	20	44639750	44639750	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED2	744	broad.mit.edu	37	11	30517121	30517121	+	Intron	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MPPED2	744	broad.mit.edu	37	11	30517121	30517121	+	Intron	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC2	9902	broad.mit.edu	37	17	60754845	60754845	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRC2	9902	broad.mit.edu	37	17	60754845	60754845	+	Nonsense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS27	23107	broad.mit.edu	37	5	71616172	71616172	+	5'Flank	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MRPS27	23107	broad.mit.edu	37	5	71616172	71616172	+	5'Flank	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60154083	60154083	+	Intron	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A14	84689	broad.mit.edu	37	11	60154083	60154083	+	Intron	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A2	2206	broad.mit.edu	37	11	59861070	59861070	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A2	2206	broad.mit.edu	37	11	59861070	59861070	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A4A	51338	broad.mit.edu	37	11	60073661	60073661	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MS4A4A	51338	broad.mit.edu	37	11	60073661	60073661	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1B	4544	broad.mit.edu	37	11	92714571	92714571	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTNR1B	4544	broad.mit.edu	37	11	92714571	92714571	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11308080	11308080	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTOR	2475	broad.mit.edu	37	1	11308080	11308080	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTP18	51537	broad.mit.edu	37	22	30823048	30823048	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MTP18	51537	broad.mit.edu	37	22	30823048	30823048	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9061893	9061893	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9090511	9090511	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9061893	9061893	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC16	94025	broad.mit.edu	37	19	9090511	9090511	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1084795	1084795	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MUC2	4583	broad.mit.edu	37	11	1084795	1084795	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC3	4607	broad.mit.edu	37	11	47368495	47368495	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYBPC3	4607	broad.mit.edu	37	11	47368495	47368495	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10431950	10431950	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH2	4620	broad.mit.edu	37	17	10431950	10431950	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH3	4621	broad.mit.edu	37	17	10543658	10543658	+	Silent	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYH3	4621	broad.mit.edu	37	17	10543658	10543658	+	Silent	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL2	4633	broad.mit.edu	37	12	111349011	111349011	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYL2	4633	broad.mit.edu	37	12	111349011	111349011	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO19	80179	broad.mit.edu	37	17	34881202	34881202	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO19	80179	broad.mit.edu	37	17	34881202	34881202	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47390574	47390574	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYO5B	4645	broad.mit.edu	37	18	47390574	47390574	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2020568	2020568	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2057201	2057201	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2020568	2020568	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYOM2	9172	broad.mit.edu	37	8	2057201	2057201	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1	4661	broad.mit.edu	37	20	62836349	62836349	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1	4661	broad.mit.edu	37	20	62839561	62839561	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1	4661	broad.mit.edu	37	20	62836349	62836349	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
MYT1	4661	broad.mit.edu	37	20	62839561	62839561	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89902008	89902008	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAALAD2	10003	broad.mit.edu	37	11	89902008	89902008	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGK	55577	broad.mit.edu	37	2	71303832	71303832	+	Splice_Site	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAGK	55577	broad.mit.edu	37	2	71303832	71303832	+	Splice_Site	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78334269	78334269	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NAV3	89795	broad.mit.edu	37	12	78334269	78334269	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15358906	15358906	+	Silent	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NBAS	51594	broad.mit.edu	37	2	15358906	15358906	+	Silent	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54901471	54901471	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54912534	54912534	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54901471	54901471	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP1L	3071	broad.mit.edu	37	12	54912534	54912534	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133543133	133543134	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCKAP5	344148	broad.mit.edu	37	2	133543133	133543134	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NCOR1	9611	broad.mit.edu	37	17	16011523	16011523	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDN	4692	broad.mit.edu	37	15	23932034	23932034	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NDN	4692	broad.mit.edu	37	15	23932034	23932034	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152551035	152551035	+	Splice_Site	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEB	4703	broad.mit.edu	37	2	152551035	152551035	+	Splice_Site	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD1	121441	broad.mit.edu	37	12	97313900	97313900	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD1	121441	broad.mit.edu	37	12	97313900	97313900	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NEDD4L	23327	broad.mit.edu	37	18	56063337	56063337	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	20969029	20969029	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NELL1	4745	broad.mit.edu	37	11	20969029	20969029	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70451042	70451042	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NETO1	81832	broad.mit.edu	37	18	70451042	70451042	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIC	4782	broad.mit.edu	37	19	3452574	3452574	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NFIC	4782	broad.mit.edu	37	19	3452574	3452574	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37016102	37016102	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NIPBL	25836	broad.mit.edu	37	5	37016102	37016102	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX6-1	4825	broad.mit.edu	37	4	85414744	85414744	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NKX6-1	4825	broad.mit.edu	37	4	85414744	85414744	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPS	594857	broad.mit.edu	37	10	129347661	129347661	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NPS	594857	broad.mit.edu	37	10	129347661	129347661	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A3	8013	broad.mit.edu	37	9	102594968	102594968	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NR4A3	8013	broad.mit.edu	37	9	102594968	102594968	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115383307	115383307	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRAP	4892	broad.mit.edu	37	10	115383307	115383307	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107871486	107871486	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRCAM	4897	broad.mit.edu	37	7	107871486	107871486	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84745264	84745264	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NRG3	10718	broad.mit.edu	37	10	84745264	84745264	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87482440	87482440	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK2	4915	broad.mit.edu	37	9	87482440	87482440	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88679799	88679799	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NTRK3	4916	broad.mit.edu	37	15	88679799	88679799	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135311040	135311040	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
NUP205	23165	broad.mit.edu	37	7	135311040	135311040	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM1	10439	broad.mit.edu	37	9	138011774	138011775	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM1	10439	broad.mit.edu	37	9	138011774	138011775	+	Missense_Mutation	DNP	GG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102270473	102270473	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OLFM3	118427	broad.mit.edu	37	1	102270473	102270473	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10AG1	282770	broad.mit.edu	37	11	55735507	55735507	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10AG1	282770	broad.mit.edu	37	11	55735507	55735507	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10J3	441911	broad.mit.edu	37	1	159283954	159283954	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10J3	441911	broad.mit.edu	37	1	159283954	159283954	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10T2	128360	broad.mit.edu	37	1	158368884	158368884	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR10T2	128360	broad.mit.edu	37	1	158368884	158368884	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A14	135941	broad.mit.edu	37	7	143827061	143827061	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2A14	135941	broad.mit.edu	37	7	143827061	143827061	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2F1	26211	broad.mit.edu	37	7	143657537	143657537	+	Silent	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2F1	26211	broad.mit.edu	37	7	143657537	143657537	+	Silent	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248185905	248185905	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L13	284521	broad.mit.edu	37	1	248185905	248185905	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224588	248224588	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2L3	391192	broad.mit.edu	37	1	248224588	248224588	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487473	248487473	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR2M7	391196	broad.mit.edu	37	1	248487473	248487473	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K15	81127	broad.mit.edu	37	14	20443947	20443947	+	Silent	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4K15	81127	broad.mit.edu	37	14	20443947	20443947	+	Silent	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N3P	390539	broad.mit.edu	37	15	22413842	22413842	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N3P	390539	broad.mit.edu	37	15	22413842	22413842	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22383396	22383396	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR4N4	283694	broad.mit.edu	37	15	22383396	22383396	+	Nonsense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51I2	390064	broad.mit.edu	37	11	5475122	5475122	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51I2	390064	broad.mit.edu	37	11	5475122	5475122	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51M1	390059	broad.mit.edu	37	11	5410856	5410856	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR51M1	390059	broad.mit.edu	37	11	5410856	5410856	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52B6	340980	broad.mit.edu	37	11	5603032	5603032	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52B6	340980	broad.mit.edu	37	11	5603032	5603032	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52E2	119678	broad.mit.edu	37	11	5080580	5080580	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52E2	119678	broad.mit.edu	37	11	5080580	5080580	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N4	390072	broad.mit.edu	37	11	5776693	5776693	+	Silent	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR52N4	390072	broad.mit.edu	37	11	5776693	5776693	+	Silent	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K3	403277	broad.mit.edu	37	3	98109906	98109906	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5K3	403277	broad.mit.edu	37	3	98109906	98109906	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L2	26338	broad.mit.edu	37	11	55595244	55595244	+	Missense_Mutation	SNP	C	A	A	rs142870159		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR5L2	26338	broad.mit.edu	37	11	55595244	55595244	+	Missense_Mutation	SNP	C	A	A	rs142870159		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H2	390151	broad.mit.edu	37	11	55873077	55873077	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OR8H2	390151	broad.mit.edu	37	11	55873077	55873077	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26680870	26680870	+	3'UTR	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26689581	26689581	+	Splice_Site	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26680870	26680870	+	3'UTR	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOF	9381	broad.mit.edu	37	2	26689581	26689581	+	Splice_Site	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOR	56914	broad.mit.edu	37	20	16729471	16729471	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OTOR	56914	broad.mit.edu	37	20	16729471	16729471	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29583861	29583861	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
OVCH1	341350	broad.mit.edu	37	12	29583861	29583861	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY14	9934	broad.mit.edu	37	3	150931005	150931005	+	3'UTR	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
P2RY14	9934	broad.mit.edu	37	3	150931005	150931005	+	3'UTR	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS1	55690	broad.mit.edu	37	11	65988115	65988115	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PACS1	55690	broad.mit.edu	37	11	65988115	65988115	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI2	11240	broad.mit.edu	37	1	17410262	17410262	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PADI2	11240	broad.mit.edu	37	1	17410262	17410262	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAEP	5047	broad.mit.edu	37	9	138454470	138454470	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAEP	5047	broad.mit.edu	37	9	138454470	138454470	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK4	10298	broad.mit.edu	37	19	39660361	39660361	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK4	10298	broad.mit.edu	37	19	39660361	39660361	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK6	56924	broad.mit.edu	37	15	40565945	40565945	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAK6	56924	broad.mit.edu	37	15	40565945	40565945	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAMR1	25891	broad.mit.edu	37	11	35515796	35515796	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PAMR1	25891	broad.mit.edu	37	11	35515796	35515796	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP4	143	broad.mit.edu	37	13	25060347	25060347	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PARP4	143	broad.mit.edu	37	13	25060347	25060347	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBX1	5087	broad.mit.edu	37	1	164789369	164789369	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PBX1	5087	broad.mit.edu	37	1	164789369	164789369	+	Missense_Mutation	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB17	54661	broad.mit.edu	37	5	140537601	140537602	+	3'UTR	DNP	CC	AA	AA			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHB17	54661	broad.mit.edu	37	5	140537601	140537602	+	3'UTR	DNP	CC	AA	AA			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA6	56109	broad.mit.edu	37	5	140753949	140753949	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCDHGA6	56109	broad.mit.edu	37	5	140753949	140753949	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82583854	82583854	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCLO	27445	broad.mit.edu	37	7	82583854	82583854	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNX	22990	broad.mit.edu	37	14	71576295	71576295	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCNX	22990	broad.mit.edu	37	14	71576295	71576295	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78601129	78601129	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PCSK5	5125	broad.mit.edu	37	9	78601129	78601129	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD1LG2	80380	broad.mit.edu	37	9	5534764	5534764	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDCD1LG2	80380	broad.mit.edu	37	9	5534764	5534764	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178528660	178528660	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE11A	50940	broad.mit.edu	37	2	178528660	178528660	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20522824	20522824	+	Silent	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20799381	20799382	+	Intron	INS	-	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20522824	20522824	+	Silent	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3A	5139	broad.mit.edu	37	12	20799381	20799382	+	Intron	INS	-	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3B	5140	broad.mit.edu	37	11	14695269	14695269	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PDE3B	5140	broad.mit.edu	37	11	14695269	14695269	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER2	8864	broad.mit.edu	37	2	239164624	239164624	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PER2	8864	broad.mit.edu	37	2	239164624	239164624	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB1	23187	broad.mit.edu	37	11	118498623	118498623	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PHLDB1	23187	broad.mit.edu	37	11	118498623	118498623	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21068880	21068880	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KA	5297	broad.mit.edu	37	22	21068880	21068880	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151274490	151274490	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PI4KB	5298	broad.mit.edu	37	1	151274490	151274490	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2B	5287	broad.mit.edu	37	1	204410551	204410551	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIK3C2B	5287	broad.mit.edu	37	1	204410551	204410551	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1A	8394	broad.mit.edu	37	1	151219439	151219439	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PIP5K1A	8394	broad.mit.edu	37	1	151219439	151219439	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PKD1L1	168507	broad.mit.edu	37	7	47913441	47913441	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLBD2	196463	broad.mit.edu	37	12	113812724	113812724	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLBD2	196463	broad.mit.edu	37	12	113812724	113812724	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9459613	9459613	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLCB4	5332	broad.mit.edu	37	20	9459613	9459613	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD2	5338	broad.mit.edu	37	17	4713016	4713016	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLD2	5338	broad.mit.edu	37	17	4713016	4713016	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLDN	26258	broad.mit.edu	37	15	45897768	45897768	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA9	51054	broad.mit.edu	37	12	45566945	45566945	+	3'UTR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLEKHA9	51054	broad.mit.edu	37	12	45566945	45566945	+	3'UTR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	132169704	132169704	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PLXNA4	91584	broad.mit.edu	37	7	132169704	132169704	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA1	285848	broad.mit.edu	37	6	36274107	36274107	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA1	285848	broad.mit.edu	37	6	36274107	36274107	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA7	375775	broad.mit.edu	37	9	140389498	140389498	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PNPLA7	375775	broad.mit.edu	37	9	140389498	140389498	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PODXL	5420	broad.mit.edu	37	7	131193655	131193655	+	Intron	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PODXL	5420	broad.mit.edu	37	7	131193655	131193655	+	Intron	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38143960	38143960	+	Splice_Site	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POSTN	10631	broad.mit.edu	37	13	38143960	38143960	+	Splice_Site	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124503540	124503540	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124510993	124510993	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124503540	124503540	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POT1	25913	broad.mit.edu	37	7	124510993	124510993	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130872806	130872806	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130877748	130877748	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130872806	130872806	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
POTEF	728378	broad.mit.edu	37	2	130877748	130877748	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAP2B	8613	broad.mit.edu	37	1	57044798	57044798	+	Intron	SNP	C	A	A	rs146636536	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPAP2B	8613	broad.mit.edu	37	1	57044798	57044798	+	Intron	SNP	C	A	A	rs146636536	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1A	10891	broad.mit.edu	37	4	23826015	23826015	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPARGC1A	10891	broad.mit.edu	37	4	23826015	23826015	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1E	22843	broad.mit.edu	37	17	57050271	57050271	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPM1E	22843	broad.mit.edu	37	17	57050271	57050271	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3A	5506	broad.mit.edu	37	7	113518073	113518073	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PPP1R3A	5506	broad.mit.edu	37	7	113518073	113518073	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF2	65122	broad.mit.edu	37	1	12918928	12918928	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRAMEF2	65122	broad.mit.edu	37	1	12918928	12918928	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRELP	5549	broad.mit.edu	37	1	203453067	203453067	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRELP	5549	broad.mit.edu	37	1	203453067	203453067	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF40A	55660	broad.mit.edu	37	2	153535966	153535966	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRPF40A	55660	broad.mit.edu	37	2	153535966	153535966	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR5-ARHGAP8	553158	broad.mit.edu	37	22	45197947	45197947	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRR5-ARHGAP8	553158	broad.mit.edu	37	22	45197947	45197947	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79321909	79321909	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PRUNE2	158471	broad.mit.edu	37	9	79321909	79321909	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG3	5671	broad.mit.edu	37	19	43227993	43227993	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG3	5671	broad.mit.edu	37	19	43227993	43227993	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG5	5673	broad.mit.edu	37	19	43674428	43674428	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG5	5673	broad.mit.edu	37	19	43674428	43674428	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43523265	43523265	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSG6	5675	broad.mit.edu	37	19	43523265	43523265	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSPH	5723	broad.mit.edu	37	7	56087349	56087349	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSPH	5723	broad.mit.edu	37	7	56087351	56087351	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSPH	5723	broad.mit.edu	37	7	56087349	56087349	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PSPH	5723	broad.mit.edu	37	7	56087351	56087351	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTAFR	5724	broad.mit.edu	37	1	28477276	28477276	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTAFR	5724	broad.mit.edu	37	1	28477276	28477276	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11579720	11579720	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11579722	11579722	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11579720	11579720	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTCHD2	57540	broad.mit.edu	37	1	11579722	11579722	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS2	81490	broad.mit.edu	37	11	473830	473830	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTDSS2	81490	broad.mit.edu	37	11	473830	473830	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141753495	141753495	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTK2	5747	broad.mit.edu	37	8	141753495	141753495	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18765712	18765712	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN5	84867	broad.mit.edu	37	11	18765712	18765712	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPN9	5780	broad.mit.edu	37	15	75816478	75816478	+	Intron	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRA	5786	broad.mit.edu	37	20	3018722	3018722	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRA	5786	broad.mit.edu	37	20	3018722	3018722	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8317961	8317961	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8341992	8341992	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8465644	8465644	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8317961	8317961	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8341992	8341992	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRD	5789	broad.mit.edu	37	9	8465644	8465644	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRO	5800	broad.mit.edu	37	12	15747894	15747894	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRO	5800	broad.mit.edu	37	12	15747894	15747894	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121623626	121623626	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121674320	121674320	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121623626	121623626	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PTPRZ1	5803	broad.mit.edu	37	7	121674320	121674320	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM1	9698	broad.mit.edu	37	1	31426788	31426788	+	Silent	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PUM1	9698	broad.mit.edu	37	1	31426788	31426788	+	Silent	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWP1	11137	broad.mit.edu	37	12	108086637	108086637	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PWP1	11137	broad.mit.edu	37	12	108086637	108086637	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52325734	52325734	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PXDNL	137902	broad.mit.edu	37	8	52325734	52325734	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYROXD1	79912	broad.mit.edu	37	12	21621372	21621372	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
PYROXD1	79912	broad.mit.edu	37	12	21621372	21621372	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRFPR	84109	broad.mit.edu	37	4	122290735	122290735	+	Intron	SNP	G	C	C	rs143638179	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRFPR	84109	broad.mit.edu	37	4	122290735	122290735	+	Intron	SNP	G	C	C	rs143638179	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH2	84074	broad.mit.edu	37	17	74288678	74288678	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
QRICH2	84074	broad.mit.edu	37	17	74288678	74288678	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB38	23682	broad.mit.edu	37	11	87847169	87847169	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB38	23682	broad.mit.edu	37	11	87847169	87847169	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB4A	5867	broad.mit.edu	37	1	229438646	229438646	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAB4A	5867	broad.mit.edu	37	1	229438646	229438646	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGGTB	5876	broad.mit.edu	37	1	76253183	76253183	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RABGGTB	5876	broad.mit.edu	37	1	76253183	76253183	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI2	10742	broad.mit.edu	37	X	17818841	17818842	+	Missense_Mutation	DNP	CA	AT	AT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RAI2	10742	broad.mit.edu	37	X	17818841	17818842	+	Missense_Mutation	DNP	CA	AT	AT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RARRES3	5920	broad.mit.edu	37	11	63306891	63306891	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL1	8437	broad.mit.edu	37	12	113557022	113557022	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASAL1	8437	broad.mit.edu	37	12	113557022	113557022	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRP3	25780	broad.mit.edu	37	2	33745579	33745579	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASGRP3	25780	broad.mit.edu	37	2	33745579	33745579	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASIP1	54922	broad.mit.edu	37	19	49243435	49243435	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RASIP1	54922	broad.mit.edu	37	19	49243435	49243435	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP4	5950	broad.mit.edu	37	10	95351677	95351677	+	3'UTR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RBP4	5950	broad.mit.edu	37	10	95351677	95351677	+	3'UTR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REC8	9985	broad.mit.edu	37	14	24648811	24648811	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REC8	9985	broad.mit.edu	37	14	24648811	24648811	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECQL5	9400	broad.mit.edu	37	17	73656959	73656959	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RECQL5	9400	broad.mit.edu	37	17	73656959	73656959	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
REEP5	7905	broad.mit.edu	37	5	112214482	112214482	+	3'UTR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGAG1	57529	broad.mit.edu	37	X	109697657	109697657	+	Missense_Mutation	SNP	G	T	T	rs34064910	byFrequency	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGAG1	57529	broad.mit.edu	37	X	109697657	109697657	+	Missense_Mutation	SNP	G	T	T	rs34064910	byFrequency	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS11	8786	broad.mit.edu	37	16	323670	323670	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS11	8786	broad.mit.edu	37	16	323670	323670	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS4	5999	broad.mit.edu	37	1	163042127	163042127	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RGS4	5999	broad.mit.edu	37	1	163042127	163042127	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHAG	6005	broad.mit.edu	37	6	49586929	49586929	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHAG	6005	broad.mit.edu	37	6	49586929	49586929	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBG	57127	broad.mit.edu	37	1	156351336	156351336	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RHBG	57127	broad.mit.edu	37	1	156351336	156351336	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130926762	130926762	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RIMBP2	23504	broad.mit.edu	37	12	130926762	130926762	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF180	285671	broad.mit.edu	37	5	63510426	63510426	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF180	285671	broad.mit.edu	37	5	63510426	63510426	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF40	9810	broad.mit.edu	37	16	30776605	30776605	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RNF40	9810	broad.mit.edu	37	16	30776605	30776605	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10468155	10468155	+	Silent	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RP1L1	94137	broad.mit.edu	37	8	10468155	10468155	+	Silent	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPE65	6121	broad.mit.edu	37	1	68912330	68912330	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RPE65	6121	broad.mit.edu	37	1	68912330	68912330	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RQCD1	9125	broad.mit.edu	37	2	219457014	219457014	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RQCD1	9125	broad.mit.edu	37	2	219457014	219457014	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP12	23223	broad.mit.edu	37	10	99144970	99144970	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RRP12	23223	broad.mit.edu	37	10	99144970	99144970	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP1	59350	broad.mit.edu	37	4	159568062	159568062	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
RXFP1	59350	broad.mit.edu	37	4	159568062	159568062	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51173276	51173276	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SALL1	6299	broad.mit.edu	37	16	51173276	51173276	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9	54809	broad.mit.edu	37	7	92733294	92733294	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAMD9	54809	broad.mit.edu	37	7	92733294	92733294	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SAR1B	51128	broad.mit.edu	37	5	133948372	133948372	+	Intron	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARA5	286133	broad.mit.edu	37	8	27737266	27737266	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCARA5	286133	broad.mit.edu	37	8	27737266	27737266	+	Missense_Mutation	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCGB1D4	404552	broad.mit.edu	37	11	62063945	62063945	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCGB1D4	404552	broad.mit.edu	37	11	62063945	62063945	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3B	55800	broad.mit.edu	37	11	123513202	123513202	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SCN3B	55800	broad.mit.edu	37	11	123513202	123513202	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71410748	71410748	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SDK2	54549	broad.mit.edu	37	17	71410748	71410748	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELL	6402	broad.mit.edu	37	1	169670773	169670773	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SELL	6402	broad.mit.edu	37	1	169670773	169670773	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83636733	83636733	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SEMA3A	10371	broad.mit.edu	37	7	83636733	83636733	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA4	5267	broad.mit.edu	37	14	95034407	95034407	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINA4	5267	broad.mit.edu	37	14	95034407	95034407	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE1	5054	broad.mit.edu	37	7	100774963	100774963	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPINE1	5054	broad.mit.edu	37	7	100774963	100774963	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPING1	710	broad.mit.edu	37	11	57381888	57381888	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SERPING1	710	broad.mit.edu	37	11	57381888	57381888	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SF3B1	23451	broad.mit.edu	37	2	198257674	198257674	+	Intron	DEL	A	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPA2	729238	broad.mit.edu	37	10	81317784	81317784	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SFTPA2	729238	broad.mit.edu	37	10	81317784	81317784	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC14	100049587	broad.mit.edu	37	19	52149086	52149086	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC14	100049587	broad.mit.edu	37	19	52149086	52149086	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC7	27036	broad.mit.edu	37	19	51648281	51648281	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC7	27036	broad.mit.edu	37	19	51648281	51648281	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51960764	51960764	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIGLEC8	27181	broad.mit.edu	37	19	51960764	51960764	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L3	23094	broad.mit.edu	37	19	38621383	38621383	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIPA1L3	23094	broad.mit.edu	37	19	38621383	38621383	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPG	55423	broad.mit.edu	37	20	1617081	1617081	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SIRPG	55423	broad.mit.edu	37	20	1617081	1617081	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF1	6504	broad.mit.edu	37	1	160593832	160593832	+	Intron	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF1	6504	broad.mit.edu	37	1	160593832	160593832	+	Intron	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF6	114836	broad.mit.edu	37	1	160460756	160460756	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLAMF6	114836	broad.mit.edu	37	1	160460756	160460756	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A8	9376	broad.mit.edu	37	11	62763345	62763345	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC22A8	9376	broad.mit.edu	37	11	62763345	62763345	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC23A1	9963	broad.mit.edu	37	5	138713677	138713677	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC23A1	9963	broad.mit.edu	37	5	138713677	138713677	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107427872	107427872	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC26A3	1811	broad.mit.edu	37	7	107427872	107427872	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75862325	75862325	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC44A5	204962	broad.mit.edu	37	1	75862325	75862325	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC47A2	146802	broad.mit.edu	37	17	19611069	19611069	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42334989	42334989	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42340241	42340241	+	5'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42334989	42334989	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC4A1	6521	broad.mit.edu	37	17	42340241	42340241	+	5'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108618444	108618444	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC5A7	60482	broad.mit.edu	37	2	108618444	108618444	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A17	388662	broad.mit.edu	37	1	110719235	110719235	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC6A17	388662	broad.mit.edu	37	1	110719235	110719235	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A11	284525	broad.mit.edu	37	1	173493226	173493226	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLC9A11	284525	broad.mit.edu	37	1	173493226	173493226	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2A1	6578	broad.mit.edu	37	3	133667639	133667639	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2A1	6578	broad.mit.edu	37	3	133667639	133667639	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2B1	11309	broad.mit.edu	37	11	74876920	74876920	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLCO2B1	11309	broad.mit.edu	37	11	74876920	74876920	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFNL1	200172	broad.mit.edu	37	1	41486066	41486066	+	Silent	SNP	C	G	G	rs148645268		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLFNL1	200172	broad.mit.edu	37	1	41486066	41486066	+	Silent	SNP	C	G	G	rs148645268		TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98778813	98778813	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98799743	98799743	+	Splice_Site	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98778813	98778813	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLIT1	6585	broad.mit.edu	37	10	98799743	98799743	+	Splice_Site	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK5	26050	broad.mit.edu	37	13	88329776	88329776	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SLITRK5	26050	broad.mit.edu	37	13	88329776	88329776	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-16	767594	broad.mit.edu	37	14	101439105	101439105	+	5'Flank	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD114-16	767594	broad.mit.edu	37	14	101439105	101439105	+	5'Flank	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-16	100033454	broad.mit.edu	37	15	25444453	25444453	+	5'Flank	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNORD115-16	100033454	broad.mit.edu	37	15	25444453	25444453	+	5'Flank	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP35	11066	broad.mit.edu	37	12	123950105	123950105	+	Silent	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNRNP35	11066	broad.mit.edu	37	12	123950105	123950105	+	Silent	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX18	112574	broad.mit.edu	37	5	53815085	53815085	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SNX18	112574	broad.mit.edu	37	5	53815085	53815085	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108448049	108448049	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108536224	108536224	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108448049	108448049	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS1	114815	broad.mit.edu	37	10	108536224	108536224	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106961056	106961056	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SORCS3	22986	broad.mit.edu	37	10	106961056	106961056	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16505961	16505961	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SOX6	55553	broad.mit.edu	37	11	16505961	16505961	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	214878866	214878866	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPAG16	79582	broad.mit.edu	37	2	214878866	214878866	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35753776	35753776	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPEF2	79925	broad.mit.edu	37	5	35753776	35753776	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHK1	8877	broad.mit.edu	37	17	74383634	74383634	+	Silent	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPHK1	8877	broad.mit.edu	37	17	74383634	74383634	+	Silent	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPNS1	83985	broad.mit.edu	37	16	28990742	28990742	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPNS1	83985	broad.mit.edu	37	16	28990742	28990742	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR3	6707	broad.mit.edu	37	1	152975939	152975939	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPRR3	6707	broad.mit.edu	37	1	152975939	152975939	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158592830	158592830	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTA1	6708	broad.mit.edu	37	1	158592830	158592830	+	Silent	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN4	57731	broad.mit.edu	37	19	41063082	41063082	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SPTBN4	57731	broad.mit.edu	37	19	41063082	41063082	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRT	51593	broad.mit.edu	37	7	100483442	100483442	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SRRT	51593	broad.mit.edu	37	7	100483442	100483442	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX8	280659	broad.mit.edu	37	X	52657355	52657356	+	Intron	DEL	CC	-	-	rs150113654	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SSX8	280659	broad.mit.edu	37	X	52657355	52657356	+	Intron	DEL	CC	-	-	rs150113654	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA1	6489	broad.mit.edu	37	12	22439496	22439496	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ST8SIA1	6489	broad.mit.edu	37	12	22439496	22439496	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STAB1	23166	broad.mit.edu	37	3	52537139	52537139	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STEAP4	79689	broad.mit.edu	37	7	87912579	87912579	+	Intron	SNP	C	A	A	rs112845673	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STEAP4	79689	broad.mit.edu	37	7	87912579	87912579	+	Intron	SNP	C	A	A	rs112845673	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK11	6794	broad.mit.edu	37	19	1220721	1220721	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK11	6794	broad.mit.edu	37	19	1220721	1220721	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK33	65975	broad.mit.edu	37	11	8494590	8494590	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
STK33	65975	broad.mit.edu	37	11	8494590	8494590	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUMO3	6612	broad.mit.edu	37	21	46229076	46229076	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUMO3	6612	broad.mit.edu	37	21	46229076	46229076	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SURF6	6838	broad.mit.edu	37	9	136202824	136202824	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SURF6	6838	broad.mit.edu	37	9	136202824	136202824	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD4	55061	broad.mit.edu	37	1	223465689	223465689	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SUSD4	55061	broad.mit.edu	37	1	223465689	223465689	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT3	84258	broad.mit.edu	37	19	51135639	51135639	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
SYT3	84258	broad.mit.edu	37	19	51135639	51135639	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAC1	6863	broad.mit.edu	37	7	97362026	97362026	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TAC1	6863	broad.mit.edu	37	7	97362026	97362026	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D7	51256	broad.mit.edu	37	6	13316797	13316797	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBC1D7	51256	broad.mit.edu	37	6	13316797	13316797	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBR1	10716	broad.mit.edu	37	2	162274296	162274296	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TBR1	10716	broad.mit.edu	37	2	162274296	162274296	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB1	6921	broad.mit.edu	37	8	74868104	74868104	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCEB1	6921	broad.mit.edu	37	8	74868104	74868104	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCERG1L	256536	broad.mit.edu	37	10	132891506	132891506	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TCERG1L	256536	broad.mit.edu	37	10	132891506	132891506	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECPR1	25851	broad.mit.edu	37	7	97852406	97852406	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TECPR1	25851	broad.mit.edu	37	7	97852406	97852406	+	Nonsense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEK	7010	broad.mit.edu	37	9	27172593	27172593	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TEK	7010	broad.mit.edu	37	9	27172593	27172593	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53457304	53457304	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TENC1	23371	broad.mit.edu	37	12	53457304	53457304	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB2	7042	broad.mit.edu	37	1	218607527	218607527	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGFB2	7042	broad.mit.edu	37	1	218607527	218607527	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGIF2LX	90316	broad.mit.edu	37	X	89177129	89177129	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGIF2LX	90316	broad.mit.edu	37	X	89177129	89177129	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44948497	44948497	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TGM4	7047	broad.mit.edu	37	3	44948497	44948497	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THUMPD1	55623	broad.mit.edu	37	16	20748556	20748556	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
THUMPD1	55623	broad.mit.edu	37	16	20748556	20748556	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63132786	63132786	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TLN2	83660	broad.mit.edu	37	15	63132786	63132786	+	Missense_Mutation	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO3	55002	broad.mit.edu	37	13	114193696	114193696	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO3	55002	broad.mit.edu	37	13	114193696	114193696	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	69074247	69074247	+	Missense_Mutation	SNP	G	C	C	rs115929607	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMCO7	79613	broad.mit.edu	37	16	69074247	69074247	+	Missense_Mutation	SNP	G	C	C	rs115929607	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM27	57393	broad.mit.edu	37	X	15657907	15657907	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM27	57393	broad.mit.edu	37	X	15657907	15657907	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM63A	9725	broad.mit.edu	37	1	226041437	226041437	+	Missense_Mutation	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM67	91147	broad.mit.edu	37	8	94811991	94811992	+	Intron	DNP	GG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMEM67	91147	broad.mit.edu	37	8	94811991	94811992	+	Intron	DNP	GG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68919562	68919562	+	3'UTR	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMPRSS11F	389208	broad.mit.edu	37	4	68919562	68919562	+	3'UTR	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29670372	29670372	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TMTC1	83857	broad.mit.edu	37	12	29670372	29670372	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP3A	7156	broad.mit.edu	37	17	18196026	18196026	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TOP3A	7156	broad.mit.edu	37	17	18196026	18196026	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7574034	7574034	+	Splice_Site	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TP53	7157	broad.mit.edu	37	17	7574034	7574034	+	Splice_Site	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TPP2	7174	broad.mit.edu	37	13	103307411	103307411	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM21	6737	broad.mit.edu	37	11	4410993	4410993	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIM21	6737	broad.mit.edu	37	11	4410993	4410993	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP13	9319	broad.mit.edu	37	5	908506	908506	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRIP13	9319	broad.mit.edu	37	5	908506	908506	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73461256	73461256	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM3	80036	broad.mit.edu	37	9	73461256	73461256	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM5	29850	broad.mit.edu	37	11	2433235	2433235	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPM5	29850	broad.mit.edu	37	11	2433235	2433235	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV2	51393	broad.mit.edu	37	17	16320923	16320923	+	5'UTR	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRPV2	51393	broad.mit.edu	37	17	16320923	16320923	+	5'UTR	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98602082	98602082	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRRAP	8295	broad.mit.edu	37	7	98602082	98602082	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRUB1	142940	broad.mit.edu	37	10	116698036	116698036	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TRUB1	142940	broad.mit.edu	37	10	116698036	116698036	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179534523	179534523	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TTN	7273	broad.mit.edu	37	2	179534523	179534523	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB8	347688	broad.mit.edu	37	10	93408	93408	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
TUBB8	347688	broad.mit.edu	37	10	93408	93408	+	Silent	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2D2	7322	broad.mit.edu	37	5	138994325	138994325	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2D2	7322	broad.mit.edu	37	5	138994325	138994325	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2Q2P1	388165	broad.mit.edu	37	15	85070914	85070914	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE2Q2P1	388165	broad.mit.edu	37	15	85070914	85070914	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	157000138	157000138	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBE3C	9690	broad.mit.edu	37	7	157000138	157000138	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN3	50613	broad.mit.edu	37	11	5530683	5530683	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBQLN3	50613	broad.mit.edu	37	11	5530683	5530683	+	Missense_Mutation	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19449430	19449430	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBR4	23352	broad.mit.edu	37	1	19449430	19449430	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN7	26043	broad.mit.edu	37	3	196089416	196089416	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UBXN7	26043	broad.mit.edu	37	3	196089416	196089416	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT2	55757	broad.mit.edu	37	13	96648274	96648274	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGGT2	55757	broad.mit.edu	37	13	96648274	96648274	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B7	7364	broad.mit.edu	37	4	69962328	69962328	+	Silent	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UGT2B7	7364	broad.mit.edu	37	4	69962328	69962328	+	Silent	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC119B	84747	broad.mit.edu	37	12	121157681	121157681	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC119B	84747	broad.mit.edu	37	12	121157681	121157681	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96141060	96141060	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
UNC5C	8633	broad.mit.edu	37	4	96141060	96141060	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH1C	10083	broad.mit.edu	37	11	17517185	17517185	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH1C	10083	broad.mit.edu	37	11	17517185	17517185	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216424377	216424377	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USH2A	7399	broad.mit.edu	37	1	216424377	216424377	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP32	84669	broad.mit.edu	37	17	58289532	58289533	+	Intron	INS	-	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP44	84101	broad.mit.edu	37	12	95927532	95927532	+	Silent	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
USP44	84101	broad.mit.edu	37	12	95927532	95927532	+	Silent	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	125752099	125752099	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	31006018	31006019	+	IGR	DNP	GG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	50979954	50979954	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	90636447	90636447	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18932522	18932522	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49104252	49104252	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	5058473	5058473	+	IGR	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	64216397	64216397	+	IGR	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80726875	80726875	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59103464	59103464	+	IGR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	79483276	79483276	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	90014930	90014930	+	IGR	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19807213	19807213	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20146428	20146428	+	IGR	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	29142702	29142702	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102369269	102369269	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21140304	21140304	+	IGR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22013137	22013137	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22567006	22567006	+	IGR	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22788996	22788996	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	23265509	23265509	+	IGR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84944563	84944563	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32178384	32178384	+	IGR	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32621128	32621128	+	IGR	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32914966	32914966	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34641735	34641735	+	IGR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	51680060	51680060	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52031707	52031707	+	IGR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	60083494	60083494	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	33852152	33852152	+	IGR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	44977110	44977110	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	57687174	57687174	+	IGR	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	149038826	149038826	+	IGR	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	219783257	219783257	+	IGR	SNP	A	G	G	rs145602795	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	25451867	25451867	+	IGR	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	50871642	50871642	+	IGR	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79520671	79520671	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10900007	10900007	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16914292	16914292	+	IGR	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131051961	131051961	+	IGR	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	139064959	139064959	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	146583828	146583828	+	IGR	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	184472521	184472521	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	219706628	219706629	+	IGR	DNP	CC	AA	AA			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49510117	49510117	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90464802	90464802	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91872878	91872878	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91888449	91888449	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	92145363	92145363	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	178211508	178211508	+	IGR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	192874668	192874668	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75263759	75263759	+	IGR	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87100446	87100446	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96387343	96387343	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	118496865	118496865	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	171525940	171525940	+	IGR	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	74804784	74804784	+	IGR	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	89448953	89448953	+	IGR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	126479541	126479541	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15451285	15451285	+	IGR	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	112683583	112683583	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	30664997	30664997	+	IGR	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	10492819	10492819	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	118591169	118591169	+	IGR	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	135947660	135947660	+	IGR	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	138125836	138125836	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63353546	63353546	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63354260	63354261	+	IGR	DNP	GG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	20791943	20791943	+	IGR	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	48114428	48114428	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	103493945	103493945	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109484969	109484969	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29826495	29826495	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84672550	84672550	+	IGR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84673790	84673790	+	IGR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	89699775	89699775	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108812065	108812065	+	IGR	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	153106874	153106874	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48634935	48634935	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	49432101	49432101	+	IGR	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99406182	99406182	+	IGR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99410950	99410950	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	125752099	125752099	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	31006018	31006019	+	IGR	DNP	GG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	50979954	50979954	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	90636447	90636447	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	18932522	18932522	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	49104252	49104252	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	5058473	5058473	+	IGR	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	64216397	64216397	+	IGR	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	12	80726875	80726875	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	59103464	59103464	+	IGR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	79483276	79483276	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	90014930	90014930	+	IGR	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	19807213	19807213	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	20146428	20146428	+	IGR	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	14	29142702	29142702	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	102369269	102369269	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	21140304	21140304	+	IGR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22013137	22013137	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22567006	22567006	+	IGR	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	22788996	22788996	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	23265509	23265509	+	IGR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	84944563	84944563	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32178384	32178384	+	IGR	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32621128	32621128	+	IGR	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	32914966	32914966	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34641735	34641735	+	IGR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	51680060	51680060	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	17	52031707	52031707	+	IGR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	18	60083494	60083494	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	33852152	33852152	+	IGR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	44977110	44977110	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	19	57687174	57687174	+	IGR	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	219783257	219783257	+	IGR	SNP	A	G	G	rs145602795	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	25451867	25451867	+	IGR	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	50871642	50871642	+	IGR	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	79520671	79520671	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	21	10900007	10900007	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	22	16914292	16914292	+	IGR	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	131051961	131051961	+	IGR	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	139064959	139064959	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	146583828	146583828	+	IGR	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	184472521	184472521	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	219706628	219706629	+	IGR	DNP	CC	AA	AA			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	49510117	49510117	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90464802	90464802	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91872878	91872878	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	91888449	91888449	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	92145363	92145363	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	178211508	178211508	+	IGR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	192874668	192874668	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	75263759	75263759	+	IGR	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	87100446	87100446	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	96387343	96387343	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	118496865	118496865	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	171525940	171525940	+	IGR	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	74804784	74804784	+	IGR	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	4	89448953	89448953	+	IGR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	126479541	126479541	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	5	15451285	15451285	+	IGR	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	112683583	112683583	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	6	30664997	30664997	+	IGR	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	10492819	10492819	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	135947660	135947660	+	IGR	SNP	T	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	138125836	138125836	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	141587460	141587460	+	IGR	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	63354260	63354261	+	IGR	DNP	GG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	20791943	20791943	+	IGR	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	8	48114428	48114428	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	103493945	103493945	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	109484969	109484969	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	29826495	29826495	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84672550	84672550	+	IGR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	84673790	84673790	+	IGR	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	9	89699775	89699775	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	108812065	108812065	+	IGR	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	153106874	153106874	+	IGR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	48634935	48634935	+	IGR	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	49432101	49432101	+	IGR	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99406182	99406182	+	IGR	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	X	99410950	99410950	+	IGR	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219294032	219294032	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIL1	7429	broad.mit.edu	37	2	219294032	219294032	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIT	5212	broad.mit.edu	37	2	37032694	37032694	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VIT	5212	broad.mit.edu	37	2	37032694	37032694	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79933209	79933209	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VPS13A	23230	broad.mit.edu	37	9	79933209	79933209	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM1	284415	broad.mit.edu	37	19	54561905	54561905	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
VSTM1	284415	broad.mit.edu	37	19	54561905	54561905	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASL	8976	broad.mit.edu	37	7	123349179	123349179	+	Silent	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WASL	8976	broad.mit.edu	37	7	123349179	123349179	+	Silent	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR19	57728	broad.mit.edu	37	4	39245753	39245753	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR19	57728	broad.mit.edu	37	4	39247011	39247011	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR19	57728	broad.mit.edu	37	4	39245753	39245753	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR19	57728	broad.mit.edu	37	4	39247011	39247011	+	Frame_Shift_Del	DEL	C	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR92	116143	broad.mit.edu	37	2	68374755	68374755	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WDR92	116143	broad.mit.edu	37	2	68374755	68374755	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWP2	11060	broad.mit.edu	37	16	69964119	69964119	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
WWP2	11060	broad.mit.edu	37	16	69964119	69964119	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO5	57510	broad.mit.edu	37	6	43538667	43538667	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XPO5	57510	broad.mit.edu	37	6	43538667	43538667	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17235204	17235204	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17294435	17294435	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17235204	17235204	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
XYLT1	64131	broad.mit.edu	37	16	17294435	17294435	+	Missense_Mutation	SNP	A	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72822796	72822796	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFHX3	463	broad.mit.edu	37	16	72822796	72822796	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP37	7539	broad.mit.edu	37	9	115818720	115818720	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFP37	7539	broad.mit.edu	37	9	115818720	115818720	+	Intron	SNP	T	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE1	53349	broad.mit.edu	37	14	73490697	73490697	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZFYVE1	53349	broad.mit.edu	37	14	73490697	73490697	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIK1	284307	broad.mit.edu	37	19	58101972	58101972	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZIK1	284307	broad.mit.edu	37	19	58101972	58101972	+	Missense_Mutation	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22156079	22156079	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF208	7757	broad.mit.edu	37	19	22156079	22156079	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF211	10520	broad.mit.edu	37	19	58145375	58145375	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF211	10520	broad.mit.edu	37	19	58145375	58145375	+	Intron	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF292	23036	broad.mit.edu	37	6	87967002	87967002	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF292	23036	broad.mit.edu	37	6	87967002	87967002	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF347	84671	broad.mit.edu	37	19	53643937	53643937	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF347	84671	broad.mit.edu	37	19	53643937	53643937	+	Missense_Mutation	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188426	57188426	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF479	90827	broad.mit.edu	37	7	57188426	57188426	+	Missense_Mutation	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF534	147658	broad.mit.edu	37	19	52941035	52941035	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF534	147658	broad.mit.edu	37	19	52941035	52941035	+	Nonsense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF548	147694	broad.mit.edu	37	19	57910758	57910758	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF548	147694	broad.mit.edu	37	19	57910758	57910758	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF551	90233	broad.mit.edu	37	19	58196642	58196642	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF551	90233	broad.mit.edu	37	19	58196642	58196642	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF765	91661	broad.mit.edu	37	19	53905144	53905144	+	Intron	DEL	G	-	-			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF778	197320	broad.mit.edu	37	16	89293777	89293777	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF778	197320	broad.mit.edu	37	16	89293777	89293777	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF781	163115	broad.mit.edu	37	19	38184276	38184276	+	5'Flank	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF789	285989	broad.mit.edu	37	7	99074071	99074071	+	5'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF789	285989	broad.mit.edu	37	7	99074071	99074071	+	5'UTR	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF805	390980	broad.mit.edu	37	19	57765064	57765064	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF805	390980	broad.mit.edu	37	19	57765064	57765064	+	Nonsense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF828	283489	broad.mit.edu	37	13	115091623	115091623	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF828	283489	broad.mit.edu	37	13	115091623	115091623	+	Missense_Mutation	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57768948	57768948	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZNF831	128611	broad.mit.edu	37	20	57768948	57768948	+	Missense_Mutation	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB1	54764	broad.mit.edu	37	10	126655064	126655064	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZRANB1	54764	broad.mit.edu	37	10	126655064	126655064	+	Intron	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN20	7579	broad.mit.edu	37	1	33959006	33959006	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN20	7579	broad.mit.edu	37	1	33959006	33959006	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5B	342933	broad.mit.edu	37	19	56701647	56701647	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSCAN5B	342933	broad.mit.edu	37	19	56701647	56701647	+	Missense_Mutation	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187712478	187712479	+	Missense_Mutation	DNP	CG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
ZSWIM2	151112	broad.mit.edu	37	2	187712478	187712479	+	Missense_Mutation	DNP	CG	TT	TT			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134664738	134664738	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30932927	30932927	+	RNA	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	52035123	52035123	+	RNA	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25427385	25427385	+	RNA	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29405569	29405569	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34741044	34741044	+	5'Flank	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	142799740	142799740	+	Intron	SNP	G	C	C			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143210383	143210383	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143213054	143213054	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132294236	132294236	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186693008	186693008	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89246973	89246973	+	RNA	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89278502	89278502	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89292339	89292340	+	Intron	DNP	CC	TA	TA			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89309479	89309479	+	RNA	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90008216	90008216	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	3	22423167	22423167	+	5'Flank	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142032319	142032319	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142124244	142124244	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	148964254	148964255	+	RNA	DNP	GG	TT	TT	rs115295014	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-11A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	10	134664738	134664738	+	Silent	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	11	30932927	30932927	+	RNA	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	13	52035123	52035123	+	RNA	SNP	C	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	15	25427385	25427385	+	RNA	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	29405569	29405569	+	Intron	SNP	T	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	16	34741044	34741044	+	5'Flank	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143210383	143210383	+	Intron	SNP	C	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	1	143213054	143213054	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	132294236	132294236	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	186693008	186693008	+	Intron	SNP	C	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89246973	89246973	+	RNA	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89278502	89278502	+	Intron	SNP	A	G	G			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89292339	89292340	+	Intron	DNP	CC	TA	TA			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	89309479	89309479	+	RNA	SNP	A	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	2	90008216	90008216	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142032319	142032319	+	Intron	SNP	G	T	T			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	142124244	142124244	+	Intron	SNP	G	A	A			TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
Unknown	0	broad.mit.edu	37	7	148964254	148964255	+	RNA	DNP	GG	TT	TT	rs115295014	by1000genomes	TCGA-44-6145-01A-11D-1753-08	TCGA-44-6145-10A-01D-1753-08			NA	NA	NA	NA			Somatic	Phase_I	Capture	NA	NA	NA	Illumina GAIIx
