Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
IFI44	10561	broad.mit.edu	36	1	78888697	78888697	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	78888697	78888697	IFI44	1	A	A	G	8
KCNA3	3738	broad.mit.edu	36	1	111017919	111017919	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	111017919	111017919	KCNA3	1	C	C	T	31
IQGAP3	128239	broad.mit.edu	36	1	154770282	154770282	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	154770282	154770282	IQGAP3	1	C	C	A	30
SEC16B	89866	broad.mit.edu	36	1	176183693	176183693	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	176183693	176183693	SEC16B	1	C	C	G	30
GFRA1	2674	broad.mit.edu	36	10	117961132	117961132	+	Splice_Site_SNP	SNP	C	C	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10			C	A	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Splice_Site_SNP	SNP	117961132	117961132	GFRA1	10	C	C	A	18
C10orf137	26098	broad.mit.edu	36	10	127404246	127404246	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10			A	G	A	A	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	127404246	127404246	C10orf137	10	A	A	G	4
C10orf137	26098	broad.mit.edu	36	10	127426434	127426434	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	127426434	127426434	C10orf137	10	G	G	T	36
PTPN5	84867	broad.mit.edu	36	11	18710749	18710749	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10			G	A	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	18710749	18710749	PTPN5	11	G	G	A	40
FOLH1B	219595	broad.mit.edu	36	11	89048986	89048986	+	Splice_Site_SNP	SNP	T	T	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Splice_Site_SNP	SNP	89048986	89048986	FOLH1B	11	T	T	A	59
CASP1	834	broad.mit.edu	36	11	104406280	104406280	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10			T	A	T	T	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	104406280	104406280	CASP1	11	T	T	A	52
KRT72	140807	broad.mit.edu	36	12	51267845	51267845	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	51267845	51267845	KRT72	12	T	T	G	62
NR1H4	9971	broad.mit.edu	36	12	99428782	99428783	+	Missense_Mutation	DNP	CC	CC	AA	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	DNP	99428782	99428783	NR1H4	12	CC	CC	AA	18
ERCC5	2073	broad.mit.edu	36	13	102302613	102302613	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	102302613	102302613	ERCC5	13	G	G	T	43
SERPINA10	51156	broad.mit.edu	36	14	93826141	93826141	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	93826141	93826141	SERPINA10	14	T	T	G	49
AHNAK2	113146	broad.mit.edu	36	14	104489803	104489803	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	104489803	104489803	AHNAK2	14	T	T	C	49
ZNF48	197407	broad.mit.edu	36	16	30317288	30317288	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	30317288	30317288	ZNF48	16	C	C	G	32
CES7	221223	broad.mit.edu	36	16	54465369	54465369	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10			A	G	A	A	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	54465369	54465369	CES7	16	A	A	G	6
CHRNB1	1140	broad.mit.edu	36	17	7299354	7299354	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	7299354	7299354	CHRNB1	17	C	C	T	24
NF1	4763	broad.mit.edu	36	17	26678962	26678962	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10			G	C	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	26678962	26678962	NF1	17	G	G	C	42
WNK4	65266	broad.mit.edu	36	17	38201262	38201262	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	38201262	38201262	WNK4	17	C	C	G	32
LPIN2	9663	broad.mit.edu	36	18	2941130	2941130	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	2941130	2941130	LPIN2	18	C	C	G	24
PRX	57716	broad.mit.edu	36	19	45593631	45593631	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	45593631	45593631	PRX	19	G	G	A	38
SIGLEC12	89858	broad.mit.edu	36	19	56695389	56695389	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	56695389	56695389	SIGLEC12	19	C	C	A	22
NLRP11	204801	broad.mit.edu	36	19	60995521	60995521	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	60995521	60995521	NLRP11	19	G	G	A	40
ANTXR1	84168	broad.mit.edu	36	2	69151305	69151305	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	69151305	69151305	ANTXR1	2	G	G	C	33
ZAP70	7535	broad.mit.edu	36	2	97717433	97717433	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10			A	G	A	A	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	97717433	97717433	ZAP70	2	A	A	G	10
SF3B1	23451	broad.mit.edu	36	2	197966064	197966064	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	197966064	197966064	SF3B1	2	C	C	T	17
SH3BP4	23677	broad.mit.edu	36	2	235615920	235615920	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	235615920	235615920	SH3BP4	2	C	C	T	27
PPP6R2	9701	broad.mit.edu	36	22	49204738	49204738	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10			C	T	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Silent	SNP	49204738	49204738	PPP6R2	22	C	C	T	28
DNAH1	25981	broad.mit.edu	36	3	52332863	52332863	+	Splice_Site_SNP	SNP	G	G	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Splice_Site_SNP	SNP	52332863	52332863	DNAH1	3	G	G	A	35
ARGFX	503582	broad.mit.edu	36	3	122787591	122787591	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	122787591	122787591	ARGFX	3	G	G	T	33
ANXA5	308	broad.mit.edu	36	4	122812242	122812242	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	122812242	122812242	ANXA5	4	C	C	G	29
BAT3	7917	broad.mit.edu	36	6	31715337	31715337	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	31715337	31715337	BAT3	6	G	G	A	39
RXRB	6257	broad.mit.edu	36	6	33273584	33273584	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	33273584	33273584	RXRB	6	C	C	T	28
EFHC1	114327	broad.mit.edu	36	6	52437805	52437805	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	52437805	52437805	EFHC1	6	A	A	C	11
RIMS1	22999	broad.mit.edu	36	6	73165447	73165447	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	73165447	73165447	RIMS1	6	G	G	A	37
GRIK2	2898	broad.mit.edu	36	6	102589990	102589990	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	102589990	102589990	GRIK2	6	G	G	A	33
HACE1	57531	broad.mit.edu	36	6	105387659	105387659	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	105387659	105387659	HACE1	6	G	G	A	42
SBDS	51119	broad.mit.edu	36	7	66093671	66093671	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10			T	A	T	T	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	66093671	66093671	SBDS	7	T	T	A	59
ATP5J2	9551	broad.mit.edu	36	7	98895697	98895697	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10			C	G	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	98895697	98895697	ATP5J2	7	C	C	G	30
GPR37	2861	broad.mit.edu	36	7	124191244	124191244	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	124191244	124191244	GPR37	7	C	C	G	24
KIAA1147	57189	broad.mit.edu	36	7	141010468	141010468	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	141010468	141010468	KIAA1147	7	T	T	C	60
COL22A1	169044	broad.mit.edu	36	8	139766688	139766688	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1027-01	TCGA-23-1027-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	139766688	139766688	COL22A1	8	T	T	C	50
