Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
PADI6	353238	broad.mit.edu	36	1	17594100	17594100	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	17594100	17594100	PADI6	1	G	G	A	39
MRTO4	51154	broad.mit.edu	36	1	19457617	19457617	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	19457617	19457617	MRTO4	1	G	G	A	33
CNKSR1	10256	broad.mit.edu	36	1	26387314	26387314	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	26387314	26387314	CNKSR1	1	G	G	A	47
FABP3	2170	broad.mit.edu	36	1	31618404	31618404	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	31618404	31618404	FABP3	1	C	C	T	32
KIAA0754	643314	broad.mit.edu	36	1	39649926	39649926	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	39649926	39649926	KIAA0754	1	C	C	T	32
PAPPA2	60676	broad.mit.edu	36	1	174931550	174931550	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	174931550	174931550	PAPPA2	1	A	A	G	16
LAMC1	3915	broad.mit.edu	36	1	181378499	181378499	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10			A	C	A	A	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	181378499	181378499	LAMC1	1	A	A	C	3
OR2M5	127059	broad.mit.edu	36	1	246375162	246375162	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	246375162	246375162	OR2M5	1	G	G	T	47
ZNF488	118738	broad.mit.edu	36	10	47991539	47991539	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	47991539	47991539	ZNF488	10	G	G	A	39
ARID5B	84159	broad.mit.edu	36	10	63522471	63522471	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	63522471	63522471	ARID5B	10	G	G	C	48
ZNF365	22891	broad.mit.edu	36	10	63806538	63806538	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	63806538	63806538	ZNF365	10	C	C	A	20
KIAA0913	23053	broad.mit.edu	36	10	75223938	75223938	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	75223938	75223938	KIAA0913	10	G	G	A	44
EMX2	2018	broad.mit.edu	36	10	119292944	119292944	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	119292944	119292944	EMX2	10	C	C	T	26
OR5L2	26338	broad.mit.edu	36	11	55352078	55352078	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	55352078	55352078	OR5L2	11	G	G	A	48
MMP8	4317	broad.mit.edu	36	11	102090553	102090553	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10			G	A	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Silent	SNP	102090553	102090553	MMP8	11	G	G	A	40
PRMT8	56341	broad.mit.edu	36	12	3529457	3529457	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	3529457	3529457	PRMT8	12	G	G	C	43
LTBR	4055	broad.mit.edu	36	12	6370101	6370101	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	6370101	6370101	LTBR	12	C	C	T	29
SLC22A17	51310	broad.mit.edu	36	14	22886663	22886663	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	22886663	22886663	SLC22A17	14	G	G	C	41
TTC7B	145567	broad.mit.edu	36	14	90266201	90266201	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	90266201	90266201	TTC7B	14	C	C	T	32
GJD2	57369	broad.mit.edu	36	15	32832807	32832807	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	32832807	32832807	GJD2	15	T	T	C	58
GNG13	51764	broad.mit.edu	36	16	789055	789055	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	789055	789055	GNG13	16	C	C	G	32
SLC12A4	6560	broad.mit.edu	36	16	66541876	66541876	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	66541876	66541876	SLC12A4	16	C	C	T	30
TBX2	6909	broad.mit.edu	36	17	56840454	56840454	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	56840454	56840454	TBX2	17	C	C	T	23
PRTN3	5657	broad.mit.edu	36	19	794898	794898	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	794898	794898	PRTN3	19	A	A	G	7
CPAMD8	27151	broad.mit.edu	36	19	16900019	16900019	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10			T	C	T	T	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	16900019	16900019	CPAMD8	19	T	T	C	52
ITPKC	80271	broad.mit.edu	36	19	45927036	45927036	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10			C	G	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	45927036	45927036	ITPKC	19	C	C	G	28
LMTK3	114783	broad.mit.edu	36	19	53692604	53692606	+	Missense_Mutation	TNP	GGG	GGG	TTT	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	TNP	53692604	53692606	LMTK3	19	GGG	GGG	TTT	39
GYS1	2997	broad.mit.edu	36	19	54180952	54180952	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	54180952	54180952	GYS1	19	G	G	A	39
NOSIP	51070	broad.mit.edu	36	19	54751492	54751492	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	54751492	54751492	NOSIP	19	C	C	T	22
PRMT1	3276	broad.mit.edu	36	19	54881708	54881708	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	54881708	54881708	PRMT1	19	G	G	A	39
NLRP5	126206	broad.mit.edu	36	19	61230630	61230630	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10			G	A	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	61230630	61230630	NLRP5	19	G	G	A	40
GREB1	9687	broad.mit.edu	36	2	11695386	11695386	+	Silent	SNP	C	C	T	rs34955282	byCluster;byFrequency	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	11695386	11695386	GREB1	2	C	C	T	28
DDX1	1653	broad.mit.edu	36	2	15677834	15677834	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	15677834	15677834	DDX1	2	G	G	A	37
KIF3C	3797	broad.mit.edu	36	2	26057982	26057982	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	26057982	26057982	KIF3C	2	C	C	T	32
ATP6V1E2	90423	broad.mit.edu	36	2	46592951	46592951	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10			C	T	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	46592951	46592951	ATP6V1E2	2	C	C	T	27
MARS2	92935	broad.mit.edu	36	2	198279444	198279444	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	198279444	198279444	MARS2	2	A	A	C	12
ALS2CR12	130540	broad.mit.edu	36	2	201917201	201917201	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	201917201	201917201	ALS2CR12	2	T	T	G	64
IRS1	3667	broad.mit.edu	36	2	227371331	227371332	+	Missense_Mutation	DNP	CC	CC	TT	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	DNP	227371331	227371332	IRS1	2	CC	CC	TT	30
KIF1A	547	broad.mit.edu	36	2	241333910	241333910	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	241333910	241333910	KIF1A	2	C	C	A	22
MC3R	4159	broad.mit.edu	36	20	54257451	54257451	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	54257451	54257451	MC3R	20	G	G	C	43
RBM38	55544	broad.mit.edu	36	20	55401144	55401144	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	55401144	55401144	RBM38	20	A	A	G	11
ZGPAT	84619	broad.mit.edu	36	20	61810792	61810792	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	61810792	61810792	ZGPAT	20	A	A	C	14
SAMD10	140700	broad.mit.edu	36	20	62077543	62077543	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	62077543	62077543	SAMD10	20	C	C	A	18
ENTHD1	150350	broad.mit.edu	36	22	38613693	38613693	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	38613693	38613693	ENTHD1	22	C	C	T	19
CHKB	1120	broad.mit.edu	36	22	49366845	49366845	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	49366845	49366845	CHKB	22	G	G	T	37
ZCWPW2	152098	broad.mit.edu	36	3	28429700	28429700	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	28429700	28429700	ZCWPW2	3	G	G	T	36
ROBO1	6091	broad.mit.edu	36	3	78732069	78732069	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10			A	T	A	A	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	78732069	78732069	ROBO1	3	A	A	T	12
CHST2	9435	broad.mit.edu	36	3	144323282	144323282	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	144323282	144323282	CHST2	3	G	G	A	42
MFSD7	84179	broad.mit.edu	36	4	670353	670353	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	670353	670353	MFSD7	4	A	A	C	7
HTRA3	94031	broad.mit.edu	36	4	8346768	8346768	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	8346768	8346768	HTRA3	4	G	G	A	46
C4orf35	85438	broad.mit.edu	36	4	71235583	71235583	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	71235583	71235583	C4orf35	4	G	G	C	45
PCDHA8	56140	broad.mit.edu	36	5	140202119	140202119	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	140202119	140202119	PCDHA8	5	A	A	C	1
PCDHB5	26167	broad.mit.edu	36	5	140496729	140496729	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	140496729	140496729	PCDHB5	5	G	G	A	42
C5orf45	51149	broad.mit.edu	36	5	179197288	179197288	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	179197288	179197288	C5orf45	5	T	T	A	63
SCML4	256380	broad.mit.edu	36	6	108148650	108148650	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	108148650	108148650	SCML4	6	G	G	A	47
IL20RA	53832	broad.mit.edu	36	6	137364605	137364605	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Nonsense_Mutation	SNP	137364605	137364605	IL20RA	6	C	C	T	21
PKD1L1	168507	broad.mit.edu	36	7	47845618	47845618	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	47845618	47845618	PKD1L1	7	C	C	T	27
TSPAN12	23554	broad.mit.edu	36	7	120216158	120216158	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	120216158	120216158	TSPAN12	7	C	C	T	29
CHCHD3	54927	broad.mit.edu	36	7	132359853	132359853	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	132359853	132359853	CHCHD3	7	G	G	C	45
CLCN1	1180	broad.mit.edu	36	7	142723566	142723566	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	142723566	142723566	CLCN1	7	C	C	T	23
NOS3	4846	broad.mit.edu	36	7	150338933	150338933	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	150338933	150338933	NOS3	7	C	C	G	22
SDC2	6383	broad.mit.edu	36	8	97689805	97689805	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	97689805	97689805	SDC2	8	G	G	A	37
COL22A1	169044	broad.mit.edu	36	8	139959187	139959187	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	139959187	139959187	COL22A1	8	G	G	A	39
PLEC	5339	broad.mit.edu	36	8	145064522	145064522	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	145064522	145064522	PLEC	8	G	G	A	41
GPR172A	79581	broad.mit.edu	36	8	145554466	145554466	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	145554466	145554466	GPR172A	8	G	G	T	38
FAM102A	399665	broad.mit.edu	36	9	129746965	129746965	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	129746965	129746965	FAM102A	9	G	G	A	35
TCEAL3	85012	broad.mit.edu	36	X	102750764	102750764	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	102750764	102750764	TCEAL3	23	A	A	T	11
IGSF1	3547	broad.mit.edu	36	X	130237644	130237644	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	130237644	130237644	IGSF1	23	G	G	A	45
TP53	7157	broad.mit.edu	36	17	7517871	7517881	+	Splice_Site_Del	DEL	TAGATTACCAC	TAGATTACCAC	-	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	Splice_Site_Del	DEL	7517871	7517881	TP53	17	TAGATTACCAC	TAGATTACCAC	-	57
COL9A2	1298	broad.mit.edu	36	1	40544415	40544432	+	In_Frame_Del	DEL	CCTCCTTTTGTCCCAGGC	-	CCTCCTTTTGTCCCAGGC	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	In_Frame_Del	DEL	40544415	40544432	COL9A2	1	CCTCCTTTTGTCCCAGGC	-	CCTCCTTTTGTCCCAGGC	26
PRG4	10216	broad.mit.edu	36	1	184543813	184543860	+	In_Frame_Del	DEL	GGACTGCTCCAACTACCCTCAAGGAACCTGCACCCACTACTCCCAAGA	-	GGACTGCTCCAACTACCCTCAAGGAACCTGCACCCACTACTCCCAAGA	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	In_Frame_Del	DEL	184543813	184543860	PRG4	1	GGACTGCTCCAACTACCCTCAAGGAACCTGCACCCACTACTCCCAAGA	-	GGACTGCTCCAACTACCCTCAAGGAACCTGCACCCACTACTCCCAAGA	43
C10orf140	387640	broad.mit.edu	36	10	21845472	21845473	+	In_Frame_Ins	INS	-	CCTCCT	-	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	In_Frame_Ins	INS	21845472	21845473	C10orf140	10	-	CCTCCT	-	22
FAM86B2	653333	broad.mit.edu	36	8	12335964	12335966	+	In_Frame_Del	DEL	CTG	-	CTG	novel	Unknown	TCGA-23-1116-01	TCGA-23-1116-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	In_Frame_Del	DEL	12335964	12335966	FAM86B2	8	CTG	-	CTG	32
