Extract Name	Hybridization Name	Data File	Comment [TCGA Archive Name]	Comment [TCGA Data Level]	Comment [TCGA Include for Analysis]	Protocol REF	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
TCGA-A7-A26J-10A-01D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C09_1347462	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C09_1347462.nocnv_hg19.seg.txt	broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2013.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg_2014051800	BRCA-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_BRCA-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.Level_3.2014051800.0.0	yes
TCGA-A7-A26E-10A-01D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_D01_1347374	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_D01_1347374.nocnv_hg19.seg.txt	broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2013.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg_2014051800	BRCA-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_BRCA-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.Level_3.2014051800.0.0	yes
TCGA-A7-A26J-01A-11D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C05_1347438	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C05_1347438.nocnv_hg19.seg.txt	broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2013.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg_2014051800	BRCA-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_BRCA-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.Level_3.2014051800.0.0	yes
TCGA-A7-A26E-01A-11D-A275-01	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C11_1347436	BEDEW_p_TCGA_FFPE_7_13_N_GenomeWideSNP_6_C11_1347436.nocnv_hg19.seg.txt	broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2013.0	Level_3	yes	broad.mit.edu:mirror_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg_2014051800	BRCA-FFPE.snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.seg.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_BRCA-FFPE.Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg.Level_3.2014051800.0.0	yes
