Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	TTotCov	TVarCov	NTotCov	NVarCov	Trna_tot	Trna_ref	Trna_var	Trna_alt1	Trna_alt2
CASZ1	54897	bcgsc.ca	37	1	10714014	10714014	+	Silent	SNP	C	C	A	rs200767755	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	89	7	99	0	5	5	0	0	0
DNAJC16	23341	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	15890499	15890500	+	Frame_Shift_Del	DEL	GA	GA	-	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	GA	GA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	306	86	308	0	0	0	0	0	0
CROCC	9696	ucsc.edu	37	1	17297216	17297216	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	40	4	42	0	11	11	0	0	0
SNHG3	8420	ucsc.edu	37	1	28835103	28835103	+	RNA	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	39	4	40	0	2	2	0	0	0
PUM1	9698	bcgsc.ca	37	1	31465392	31465392	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	254	11	257	0	10	10	0	0	0
POMGNT1	55624	ucsc.edu	37	1	46659552	46659552	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	57	1	27	27	0	0	0
CYP4Z2P	163720	bcgsc.ca	37	1	47365958	47365958	+	RNA	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	80	7	68	0	0	0	0	0	0
CYP4A22	284541	ucsc.edu	37	1	47614339	47614339	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	213	3	212	1	69	32	37	0	0
GLIS1	148979	ucsc.edu	37	1	53975608	53975608	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	30	4	27	0	10	10	0	0	0
SSBP3	23648	hgsc.bcm.edu	37	1	54694017	54694017	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	104	8	69	1	0	0	0	0	0
ST6GALNAC5	81849	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	77528824	77528824	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	153	49	139	0	10	10	0	0	0
ST6GALNAC5	81849	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	77528835	77528835	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	153	46	136	0	11	11	0	0	0
CELSR2	1952	ucsc.edu	37	1	109811764	109811764	+	Nonsense_Mutation	SNP	G	G	T	rs200883264	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	33	4	50	0	9	9	0	0	0
PGLYRP4	57115	ucsc.edu	37	1	153309741	153309741	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	42	4	59	0	0	0	0	0	0
SEMA4A	64218	ucsc.edu	37	1	156124464	156124464	+	Missense_Mutation	SNP	G	G	T	rs143602559		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	15	4	23	0	0	0	0	0	0
TTC24	164118	ucsc.edu	37	1	156552155	156552155	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	5	23	0	0	0	0	0	0
NTRK1	4914	ucsc.edu	37	1	156848917	156848917	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	70	0	0	0	0	0	0
RXRG	6258	bcgsc.ca	37	1	165386446	165386446	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	180	8	141	0	0	0	0	0	0
TPR	7175	ucsc.edu	37	1	186319500	186319500	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	28	4	22	0	13	13	0	0	0
TRAF3IP3	80342	ucsc.edu	37	1	209948730	209948730	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	28	4	29	0	11	11	0	0	0
NVL	4931	bcgsc.ca	37	1	224482025	224482025	+	Silent	SNP	C	C	A	rs147300158	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	136	7	137	0	4	4	0	0	0
LIN9	286826	bcgsc.ca	37	1	226421111	226421111	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	281	11	208	0	1	1	0	0	0
EGLN1	54583	bcgsc.ca	37	1	231556782	231556782	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	152	7	171	0	27	27	0	0	0
DISC1	27185	ucsc.edu	37	1	231829919	231829919	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	53	0	0	0	0	0	0
NID1	4811	ucsc.edu	37	1	236187504	236187504	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	53	5	60	0	0	0	0	0	0
RYR2	6262	bcgsc.ca	37	1	237806689	237806689	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	191	10	155	0	0	0	0	0	0
TRIM58	25893	ucsc.edu	37	1	248031336	248031336	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	32	4	18	0	0	0	0	0	0
PROSER2	254427	ucsc.edu;bcgsc.ca	37	10	11908762	11908762	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	58	6	105	1	31	31	0	0	0
PRPF18	8559	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	13658431	13658431	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	159	46	153	0	25	16	9	0	0
YME1L1	10730	bcgsc.ca	37	10	27409432	27409432	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	110	7	96	0	48	48	0	0	0
BMS1	9790	ucsc.edu	37	10	43315737	43315737	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	174	3	169	3	73	60	13	0	0
ANXA2P3	305	ucsc.edu	37	10	66586303	66586303	+	RNA	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	26	4	28	0	0	0	0	0	0
NPFFR1	64106	ucsc.edu	37	10	72026147	72026147	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	4	24	0	0	0	0	0	0
IDE	3416	ucsc.edu	37	10	94264639	94264639	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	40	4	39	0	2	2	0	0	0
CYP26A1	1592	bcgsc.ca	37	10	94834144	94834144	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	210	10	281	0	0	0	0	0	0
PIPSL	266971	ucsc.edu	37	10	95720368	95720368	+	RNA	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	81	2	77	1	11	6	5	0	0
PIK3AP1	118788	bcgsc.ca	37	10	98469437	98469437	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	109	8	104	0	9	9	0	0	0
TDRD1	56165	ucsc.edu	37	10	115987827	115987827	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	37	5	32	0	0	0	0	0	0
ZRANB1	54764	ucsc.edu	37	10	126673520	126673520	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	45	5	45	0	32	32	0	0	0
TTC40	54777	ucsc.edu	37	10	134659716	134659716	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	35	4	39	0	0	0	0	0	0
TTC40	54777	bcgsc.ca	37	10	134752168	134752168	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	156	8	180	0	2	2	0	0	0
DENND5A	23258	ucsc.edu	37	11	9161268	9161268	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	42	0	23	23	0	0	0
C11orf58	10944	bcgsc.ca	37	11	16760377	16760377	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	84	7	101	0	0	0	0	0	0
AGBL2	79841	bcgsc.ca	37	11	47711871	47711871	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	239	11	233	0	1	1	0	0	0
OR4D9	390199	bcgsc.ca	37	11	59282505	59282505	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	252	10	251	0	0	0	0	0	0
VWCE	220001	ucsc.edu	37	11	61058749	61058749	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	38	5	51	0	0	0	0	0	0
METTL12	751071	bcgsc.ca	37	11	62434313	62434313	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	102	7	94	0	3	3	0	0	0
SLC22A6	9356	ucsc.edu	37	11	62752130	62752130	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	48	6	33	0	0	0	0	0	0
MAP4K2	5871	ucsc.edu	37	11	64570105	64570105	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	28	0	2	2	0	0	0
EHBP1L1	254102	ucsc.edu	37	11	65350843	65350843	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	33	4	44	0	9	9	0	0	0
ANKRD13D	338692	bcgsc.ca	37	11	67059185	67059185	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	86	7	92	0	9	9	0	0	0
PTPRCAP	5790	broad.mit.edu;bcgsc.ca	37	11	67203274	67203287	+	Frame_Shift_Del	DEL	GCAAAGGCGTGCAG	GCAAAGGCGTGCAG	-	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	GCAAAGGCGTGCAG	GCAAAGGCGTGCAG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	8	42	0	0	0	0	0	0
CABP4	57010	ucsc.edu	37	11	67223893	67223893	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	51	5	62	0	0	0	0	0	0
FCHSD2	9873	ucsc.edu	37	11	72549901	72549901	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	4	53	0	14	14	0	0	0
ARHGEF17	9828	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	73066676	73066676	+	Silent	SNP	C	C	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	77	29	58	0	10	4	6	0	0
OR2AT4	341152	ucsc.edu	37	11	74800093	74800093	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	37	4	65	0	0	0	0	0	0
CREBZF	58487	bcgsc.ca	37	11	85375645	85375645	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	177	8	232	0	3	3	0	0	0
HEPHL1	341208	hgsc.bcm.edu	37	11	93806328	93806328	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	40	2	38	0	0	0	0	0	0
AMOTL1	154810	broad.mit.edu;ucsc.edu	37	11	94532582	94532582	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	13	8	10	0	2	2	0	0	0
DDX10	1662	ucsc.edu	37	11	108536012	108536012	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	40	4	49	0	6	6	0	0	0
MLL	4297	bcgsc.ca	37	11	118374159	118374159	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	69	5	92	0	2	2	0	0	0
PHLDB1	23187	bcgsc.ca	37	11	118498072	118498072	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	98	7	100	0	7	7	0	0	0
SORL1	6653	bcgsc.ca	37	11	121475876	121475876	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	238	12	177	0	4	4	0	0	0
VSIG2	23584	ucsc.edu	37	11	124620611	124620611	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	35	4	37	0	0	0	0	0	0
NINJ2	4815	ucsc.edu	37	12	675340	675340	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	35	4	40	0	0	0	0	0	0
WNT5B	81029	bcgsc.ca	37	12	1755353	1755353	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	120	9	88	0	0	0	0	0	0
CACNA1C-AS1	100652846	ucsc.edu	37	12	2786395	2786395	+	RNA	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	40	4	32	0	0	0	0	0	0
COPS7A	50813	ucsc.edu	37	12	6839984	6839984	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	39	4	47	0	6	6	0	0	0
C1R	715	ucsc.edu;bcgsc.ca	37	12	7244123	7244123	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	27	6	32	0	51	51	0	0	0
PZP	5858	bcgsc.ca	37	12	9345276	9345276	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	139	8	127	0	0	0	0	0	0
DENND5B	160518	ucsc.edu	37	12	31579296	31579296	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	39	4	18	0	1	1	0	0	0
OR6C65	403282	bcgsc.ca	37	12	55795000	55795000	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	232	10	158	0	0	0	0	0	0
LRP1	4035	hgsc.bcm.edu	37	12	57585136	57585136	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	82	6	57	0	2	2	0	0	0
R3HDM2	22864	bcgsc.ca	37	12	57652719	57652719	+	Missense_Mutation	SNP	C	C	A	rs199873508	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	184	8	180	0	21	21	0	0	0
SSH1	54434	ucsc.edu;bcgsc.ca	37	12	109182939	109182939	+	Missense_Mutation	SNP	C	C	A	rs138286846	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	29	5	36	0	4	4	0	0	0
SRRM4	84530	ucsc.edu	37	12	119583350	119583350	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	36	4	32	0	0	0	0	0	0
EFHA1	221154	ucsc.edu	37	13	22141052	22141052	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	39	4	22	0	13	13	0	0	0
NUFIP1	26747	ucsc.edu	37	13	45563322	45563322	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	4	58	0	1	1	0	0	0
PCDH20	64881	bcgsc.ca	37	13	61985904	61985904	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	103	7	115	1	2	2	0	0	0
ITGBL1	9358	bcgsc.ca	37	13	102344983	102344983	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	147	8	169	1	1	1	0	0	0
C13orf35	400165	ucsc.edu	37	13	113333795	113333795	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	43	4	52	0	0	0	0	0	0
MCF2L	23263	bcgsc.ca	37	13	113728835	113728835	+	Silent	SNP	G	G	A	rs146333822	byfrequency;alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	94	6	143	0	14	13	1	0	0
OR5AU1	390445	bcgsc.ca	37	14	21624078	21624078	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	167	9	142	0	0	0	0	0	0
LINC00639	283547	ucsc.edu	37	14	39304892	39304892	+	RNA	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	37	4	28	0	0	0	0	0	0
FLJ31306	0	bcgsc.ca	37	14	58751649	58751649	+	RNA	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	78	19	59	0	212	211	0	0	0
TMEM30B	161291	ucsc.edu	37	14	61746927	61746927	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	50	5	51	0	0	0	0	0	0
MAP3K9	4293	bcgsc.ca	37	14	71202680	71202680	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	104	8	85	0	0	0	0	0	0
ELMSAN1	91748	ucsc.edu	37	14	74205788	74205788	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	33	4	33	0	1	1	0	0	0
ASB2	51676	ucsc.edu	37	14	94405761	94405761	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	40	4	80	0	0	0	0	0	0
FMN1	342184	hgsc.bcm.edu	37	15	33066522	33066522	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	2	23	0	0	0	0	0	0
RYR3	6263	ucsc.edu	37	15	34047298	34047298	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	42	4	42	0	0	0	0	0	0
CHRM5	1133	ucsc.edu	37	15	34355212	34355212	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	42	4	47	0	0	0	0	0	0
SPINT1	6692	bcgsc.ca	37	15	41148498	41148498	+	Missense_Mutation	SNP	G	G	T	rs200944233	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	115	7	147	0	75	75	0	0	0
SPTBN5	51332	ucsc.edu	37	15	42143316	42143316	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	30	4	30	0	7	7	0	0	0
MYO5C	55930	ucsc.edu	37	15	52497105	52497105	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	37	4	53	0	4	4	0	0	0
TPM1	7168	bcgsc.ca	37	15	63354452	63354452	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	140	8	122	0	171	171	0	0	0
RAB11A	8766	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	66180113	66180113	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	130	15	122	0	178	147	31	0	0
IQCH	64799	bcgsc.ca	37	15	67692530	67692530	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	69	6	73	0	2	2	0	0	0
LINGO1	84894	bcgsc.ca	37	15	77906616	77906616	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	96	7	96	0	3	3	0	0	0
UBE2Q2P1	388165	bcgsc.ca	37	15	85077417	85077417	+	RNA	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	27	5	25	0	0	0	0	0	0
NTRK3	4916	bcgsc.ca	37	15	88690588	88690588	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	99	7	82	0	1	1	0	0	0
AXIN1	8312	bcgsc.ca	37	16	343615	343615	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	170	9	209	0	20	20	0	0	0
WDR90	197335	ucsc.edu	37	16	716911	716911	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	4	48	0	0	0	0	0	0
HS3ST6	64711	ucsc.edu	37	16	1962128	1962128	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	30	4	27	0	0	0	0	0	0
TRAF7	84231	ucsc.edu	37	16	2213981	2213981	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	42	4	61	0	18	18	0	0	0
ZNF205	7755	ucsc.edu	37	16	3169444	3169444	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	14	4	18	0	12	12	0	0	0
GLYR1	84656	bcgsc.ca	37	16	4861192	4861192	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	187	8	202	0	44	44	0	0	0
GSPT1	2935	hgsc.bcm.edu	37	16	12009529	12009529	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	5	2	7	2	1	1	0	0	0
ABCC6P1	653190	bcgsc.ca	37	16	18584362	18584362	+	RNA	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	46	6	46	0	12	12	0	0	0
BCL7C	9274	bcgsc.ca	37	16	30903957	30903957	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	71	7	79	0	30	30	0	0	0
PAPD5	64282	bcgsc.ca	37	16	50250015	50250015	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	241	10	181	0	6	6	0	0	0
NOD2	64127	ucsc.edu	37	16	50731158	50731158	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	16	4	11	0	0	0	0	0	0
CHD9	80205	hgsc.bcm.edu	37	16	53301951	53301951	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	67	4	54	0	0	0	0	0	0
RSPRY1	89970	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	57265132	57265132	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	89	27	72	0	13	5	8	0	0
DUS2L	54920	bcgsc.ca	37	16	68110551	68110551	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	151	9	169	1	16	16	0	0	0
SPIRE2	84501	ucsc.edu	37	16	89936642	89936642	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	24	4	20	0	1	1	0	0	0
FAM57A	79850	bcgsc.ca	37	17	643752	643752	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	178	8	131	0	1	1	0	0	0
RTN4RL1	146760	ucsc.edu	37	17	1840295	1840295	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	25	4	26	0	0	0	0	0	0
TRPV3	162514	ucsc.edu	37	17	3421951	3421951	+	Silent	SNP	G	G	T	rs185216052	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	4	16	0	0	0	0	0	0
CLDN7	1366	broad.mit.edu	37	17	7163815	7163815	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	20	29	5	454	442	12	0	0
ZBTB4	57659	ucsc.edu	37	17	7369888	7369888	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	30	0	35	35	0	0	0
WDR16	146845	bcgsc.ca	37	17	9536335	9536335	+	Silent	SNP	C	C	A	rs144319003	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	111	6	78	0	0	0	0	0	0
TVP23C	201158	ucsc.edu	37	17	15457087	15457087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	591	72	381	44	23	0	23	0	0
NCOR1	9611	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	15935762	15935762	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	214	41	139	0	66	49	17	0	0
ATPAF2	91647	bcgsc.ca	37	17	17925109	17925109	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	404	15	332	1	62	62	0	0	0
KSR1	8844	bcgsc.ca	37	17	25924419	25924419	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	80	7	58	0	1	1	0	0	0
TMEM199	147007	bcgsc.ca	37	17	26685990	26685990	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	139	8	107	1	52	52	0	0	0
PNMT	5409	ucsc.edu	37	17	37826558	37826558	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	35	4	29	0	0	0	0	0	0
KRTAP4-7	100132476	ucsc.edu	37	17	39240808	39240808	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	42	5	45	0	0	0	0	0	0
RND2	8153	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	41180521	41180521	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	113	30	112	0	4	1	3	0	0
GFAP	2670	ucsc.edu	37	17	42992789	42992789	+	Silent	SNP	C	C	A	rs143260656	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	30	5	36	0	0	0	0	0	0
NME1-NME2	654364	bcgsc.ca	37	17	49245663	49245663	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	328	12	218	0	898	898	0	0	0
MARCH10	162333	bcgsc.ca	37	17	60802407	60802407	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	174	8	123	0	0	0	0	0	0
SDK2	54549	bcgsc.ca	37	17	71427750	71427750	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	154	7	131	0	0	0	0	0	0
GGA3	23163	bcgsc.ca	37	17	73237565	73237565	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	273	9	233	0	26	26	0	0	0
EVPL	2125	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	74005355	74005355	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	432	94	451	0	16	10	6	0	0
FASN	2194	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	80053200	80053200	+	Silent	SNP	G	G	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	101	13	106	0	0	0	0	0	0
DSC3	1825	ucsc.edu	37	18	28588039	28588039	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	22	0	0	0	0	0	0
TPGS2	25941	bcgsc.ca	37	18	34398863	34398863	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	199	9	199	0	0	0	0	0	0
POLI	11201	ucsc.edu	37	18	51809360	51809360	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	33	4	31	0	8	8	0	0	0
NEDD4L	23327	ucsc.edu	37	18	56033430	56033430	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	45	5	22	0	14	14	0	0	0
NEDD4L	23327	ucsc.edu	37	18	56033454	56033454	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	39	4	23	0	0	0	0	0	0
CPLX4	339302	ucsc.edu	37	18	56963931	56963931	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	43	4	49	0	0	0	0	0	0
PHLPP1	23239	ucsc.edu	37	18	60497328	60497328	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	40	4	30	0	1	1	0	0	0
CDH7	1005	bcgsc.ca	37	18	63477230	63477230	+	Silent	SNP	C	C	A	rs140800301	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	194	10	188	0	0	0	0	0	0
ZNF516	9658	bcgsc.ca	37	18	74091561	74091561	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	146	8	162	0	2	2	0	0	0
CTDP1	9150	ucsc.edu	37	18	77513770	77513770	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	39	4	42	0	9	9	0	0	0
AMH	268	bcgsc.ca	37	19	2250681	2250681	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	5	4	16	0	0	0	0	0	0
THOP1	7064	ucsc.edu	37	19	2805043	2805043	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	43	4	31	0	8	8	0	0	0
EEF2	1938	ucsc.edu	37	19	3983279	3983279	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	31	5	36	0	1	1	0	0	0
LRG1	116844	bcgsc.ca	37	19	4538124	4538124	+	Missense_Mutation	SNP	C	C	A	rs144112190	byfrequency;alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	129	7	150	1	8	8	0	0	0
PLIN3	10226	ucsc.edu	37	19	4839404	4839404	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	4	61	0	73	73	0	0	0
LONP1	9361	bcgsc.ca	37	19	5692104	5692104	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	177	8	219	0	71	71	0	0	0
FBN3	84467	bcgsc.ca	37	19	8193996	8193996	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	160	8	188	0	0	0	0	0	0
CD320	51293	broad.mit.edu	37	19	8373241	8373248	+	Splice_Site	DEL	GCGCGGGG	GCGCGGGG	-	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	GCGCGGGG	GCGCGGGG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	9	4	8	0	0	0	0	0	0
NOTCH3	4854	ucsc.edu	37	19	15299094	15299094	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	22	5	26	0	3	3	0	0	0
SIN3B	23309	ucsc.edu;bcgsc.ca	37	19	16989425	16989425	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	27	5	36	0	5	5	0	0	0
JAK3	3718	bcgsc.ca	37	19	17941408	17941408	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	97	6	118	0	4	4	0	0	0
ZNF536	9745	broad.mit.edu	37	19	31039693	31039693	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	120	7	117	0	0	0	0	0	0
NPHS1	4868	bcgsc.ca	37	19	36334448	36334448	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	128	7	140	0	1	1	0	0	0
LRFN3	79414	hgsc.bcm.edu	37	19	36431041	36431041	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	106	6	161	0	4	4	0	0	0
MEGF8	1954	ucsc.edu;bcgsc.ca	37	19	42861619	42861619	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	100	33	131	2	7	1	6	0	0
CEACAM1	634	ucsc.edu	37	19	43013185	43013185	+	RNA	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	39	4	39	0	1	1	0	0	0
GPR4	2828	bcgsc.ca	37	19	46094974	46094974	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	121	7	125	0	0	0	0	0	0
CCDC9	26093	bcgsc.ca	37	19	47763866	47763866	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	133	7	168	0	8	8	0	0	0
POLD1	5424	ucsc.edu	37	19	50902134	50902134	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	28	4	23	0	2	2	0	0	0
POLD1	5424	ucsc.edu	37	19	50912460	50912460	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	37	4	52	0	6	6	0	0	0
ZNF525	170958	ucsc.edu	37	19	53886478	53886478	+	RNA	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	27	4	22	0	0	0	0	0	0
LILRB1	10859	ucsc.edu	37	19	55145112	55145112	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	51	0	4	4	0	0	0
GP6	51206	ucsc.edu	37	19	55526341	55526341	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	33	4	35	0	0	0	0	0	0
NLRP5	126206	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	56539072	56539072	+	Silent	SNP	C	C	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	56	25	49	0	0	0	0	0	0
ZNF274	10782	ucsc.edu	37	19	58718561	58718561	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	35	4	33	0	0	0	0	0	0
TPO	7173	ucsc.edu;bcgsc.ca	37	2	1497623	1497623	+	Silent	SNP	C	C	A	rs148782927	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	53	5	82	0	0	0	0	0	0
IFT172	26160	hgsc.bcm.edu;bcgsc.ca	37	2	27685657	27685657	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	118	6	142	0	0	0	0	0	0
FAM179A	165186	ucsc.edu	37	2	29221072	29221072	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	17	4	36	0	0	0	0	0	0
PLEKHH2	130271	bcgsc.ca	37	2	43939470	43939470	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	122	8	93	0	28	28	0	0	0
LRPPRC	10128	bcgsc.ca	37	2	44172522	44172522	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	131	7	94	0	21	21	0	0	0
OTX1	5013	ucsc.edu	37	2	63282997	63282997	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	38	4	39	0	0	0	0	0	0
ZNF638	27332	ucsc.edu	37	2	71607358	71607358	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	52	5	35	0	0	0	0	0	0
ST3GAL5	8869	bcgsc.ca	37	2	86067447	86067447	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	104	8	93	0	5	5	0	0	0
STARD7	56910	ucsc.edu	37	2	96861217	96861217	+	Missense_Mutation	SNP	G	G	T	rs200880792	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	42	4	35	0	23	23	0	0	0
TMEM131	23505	broad.mit.edu	37	2	98427639	98427639	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	426	10	309	0	0	0	0	0	0
INPP4A	3631	ucsc.edu	37	2	99179934	99179934	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	32	4	38	0	0	0	0	0	0
TGFBRAP1	9392	ucsc.edu	37	2	105897160	105897160	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	4	53	0	4	4	0	0	0
CLASP1	23332	ucsc.edu	37	2	122168530	122168530	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	36	4	22	0	2	2	0	0	0
CLASP1	23332	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	122206659	122206659	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	39	12	39	0	4	3	1	0	0
CNTNAP5	129684	ucsc.edu	37	2	125521357	125521357	+	Silent	SNP	C	C	A	rs200813034	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	43	4	36	0	0	0	0	0	0
IWS1	55677	bcgsc.ca	37	2	128262665	128262665	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	311	11	319	3	21	21	0	0	0
NCKAP5	344148	ucsc.edu	37	2	133547605	133547605	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	28	4	16	0	0	0	0	0	0
ZRANB3	84083	ucsc.edu	37	2	136103190	136103190	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	38	4	28	0	0	0	0	0	0
DARS	1615	bcgsc.ca	37	2	136719007	136719007	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	106	8	83	1	49	49	0	0	0
LRP1B	53353	bcgsc.ca	37	2	141762960	141762960	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	82	6	72	0	0	0	0	0	0
CIR1	9541	bcgsc.ca	37	2	175213593	175213593	+	Silent	SNP	G	G	T	rs142976215	byfrequency;alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	221	9	234	1	39	39	0	0	0
TTN	7273	bcgsc.ca	37	2	179635300	179635300	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	168	9	153	0	0	0	0	0	0
ZNF385B	151126	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	180309603	180309603	+	Silent	SNP	T	T	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	242	72	229	1	0	0	0	0	0
BOLL	66037	bcgsc.ca	37	2	198646501	198646501	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	269	11	200	0	0	0	0	0	0
ALPP	250	hgsc.bcm.edu	37	2	233244230	233244230	+	Missense_Mutation	SNP	A	A	G	rs1130341		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	28	3	30	0	0	0	0	0	0
USP40	55230	hgsc.bcm.edu	37	2	234450984	234450984	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	8	3	5	0	4	2	2	0	0
SIGLEC1	6614	ucsc.edu	37	20	3678718	3678718	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	26	4	27	0	0	0	0	0	0
HM13	81502	ucsc.edu;bcgsc.ca	37	20	30156073	30156073	+	RNA	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	26	5	41	0	0	0	0	0	0
CDK5RAP1	51654	bcgsc.ca	37	20	31954807	31954807	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	100	6	76	0	0	0	0	0	0
TRPC4AP	26133	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	33591257	33591257	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	126	36	129	0	44	26	18	0	0
DLGAP4	22839	bcgsc.ca	37	20	35128761	35128761	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	104	7	118	0	38	38	0	0	0
BPI	671	bcgsc.ca	37	20	36952337	36952337	+	Silent	SNP	C	C	A	rs201390253	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	104	6	130	0	0	0	0	0	0
PREX1	57580	ucsc.edu	37	20	47364387	47364387	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	21	4	28	0	1	1	0	0	0
ATP9A	10079	ucsc.edu	37	20	50221493	50221493	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	33	4	63	0	3	3	0	0	0
APCDD1L	164284	bcgsc.ca	37	20	57036180	57036180	+	Missense_Mutation	SNP	C	C	A	rs142546037	byfrequency;alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	114	7	160	0	0	0	0	0	0
KCNQ2	3785	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	20	62078166	62078166	+	Silent	SNP	G	G	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	172	51	202	0	0	0	0	0	0
C20orf195	79025	bcgsc.ca	37	20	62187070	62187070	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	55	6	42	0	0	0	0	0	0
ANKRD30BP2	149992	ucsc.edu	37	21	14439185	14439185	+	RNA	SNP	C	C	A	rs112098339		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	38	4	13	0	0	0	0	0	0
ANKRD30BP2	149992	ucsc.edu	37	21	14439208	14439208	+	RNA	SNP	A	A	G	rs201330039		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	38	4	13	0	3	3	0	0	0
LTN1	26046	ucsc.edu	37	21	30365165	30365165	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	35	4	51	0	0	0	0	0	0
TXNRD2	10587	ucsc.edu	37	22	19886581	19886581	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	43	4	73	0	0	0	0	0	0
CABIN1	23523	ucsc.edu	37	22	24560519	24560519	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	61	0	0	0	0	0	0
EMID1	129080	bcgsc.ca	37	22	29611567	29611567	+	Silent	SNP	C	C	A	rs143360764	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	97	7	118	0	0	0	0	0	0
ASCC2	84164	bcgsc.ca	37	22	30185133	30185133	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	514	18	620	0	86	86	0	0	0
RFPL2	10739	ucsc.edu	37	22	32598347	32598347	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	19	4	13	0	0	0	0	0	0
SLC5A4	6527	bcgsc.ca	37	22	32644765	32644765	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	173	10	103	1	0	0	0	0	0
MFNG	4242	ucsc.edu	37	22	37866057	37866057	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	39	4	27	0	1	1	0	0	0
MKL1	57591	ucsc.edu	37	22	40815024	40815024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	39	4	58	0	11	11	0	0	0
CCDC174	51244	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	14695999	14695999	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	38	17	30	0	12	9	3	0	0
COLQ	8292	ucsc.edu;bcgsc.ca	37	3	15516977	15516977	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	20	6	17	0	2	2	0	0	0
GALNT15	117248	hgsc.bcm.edu	37	3	16254119	16254119	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	89	5	90	0	0	0	0	0	0
DPH3	285381	hgsc.bcm.edu;bcgsc.ca	37	3	16302327	16302327	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	68	4	49	0	1	1	0	0	0
PLCL2	23228	bcgsc.ca	37	3	17053418	17053418	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	176	10	198	0	5	5	0	0	0
SLC22A13	9390	hgsc.bcm.edu	37	3	38317479	38317479	+	Missense_Mutation	SNP	C	C	A	rs117371763	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	75	5	55	0	0	0	0	0	0
BSN	8927	ucsc.edu	37	3	49694717	49694717	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	63	0	0	0	0	0	0
RBM15B	29890	bcgsc.ca	37	3	51430862	51430862	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	96	6	104	0	32	32	0	0	0
POC1A	25886	bcgsc.ca	37	3	52183866	52183866	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	115	7	173	0	0	0	0	0	0
CHDH	55349	ucsc.edu	37	3	53857446	53857446	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	23	4	18	0	43	42	0	1	0
MINA	84864	bcgsc.ca	37	3	97686262	97686262	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	193	9	166	0	3	3	0	0	0
SENP7	57337	bcgsc.ca	37	3	101044851	101044851	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	112	7	74	0	8	8	0	0	0
MYH15	22989	bcgsc.ca	37	3	108211403	108211403	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	91	7	55	0	0	0	0	0	0
SEMA5B	54437	bcgsc.ca	37	3	122629060	122629060	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	78	7	90	0	11	11	0	0	0
ITGB5	3693	ucsc.edu	37	3	124483287	124483287	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	53	5	51	0	79	79	0	0	0
CHCHD6	84303	ucsc.edu	37	3	126676267	126676267	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	28	4	21	0	2	2	0	0	0
PLXNA1	5361	ucsc.edu;bcgsc.ca	37	3	126724052	126724052	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	30	5	28	0	1	1	0	0	0
FAM86HP	729375	ucsc.edu	37	3	129817022	129817022	+	RNA	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	33	4	40	0	0	0	0	0	0
CHRD	8646	ucsc.edu	37	3	184105761	184105761	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	4	51	0	4	4	0	0	0
CHRD	8646	ucsc.edu	37	3	184105773	184105773	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	4	50	0	2	2	0	0	0
HRG	3273	bcgsc.ca	37	3	186389555	186389555	+	Silent	SNP	C	C	A	rs145379172	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	93	7	86	0	1	1	0	0	0
CRMP1	1400	ucsc.edu	37	4	5823542	5823542	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	36	5	23	0	7	7	0	0	0
CLNK	116449	ucsc.edu	37	4	10492133	10492133	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	33	4	30	1	0	0	0	0	0
PPARGC1A	10891	bcgsc.ca	37	4	23815463	23815463	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	149	10	130	0	7	7	0	0	0
BEND4	389206	ucsc.edu	37	4	42145916	42145916	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	32	4	27	0	0	0	0	0	0
CWH43	80157	bcgsc.ca	37	4	49063892	49063892	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	69	6	47	0	3	3	0	0	0
NDST3	9348	ucsc.edu;bcgsc.ca	37	4	118975418	118975418	+	Missense_Mutation	SNP	C	C	A	rs182633951	by1000genomes;alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	60	6	47	0	0	0	0	0	0
C4orf46	201725	ucsc.edu	37	4	159592857	159592857	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	20	4	30	0	1	1	0	0	0
DDX60L	91351	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	169337906	169337906	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	111	33	82	0	6	3	3	0	0
MYO10	4651	ucsc.edu	37	5	16704744	16704744	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	38	4	49	0	6	6	0	0	0
ZFR	51663	bcgsc.ca	37	5	32364063	32364063	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	63	6	50	0	0	0	0	0	0
C5orf51	285636	ucsc.edu	37	5	41904493	41904493	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	51	5	58	0	0	0	0	0	0
MAP3K1	4214	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	56177037	56177037	+	Silent	SNP	T	T	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	76	25	48	0	5	2	3	0	0
MAP3K1	4214	bcgsc.ca	37	5	56177746	56177746	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	85	7	82	0	0	0	0	0	0
PDE8B	8622	bcgsc.ca	37	5	76624831	76624831	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	118	8	124	1	0	0	0	0	0
CMYA5	202333	ucsc.edu	37	5	79086847	79086847	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	47	0	7	7	0	0	0
PCDHGC3	5098	ucsc.edu	37	5	140856302	140856302	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	44	4	50	0	0	0	0	0	0
FGFR4	2264	bcgsc.ca	37	5	176518782	176518782	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	90	6	123	0	0	0	0	0	0
GCM2	9247	bcgsc.ca	37	6	10875072	10875072	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	127	8	109	0	0	0	0	0	0
C4A	720	hgsc.bcm.edu	37	6	31964785	31964785	+	Silent	SNP	T	T	G	rs9501603	bycluster;by2hit2allele;byhapmap	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	2	2	4	1	502	0	501	0	1
PIM1	5292	bcgsc.ca	37	6	37138954	37138954	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	263	10	279	1	10	10	0	0	0
DST	667	ucsc.edu	37	6	56357879	56357879	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	31	4	21	0	0	0	0	0	0
MICAL1	64780	ucsc.edu	37	6	109773818	109773818	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	35	4	30	0	0	0	0	0	0
BCLAF1	9774	bcgsc.ca	37	6	136593177	136593177	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	122	7	73	0	19	19	0	0	0
RAET1G	353091	ucsc.edu;bcgsc.ca	37	6	150244106	150244106	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	19	4	23	0	0	0	0	0	0
SYNE1	23345	bcgsc.ca	37	6	152545682	152545682	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	92	6	91	0	5	5	0	0	0
LPA	4018	bcgsc.ca	37	6	160999587	160999587	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	211	9	222	0	0	0	0	0	0
SDK1	221935	ucsc.edu	37	7	4188999	4188999	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	28	4	28	0	6	6	0	0	0
ZNF890P	645700	ucsc.edu	37	7	5167311	5167311	+	RNA	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	51	4	33	1	6	6	0	0	0
TNS3	64759	bcgsc.ca	37	7	47384527	47384527	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	90	6	73	0	0	0	0	0	0
CLIP2	7461	ucsc.edu	37	7	73770927	73770927	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	36	4	34	0	6	6	0	0	0
SGCE	8910	bcgsc.ca	37	7	94259058	94259058	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	339	15	200	0	10	10	0	0	0
PPP1R9A	55607	hgsc.bcm.edu;bcgsc.ca	37	7	94827675	94827675	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	152	12	81	0	2	2	0	0	0
TRIM4	89122	bcgsc.ca	37	7	99490157	99490157	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	232	10	190	1	36	36	0	0	0
ZAN	7455	ucsc.edu	37	7	100389708	100389708	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	44	4	33	0	0	0	0	0	0
DUS4L	11062	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	107216872	107216872	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	114	30	69	0	11	9	2	0	0
STRIP2	57464	bcgsc.ca	37	7	129091474	129091474	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	126	8	112	1	0	0	0	0	0
TRIM24	8805	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	7	138145434	138145434	+	Silent	SNP	G	G	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	29	12	23	0	1	1	0	0	0
AGK	55750	bcgsc.ca	37	7	141341086	141341086	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	131	7	82	0	44	44	0	0	0
PDIA4	9601	bcgsc.ca	37	7	148709019	148709019	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	141	8	130	0	47	47	0	0	0
PRKAG2	51422	bcgsc.ca	37	7	151265858	151265858	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	121	7	94	0	9	9	0	0	0
C8orf74	203076	bcgsc.ca	37	8	10555322	10555322	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	141	7	185	0	0	0	0	0	0
CLU	1191	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	27457323	27457323	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	27	10	33	0	11724	7197	4516	2	8
FGFR1	2260	ucsc.edu	37	8	38287416	38287416	+	Missense_Mutation	SNP	C	C	T	rs121909640		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	40	4	54	0	3	3	0	0	0
KAT6A	7994	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	41791942	41791942	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	12	4	28	0	3	2	1	0	0
SBF1P1	100133234	ucsc.edu	37	8	56366236	56366236	+	RNA	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	26	4	16	0	0	0	0	0	0
SLC26A7	115111	bcgsc.ca	37	8	92365155	92365155	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	188	9	125	0	0	0	0	0	0
POP1	10940	hgsc.bcm.edu	37	8	99140760	99140760	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	79	4	70	1	0	0	0	0	0
COL22A1	169044	bcgsc.ca	37	8	139638441	139638441	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	120	8	98	0	0	0	0	0	0
TSTA3	7264	ucsc.edu;bcgsc.ca	37	8	144695752	144695752	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	38	6	52	0	61	61	0	0	0
SCRIB	23513	ucsc.edu	37	8	144889175	144889175	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	37	0	3	3	0	0	0
OPLAH	26873	ucsc.edu	37	8	145113510	145113510	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	43	4	39	0	4	4	0	0	0
MROH1	727957	bcgsc.ca	37	8	145235333	145235333	+	Missense_Mutation	SNP	G	G	T	rs191289982	alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	75	6	90	0	0	0	0	0	0
GPT	2875	broad.mit.edu;bcgsc.ca	37	8	145730807	145730807	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	16	4	31	0	20	10	10	0	0
JAK2	3717	ucsc.edu	37	9	5077564	5077564	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	35	4	20	0	7	7	0	0	0
HAUS6	54801	ucsc.edu	37	9	19080661	19080661	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	4	34	0	0	0	0	0	0
NOL6	65083	bcgsc.ca	37	9	33463848	33463848	+	Missense_Mutation	SNP	C	C	A	rs115548117	byfrequency;alternate_allele	TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	106	7	151	0	16	16	0	0	0
CCDC180	0	bcgsc.ca	37	9	100082423	100082423	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	364	13	393	0	2	2	0	0	0
RGS3	5998	bcgsc.ca	37	9	116346546	116346546	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	106	7	140	0	10	10	0	0	0
DFNB31	25861	ucsc.edu	37	9	117266836	117266836	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	35	4	59	0	1	1	0	0	0
SH2D3C	10044	ucsc.edu	37	9	130501983	130501983	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	42	4	50	0	4	4	0	0	0
ABL1	25	ucsc.edu	37	9	133738360	133738360	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	41	4	72	0	7	7	0	0	0
ABL1	25	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	9	133759489	133759489	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	257	89	258	2	20	10	10	0	0
GBGT1	26301	ucsc.edu	37	9	136037769	136037769	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	24	4	19	0	1	1	0	0	0
PPP1R26	9858	ucsc.edu	37	9	138377695	138377695	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	37	4	43	0	13	13	0	0	0
MIR126	406913	ucsc.edu	37	9	139565132	139565132	+	RNA	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	23	4	33	0	0	0	0	0	0
NDOR1	27158	bcgsc.ca	37	9	140110450	140110450	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	181	9	226	0	3	3	0	0	0
ARSE	415	ucsc.edu	37	X	2873502	2873502	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	36	4	25	0	2	2	0	0	0
ACE2	59272	bcgsc.ca	37	X	15607531	15607531	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	237	10	182	0	35	35	0	0	0
RPS6KA3	6197	hgsc.bcm.edu	37	X	20195138	20195138	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	68	4	39	0	5	5	0	0	0
CASK	8573	ucsc.edu	37	X	41448799	41448799	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	38	4	32	0	20	20	0	0	0
TSR2	90121	ucsc.edu	37	X	54470969	54470969	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	34	4	43	0	41	41	0	0	0
ITIH6	347365	ucsc.edu	37	X	54800514	54800514	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	43	4	32	0	0	0	0	0	0
RGAG4	340526	ucsc.edu	37	X	71349749	71349749	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	27	4	38	0	0	0	0	0	0
RPS4X	6191	ucsc.edu	37	X	71493218	71493218	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	32	4	29	0	1023	1022	0	0	1
XIST	7503	bcgsc.ca	37	X	73071294	73071294	+	RNA	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	182	8	202	0	0	0	0	0	0
ZDHHC15	158866	ucsc.edu	37	X	74698771	74698771	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	40	4	30	0	3	3	0	0	0
DRP2	1821	bcgsc.ca	37	X	100492628	100492628	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	113	7	87	0	0	0	0	0	0
TEX13A	56157	ucsc.edu	37	X	104464685	104464685	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	36	5	57	0	0	0	0	0	0
LRCH2	57631	ucsc.edu	37	X	114357725	114357725	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	32	4	19	0	0	0	0	0	0
CT47B1	643311	bcgsc.ca	37	X	120008754	120008754	+	Silent	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	118	8	129	0	0	0	0	0	0
BCORL1	63035	bcgsc.ca	37	X	129147515	129147515	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	145	7	154	0	2	2	0	0	0
FHL1	2273	ucsc.edu;bcgsc.ca	37	X	135291546	135291546	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	50	5	51	0	64	64	0	0	0
GPR112	139378	bcgsc.ca	37	X	135430253	135430253	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	122	9	107	0	0	0	0	0	0
ARHGEF6	9459	ucsc.edu	37	X	135790926	135790926	+	Silent	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	42	5	29	0	0	0	0	0	0
SLITRK2	84631	bcgsc.ca	37	X	144904478	144904478	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	97	6	106	0	0	0	0	0	0
PLXNB3	5365	ucsc.edu	37	X	153033827	153033827	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	35	4	43	0	0	0	0	0	0
FLNA	2316	ucsc.edu	37	X	153589692	153589692	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	38	4	60	0	12	12	0	0	0
PLXNA3	55558	ucsc.edu	37	X	153694062	153694062	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	42	4	77	0	2	2	0	0	0
CUBN	8029	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	16957909	16957910	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-DW-7837-01A-11D-2136-08	TCGA-DW-7837-10A-01D-2136-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	ec9b4fb0-c3b1-4a2b-a3e7-393b27f961da	5a082628-cf8e-4550-812a-28faf2a1735e	141	51	128	0	0	0	0	0	0
