Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	TTotCov	TVarCov	NTotCov	NVarCov	Trna_tot	Trna_ref	Trna_var	Trna_alt1	Trna_alt2
SAMD11	148398	ucsc.edu	37	1	865692	865692	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	18	4	23	0	3	3	0	0	0
SKI	6497	hgsc.bcm.edu	37	1	2160390	2160390	+	Missense_Mutation	SNP	C	C	G	rs28384811		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	6	3	3	2	0	0	0	0	0
ARHGEF16	27237	ucsc.edu	37	1	3397113	3397113	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	5	63	0	13	13	0	0	0
CAMTA1	23261	bcgsc.ca	37	1	7811382	7811382	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	196	9	218	0	5	5	0	0	0
PER3	8863	ucsc.edu	37	1	7880578	7880578	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	43	0	14	14	0	0	0
SLC2A5	6518	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	9097752	9097752	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	181	30	209	0	97	97	0	0	0
TMEM201	199953	ucsc.edu	37	1	9656062	9656062	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	30	0	0	0	0	0	0
NPPA	4878	bcgsc.ca	37	1	11907410	11907410	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	91	7	90	0	0	0	0	0	0
VPS13D	55187	bcgsc.ca	37	1	12368654	12368654	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	187	8	214	0	7	7	0	0	0
VPS13D	55187	bcgsc.ca	37	1	12567061	12567061	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	147	9	167	1	35	35	0	0	0
CELA2A	63036	ucsc.edu	37	1	15783624	15783624	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	4	86	0	0	0	0	0	0
TMEM82	388595	ucsc.edu	37	1	16071022	16071022	+	Missense_Mutation	SNP	G	G	T	rs143295979	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	57	0	0	0	0	0	0
ZBTB17	7709	ucsc.edu	37	1	16271011	16271011	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	14	4	12	0	22	22	0	0	0
CLCNKB	1188	ucsc.edu	37	1	16375509	16375509	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	21	4	35	0	0	0	0	0	0
UBR4	23352	bcgsc.ca	37	1	19492230	19492230	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	89	7	90	0	13	13	0	0	0
PLA2G2D	26279	ucsc.edu	37	1	20440615	20440615	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	27	4	63	0	62	62	0	0	0
CDA	978	ucsc.edu	37	1	20915761	20915761	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	63	0	5	5	0	0	0
EIF4G3	8672	bcgsc.ca	37	1	21212814	21212814	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	256	12	232	0	34	33	0	1	0
ALPL	249	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	21902288	21902288	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	186	25	278	0	3	3	0	0	0
ZBTB40	9923	bcgsc.ca	37	1	22835602	22835602	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	164	10	171	0	0	0	0	0	0
STPG1	90529	bcgsc.ca	37	1	24710446	24710446	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	219	10	216	2	7	7	0	0	0
SRRM1	10250	ucsc.edu;bcgsc.ca	37	1	24981516	24981516	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	7	73	0	62	61	0	1	0
CNKSR1	10256	ucsc.edu	37	1	26510991	26510991	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	16	4	27	0	0	0	0	0	0
CEP85	64793	ucsc.edu	37	1	26595093	26595093	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	49	0	9	9	0	0	0
SH3BGRL3	83442	ucsc.edu	37	1	26607593	26607593	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	44	0	688	688	0	0	0
WASF2	10163	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	27739179	27739179	+	Silent	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	128	22	147	0	85	55	30	0	0
THEMIS2	9473	ucsc.edu	37	1	28206166	28206166	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	46	5	86	0	2	2	0	0	0
PTAFR	5724	bcgsc.ca	37	1	28477209	28477209	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	111	9	107	0	39	39	0	0	0
LAPTM5	7805	ucsc.edu	37	1	31215372	31215372	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	67	0	430	430	0	0	0
BAI2	576	ucsc.edu	37	1	32193865	32193865	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	5	72	0	38	38	0	0	0
IQCC	55721	bcgsc.ca	37	1	32673133	32673133	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	98	7	96	0	1	1	0	0	0
EIF3I	8668	hgsc.bcm.edu;bcgsc.ca	37	1	32694404	32694404	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	330	18	402	2	354	354	0	0	0
NCDN	23154	bcgsc.ca	37	1	36026528	36026528	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	120	10	185	0	35	35	0	0	0
NCDN	23154	ucsc.edu	37	1	36028146	36028146	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	38	0	43	43	0	0	0
COL8A2	1296	ucsc.edu	37	1	36565744	36565744	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	63	0	7	7	0	0	0
STK40	83931	ucsc.edu	37	1	36808980	36808980	+	Silent	SNP	C	C	A	rs76939556	by1000genomes;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	21	4	34	0	47	47	0	0	0
ZC3H12A	80149	ucsc.edu	37	1	37941292	37941292	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	57	0	8	8	0	0	0
DNALI1	7802	ucsc.edu	37	1	38027313	38027313	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	5	47	0	72	72	0	0	0
MACF1	23499	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	39888512	39888512	+	Silent	SNP	C	C	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	115	11	116	0	43	36	7	0	0
MACF1	23499	ucsc.edu	37	1	39908522	39908522	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	34	0	64	64	0	0	0
SZT2	23334	ucsc.edu	37	1	43903317	43903317	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	61	0	13	13	0	0	0
SZT2	23334	ucsc.edu	37	1	43912647	43912647	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	56	0	13	13	0	0	0
PTPRF	5792	ucsc.edu	37	1	44054578	44054578	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	5	39	0	71	71	0	0	0
PLK3	1263	ucsc.edu	37	1	45269306	45269306	+	Silent	SNP	C	C	A	rs149513425	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	21	4	35	0	40	40	0	0	0
PLK3	1263	bcgsc.ca	37	1	45270383	45270383	+	Silent	SNP	C	C	A	rs139294226	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	254	10	352	0	20	20	0	0	0
TESK2	10420	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	45813333	45813333	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	175	38	217	0	3	3	0	0	0
MMACHC	25974	bcgsc.ca	37	1	45974781	45974781	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	168	10	344	0	8	8	0	0	0
TMEM69	51249	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	46159260	46159260	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	176	31	196	0	48	32	16	0	0
SPATA6	54558	ucsc.edu	37	1	48869541	48869541	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	5	35	0	0	0	0	0	0
ZFYVE9	9372	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	52704507	52704507	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	176	32	173	0	4	3	1	0	0
ZYG11B	79699	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	53262039	53262039	+	Silent	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	71	10	69	0	15	9	6	0	0
OMA1	115209	ucsc.edu	37	1	58999897	58999897	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	51	5	63	0	16	16	0	0	0
LPHN2	23266	bcgsc.ca	37	1	82432164	82432164	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	109	8	79	0	26	26	0	0	0
MCOLN2	255231	ucsc.edu	37	1	85462549	85462549	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	5	44	0	3	3	0	0	0
ODF2L	57489	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	86851227	86851227	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	53	12	43	0	1	1	0	0	0
ZNF644	84146	ucsc.edu	37	1	91404117	91404117	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	60	6	53	0	20	20	0	0	0
BCAR3	8412	bcgsc.ca	37	1	94037263	94037263	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	110	8	135	0	19	19	0	0	0
ABCA4	24	broad.mit.edu	37	1	94522330	94522330	+	Silent	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	14	3	24	0	0	0	0	0	0
ARHGAP29	9411	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	94639942	94639942	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	341	56	428	0	182	104	78	0	0
PALMD	54873	ucsc.edu	37	1	100159631	100159631	+	RNA	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	43	0	7	7	0	0	0
TRMT13	54482	ucsc.edu	37	1	100609634	100609634	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	29	0	0	0	0	0	0
GSTM1	2944	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	110233169	110233169	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	240	72	317	0	93	77	16	0	0
CHIAP2	149620	bcgsc.ca	37	1	111825180	111825180	+	RNA	DEL	G	G	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	132	30	178	0	0	0	0	0	0
CSDE1	7812	ucsc.edu	37	1	115276479	115276479	+	Splice_Site	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	55	0	1	1	0	0	0
ADAMTSL4	54507	ucsc.edu	37	1	150525696	150525696	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	5	73	0	15	15	0	0	0
LCE1C	353133	ucsc.edu	37	1	152777914	152777914	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	79	0	0	0	0	0	0
LCE1A	353131	ucsc.edu	37	1	152800265	152800265	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	5	40	0	0	0	0	0	0
INSRR	3645	ucsc.edu	37	1	156821562	156821562	+	Silent	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	54	6	48	0	0	0	0	0	0
PEAR1	375033	ucsc.edu	37	1	156883778	156883778	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	25	4	38	0	2	2	0	0	0
OR10J1	26476	bcgsc.ca	37	1	159410211	159410211	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	144	9	144	0	0	0	0	0	0
ATP1A2	477	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	160105252	160105252	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	73	12	110	0	1	1	0	0	0
ATP1A4	480	bcgsc.ca	37	1	160143421	160143421	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	132	9	141	0	0	0	0	0	0
LY9	4063	ucsc.edu	37	1	160786475	160786475	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	50	0	3	3	0	0	0
USP21	27005	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	161134645	161134645	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	96	21	109	0	21	13	8	0	0
NDUFS2	4720	ucsc.edu	37	1	161179354	161179354	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	5	44	0	113	113	0	0	0
FAM78B	149297	ucsc.edu;bcgsc.ca	37	1	166039992	166039992	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	6	59	0	0	0	0	0	0
DCAF6	55827	ucsc.edu	37	1	168044661	168044661	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	4	28	0	118	118	0	0	0
NME7	29922	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	169102046	169102046	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	66	7	71	0	1	1	0	0	0
TNR	7143	bcgsc.ca	37	1	175304874	175304874	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	188	10	167	0	0	0	0	0	0
TEX35	84066	ucsc.edu	37	1	178490003	178490003	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	4	54	0	0	0	0	0	0
CACNA1E	777	ucsc.edu	37	1	181767829	181767829	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	16	4	27	0	0	0	0	0	0
TPR	7175	ucsc.edu	37	1	186289534	186289534	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	30	0	102	102	0	0	0
FAM5C	339479	bcgsc.ca	37	1	190067483	190067483	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	157	8	187	0	0	0	0	0	0
UBE2T	29089	bcgsc.ca	37	1	202302381	202302381	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	475	17	468	0	13	13	0	0	0
PPFIA4	8497	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	203036824	203036824	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	67	8	94	0	0	0	0	0	0
SOX13	9580	ucsc.edu	37	1	204092874	204092874	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	5	62	0	13	13	0	0	0
PIK3C2B	5287	ucsc.edu	37	1	204419029	204419029	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	46	5	69	0	2	2	0	0	0
CDK18	5129	ucsc.edu	37	1	205498170	205498170	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	19	4	19	0	15	15	0	0	0
CTSE	1510	ucsc.edu	37	1	206329027	206329027	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	57	6	57	0	0	0	0	0	0
PIGR	5284	ucsc.edu	37	1	207106513	207106513	+	Splice_Site	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	1	66	0	3	3	0	0	0
TAF5L	27097	bcgsc.ca	37	1	229738185	229738185	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	98	8	146	0	0	0	0	0	0
TRIM67	440730	ucsc.edu	37	1	231342467	231342467	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	53	5	47	0	0	0	0	0	0
LYST	1130	bcgsc.ca	37	1	235850331	235850331	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	121	8	129	1	9	9	0	0	0
RYR2	6262	ucsc.edu	37	1	237693764	237693764	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	23	4	10	0	0	0	0	0	0
ZBTB18	10472	ucsc.edu	37	1	244218333	244218333	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	62	7	105	0	48	48	0	0	0
IL2RA	3559	bcgsc.ca	37	10	6063507	6063507	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	200	9	224	0	6	6	0	0	0
SFMBT2	57713	ucsc.edu	37	10	7214457	7214457	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	62	0	0	0	0	0	0
ARHGAP21	57584	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	24908604	24908604	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	156	25	177	0	0	0	0	0	0
KIAA1462	57608	ucsc.edu	37	10	30316835	30316835	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	53	5	59	0	17	17	0	0	0
CCNY	219771	bcgsc.ca	37	10	35772385	35772385	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	90	8	63	0	60	60	0	0	0
GJD4	219770	ucsc.edu	37	10	35896561	35896561	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	5	108	0	0	0	0	0	0
HSD17B7P2	158160	broad.mit.edu	37	10	38654432	38654432	+	RNA	SNP	A	A	G	rs2257765	bysubmitter	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	85	4	98	0	10	2	8	0	0
ZNF485	220992	ucsc.edu	37	10	44112764	44112764	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	55	6	48	0	5	5	0	0	0
ATOH7	220202	bcgsc.ca	37	10	69991224	69991224	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	7	63	0	0	0	0	0	0
STOX1	219736	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	70645179	70645179	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	53	12	63	0	0	0	0	0	0
TACR2	6865	ucsc.edu	37	10	71175775	71175775	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	44	0	0	0	0	0	0
OIT3	170392	bcgsc.ca	37	10	74666435	74666435	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	268	12	322	1	0	0	0	0	0
DUSP13	51207	ucsc.edu	37	10	76857615	76857615	+	Silent	SNP	G	G	T	rs138543174	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	40	0	0	0	0	0	0
KCNMA1	3778	bcgsc.ca	37	10	78647061	78647061	+	Missense_Mutation	SNP	C	C	A	rs200410171	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	196	10	275	1	43	43	0	0	0
ZMIZ1	57178	ucsc.edu	37	10	81063806	81063806	+	Silent	SNP	G	G	T	rs147064960	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	49	0	84	84	0	0	0
LRIT1	26103	broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	85997318	85997318	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	48	10	54	0	0	0	0	0	0
TM9SF3	56889	ucsc.edu	37	10	98303911	98303911	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	56	6	59	0	164	164	0	0	0
DNMBP	23268	ucsc.edu	37	10	101645599	101645599	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	48	5	41	0	7	7	0	0	0
WNT8B	7479	ucsc.edu	37	10	102242540	102242540	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	25	4	24	0	0	0	0	0	0
NDUFB8	4714	ucsc.edu	37	10	102286185	102286185	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	47	6	65	0	356	356	0	0	0
NRAP	4892	bcgsc.ca	37	10	115413822	115413822	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	382	14	431	2	0	0	0	0	0
SEC23IP	11196	bcgsc.ca	37	10	121663655	121663655	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	113	9	106	0	19	19	0	0	0
FGFR2	2263	ucsc.edu	37	10	123278337	123278337	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	56	6	79	0	0	0	0	0	0
IKZF5	64376	hgsc.bcm.edu;bcgsc.ca	37	10	124755609	124755609	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	136	8	157	0	15	15	0	0	0
DOCK1	1793	ucsc.edu	37	10	129209158	129209158	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	5	34	0	45	45	0	0	0
MKI67	4288	bcgsc.ca	37	10	129902189	129902189	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	150	8	194	0	4	4	0	0	0
KNDC1	85442	ucsc.edu	37	10	135025355	135025355	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	4	46	0	0	0	0	0	0
PAOX	196743	ucsc.edu	37	10	135195001	135195001	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	75	0	13	13	0	0	0
B4GALNT4	338707	bcgsc.ca	37	11	373763	373763	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	88	7	128	0	0	0	0	0	0
RNH1	6050	bcgsc.ca	37	11	498022	498022	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	150	9	186	0	313	311	0	1	1
PHRF1	57661	bcgsc.ca	37	11	607577	607577	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	100	9	140	0	22	22	0	0	0
SLC25A22	79751	ucsc.edu	37	11	794480	794480	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	27	4	31	0	15	15	0	0	0
TOLLIP	54472	ucsc.edu	37	11	1311528	1311528	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	48	5	37	0	77	77	0	0	0
CARS	833	ucsc.edu;bcgsc.ca	37	11	3039117	3039117	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	83	8	66	0	33	33	0	0	0
ZNF143	7702	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	9519250	9519250	+	Silent	SNP	T	T	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	56	8	69	0	17	10	7	0	0
MICAL2	9645	ucsc.edu	37	11	12183943	12183943	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	56	0	7	7	0	0	0
PIK3C2A	5286	ucsc.edu	37	11	17150847	17150847	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	5	60	0	0	0	0	0	0
PTPN5	84867	ucsc.edu	37	11	18751080	18751080	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	45	0	0	0	0	0	0
MRGPRX1	259249	bcgsc.ca	37	11	18955703	18955703	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	91	6	106	1	0	0	0	0	0
NELL1	4745	ucsc.edu	37	11	20691274	20691274	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	48	0	0	0	0	0	0
BDNF	627	bcgsc.ca	37	11	27679712	27679712	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	115	9	161	0	7	7	0	0	0
METTL15	196074	bcgsc.ca	37	11	28318305	28318305	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	112	8	108	0	0	0	0	0	0
QSER1	79832	bcgsc.ca	37	11	32953509	32953509	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	129	10	142	0	1	1	0	0	0
HIPK3	10114	bcgsc.ca	37	11	33309048	33309048	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	175	9	215	4	0	0	0	0	0
KIAA1549L	25758	ucsc.edu	37	11	33689622	33689622	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	68	0	0	0	0	0	0
CAT	847	bcgsc.ca	37	11	34492538	34492538	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	208	11	265	0	191	191	0	0	0
MAPK8IP1	9479	ucsc.edu	37	11	45919730	45919730	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	40	0	0	0	0	0	0
DGKZ	8525	ucsc.edu	37	11	46393283	46393283	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	27	4	38	0	40	40	0	0	0
LRP4	4038	ucsc.edu	37	11	46890254	46890254	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	54	6	53	0	0	0	0	0	0
MADD	8567	ucsc.edu	37	11	47317127	47317127	+	Silent	SNP	C	C	A	rs150985573	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	6	71	0	0	0	0	0	0
RAPSN	5913	ucsc.edu;bcgsc.ca	37	11	47469615	47469615	+	Nonsense_Mutation	SNP	C	C	A	rs200550567	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	56	12	70	0	0	0	0	0	0
CTNND1	1500	ucsc.edu	37	11	57574386	57574386	+	Splice_Site	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	16	4	17	0	0	0	0	0	0
GIF	2694	hgsc.bcm.edu;bcgsc.ca	37	11	59610049	59610049	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	58	9	81	1	0	0	0	0	0
MS4A14	84689	ucsc.edu	37	11	60183468	60183468	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	64	1	7	7	0	0	0
DAGLA	747	ucsc.edu	37	11	61503083	61503083	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	77	0	7	7	0	0	0
FADS1	3992	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	61578255	61578255	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	146	26	218	0	14	8	6	0	0
EEF1G	1937	ucsc.edu	37	11	62341309	62341309	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	4	65	0	0	0	0	0	0
EML3	256364	ucsc.edu	37	11	62378721	62378721	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	5	52	0	56	56	0	0	0
SLC22A8	9376	hgsc.bcm.edu;bcgsc.ca	37	11	62760990	62760990	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	130	8	137	0	1	1	0	0	0
PLCB3	5331	ucsc.edu	37	11	64022726	64022726	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	46	0	21	21	0	0	0
EHBP1L1	254102	ucsc.edu;bcgsc.ca	37	11	65349498	65349498	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	51	7	51	0	59	59	0	0	0
SIPA1	6494	bcgsc.ca	37	11	65413699	65413699	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	119	8	209	0	2	2	0	0	0
SPTBN2	6712	ucsc.edu	37	11	66453549	66453549	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	4	49	0	15	15	0	0	0
SPTBN2	6712	ucsc.edu	37	11	66457740	66457740	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	25	5	26	0	7	7	0	0	0
SSH3	54961	ucsc.edu	37	11	67076948	67076948	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	64	7	106	0	49	49	0	0	0
TBC1D10C	374403	ucsc.edu	37	11	67171804	67171804	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	65	0	13	13	0	0	0
ALDH3B2	222	ucsc.edu	37	11	67434075	67434075	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	57	0	0	0	0	0	0
CHKA	1119	ucsc.edu	37	11	67829474	67829474	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	4	26	0	16	16	0	0	0
MRGPRD	116512	ucsc.edu	37	11	68747838	68747838	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	52	0	0	0	0	0	0
CTTN	2017	ucsc.edu	37	11	70279368	70279368	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	34	0	83	82	0	0	1
PDE2A	5138	ucsc.edu	37	11	72292463	72292463	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	45	5	43	0	0	0	0	0	0
ARHGEF17	9828	ucsc.edu	37	11	73068317	73068317	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	4	51	0	20	20	0	0	0
PPME1	51400	ucsc.edu	37	11	73958159	73958159	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	5	36	0	1	1	0	0	0
LRRC32	2615	ucsc.edu	37	11	76371568	76371568	+	Silent	SNP	G	G	T	rs201222193	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	53	5	77	0	38	38	0	0	0
USP35	57558	bcgsc.ca	37	11	77920667	77920667	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	138	8	185	0	4	4	0	0	0
TENM4	26011	ucsc.edu	37	11	78369610	78369610	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	4	44	0	5	5	0	0	0
TENM4	26011	ucsc.edu	37	11	78381284	78381284	+	Nonsense_Mutation	SNP	C	C	A	rs200508306	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	48	0	0	0	0	0	0
PCF11	51585	ucsc.edu	37	11	82879861	82879861	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	53	0	14	14	0	0	0
ANKRD42	338699	ucsc.edu	37	11	82947479	82947479	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	41	0	9	9	0	0	0
CCDC67	159989	ucsc.edu	37	11	93141417	93141417	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	21	4	11	0	1	1	0	0	0
CASP4	837	bcgsc.ca	37	11	104820399	104820399	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	146	8	164	0	104	104	0	0	0
ATM	472	ucsc.edu	37	11	108236212	108236212	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	44	0	26	26	0	0	0
CADM1	23705	bcgsc.ca	37	11	115088622	115088622	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	95	8	101	0	0	0	0	0	0
SIDT2	51092	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	117052793	117052793	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	28	8	54	0	27	22	5	0	0
DSCAML1	57453	ucsc.edu;bcgsc.ca	37	11	117403208	117403208	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	84	8	102	0	0	0	0	0	0
IL10RA	3587	ucsc.edu	37	11	117869795	117869795	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	5	65	0	122	122	0	0	0
ARCN1	372	bcgsc.ca	37	11	118452033	118452033	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	100	8	109	0	74	74	0	0	0
SLC37A4	2542	ucsc.edu;bcgsc.ca	37	11	118895952	118895952	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	17	5	34	0	39	39	0	0	0
C2CD2L	9854	ucsc.edu	37	11	118983432	118983432	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	79	0	17	17	0	0	0
NLRX1	79671	ucsc.edu	37	11	119044726	119044726	+	Silent	SNP	G	G	T	rs199539903	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	85	0	25	25	0	0	0
MCAM	4162	ucsc.edu	37	11	119182855	119182855	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	5	82	0	120	120	0	0	0
USP2	9099	bcgsc.ca	37	11	119243433	119243433	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	66	6	92	0	5	5	0	0	0
ARHGEF12	23365	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	120302543	120302543	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	63	7	59	0	52	27	25	0	0
VWA5A	4013	ucsc.edu	37	11	123994495	123994495	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	56	1	40	40	0	0	0
OR8D1	283159	ucsc.edu	37	11	124180053	124180053	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	43	0	0	0	0	0	0
TP53AIP1	63970	ucsc.edu	37	11	128805585	128805585	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	22	4	17	0	0	0	0	0	0
ST14	6768	ucsc.edu	37	11	130078388	130078388	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	65	0	115	115	0	0	0
IGSF9B	22997	ucsc.edu	37	11	133795705	133795705	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	28	4	36	0	0	0	0	0	0
GLB1L3	112937	ucsc.edu	37	11	134162058	134162058	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	63	0	0	0	0	0	0
B3GAT1	27087	ucsc.edu	37	11	134254003	134254003	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	32	0	2	2	0	0	0
WNK1	65125	bcgsc.ca	37	12	994256	994256	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	308	11	310	0	75	75	0	0	0
FKBP4	2288	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	2910312	2910312	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	108	30	155	1	115	61	54	0	0
MRPL51	51258	ucsc.edu	37	12	6602256	6602256	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	56	6	85	0	303	303	0	0	0
ZNF384	171017	ucsc.edu	37	12	6788658	6788658	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	35	0	50	50	0	0	0
CD163	9332	bcgsc.ca	37	12	7640527	7640527	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	100	8	95	0	216	215	0	0	1
NECAP1	25977	bcgsc.ca	37	12	8242578	8242578	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	222	12	179	0	27	27	0	0	0
RIMKLB	57494	bcgsc.ca	37	12	8906597	8906597	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	195	10	175	0	28	28	0	0	0
A2M	2	ucsc.edu	37	12	9265070	9265070	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	65	0	561	559	0	2	0
STYK1	55359	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	10780290	10780290	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	77	24	57	0	0	0	0	0	0
BCL2L14	79370	broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	12232370	12232370	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	72	9	98	0	0	0	0	0	0
PLEKHA5	54477	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	19506893	19506893	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	112	25	87	0	20	8	12	0	0
CNTN1	1272	bcgsc.ca	37	12	41312564	41312564	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	160	9	121	0	0	0	0	0	0
ADAMTS20	80070	ucsc.edu	37	12	43887003	43887003	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	19	4	10	0	0	0	0	0	0
SLC38A4	55089	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	47178364	47178364	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	175	26	169	0	0	0	0	0	0
EIF4B	1975	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	53416313	53416313	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	114	16	105	0	555	445	108	2	0
HOXC10	3226	ucsc.edu	37	12	54379724	54379724	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	4	77	0	51	51	0	0	0
PMEL	6490	ucsc.edu;bcgsc.ca	37	12	56351088	56351088	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	64	7	69	0	7	7	0	0	0
RAB5B	5869	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	56385887	56385887	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	105	35	86	0	1	1	0	0	0
SMARCC2	6601	bcgsc.ca	37	12	56579998	56579998	+	Silent	SNP	C	C	A	rs146067473	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	127	8	118	1	57	57	0	0	0
BAZ2A	11176	bcgsc.ca	37	12	56995525	56995525	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	320	13	317	0	84	84	0	0	0
LRIG3	121227	bcgsc.ca	37	12	59282138	59282138	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	138	9	94	0	13	13	0	0	0
C12orf66	144577	ucsc.edu	37	12	64615970	64615970	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	53	5	61	0	4	4	0	0	0
WIF1	11197	ucsc.edu;bcgsc.ca	37	12	65461550	65461550	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	65	7	79	0	0	0	0	0	0
TMBIM4	51643	bcgsc.ca	37	12	66546128	66546128	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	88	7	48	0	261	260	1	0	0
GRIP1	23426	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	12	66765625	66765625	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	202	34	219	0	0	0	0	0	0
GRIP1	23426	bcgsc.ca	37	12	66935660	66935660	+	Silent	SNP	C	C	A	rs192739695	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	486	17	351	2	3	3	0	0	0
OTOGL	283310	ucsc.edu	37	12	80771727	80771727	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	20	0	1	1	0	0	0
CCDC41	51134	bcgsc.ca	37	12	94702677	94702677	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	139	9	139	0	4	4	0	0	0
FGD6	55785	broad.mit.edu	37	12	95603626	95603626	+	Silent	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	119	3	137	0	5	5	0	0	0
CCDC38	120935	hgsc.bcm.edu;broad.mit.edu	37	12	96273432	96273432	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	100	19	87	0	0	0	0	0	0
TCP11L2	255394	ucsc.edu	37	12	106715287	106715287	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	6	49	0	3	3	0	0	0
RFX4	5992	bcgsc.ca	37	12	107113818	107113818	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	151	8	128	1	0	0	0	0	0
TRPV4	59341	ucsc.edu;bcgsc.ca	37	12	110224604	110224604	+	Silent	SNP	G	G	T	rs141135321	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	62	7	67	0	21	21	0	0	0
TCTN1	79600	bcgsc.ca	37	12	111082789	111082789	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	179	8	168	1	98	98	0	0	0
DNAH10	196385	ucsc.edu;bcgsc.ca	37	12	124319957	124319957	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	45	6	33	0	0	0	0	0	0
NCOR2	9612	ucsc.edu;bcgsc.ca	37	12	124979739	124979739	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	59	7	67	0	46	46	0	0	0
SLC15A4	121260	bcgsc.ca	37	12	129299550	129299550	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	296	15	298	2	39	39	0	0	0
MTMR6	9107	ucsc.edu	37	13	25831396	25831396	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	38	0	10	10	0	0	0
GTF3A	2971	ucsc.edu	37	13	28009625	28009625	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	26	4	34	0	227	227	0	0	0
POLR1D	51082	ucsc.edu	37	13	28222576	28222576	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	26	4	33	0	59	59	0	0	0
SLC7A1	6541	ucsc.edu	37	13	30109956	30109956	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	73	0	0	0	0	0	0
TRPC4	7223	broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	38237841	38237841	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	7	50	0	1	1	0	0	0
RCBTB1	55213	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	13	50115836	50115836	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	86	15	95	0	0	0	0	0	0
RCBTB1	55213	hgsc.bcm.edu	37	13	50115836	50115837	+	Frame_Shift_Del	DEL	CG	CG	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	CG	CG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	91	15	98	0	0	0	0	0	0
RCBTB1	55213	bcgsc.ca	37	13	50115837	50115837	+	Silent	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	84	17	83	0	11	11	0	0	0
LECT1	11061	bcgsc.ca	37	13	53313210	53313210	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	6	47	0	0	0	0	0	0
MYCBP2	23077	bcgsc.ca	37	13	77672692	77672692	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	147	9	165	1	17	17	0	0	0
MYCBP2	23077	ucsc.edu	37	13	77740474	77740474	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	48	0	0	0	0	0	0
SLITRK5	26050	bcgsc.ca	37	13	88330378	88330378	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	189	9	227	0	1	1	0	0	0
GPC5	2262	bcgsc.ca	37	13	93518680	93518680	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	143	8	151	0	0	0	0	0	0
GPR180	160897	broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	95271585	95271585	+	Splice_Site	SNP	G	G	A	rs138676753	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	83	9	67	0	0	0	0	0	0
ABCC4	10257	ucsc.edu	37	13	95726572	95726572	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	43	0	0	0	0	0	0
DOCK9	23348	ucsc.edu	37	13	99479111	99479111	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	19	0	10	10	0	0	0
DOCK9	23348	ucsc.edu	37	13	99481964	99481964	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	21	4	30	0	14	14	0	0	0
TM9SF2	9375	bcgsc.ca	37	13	100196168	100196168	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	125	10	137	0	275	275	0	0	0
NALCN	259232	bcgsc.ca	37	13	101997639	101997639	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	152	9	181	0	0	0	0	0	0
BIVM-ERCC5	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	103492131	103492131	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	164	30	153	0	87	50	37	0	0
F7	2155	ucsc.edu	37	13	113773062	113773062	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	37	0	0	0	0	0	0
TTC5	91875	ucsc.edu	37	14	20757897	20757897	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	34	0	0	0	0	0	0
TEP1	7011	ucsc.edu	37	14	20845913	20845913	+	Splice_Site	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	78	0	0	0	0	0	0
RNASE11	122651	bcgsc.ca	37	14	21052470	21052470	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	257	10	309	0	0	0	0	0	0
MMP14	4323	ucsc.edu	37	14	23310765	23310765	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	4	43	0	157	157	0	0	0
HAUS4	54930	ucsc.edu	37	14	23415835	23415835	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	58	6	76	0	52	52	0	0	0
MYH6	4624	bcgsc.ca	37	14	23853815	23853815	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	81	9	151	1	0	0	0	0	0
IRF9	10379	ucsc.edu	37	14	24632208	24632208	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	80	0	33	33	0	0	0
TGM1	7051	ucsc.edu	37	14	24718601	24718601	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	110	0	2	2	0	0	0
NYNRIN	57523	ucsc.edu	37	14	24886468	24886468	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	23	4	54	0	14	14	0	0	0
PRKD1	5587	ucsc.edu	37	14	30066928	30066928	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	76	8	92	0	7	7	0	0	0
HECTD1	25831	ucsc.edu	37	14	31647450	31647450	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	66	0	0	0	0	0	0
CDKL1	8814	ucsc.edu;bcgsc.ca	37	14	50796825	50796825	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	71	7	70	0	5	5	0	0	0
KTN1	3895	broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	56079010	56079010	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	92	19	93	0	54	20	34	0	0
EXOC5	10640	ucsc.edu	37	14	57710921	57710921	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	45	5	60	0	8	8	0	0	0
WDR89	112840	ucsc.edu	37	14	64066371	64066371	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	64	0	8	8	0	0	0
SYNE2	23224	ucsc.edu	37	14	64519979	64519979	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	45	4	37	0	6	6	0	0	0
ESR2	2100	bcgsc.ca	37	14	64727168	64727168	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	215	11	246	0	0	0	0	0	0
EXD2	55218	ucsc.edu	37	14	69704355	69704355	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	58	0	14	14	0	0	0
SIPA1L1	26037	ucsc.edu	37	14	72085570	72085570	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	5	49	0	10	10	0	0	0
COQ6	51004	ucsc.edu;bcgsc.ca	37	14	74428063	74428063	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	6	43	0	27	27	0	0	0
TMEM63C	57156	ucsc.edu	37	14	77691766	77691766	+	Splice_Site	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	67	0	0	0	0	0	0
EML5	161436	ucsc.edu	37	14	89172684	89172684	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	5	59	0	0	0	0	0	0
NRDE2	55051	ucsc.edu	37	14	90756685	90756685	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	61	0	4	4	0	0	0
CCDC88C	440193	ucsc.edu	37	14	91763664	91763664	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	33	0	5	5	0	0	0
SLC24A4	123041	ucsc.edu	37	14	92909056	92909056	+	Splice_Site	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	6	75	0	0	0	0	0	0
SLC24A4	123041	ucsc.edu	37	14	92920313	92920313	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	58	6	97	0	0	0	0	0	0
CHGA	1113	ucsc.edu	37	14	93396136	93396136	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	32	0	0	0	0	0	0
UBR7	55148	ucsc.edu;bcgsc.ca	37	14	93681327	93681327	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	8	29	0	0	0	0	0	0
FAM181A	90050	ucsc.edu	37	14	94395001	94395001	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	67	0	0	0	0	0	0
CLMN	79789	ucsc.edu	37	14	95669337	95669337	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	63	1	14	14	0	0	0
ATG2B	55102	ucsc.edu	37	14	96752253	96752253	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	77	0	24	24	0	0	0
VRK1	7443	bcgsc.ca	37	14	97342417	97342417	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	226	10	283	0	8	8	0	0	0
SETD3	84193	bcgsc.ca	37	14	99880239	99880239	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	112	8	145	0	119	119	0	0	0
EVL	51466	ucsc.edu	37	14	100607532	100607532	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	68	1	91	90	0	0	1
INF2	64423	ucsc.edu	37	14	105179926	105179926	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	42	0	87	87	0	0	0
JAG2	3714	ucsc.edu	37	14	105618366	105618366	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	98	0	4	4	0	0	0
TRPM1	4308	bcgsc.ca	37	15	31295132	31295132	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	114	8	154	0	0	0	0	0	0
RYR3	6263	ucsc.edu	37	15	33993203	33993203	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	52	0	1	1	0	0	0
RYR3	6263	ucsc.edu	37	15	34032087	34032087	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	51	0	5	5	0	0	0
ZNF770	54989	bcgsc.ca	37	15	35273830	35273830	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	112	8	164	0	52	52	0	0	0
DISP2	85455	ucsc.edu	37	15	40662075	40662075	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	53	0	2	2	0	0	0
DLL4	54567	ucsc.edu	37	15	41227249	41227249	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	5	88	0	3	3	0	0	0
ZFP106	64397	hgsc.bcm.edu	37	15	42720295	42720295	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	127	7	126	0	9	9	0	0	0
RNU6-28	100873756	bcgsc.ca	37	15	43695875	43695875	+	RNA	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	58	6	52	0	18	18	0	0	0
CATSPER2P1	440278	bcgsc.ca	37	15	44037324	44037324	+	RNA	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	376	17	440	3	4	4	0	0	0
GATM	2628	ucsc.edu	37	15	45658699	45658699	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	5	54	0	0	0	0	0	0
GABPB1	2553	ucsc.edu	37	15	50593092	50593092	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	5	37	0	0	0	0	0	0
GLDN	342035	ucsc.edu	37	15	51687116	51687116	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	5	43	0	4	4	0	0	0
UNC13C	440279	ucsc.edu	37	15	54529847	54529847	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	46	0	0	0	0	0	0
NEDD4	4734	ucsc.edu	37	15	56216898	56216898	+	Splice_Site	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	28	5	21	0	0	0	0	0	0
TCF12	6938	ucsc.edu	37	15	57213286	57213286	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	54	6	49	0	0	0	0	0	0
HERC1	8925	bcgsc.ca	37	15	64067421	64067421	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	224	12	219	0	2	2	0	0	0
RASL12	51285	ucsc.edu	37	15	65347299	65347299	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	58	0	0	0	0	0	0
IGDCC4	57722	ucsc.edu	37	15	65676433	65676433	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	49	0	6	6	0	0	0
IQCH	64799	bcgsc.ca	37	15	67757469	67757469	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	112	8	125	0	0	0	0	0	0
SCAPER	49855	bcgsc.ca	37	15	77020948	77020948	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	246	11	248	1	0	0	0	0	0
RASGRF1	5923	ucsc.edu	37	15	79304849	79304849	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	50	0	0	0	0	0	0
EFTUD1	79631	bcgsc.ca	37	15	82444609	82444609	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	224	11	241	0	19	19	0	0	0
ADAMTSL3	57188	bcgsc.ca	37	15	84373237	84373237	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	291	14	302	1	21	21	0	0	0
ALPK3	57538	bcgsc.ca	37	15	85399746	85399746	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	85	7	90	0	10	10	0	0	0
PDE8A	5151	ucsc.edu	37	15	85679889	85679889	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	69	0	0	0	0	0	0
TICRR	90381	bcgsc.ca	37	15	90167030	90167030	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	155	8	194	0	0	0	0	0	0
PLIN1	5346	ucsc.edu	37	15	90213221	90213221	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	25	4	27	0	0	0	0	0	0
ANPEP	290	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	90349567	90349567	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	85	18	137	0	95	94	1	0	0
SV2B	9899	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	91769497	91769497	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	12	47	0	1	1	0	0	0
IGF1R	3480	ucsc.edu	37	15	99465473	99465473	+	Silent	SNP	C	C	A	rs3743262	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	51	5	77	0	21	21	0	0	0
ALDH1A3	220	ucsc.edu	37	15	101454975	101454975	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	46	0	15	15	0	0	0
POLR3K	51728	ucsc.edu	37	16	103500	103500	+	Silent	SNP	G	G	T	rs201123190	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	61	0	31	31	0	0	0
NPRL3	8131	ucsc.edu	37	16	138842	138842	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	53	0	94	94	0	0	0
TMEM8A	58986	ucsc.edu	37	16	422270	422270	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	4	36	0	2	2	0	0	0
LMF1	64788	hgsc.bcm.edu	37	16	1004476	1004476	+	Missense_Mutation	SNP	C	C	G	rs115313199		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	6	35	0	31	20	11	0	0
CIITA	4261	ucsc.edu	37	16	10992549	10992549	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	27	0	23	23	0	0	0
ABCC1	4363	ucsc.edu	37	16	16225744	16225744	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	46	5	67	0	12	12	0	0	0
ABCC1	4363	ucsc.edu	37	16	16230386	16230386	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	49	0	24	24	0	0	0
XYLT1	64131	bcgsc.ca	37	16	17353017	17353017	+	Silent	SNP	G	G	T	rs141549535	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	140	8	203	0	3	3	0	0	0
GPRC5B	51704	ucsc.edu	37	16	19873236	19873236	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	83	8	98	0	21	21	0	0	0
DNAH3	55567	ucsc.edu;bcgsc.ca	37	16	20999031	20999031	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	64	7	75	0	0	0	0	0	0
PALB2	79728	ucsc.edu	37	16	23635356	23635356	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	28	0	17	17	0	0	0
RBBP6	5930	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	24582943	24582943	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	45	8	42	0	24	18	6	0	0
GTF3C1	2975	bcgsc.ca	37	16	27523218	27523218	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	69	6	82	0	0	0	0	0	0
ATP2A1	487	bcgsc.ca	37	16	28913550	28913550	+	Silent	SNP	G	G	T	rs139456854	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	89	7	193	0	0	0	0	0	0
CD19	930	ucsc.edu;bcgsc.ca	37	16	28944651	28944651	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	57	7	76	0	0	0	0	0	0
MVP	9961	ucsc.edu	37	16	29851666	29851666	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	22	4	27	0	224	224	0	0	0
ZNF646	9726	ucsc.edu	37	16	31091066	31091066	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	57	0	16	16	0	0	0
NETO2	81831	bcgsc.ca	37	16	47117548	47117548	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	126	9	127	0	6	6	0	0	0
ABCC11	85320	ucsc.edu	37	16	48221271	48221271	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	38	0	0	0	0	0	0
ABCC11	85320	ucsc.edu	37	16	48264423	48264423	+	Missense_Mutation	SNP	C	C	A	rs151293814	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	55	0	1	1	0	0	0
ZNF423	23090	ucsc.edu	37	16	49670138	49670138	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	43	0	0	0	0	0	0
ZNF423	23090	ucsc.edu	37	16	49671067	49671067	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	61	6	84	0	1	1	0	0	0
RPGRIP1L	23322	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	53691402	53691402	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	89	17	57	0	5	3	2	0	0
AMFR	267	bcgsc.ca	37	16	56401438	56401438	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	333	11	401	0	0	0	0	0	0
BBS2	583	ucsc.edu	37	16	56540126	56540126	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	44	0	0	0	0	0	0
NLRC5	84166	ucsc.edu;bcgsc.ca	37	16	57113186	57113186	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	54	6	95	0	16	16	0	0	0
KATNB1	10300	ucsc.edu	37	16	57787890	57787890	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	45	0	40	40	0	0	0
FHOD1	29109	ucsc.edu	37	16	67270510	67270510	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	4	48	0	7	7	0	0	0
SLC7A6OS	84138	bcgsc.ca	37	16	68335254	68335254	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	121	7	162	0	23	23	0	0	0
PRMT7	54496	ucsc.edu	37	16	68390990	68390990	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	5	94	0	17	17	0	0	0
IL34	146433	ucsc.edu	37	16	70693538	70693538	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	58	0	37	37	0	0	0
TXNL4B	54957	bcgsc.ca	37	16	72122934	72122934	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	117	9	113	0	19	19	0	0	0
MON1B	22879	ucsc.edu;bcgsc.ca	37	16	77228378	77228378	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	84	8	142	0	20	20	0	0	0
GSE1	23199	bcgsc.ca	37	16	85682219	85682219	+	Silent	SNP	C	C	A	rs201812312	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	79	7	135	0	20	20	0	0	0
ANKRD11	29123	bcgsc.ca	37	16	89349905	89349905	+	Silent	SNP	G	G	T	rs150652124	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	175	9	203	0	43	43	0	0	0
GLOD4	51031	ucsc.edu	37	17	673295	673295	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	54	0	0	0	0	0	0
PRPF8	10594	bcgsc.ca	37	17	1565398	1565398	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	162	9	190	0	120	120	0	0	0
CLUH	23277	ucsc.edu	37	17	2597493	2597493	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	22	4	36	0	69	69	0	0	0
CAMKK1	84254	ucsc.edu	37	17	3788759	3788759	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	48	0	5	5	0	0	0
ANKFY1	51479	bcgsc.ca	37	17	4085568	4085568	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	189	9	242	1	23	23	0	0	0
CXCL16	58191	ucsc.edu	37	17	4638592	4638592	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	62	0	328	328	0	0	0
C1QBP	708	bcgsc.ca	37	17	5337025	5337025	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	193	10	165	1	132	132	0	0	0
PITPNM3	83394	ucsc.edu	37	17	6367071	6367071	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	25	0	0	0	0	0	0
ACADVL	37	ucsc.edu	37	17	7127863	7127863	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	5	75	0	0	0	0	0	0
DVL2	1856	ucsc.edu	37	17	7133260	7133260	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	55	0	0	0	0	0	0
TNK1	8711	ucsc.edu	37	17	7290442	7290442	+	Silent	SNP	C	C	A	rs139190181	by1000genomes;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	40	0	8	8	0	0	0
SPEM1	374768	ucsc.edu	37	17	7324667	7324667	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	5	69	0	0	0	0	0	0
CNTROB	116840	bcgsc.ca	37	17	7836585	7836585	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	98	8	139	1	15	15	0	0	0
PER1	5187	ucsc.edu	37	17	8051085	8051085	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	48	5	59	0	15	15	0	0	0
VAMP2	6844	ucsc.edu	37	17	8065652	8065652	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	80	0	28	27	0	1	0
ARHGEF15	22899	ucsc.edu	37	17	8218871	8218871	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	50	0	1	1	0	0	0
DNAH9	1770	bcgsc.ca	37	17	11795214	11795214	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	327	13	439	0	0	0	0	0	0
MYO15A	51168	bcgsc.ca	37	17	18053797	18053797	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	85	7	119	0	0	0	0	0	0
USP32P2	220594	broad.mit.edu;bcgsc.ca	37	17	18422906	18422906	+	RNA	SNP	A	A	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	79	16	97	0	42	42	0	0	0
ADAP2	55803	hgsc.bcm.edu;broad.mit.edu	37	17	29261211	29261211	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	59	10	51	0	0	0	0	0	0
TMEM132E	124842	ucsc.edu	37	17	32963140	32963140	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	44	0	2	2	0	0	0
RFFL	117584	ucsc.edu	37	17	33353478	33353478	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	43	0	16	16	0	0	0
AP2B1	163	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	33966737	33966737	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	117	28	97	1	131	69	62	0	0
SRCIN1	80725	ucsc.edu	37	17	36719074	36719074	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	40	0	0	0	0	0	0
CACNB1	782	ucsc.edu	37	17	37340026	37340026	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	31	0	1	1	0	0	0
TOP2A	7153	ucsc.edu	37	17	38572683	38572683	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	22	4	14	0	0	0	0	0	0
KRT36	8689	bcgsc.ca	37	17	39645955	39645955	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	68	6	139	1	0	0	0	0	0
STAT5B	6777	bcgsc.ca	37	17	40362499	40362499	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	125	10	120	0	78	78	0	0	0
PSMC3IP	29893	bcgsc.ca	37	17	40725033	40725033	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	118	9	133	0	11	11	0	0	0
TUBG2	27175	bcgsc.ca	37	17	40817826	40817826	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	139	8	217	1	36	36	0	0	0
BECN1	8678	bcgsc.ca	37	17	40966022	40966022	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	107	7	96	1	0	0	0	0	0
AOC3	8639	ucsc.edu	37	17	41006667	41006667	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	61	0	13	13	0	0	0
RUNDC1	146923	ucsc.edu	37	17	41143225	41143225	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	72	0	9	9	0	0	0
MPP3	4356	ucsc.edu	37	17	41903171	41903171	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	65	0	0	0	0	0	0
UBTF	7343	ucsc.edu	37	17	42284929	42284929	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	54	0	114	114	0	0	0
ADAM11	4185	ucsc.edu	37	17	42851904	42851904	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	58	0	0	0	0	0	0
KANSL1	284058	ucsc.edu	37	17	44110821	44110821	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	5	64	0	0	0	0	0	0
CDK5RAP3	80279	bcgsc.ca	37	17	46056227	46056227	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	115	9	128	0	152	152	0	0	0
CBX1	10951	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	46152378	46152378	+	Silent	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	268	62	273	0	0	0	0	0	0
COL1A1	1277	ucsc.edu;bcgsc.ca	37	17	48267365	48267365	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	68	7	95	0	0	0	0	0	0
CACNA1G	8913	ucsc.edu	37	17	48676929	48676929	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	38	0	0	0	0	0	0
MTMR4	9110	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	56572475	56572475	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	214	58	205	0	12	8	4	0	0
MTMR4	9110	ucsc.edu	37	17	56584104	56584104	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	53	0	0	0	0	0	0
CLTC	1213	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	57771125	57771125	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	144	55	151	0	293	180	113	0	0
ACE	1636	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	61570904	61570904	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	87	18	86	0	24	23	1	0	0
KCNH6	81033	ucsc.edu	37	17	61621619	61621619	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	66	0	0	0	0	0	0
CEP95	90799	ucsc.edu	37	17	62521916	62521916	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	29	0	4	4	0	0	0
AXIN2	8313	bcgsc.ca	37	17	63526178	63526178	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	165	9	157	0	7	7	0	0	0
LINC00674	100499466	ucsc.edu;bcgsc.ca	37	17	66123632	66123632	+	RNA	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	6	40	0	67	67	0	0	0
ARSG	22901	bcgsc.ca	37	17	66364775	66364775	+	Missense_Mutation	SNP	G	G	T	rs113302404	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	208	10	201	0	8	8	0	0	0
ITGB4	3691	ucsc.edu	37	17	73751289	73751289	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	46	4	69	2	1	1	0	0	0
FBF1	85302	ucsc.edu	37	17	73914058	73914058	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	26	4	30	0	19	19	0	0	0
EVPL	2125	ucsc.edu	37	17	74007936	74007936	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	34	0	6	6	0	0	0
SRP68	6730	bcgsc.ca	37	17	74046531	74046531	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	109	8	135	0	180	179	0	1	0
MGAT5B	146664	bcgsc.ca	37	17	74934150	74934150	+	Silent	SNP	C	C	A	rs145781877	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	78	7	90	0	0	0	0	0	0
TMC8	147138	broad.mit.edu;bcgsc.ca	37	17	76133812	76133812	+	Silent	SNP	C	C	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	102	14	136	0	18	18	0	0	0
RNF213	57674	ucsc.edu	37	17	78313948	78313948	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	49	0	24	24	0	0	0
RNF213	57674	ucsc.edu	37	17	78317094	78317094	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	39	0	18	18	0	0	0
BAIAP2	10458	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	79082274	79082274	+	Splice_Site	DEL	G	G	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	55	12	70	0	0	0	0	0	0
NPLOC4	55666	ucsc.edu	37	17	79539115	79539115	+	Splice_Site	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	29	0	1	1	0	0	0
TSPAN10	83882	ucsc.edu	37	17	79612401	79612401	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	5	57	0	2	2	0	0	0
NOTUM	147111	ucsc.edu	37	17	79914583	79914583	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	65	0	0	0	0	0	0
SLC16A3	9123	bcgsc.ca	37	17	80196836	80196836	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	104	7	107	0	350	348	1	0	1
NARF	26502	ucsc.edu	37	17	80436745	80436745	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	45	4	58	0	45	45	0	0	0
CETN1	1068	ucsc.edu	37	18	580534	580534	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	66	0	0	0	0	0	0
LAMA1	284217	ucsc.edu	37	18	7007265	7007265	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	21	4	40	0	0	0	0	0	0
PSMG2	56984	ucsc.edu	37	18	12703122	12703122	+	Missense_Mutation	SNP	G	G	T	rs147189835	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	34	0	53	53	0	0	0
C18orf8	29919	bcgsc.ca	37	18	21098858	21098858	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	97	7	111	0	0	0	0	0	0
DSG2	1829	ucsc.edu	37	18	29100827	29100827	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	56	0	35	34	1	0	0
ZNF396	252884	bcgsc.ca	37	18	32954036	32954036	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	85	8	110	0	2	2	0	0	0
DYM	54808	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	18	46956680	46956680	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	171	29	169	0	18	12	6	0	0
MEX3C	51320	bcgsc.ca	37	18	48703578	48703578	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	197	13	221	0	52	52	0	0	0
ONECUT2	9480	ucsc.edu	37	18	55103902	55103902	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	53	0	0	0	0	0	0
ZCCHC2	54877	bcgsc.ca	37	18	60242723	60242723	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	78	7	62	0	10	10	0	0	0
SERPINB2	5055	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	18	61562567	61562567	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	205	35	231	1	0	0	0	0	0
SOCS6	9306	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	18	67992496	67992496	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	129	28	146	0	0	0	0	0	0
CNDP2	55748	bcgsc.ca	37	18	72186230	72186230	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	112	7	180	1	369	369	0	0	0
TSHZ1	10194	ucsc.edu	37	18	72999677	72999677	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	4	52	0	23	23	0	0	0
MED16	10025	ucsc.edu	37	19	868115	868115	+	Nonsense_Mutation	SNP	C	C	A	rs13090	bycluster;byfrequency;by2hit2allele;by1000genomes;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	30	0	30	30	0	0	0
ABCA7	10347	bcgsc.ca	37	19	1065117	1065117	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	16	5	17	0	7	7	0	0	0
ATP8B3	148229	ucsc.edu	37	19	1811652	1811652	+	Silent	SNP	C	C	A	rs143564708	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	44	0	3	3	0	0	0
PLIN4	729359	ucsc.edu	37	19	4508945	4508945	+	Silent	SNP	G	G	T	rs8105775	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	5	58	0	4	4	0	0	0
PTPRS	5802	ucsc.edu	37	19	5208355	5208355	+	Silent	SNP	C	C	A	rs145313091	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	43	0	90	90	0	0	0
FBN3	84467	ucsc.edu	37	19	8176050	8176050	+	Nonsense_Mutation	SNP	C	C	A	rs150421324	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	55	0	1	1	0	0	0
HNRNPM	4670	ucsc.edu	37	19	8527467	8527467	+	Splice_Site	SNP	T	T	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	156	2	111	3	0	0	0	0	0
MYO1F	4542	hgsc.bcm.edu;bcgsc.ca	37	19	8616967	8616967	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	125	7	188	0	73	73	0	0	0
ACTL9	284382	bcgsc.ca	37	19	8808948	8808948	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	146	10	160	2	0	0	0	0	0
MUC16	94025	ucsc.edu	37	19	9046188	9046188	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	5	56	0	0	0	0	0	0
ZNF699	374879	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	9406673	9406673	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	55	8	57	0	5	4	1	0	0
DNMT1	1786	ucsc.edu	37	19	10265344	10265344	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	4	68	0	33	33	0	0	0
ICAM5	7087	ucsc.edu	37	19	10402464	10402464	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	6	89	1	0	0	0	0	0
ICAM5	7087	ucsc.edu	37	19	10405164	10405164	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	38	0	1	1	0	0	0
ATG4D	84971	hgsc.bcm.edu;bcgsc.ca	37	19	10655668	10655668	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	177	9	290	0	56	56	0	0	0
LDLR	3949	bcgsc.ca	37	19	11233960	11233960	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	68	6	100	0	0	0	0	0	0
DOCK6	57572	bcgsc.ca	37	19	11313349	11313349	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	169	8	254	0	9	9	0	0	0
DOCK6	57572	ucsc.edu	37	19	11338052	11338052	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	50	0	1	1	0	0	0
CCDC130	81576	ucsc.edu;bcgsc.ca	37	19	13873690	13873690	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	17	5	34	0	27	27	0	0	0
ZNF333	84449	ucsc.edu	37	19	14815880	14815880	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	51	5	63	0	3	3	0	0	0
NWD1	284434	ucsc.edu	37	19	16872882	16872882	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	49	0	2	2	0	0	0
UNC13A	23025	bcgsc.ca	37	19	17763482	17763482	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	332	15	447	0	0	0	0	0	0
CCDC124	115098	bcgsc.ca	37	19	18054138	18054138	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	6	25	0	212	212	0	0	0
PIK3R2	5296	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	18274091	18274091	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	75	13	135	0	111	65	46	0	0
ZNF85	7639	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	21132080	21132080	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	8	53	0	100	91	9	0	0
ZNF85	7639	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	21132138	21132138	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	59	0	1	1	0	0	0
ZNF257	113835	ucsc.edu	37	19	22272219	22272219	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	25	4	32	0	0	0	0	0	0
SLC7A9	11136	ucsc.edu	37	19	33355157	33355157	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	54	6	72	0	1	1	0	0	0
KIAA0355	9710	ucsc.edu	37	19	34791439	34791439	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	48	5	71	0	9	9	0	0	0
GRAMD1A	57655	ucsc.edu	37	19	35504493	35504493	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	54	0	81	81	0	0	0
FXYD3	5349	bcgsc.ca	37	19	35613692	35613692	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	118	8	200	0	0	0	0	0	0
LGI4	163175	broad.mit.edu;ucsc.edu	37	19	35617765	35617765	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	5	23	0	0	0	0	0	0
FFAR2	2867	ucsc.edu	37	19	35940919	35940919	+	Silent	SNP	G	G	T	rs61744093	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	49	0	1	1	0	0	0
MLL4	8085	bcgsc.ca	37	19	36221257	36221257	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	429	15	665	0	21	21	0	0	0
ARHGAP33	115703	ucsc.edu	37	19	36271375	36271375	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	5	30	0	2	2	0	0	0
KIRREL2	84063	ucsc.edu	37	19	36348060	36348060	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	28	4	52	1	2	2	0	0	0
HCST	10870	ucsc.edu	37	19	36394711	36394711	+	Silent	SNP	C	C	A	rs144480693	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	60	0	121	121	0	0	0
TYROBP	7305	ucsc.edu	37	19	36398135	36398135	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	18	4	27	0	1515	1513	0	2	0
WDR62	284403	bcgsc.ca	37	19	36584973	36584973	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	137	9	206	0	1	1	0	0	0
SUPT5H	6829	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	39964723	39964723	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	66	11	121	0	144	103	41	0	0
LGALS13	29124	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	40095901	40095901	+	Missense_Mutation	SNP	G	G	T	rs138148689		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	77	14	86	0	0	0	0	0	0
FCGBP	8857	ucsc.edu	37	19	40363970	40363970	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	88	0	154	154	0	0	0
C19orf47	126526	ucsc.edu	37	19	40828259	40828259	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	4	41	0	12	12	0	0	0
PRR19	284338	ucsc.edu;bcgsc.ca	37	19	42814877	42814877	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	78	8	106	0	2	2	0	0	0
LIPE	3991	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	42907053	42907053	+	Silent	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	88	21	121	1	2	2	0	0	0
PSG5	5673	bcgsc.ca	37	19	43689024	43689024	+	Silent	SNP	G	G	T	rs199745569	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	531	18	699	0	0	0	0	0	0
IRGC	56269	ucsc.edu	37	19	44223815	44223815	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	48	0	0	0	0	0	0
ZNF223	7766	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	44570872	44570872	+	Silent	SNP	C	C	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	107	15	148	0	5	1	4	0	0
DMPK	1760	bcgsc.ca	37	19	46282775	46282775	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	155	8	148	0	1	1	0	0	0
STRN4	29888	ucsc.edu	37	19	47228755	47228755	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	54	0	71	71	0	0	0
LIG1	3978	ucsc.edu	37	19	48619185	48619185	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	43	0	40	40	0	0	0
GRWD1	83743	ucsc.edu	37	19	48950073	48950073	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	6	78	0	62	62	0	0	0
PIH1D1	55011	broad.mit.edu	37	19	49950353	49950353	+	Silent	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	93	4	127	0	0	0	0	0	0
FCGRT	2217	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	50017313	50017313	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	19	63	0	388	331	56	1	0
NOSIP	51070	ucsc.edu	37	19	50063244	50063244	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	4	40	0	122	122	0	0	0
ZNF473	25888	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	50549983	50549983	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	111	26	136	0	6	4	2	0	0
KCNC3	3748	ucsc.edu	37	19	50827237	50827237	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	52	0	2	2	0	0	0
MYBPC2	4606	ucsc.edu	37	19	50961984	50961984	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	63	0	2	2	0	0	0
MBOAT7	79143	ucsc.edu	37	19	54682544	54682544	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	65	0	89	89	0	0	0
TTYH1	57348	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	54937848	54937848	+	Splice_Site	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	116	21	162	1	0	0	0	0	0
KIR3DL3	115653	bcgsc.ca	37	19	55239272	55239272	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	161	11	248	0	0	0	0	0	0
KIR2DL4	3805	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	19	55324637	55324637	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	63	25	57	0	0	0	0	0	0
KIR3DL2	3812	bcgsc.ca	37	19	55377853	55377853	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	167	8	203	0	1	1	0	0	0
SYT5	6861	ucsc.edu	37	19	55686675	55686675	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	43	0	0	0	0	0	0
ZNF805	390980	ucsc.edu	37	19	57765082	57765082	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	46	6	82	0	5	4	0	0	1
FKBP1AP1	2282	ucsc.edu	37	19	58337994	58337994	+	RNA	SNP	C	C	A	rs142475890	by1000genomes;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	5	61	0	0	0	0	0	0
KCNF1	3754	ucsc.edu	37	2	11052767	11052767	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	68	0	0	0	0	0	0
FAM49A	81553	bcgsc.ca	37	2	16746919	16746919	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	226	10	231	0	0	0	0	0	0
WDR35	57539	bcgsc.ca	37	2	20135332	20135332	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	110	7	82	0	10	10	0	0	0
ITSN2	50618	bcgsc.ca	37	2	24433755	24433755	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	93	7	105	0	9	9	0	0	0
GPR113	165082	bcgsc.ca	37	2	26534228	26534228	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	86	8	120	1	1	1	0	0	0
OTOF	9381	ucsc.edu	37	2	26702456	26702456	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	73	7	92	0	0	0	0	0	0
IFT172	26160	bcgsc.ca	37	2	27683906	27683906	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	218	9	240	0	15	15	0	0	0
FOSL2	2355	ucsc.edu;bcgsc.ca	37	2	28634919	28634919	+	Silent	SNP	C	C	A	rs146012402	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	80	9	111	0	96	94	0	0	2
DYSF	8291	ucsc.edu	37	2	71838412	71838412	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	56	0	14	14	0	0	0
TET3	200424	ucsc.edu	37	2	74320782	74320782	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	5	79	0	0	0	0	0	0
INO80B	83444	ucsc.edu;bcgsc.ca	37	2	74685003	74685003	+	RNA	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	63	7	94	0	24	24	0	0	0
RETSAT	54884	ucsc.edu	37	2	85570832	85570832	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	66	0	82	82	0	0	0
RMND5A	64795	bcgsc.ca	37	2	86993116	86993116	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	189	11	194	0	19	19	0	0	0
SMYD1	150572	ucsc.edu;bcgsc.ca	37	2	88387485	88387485	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	66	7	98	0	0	0	0	0	0
LOC285033	0	bcgsc.ca	37	2	96906222	96906222	+	RNA	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	106	8	109	0	2	2	0	0	0
FAM178B	51252	ucsc.edu	37	2	97542025	97542025	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	5	42	0	0	0	0	0	0
INPP4A	3631	ucsc.edu	37	2	99175956	99175956	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	51	5	50	0	0	0	0	0	0
INPP4A	3631	ucsc.edu	37	2	99181108	99181108	+	Silent	SNP	C	C	A	rs111489045	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	4	43	0	0	0	0	0	0
RNF149	284996	ucsc.edu	37	2	101893717	101893717	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	46	0	44	44	0	0	0
MAP4K4	9448	ucsc.edu	37	2	102448266	102448266	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	28	0	50	50	0	0	0
ANAPC1	64682	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	112608404	112608404	+	Silent	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	131	28	118	0	16	11	5	0	0
CLASP1	23332	ucsc.edu	37	2	122120775	122120775	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	41	0	20	20	0	0	0
MYO7B	4648	ucsc.edu	37	2	128324382	128324382	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	57	0	3	3	0	0	0
AMER3	205147	ucsc.edu	37	2	131520642	131520642	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	61	6	88	0	0	0	0	0	0
RAB3GAP1	22930	bcgsc.ca	37	2	135883802	135883802	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	121	9	96	0	29	29	0	0	0
THSD7B	80731	ucsc.edu	37	2	138413101	138413101	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	25	4	30	0	0	0	0	0	0
LRP1B	53353	ucsc.edu;bcgsc.ca	37	2	141032122	141032122	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	84	8	60	0	0	0	0	0	0
LRP1B	53353	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	141762906	141762906	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	66	14	55	0	0	0	0	0	0
RIF1	55183	ucsc.edu	37	2	152315422	152315422	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	52	0	0	0	0	0	0
ERMN	57471	bcgsc.ca	37	2	158178158	158178158	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	181	10	194	0	0	0	0	0	0
UPP2	151531	bcgsc.ca	37	2	158971750	158971750	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	119	8	130	0	0	0	0	0	0
PKP4	8502	ucsc.edu;bcgsc.ca	37	2	159389786	159389786	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	45	6	48	1	24	24	0	0	0
PKP4	8502	ucsc.edu	37	2	159481729	159481729	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	60	0	109	109	0	0	0
FAP	2191	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	163074641	163074641	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	97	14	75	0	0	0	0	0	0
ATF2	1386	ucsc.edu	37	2	175983050	175983050	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	39	0	54	54	0	0	0
AGPS	8540	bcgsc.ca	37	2	178333174	178333174	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	152	9	122	0	35	35	0	0	0
TTN	7273	ucsc.edu	37	2	179477041	179477041	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	63	6	72	0	1	1	0	0	0
TTN	7273	ucsc.edu	37	2	179642236	179642236	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	45	5	49	0	0	0	0	0	0
CWC22	57703	bcgsc.ca	37	2	180815448	180815448	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	169	8	143	0	0	0	0	0	0
ITGA4	3676	bcgsc.ca	37	2	182360119	182360119	+	Missense_Mutation	SNP	G	G	T	rs200123017	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	195	10	148	0	9	9	0	0	0
CERKL	375298	ucsc.edu	37	2	182468731	182468731	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	37	0	5	5	0	0	0
COL5A2	1290	ucsc.edu	37	2	189916189	189916189	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	50	0	32	32	0	0	0
ABI2	10152	bcgsc.ca	37	2	204193288	204193288	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	8	52	0	18	18	0	0	0
NRP2	8828	ucsc.edu	37	2	206590749	206590749	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	58	6	60	0	24	24	0	0	0
EEF1B2	1933	broad.mit.edu	37	2	207025358	207025358	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	129	4	121	0	1026	1022	2	2	0
ABCA12	26154	ucsc.edu	37	2	215852509	215852509	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	33	0	0	0	0	0	0
TNS1	7145	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	218678433	218678433	+	Silent	SNP	T	T	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	92	10	131	0	112	83	29	0	0
TNS1	7145	ucsc.edu	37	2	218759760	218759760	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	5	27	0	61	61	0	0	0
CCDC108	255101	ucsc.edu	37	2	219890770	219890770	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	47	6	72	0	2	2	0	0	0
IHH	3549	ucsc.edu	37	2	219920490	219920490	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	79	0	0	0	0	0	0
FAM134A	79137	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	220047044	220047044	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	183	40	251	1	199	138	61	0	0
TUBA4B	80086	ucsc.edu	37	2	220136710	220136710	+	RNA	SNP	C	C	A	rs111350703	bycluster	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	51	5	58	0	4	4	0	0	0
GMPPA	29926	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	220370077	220370077	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	120	22	142	0	1	1	0	0	0
COL4A3	1285	bcgsc.ca	37	2	228149025	228149025	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	79	7	93	0	4	4	0	0	0
TRIP12	9320	ucsc.edu	37	2	230693996	230693996	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	5	61	0	0	0	0	0	0
HDAC4	9759	ucsc.edu	37	2	240002886	240002886	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	30	0	0	0	0	0	0
HDAC4	9759	ucsc.edu	37	2	240056024	240056024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	51	0	9	9	0	0	0
CAPN10	11132	ucsc.edu	37	2	241536256	241536256	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	67	0	19	19	0	0	0
FARP2	9855	ucsc.edu	37	2	242403323	242403323	+	Silent	SNP	C	C	A	rs201073477	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	48	0	0	0	0	0	0
NEU4	129807	ucsc.edu	37	2	242757832	242757832	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	33	0	1	1	0	0	0
LZTS3	0	ucsc.edu	37	20	3146311	3146311	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	4	25	0	19	19	0	0	0
LZTS3	0	ucsc.edu	37	20	3146567	3146567	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	5	59	0	34	34	0	0	0
KIF16B	55614	bcgsc.ca	37	20	16492085	16492085	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	170	10	94	0	13	13	0	0	0
BFSP1	631	bcgsc.ca	37	20	17479573	17479573	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	134	8	120	0	2	2	0	0	0
SLC24A3	57419	ucsc.edu	37	20	19261602	19261602	+	Splice_Site	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	29	0	0	0	0	0	0
BPIFB1	92747	bcgsc.ca	37	20	31890857	31890857	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	140	7	143	0	0	0	0	0	0
AHCY	191	hgsc.bcm.edu	37	20	32878689	32878689	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	92	6	92	1	201	201	0	0	0
UQCC	55245	bcgsc.ca	37	20	33891827	33891827	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	146	9	164	0	50	50	0	0	0
DLGAP4	22839	ucsc.edu	37	20	35128633	35128633	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	79	0	132	132	0	0	0
SOGA1	140710	ucsc.edu	37	20	35436970	35436970	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	21	0	3	3	0	0	0
SOGA1	140710	ucsc.edu	37	20	35437023	35437023	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	28	4	27	0	1	1	0	0	0
CHD6	84181	ucsc.edu	37	20	40034129	40034129	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	46	0	0	0	0	0	0
SEMG1	6406	ucsc.edu	37	20	43836509	43836509	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	59	6	71	0	0	0	0	0	0
PIGT	51604	ucsc.edu	37	20	44050124	44050124	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	95	0	351	351	0	0	0
STAU1	6780	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	47741019	47741019	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	268	78	248	0	71	67	4	0	0
PTGIS	5740	ucsc.edu	37	20	48156107	48156107	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	45	0	0	0	0	0	0
CDH26	60437	ucsc.edu	37	20	58560178	58560178	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	70	0	0	0	0	0	0
ADRM1	11047	ucsc.edu	37	20	60882806	60882806	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	38	0	256	255	0	1	0
LAMA5	3911	ucsc.edu	37	20	60895642	60895642	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	34	0	55	55	0	0	0
DIDO1	11083	bcgsc.ca	37	20	61522481	61522481	+	Silent	SNP	G	G	T	rs199767077	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	117	8	111	0	10	10	0	0	0
COL20A1	57642	ucsc.edu	37	20	61950473	61950473	+	Silent	SNP	C	C	A	rs202207738	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	63	0	0	0	0	0	0
HELZ2	85441	ucsc.edu	37	20	62195149	62195149	+	Missense_Mutation	SNP	G	G	T	rs141999472	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	21	4	17	0	9	9	0	0	0
HELZ2	85441	ucsc.edu	37	20	62199772	62199772	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	48	0	9	9	0	0	0
LIME1	54923	ucsc.edu	37	20	62370024	62370024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	51	0	56	56	0	0	0
MYT1	4661	bcgsc.ca	37	20	62867947	62867947	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	114	8	97	0	0	0	0	0	0
LTN1	26046	ucsc.edu	37	21	30365148	30365148	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	49	0	12	12	0	0	0
MRAP	56246	bcgsc.ca	37	21	33671357	33671357	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	92	8	94	0	0	0	0	0	0
DOPEY2	9980	ucsc.edu	37	21	37661381	37661381	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	61	6	89	1	15	15	0	0	0
CBS	875	ucsc.edu;bcgsc.ca	37	21	44485564	44485564	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	48	6	52	0	17	17	0	0	0
COL6A1	1291	ucsc.edu	37	21	47423445	47423445	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	74	0	272	271	0	1	0
CECR1	51816	bcgsc.ca	37	22	17688128	17688128	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	122	8	131	0	66	66	0	0	0
CECR2	27443	ucsc.edu;bcgsc.ca	37	22	18022266	18022266	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	67	8	92	0	1	1	0	0	0
CECR2	27443	ucsc.edu	37	22	18028398	18028398	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	4	30	0	0	0	0	0	0
DGCR6L	85359	ucsc.edu	37	22	20302895	20302895	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	5	43	0	158	158	0	0	0
ZNF74	7625	ucsc.edu	37	22	20761210	20761210	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	51	5	51	0	23	23	0	0	0
PI4KA	5297	ucsc.edu	37	22	21105592	21105592	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	50	0	0	0	0	0	0
RGL4	266747	ucsc.edu	37	22	24038849	24038849	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	56	1	1	1	0	0	0
TFIP11	24144	ucsc.edu;bcgsc.ca	37	22	26906153	26906153	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	101	11	138	0	31	31	0	0	0
CRYBA4	1413	bcgsc.ca	37	22	27019225	27019225	+	Missense_Mutation	SNP	C	C	A	rs200980598	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	139	9	204	1	0	0	0	0	0
CCDC157	550631	ucsc.edu;bcgsc.ca	37	22	30771624	30771624	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	6	48	0	4	4	0	0	0
SELM	0	ucsc.edu	37	22	31501203	31501203	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	26	4	29	0	0	0	0	0	0
SELM	0	bcgsc.ca	37	22	31501945	31501945	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	79	6	140	0	6	6	0	0	0
INPP5J	27124	ucsc.edu	37	22	31523510	31523510	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	25	4	40	0	0	0	0	0	0
DEPDC5	9681	ucsc.edu	37	22	32302245	32302245	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	6	94	0	12	12	0	0	0
C22orf28	51493	bcgsc.ca	37	22	32789954	32789954	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	177	9	184	0	103	103	0	0	0
NCF4	4689	ucsc.edu	37	22	37273708	37273708	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	69	1	57	57	0	0	0
KCTD17	79734	ucsc.edu	37	22	37453437	37453437	+	Splice_Site	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	26	4	55	0	0	0	0	0	0
SH3BP1	23616	bcgsc.ca	37	22	38049875	38049875	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	45	6	50	0	1	1	0	0	0
MICALL1	85377	ucsc.edu	37	22	38321748	38321748	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	22	4	45	0	30	30	0	0	0
KCNJ4	3761	ucsc.edu	37	22	38823295	38823295	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	40	0	1	1	0	0	0
SMDT1	0	ucsc.edu	37	22	42475836	42475836	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	74	4	102	0	103	91	12	0	0
PRR5	55615	ucsc.edu	37	22	45128230	45128230	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	5	63	0	18	18	0	0	0
BRD1	23774	ucsc.edu	37	22	50217236	50217236	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	42	0	22	22	0	0	0
IL17REL	400935	ucsc.edu	37	22	50435484	50435484	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	16	4	17	0	0	0	0	0	0
HDAC10	83933	bcgsc.ca	37	22	50685109	50685109	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	155	8	156	0	0	0	0	0	0
ARSA	410	ucsc.edu	37	22	51065068	51065068	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	4	54	0	58	58	0	0	0
SETD5	55209	ucsc.edu	37	3	9476520	9476520	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	31	0	2	2	0	0	0
SETD5	55209	ucsc.edu	37	3	9512467	9512467	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	6	41	0	33	33	0	0	0
CPNE9	151835	bcgsc.ca	37	3	9756630	9756630	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	107	7	94	0	0	0	0	0	0
OGG1	4968	ucsc.edu	37	3	9792855	9792855	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	5	53	0	40	40	0	0	0
CAMK1	8536	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	9801228	9801228	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	204	42	250	0	78	57	21	0	0
CAPN7	23473	ucsc.edu	37	3	15283758	15283758	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	24	0	1	1	0	0	0
KAT2B	8850	bcgsc.ca	37	3	20181816	20181816	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	100	9	83	0	7	7	0	0	0
OSBPL10	114884	ucsc.edu	37	3	31712452	31712452	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	5	69	1	52	51	0	0	1
GPD1L	23171	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	32169609	32169609	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	9	50	0	7	3	4	0	0
MLH1	4292	bcgsc.ca	37	3	37035064	37035064	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	137	9	138	0	14	14	0	0	0
PLCD1	5333	broad.mit.edu;bcgsc.ca	37	3	38051199	38051201	+	In_Frame_Del	DEL	TCG	TCG	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	TCG	TCG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	9	42	0	0	0	0	0	0
ZNF619	285267	bcgsc.ca	37	3	40529241	40529241	+	Missense_Mutation	SNP	C	C	A	rs150255236	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	126	8	124	0	3	3	0	0	0
CCDC13	152206	ucsc.edu	37	3	42750619	42750619	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	5	62	1	1	1	0	0	0
CCBP2	1238	bcgsc.ca	37	3	42906734	42906734	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	192	9	231	0	1	1	0	0	0
LARS2-AS1	100885795	bcgsc.ca	37	3	45533002	45533002	+	RNA	SNP	C	C	A	rs201265108	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	70	9	99	0	0	0	0	0	0
PLXNB1	5364	ucsc.edu	37	3	48448231	48448231	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	17	4	22	0	0	0	0	0	0
COL7A1	1294	ucsc.edu	37	3	48613168	48613168	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	103	0	7	7	0	0	0
COL7A1	1294	bcgsc.ca	37	3	48631056	48631056	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	140	9	224	0	1	1	0	0	0
RAD54L2	23132	ucsc.edu	37	3	51679720	51679720	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	29	0	3	3	0	0	0
BAP1	8314	ucsc.edu	37	3	52437733	52437733	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	47	0	59	59	0	0	0
STAB1	23166	ucsc.edu	37	3	52537076	52537076	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	4	23	0	18	18	0	0	0
ITIH3	3699	ucsc.edu	37	3	52836361	52836361	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	84	0	7	7	0	0	0
ACTR8	93973	ucsc.edu	37	3	53907103	53907103	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	27	4	47	0	51	51	0	0	0
MAGI1	9223	bcgsc.ca	37	3	65433729	65433729	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	135	10	157	0	0	0	0	0	0
NXPE3	91775	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	101540473	101540473	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	64	11	85	0	28	20	8	0	0
MYH15	22989	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	108107907	108107918	+	In_Frame_Del	DEL	TTCCAGTTCACG	TTCCAGTTCACG	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	TTCCAGTTCACG	TTCCAGTTCACG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	136	21	242	0	0	0	0	0	0
DZIP3	9666	ucsc.edu	37	3	108407566	108407566	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	49	0	25	25	0	0	0
TMPRSS7	344805	bcgsc.ca	37	3	111795771	111795771	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	219	11	237	2	0	0	0	0	0
C3orf52	79669	bcgsc.ca	37	3	111812215	111812215	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	106	8	83	0	0	0	0	0	0
BOC	91653	ucsc.edu	37	3	112993398	112993398	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	73	0	1	1	0	0	0
ARHGAP31	57514	ucsc.edu;bcgsc.ca	37	3	119128397	119128397	+	Missense_Mutation	SNP	C	C	A	rs61744178	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	5	62	0	31	31	0	0	0
POLQ	10721	ucsc.edu	37	3	121208971	121208971	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	40	0	0	0	0	0	0
POLQ	10721	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	121260288	121260288	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	448	78	380	0	0	0	0	0	0
PARP14	54625	bcgsc.ca	37	3	122437460	122437460	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	325	15	275	2	54	53	1	0	0
SEC22A	26984	broad.mit.edu	37	3	122978380	122978380	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	8	40	0	0	0	0	0	0
KALRN	8997	ucsc.edu	37	3	124160808	124160808	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	57	1	1	1	0	0	0
KALRN	8997	bcgsc.ca	37	3	124398348	124398348	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	245	11	206	0	0	0	0	0	0
OSBPL11	114885	bcgsc.ca	37	3	125282593	125282593	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	118	7	139	0	17	17	0	0	0
LOC653712	0	bcgsc.ca	37	3	128588464	128588464	+	RNA	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	19	5	30	0	1	1	0	0	0
COL6A6	131873	ucsc.edu	37	3	130289997	130289997	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	66	0	0	0	0	0	0
DNAJC13	23317	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	132207161	132207161	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	69	14	67	0	23	14	9	0	0
TMEM108	66000	ucsc.edu	37	3	133099475	133099475	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	62	0	4	4	0	0	0
ATR	545	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	142284995	142284995	+	Missense_Mutation	SNP	C	C	T	rs200407265	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	111	23	98	0	10	4	6	0	0
MED12L	116931	ucsc.edu	37	3	151086012	151086012	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	59	6	63	1	1	1	0	0	0
SMC4	10051	bcgsc.ca	37	3	160119769	160119769	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	233	10	231	1	4	4	0	0	0
GHSR	2693	ucsc.edu	37	3	172163208	172163208	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	55	0	0	0	0	0	0
LAMP3	27074	bcgsc.ca	37	3	182870222	182870222	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	389	17	354	0	2	2	0	0	0
HTR3D	200909	bcgsc.ca	37	3	183754321	183754321	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	98	8	100	0	0	0	0	0	0
ALG3	10195	ucsc.edu	37	3	183961383	183961383	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	51	0	133	133	0	0	0
EIF4G1	1981	ucsc.edu	37	3	184038756	184038756	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	49	0	104	104	0	0	0
VPS8	23355	ucsc.edu	37	3	184557509	184557509	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	31	0	10	10	0	0	0
EHHADH	1962	ucsc.edu	37	3	184947257	184947257	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	49	0	49	49	0	0	0
LRRC15	131578	ucsc.edu	37	3	194080631	194080631	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	54	5	74	0	0	0	0	0	0
ACAP2	23527	bcgsc.ca	37	3	195022323	195022323	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	105	9	82	0	18	18	0	0	0
FYTTD1	84248	ucsc.edu	37	3	197503869	197503869	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	60	6	55	0	0	0	0	0	0
DGKQ	1609	ucsc.edu	37	4	962669	962669	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	41	0	9	9	0	0	0
POLN	353497	bcgsc.ca	37	4	2130953	2130953	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	117	8	107	0	1	1	0	0	0
HGFAC	3083	ucsc.edu	37	4	3451122	3451122	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	69	0	2	2	0	0	0
STK32B	55351	ucsc.edu	37	4	5500781	5500781	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	50	0	22	22	0	0	0
WDR1	9948	ucsc.edu	37	4	10090323	10090323	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	23	2	21	0	273	207	66	0	0
BOD1L1	259282	broad.mit.edu	37	4	13603393	13603393	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	309	10	277	0	14	14	0	0	0
TAPT1	202018	ucsc.edu	37	4	16193029	16193029	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	25	5	27	0	12	12	0	0	0
STIM2	57620	bcgsc.ca	37	4	27010623	27010623	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	110	11	108	0	0	0	0	0	0
C4orf19	55286	ucsc.edu	37	4	37592329	37592329	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	5	61	0	9	9	0	0	0
N4BP2	55728	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	40122682	40122682	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	58	9	70	0	0	0	0	0	0
NUP54	53371	bcgsc.ca	37	4	77065384	77065384	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	486	16	484	0	11	11	0	0	0
SCD5	79966	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	83557889	83557889	+	Silent	SNP	G	G	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	45	9	85	0	13	7	6	0	0
DMP1	1758	broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	88584223	88584223	+	Silent	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	11	69	0	0	0	0	0	0
ABCG2	9429	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	89034494	89034494	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	187	33	211	1	3	3	0	0	0
SMARCAD1	56916	ucsc.edu	37	4	95186057	95186057	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	25	4	29	0	0	0	0	0	0
LAMTOR3	8649	ucsc.edu	37	4	100808471	100808471	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	4	20	0	59	59	0	0	0
ANK2	287	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	4	114195785	114195785	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	69	12	85	0	0	0	0	0	0
ANK2	287	bcgsc.ca	37	4	114275746	114275746	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	196	10	230	0	0	0	0	0	0
CLGN	1047	ucsc.edu	37	4	141327107	141327107	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	47	5	40	0	0	0	0	0	0
RPS3A	6189	ucsc.edu	37	4	152024120	152024120	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	30	0	3740	3734	3	3	0
KIAA0922	23240	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	154557454	154557454	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	208	24	230	0	0	0	0	0	0
ASIC5	51802	ucsc.edu	37	4	156751038	156751038	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	51	5	37	0	0	0	0	0	0
GRIA2	2891	ucsc.edu	37	4	158238837	158238837	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	19	0	0	0	0	0	0
FNIP2	57600	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	159756556	159756556	+	Splice_Site	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	298	56	305	0	0	0	0	0	0
FSTL5	56884	bcgsc.ca	37	4	162307171	162307171	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	125	7	130	0	0	0	0	0	0
NPY1R	4886	ucsc.edu	37	4	164247071	164247071	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	38	0	42	42	0	0	0
SH3RF1	57630	ucsc.edu	37	4	170043324	170043324	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	5	49	0	18	18	0	0	0
LOC285501	0	bcgsc.ca	37	4	178881979	178881979	+	RNA	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	133	8	100	0	0	0	0	0	0
FAT1	2195	bcgsc.ca	37	4	187628522	187628522	+	Silent	SNP	G	G	T	rs202148368	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	222	10	231	1	33	33	0	0	0
TERT	7015	ucsc.edu	37	5	1264576	1264576	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	4	79	0	0	0	0	0	0
FBXL7	23194	ucsc.edu	37	5	15936934	15936934	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	4	29	0	17	17	0	0	0
PDZD2	23037	ucsc.edu;bcgsc.ca	37	5	32061204	32061204	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	58	6	75	0	0	0	0	0	0
LIFR	3977	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	38489203	38489203	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	109	26	96	0	4	1	3	0	0
HCN1	348980	ucsc.edu	37	5	45262520	45262520	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	27	4	47	0	0	0	0	0	0
PDE4D	5144	ucsc.edu	37	5	58287702	58287702	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	5	53	1	21	21	0	0	0
HTR1A	3350	bcgsc.ca	37	5	63256860	63256860	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	111	7	141	0	0	0	0	0	0
BDP1	55814	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	70837317	70837317	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	184	33	179	1	7	4	3	0	0
FCHO2	115548	ucsc.edu	37	5	72359713	72359713	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	5	59	0	80	80	0	0	0
NSA2	10412	bcgsc.ca	37	5	74066455	74066455	+	Splice_Site	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	104	8	97	0	0	0	0	0	0
CCNH	902	bcgsc.ca	37	5	86703929	86703929	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	104	7	88	0	47	47	0	0	0
TSSK1B	83942	ucsc.edu	37	5	112769471	112769471	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	54	0	1	1	0	0	0
DMXL1	1657	bcgsc.ca	37	5	118456725	118456725	+	Silent	SNP	G	G	T	rs201572406	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	123	10	111	0	18	18	0	0	0
FBN2	2201	ucsc.edu	37	5	127647055	127647055	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	5	39	0	2	2	0	0	0
CDC25C	995	bcgsc.ca	37	5	137627777	137627777	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	229	11	263	0	0	0	0	0	0
PCDHA10	56139	ucsc.edu	37	5	140237249	140237249	+	Missense_Mutation	SNP	G	G	T	rs201104305	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	60	6	89	0	4	4	0	0	0
PCDHB6	56130	ucsc.edu	37	5	140531445	140531445	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	113	3	167	6	23	14	9	0	0
PCDHB14	56122	ucsc.edu	37	5	140603651	140603651	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	55	5	81	0	2	2	0	0	0
PCDHGC4	56098	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	140864817	140864817	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	86	15	117	0	0	0	0	0	0
GRXCR2	643226	ucsc.edu	37	5	145239474	145239474	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	48	0	0	0	0	0	0
FBXO38	81545	bcgsc.ca	37	5	147785873	147785873	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	126	8	106	1	16	16	0	0	0
AFAP1L1	134265	ucsc.edu	37	5	148695477	148695477	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	27	4	59	1	0	0	0	0	0
CAMK2A	815	bcgsc.ca	37	5	149630369	149630369	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	79	8	127	0	0	0	0	0	0
SYNPO	11346	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	150027927	150027927	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	92	24	135	0	0	0	0	0	0
SPARC	6678	ucsc.edu	37	5	151046044	151046044	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	4	63	0	1059	1058	1	0	0
LOC643201	0	ucsc.edu	37	5	175581879	175581879	+	RNA	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	16	4	31	0	0	0	0	0	0
CLTB	1212	bcgsc.ca	37	5	175824700	175824700	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	224	11	257	0	151	151	0	0	0
LMAN2	10960	ucsc.edu	37	5	176764420	176764420	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	21	4	44	0	373	373	0	0	0
TBC1D9B	23061	ucsc.edu	37	5	179305358	179305358	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	37	0	116	116	0	0	0
TBC1D9B	23061	bcgsc.ca	37	5	179315141	179315141	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	207	10	293	0	139	139	0	0	0
OR2V1	26693	bcgsc.ca	37	5	180552257	180552257	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	53	6	77	0	0	0	0	0	0
IRF4	3662	ucsc.edu	37	6	401618	401618	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	53	0	3	3	0	0	0
PIP5K1P1	206426	ucsc.edu	37	6	7986932	7986932	+	RNA	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	40	0	0	0	0	0	0
GPLD1	2822	ucsc.edu	37	6	24489717	24489717	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	65	0	0	0	0	0	0
ABT1	29777	ucsc.edu	37	6	26598855	26598855	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	54	0	18	18	0	0	0
OR2J3	442186	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	29079815	29079815	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	269	53	337	0	0	0	0	0	0
HLA-L	3139	ucsc.edu	37	6	30227709	30227709	+	RNA	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	47	0	0	0	0	0	0
PPP1R10	5514	bcgsc.ca	37	6	30573708	30573708	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	553	18	580	3	0	0	0	0	0
DDR1	780	ucsc.edu	37	6	30856494	30856494	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	43	0	365	365	0	0	0
PRRC2A	7916	bcgsc.ca	37	6	31595837	31595837	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	161	9	249	0	130	129	1	0	0
VWA7	80737	ucsc.edu	37	6	31734391	31734391	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	66	0	11	11	0	0	0
BTNL2	56244	bcgsc.ca	37	6	32362551	32362551	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	107	7	133	1	0	0	0	0	0
VPS52	6293	bcgsc.ca	37	6	33236844	33236844	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	141	10	219	0	60	60	0	0	0
WDR46	9277	ucsc.edu	37	6	33247613	33247613	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	52	0	49	49	0	0	0
ZBTB22	9278	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	33284668	33284668	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	47	10	82	0	15	9	6	0	0
ITPR3	3710	ucsc.edu	37	6	33632738	33632738	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	58	1	0	0	0	0	0
RPS10	6204	ucsc.edu	37	6	34385288	34385288	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	5	64	0	480	480	0	0	0
UBR2	23304	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	42559909	42559909	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	78	11	89	0	18	12	6	0	0
PEX6	5190	bcgsc.ca	37	6	42933787	42933787	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	223	10	266	0	1	1	0	0	0
MRPL2	51069	bcgsc.ca	37	6	43023899	43023899	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	132	8	156	0	102	102	0	0	0
VEGFA	7422	ucsc.edu	37	6	43745259	43745259	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	71	0	21	21	0	0	0
SLC35B2	347734	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	44222677	44222677	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	6	47	0	78	48	30	0	0
GPR116	221395	ucsc.edu;bcgsc.ca	37	6	46830808	46830808	+	Silent	SNP	G	G	T	rs139946395	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	79	8	86	0	21	21	0	0	0
ICK	22858	ucsc.edu	37	6	52897331	52897331	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	54	6	48	0	0	0	0	0	0
COL21A1	81578	ucsc.edu	37	6	55935556	55935556	+	Missense_Mutation	SNP	G	G	T	rs199910287	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	21	0	0	0	0	0	0
MYO6	4646	ucsc.edu	37	6	76564977	76564977	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	5	37	0	23	23	0	0	0
UBE3D	90025	ucsc.edu;bcgsc.ca	37	6	83728805	83728805	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	69	10	53	0	1	1	0	0	0
PRSS35	167681	ucsc.edu	37	6	84233932	84233932	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	76	0	1	1	0	0	0
SNAP91	9892	ucsc.edu	37	6	84368747	84368747	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	4	33	0	0	0	0	0	0
ZNF292	23036	ucsc.edu	37	6	87965892	87965892	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	58	0	5	5	0	0	0
MDN1	23195	ucsc.edu	37	6	90390346	90390346	+	Missense_Mutation	SNP	G	G	T	rs145940827	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	73	0	8	8	0	0	0
SEC63	11231	bcgsc.ca	37	6	108246113	108246113	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	108	8	100	0	42	42	0	0	0
AKD1	221264	ucsc.edu	37	6	109995465	109995465	+	Splice_Site	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	22	4	35	0	0	0	0	0	0
REV3L	5980	bcgsc.ca	37	6	111697073	111697073	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	80	7	76	0	6	6	0	0	0
ASF1A	25842	bcgsc.ca	37	6	119226891	119226891	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	285	12	235	0	23	23	0	0	0
NCOA7	135112	bcgsc.ca	37	6	126211950	126211950	+	Missense_Mutation	SNP	G	G	T	rs141809767	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	94	9	78	0	0	0	0	0	0
NCOA7	135112	bcgsc.ca	37	6	126236518	126236518	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	106	8	142	1	30	30	0	0	0
EPB41L2	2037	bcgsc.ca	37	6	131190838	131190838	+	Silent	SNP	G	G	T	rs17059736	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	399	14	457	1	153	153	0	0	0
TAAR9	134860	bcgsc.ca	37	6	132859938	132859938	+	RNA	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	177	9	175	0	0	0	0	0	0
SLC35D3	340146	ucsc.edu	37	6	137245282	137245282	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	43	0	0	0	0	0	0
UTRN	7402	ucsc.edu	37	6	144852253	144852253	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	57	6	45	0	34	34	0	0	0
RGS17	26575	bcgsc.ca	37	6	153347642	153347642	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	204	10	190	0	1	1	0	0	0
TULP4	56995	ucsc.edu	37	6	158925002	158925002	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	31	0	7	7	0	0	0
FRMD1	79981	ucsc.edu	37	6	168465666	168465666	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	67	0	1	1	0	0	0
LFNG	3955	ucsc.edu	37	7	2566799	2566799	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	5	67	0	49	49	0	0	0
TTYH3	80727	broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	2691878	2691878	+	Splice_Site	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	6	55	0	1	1	0	0	0
ACTB	60	bcgsc.ca	37	7	5568097	5568097	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	122	7	135	0	7588	7569	4	4	11
ZDHHC4	55146	bcgsc.ca	37	7	6621766	6621766	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	303	13	277	1	134	134	0	0	0
GPNMB	10457	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	23313792	23313792	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	109	17	104	1	3046	2994	49	0	3
HIBADH	11112	bcgsc.ca	37	7	27669024	27669024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	191	10	166	1	114	114	0	0	0
CHN2	1124	ucsc.edu	37	7	29519830	29519830	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	37	0	1	1	0	0	0
MYL7	58498	ucsc.edu	37	7	44179411	44179411	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	34	0	0	0	0	0	0
NUDCD3	23386	bcgsc.ca	37	7	44425629	44425629	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	69	7	92	0	107	106	0	1	0
TPST1	8460	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	65705725	65705725	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	96	39	74	0	31	11	20	0	0
WBSCR17	64409	bcgsc.ca	37	7	71135089	71135089	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	379	15	334	0	0	0	0	0	0
SPDYE7P	441251	ucsc.edu	37	7	72333388	72333388	+	RNA	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	46	4	48	1	0	0	0	0	0
ELN	2006	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	73474279	73474279	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	376	128	408	1	16	12	4	0	0
LIMK1	3984	ucsc.edu	37	7	73511473	73511473	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	50	0	59	59	0	0	0
RHBDD2	57414	bcgsc.ca	37	7	75517657	75517657	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	116	10	162	0	206	206	0	0	0
MCM7	4176	ucsc.edu;bcgsc.ca	37	7	99690937	99690937	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	301	31	265	3	96	75	21	0	0
SPDYE3	441272	bcgsc.ca	37	7	99917255	99917255	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	112	7	189	0	21	20	0	0	1
C7orf61	402573	ucsc.edu	37	7	100054427	100054427	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	38	0	1	1	0	0	0
NYAP1	222950	ucsc.edu	37	7	100084789	100084789	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	47	0	1	1	0	0	0
LRCH4	4034	ucsc.edu;bcgsc.ca	37	7	100179478	100179478	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	72	7	93	0	76	76	0	0	0
TRIM56	81844	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	100732355	100732355	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	166	43	217	2	20	10	10	0	0
MYL10	93408	ucsc.edu	37	7	101266284	101266284	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	46	0	0	0	0	0	0
DPY19L2P2	349152	ucsc.edu	37	7	102920433	102920433	+	RNA	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	17	4	36	0	10	10	0	0	0
MLL5	55904	bcgsc.ca	37	7	104681416	104681416	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	119	9	76	0	17	17	0	0	0
DLD	1738	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	107542828	107542828	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	97	31	75	0	0	0	0	0	0
NRCAM	4897	bcgsc.ca	37	7	107875075	107875075	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	188	9	155	1	8	8	0	0	0
DOCK4	9732	ucsc.edu	37	7	111517236	111517236	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	14	0	0	0	0	0	0
MET	4233	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	116417457	116417457	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	223	26	158	0	305	212	93	0	0
GPR37	2861	bcgsc.ca	37	7	124386690	124386690	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	127	7	142	0	6	6	0	0	0
RBM28	55131	bcgsc.ca	37	7	127963581	127963581	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	292	12	237	0	0	0	0	0	0
STRIP2	57464	hgsc.bcm.edu	37	7	129120722	129120722	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	102	6	118	0	0	0	0	0	0
FLJ40852	0	bcgsc.ca	37	7	141423980	141423980	+	RNA	DEL	T	T	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	90	26	67	0	0	0	0	0	0
ZNF786	136051	bcgsc.ca	37	7	148767851	148767851	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	152	8	182	0	6	6	0	0	0
DLGAP2	9228	broad.mit.edu	37	8	1497740	1497740	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	20	5	39	0	0	0	0	0	0
MCPH1	79648	ucsc.edu	37	8	6296611	6296611	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	26	0	0	0	0	0	0
MCPH1	79648	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	6302563	6302563	+	Silent	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	120	18	117	0	8	7	1	0	0
SOX7	83595	ucsc.edu;bcgsc.ca	37	8	10583558	10583558	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	5	58	0	3	3	0	0	0
CTSB	1508	ucsc.edu	37	8	11704607	11704607	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	70	0	5315	5314	0	0	1
FGL1	2267	ucsc.edu	37	8	17743028	17743028	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	5	70	0	0	0	0	0	0
XPO7	23039	bcgsc.ca	37	8	21839313	21839313	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	168	9	175	0	41	41	0	0	0
LGI3	203190	ucsc.edu	37	8	22006174	22006174	+	Silent	SNP	C	C	A	rs145677020	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	64	0	2	2	0	0	0
TNFRSF10D	8793	ucsc.edu	37	8	23021424	23021424	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	40	0	4	4	0	0	0
DOCK5	80005	ucsc.edu	37	8	25154120	25154120	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	23	4	36	0	1	1	0	0	0
DPYSL2	1808	bcgsc.ca	37	8	26509877	26509877	+	Silent	SNP	C	C	A	rs139997920	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	96	7	109	0	127	127	0	0	0
NRG1	3084	ucsc.edu	37	8	32611895	32611895	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	53	5	54	0	0	0	0	0	0
RNF122	79845	bcgsc.ca	37	8	33406379	33406379	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	202	10	278	1	0	0	0	0	0
TM2D2	83877	ucsc.edu	37	8	38853742	38853742	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	47	3	45	0	0	0	0	0	0
VDAC3	7419	ucsc.edu;bcgsc.ca	37	8	42262417	42262417	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	51	6	54	0	142	142	0	0	0
SLC20A2	6575	ucsc.edu	37	8	42287717	42287717	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	57	6	70	0	16	16	0	0	0
HGSNAT	138050	hgsc.bcm.edu;broad.mit.edu	37	8	43002092	43002092	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	28	5	27	0	0	0	0	0	0
PRKDC	5591	ucsc.edu	37	8	48775068	48775068	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	32	0	29	28	0	0	1
ST18	9705	hgsc.bcm.edu;bcgsc.ca	37	8	53092686	53092686	+	Silent	SNP	G	G	T	rs137908806	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	248	13	268	0	0	0	0	0	0
RP1	6101	ucsc.edu	37	8	55542001	55542001	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	46	0	0	0	0	0	0
NSMAF	8439	bcgsc.ca	37	8	59536303	59536303	+	Missense_Mutation	SNP	C	C	A	rs201097987	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	69	7	57	0	22	22	0	0	0
DNAJC5B	85479	ucsc.edu	37	8	66992699	66992699	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	57	0	22	21	0	0	1
E2F5	1875	ucsc.edu	37	8	86121562	86121562	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	59	0	8	8	0	0	0
MMP16	4325	bcgsc.ca	37	8	89339404	89339404	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	146	9	162	0	0	0	0	0	0
CALB1	793	bcgsc.ca	37	8	91081420	91081420	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	115	8	86	0	0	0	0	0	0
CDH17	1015	bcgsc.ca	37	8	95201492	95201492	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	98	8	98	0	0	0	0	0	0
RAD54B	25788	ucsc.edu	37	8	95390426	95390426	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	15	0	0	0	0	0	0
UBR5	51366	bcgsc.ca	37	8	103326078	103326078	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	216	11	193	0	16	16	0	0	0
COL14A1	7373	broad.mit.edu	37	8	121170484	121170484	+	Silent	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	79	3	64	0	0	0	0	0	0
ASAP1	50807	bcgsc.ca	37	8	131104294	131104294	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	176	14	197	0	34	34	0	0	0
ADCY8	114	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	131921969	131921969	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	337	67	372	0	0	0	0	0	0
ZFAT	57623	ucsc.edu	37	8	135614408	135614408	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	27	4	35	0	3	3	0	0	0
COL22A1	169044	ucsc.edu	37	8	139774709	139774709	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	5	62	0	0	0	0	0	0
GLI4	2738	ucsc.edu	37	8	144358696	144358696	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	4	52	0	9	9	0	0	0
NAPRT1	93100	broad.mit.edu	37	8	144659504	144659504	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	20	3	40	0	37	23	14	0	0
TIGD5	84948	ucsc.edu	37	8	144681976	144681976	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	67	0	25	25	0	0	0
FAM83H	286077	ucsc.edu	37	8	144809012	144809012	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	4	58	0	42	42	0	0	0
PUF60	22827	ucsc.edu	37	8	144899929	144899929	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	25	4	38	0	105	105	0	0	0
PLEC	5339	ucsc.edu	37	8	145003731	145003731	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	91	0	0	0	0	0	0
FREM1	158326	ucsc.edu	37	9	14819411	14819411	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	4	43	0	0	0	0	0	0
DENND4C	55667	broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	19369966	19369966	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	63	11	67	0	45	29	16	0	0
TEK	7010	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	27197591	27197591	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	38	8	44	0	0	0	0	0	0
TAF1L	138474	bcgsc.ca	37	9	32635434	32635434	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	111	9	146	0	0	0	0	0	0
KIF24	347240	ucsc.edu	37	9	34256983	34256983	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	5	58	0	1	1	0	0	0
KIAA1045	23349	bcgsc.ca	37	9	34976227	34976227	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	71	7	78	0	0	0	0	0	0
C9orf131	138724	bcgsc.ca	37	9	35044163	35044163	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	200	13	261	0	0	0	0	0	0
TESK1	7016	hgsc.bcm.edu	37	9	35609009	35609009	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	134	7	213	1	92	92	0	0	0
ZBTB5	9925	ucsc.edu	37	9	37440976	37440976	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	6	57	0	14	14	0	0	0
SMC5	23137	ucsc.edu	37	9	72959165	72959165	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	5	44	0	16	16	0	0	0
ZCCHC6	79670	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	88943326	88943326	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	232	48	253	0	10	9	1	0	0
SYK	6850	ucsc.edu	37	9	93606498	93606498	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	5	56	0	74	74	0	0	0
IARS	3376	bcgsc.ca	37	9	95036713	95036713	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	185	12	148	1	0	0	0	0	0
CCDC180	0	ucsc.edu	37	9	100092702	100092702	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	55	0	5	5	0	0	0
NANS	54187	bcgsc.ca	37	9	100823175	100823175	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	209	10	260	2	93	93	0	0	0
TAL2	6887	ucsc.edu	37	9	108424783	108424783	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	5	61	0	0	0	0	0	0
ACTL7A	10881	bcgsc.ca	37	9	111625892	111625892	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	96	8	99	0	0	0	0	0	0
KIAA0368	23392	ucsc.edu	37	9	114174351	114174351	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	26	5	23	0	30	30	0	0	0
KIAA1958	158405	ucsc.edu	37	9	115336625	115336625	+	Missense_Mutation	SNP	G	G	T	rs201572624	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	5	64	0	5	5	0	0	0
ZFP37	7539	broad.mit.edu;bcgsc.ca	37	9	115806495	115806495	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	190	27	158	0	0	0	0	0	0
TNC	3371	ucsc.edu	37	9	117848394	117848394	+	Missense_Mutation	SNP	C	C	A	rs1757095	byfrequency;alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	4	75	0	82	82	0	0	0
CDK5RAP2	55755	ucsc.edu	37	9	123166372	123166372	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	44	4	49	0	22	22	0	0	0
CDK5RAP2	55755	bcgsc.ca	37	9	123301395	123301395	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	165	8	210	0	14	14	0	0	0
OR1N1	138883	bcgsc.ca	37	9	125288660	125288670	+	Frame_Shift_Del	DEL	GACTGAAGAGC	GACTGAAGAGC	-	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	GACTGAAGAGC	GACTGAAGAGC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	78	4	82	0	0	0	0	0	0
LHX2	9355	ucsc.edu	37	9	126794856	126794856	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	52	0	0	0	0	0	0
DPM2	8818	ucsc.edu;bcgsc.ca	37	9	130699725	130699725	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	65	7	74	0	7	7	0	0	0
CRAT	1384	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	131864688	131864688	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	162	42	232	0	0	0	0	0	0
QRFP	347148	ucsc.edu	37	9	133769067	133769067	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	5	83	0	0	0	0	0	0
AK8	158067	ucsc.edu	37	9	135704067	135704067	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	37	4	29	0	8	8	0	0	0
SARDH	1757	ucsc.edu	37	9	136594898	136594898	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	46	5	102	0	0	0	0	0	0
BRD3	8019	ucsc.edu	37	9	136907007	136907007	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	51	0	3	3	0	0	0
UBAC1	10422	ucsc.edu	37	9	138845534	138845534	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	50	5	43	0	0	0	0	0	0
NDOR1	27158	ucsc.edu	37	9	140109097	140109097	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	67	0	10	10	0	0	0
NDOR1	27158	ucsc.edu	37	9	140110218	140110218	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	5	87	0	24	24	0	0	0
HDHD1	8226	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	7023838	7023838	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	33	12	34	0	6	1	5	0	0
PRPS2	5634	bcgsc.ca	37	X	12817472	12817472	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	125	7	125	0	29	29	0	0	0
NHS	4810	ucsc.edu	37	X	17746146	17746146	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	55	5	59	0	12	12	0	0	0
PHKA2	5256	ucsc.edu	37	X	18912449	18912449	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	63	0	21	21	0	0	0
MAGEB2	4113	ucsc.edu	37	X	30237369	30237369	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	29	4	34	0	0	0	0	0	0
FAM47A	158724	ucsc.edu	37	X	34150240	34150240	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	59	6	78	0	0	0	0	0	0
FAM47C	442444	ucsc.edu	37	X	37028641	37028641	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	75	0	0	0	0	0	0
BCOR	54880	ucsc.edu	37	X	39930905	39930905	+	Silent	SNP	G	G	T	rs190344757	alternate_allele	TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	18	0	7	7	0	0	0
DUSP21	63904	ucsc.edu	37	X	44703893	44703893	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	5	53	0	0	0	0	0	0
ZNF157	7712	ucsc.edu	37	X	47272281	47272281	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	18	4	26	0	0	0	0	0	0
CFP	5199	ucsc.edu	37	X	47486667	47486667	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	25	4	11	0	6	6	0	0	0
KDM5C	8242	ucsc.edu	37	X	53239876	53239876	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	17	4	20	0	33	33	0	0	0
WNK3	65267	ucsc.edu	37	X	54265505	54265505	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	42	0	1	1	0	0	0
UBQLN2	29978	ucsc.edu	37	X	56590537	56590537	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	24	4	27	0	20	20	0	0	0
AWAT1	158833	ucsc.edu	37	X	69459754	69459754	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	52	5	50	0	0	0	0	0	0
FOXO4	4303	ucsc.edu	37	X	70321411	70321411	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	4	71	0	18	18	0	0	0
NHSL2	340527	ucsc.edu	37	X	71359357	71359357	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	25	5	36	0	1	1	0	0	0
FTX	100302692	bcgsc.ca	37	X	73327020	73327020	+	RNA	SNP	T	T	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	6	4	19	0	0	0	0	0	0
UPRT	139596	ucsc.edu	37	X	74517357	74517357	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	40	4	44	0	9	9	0	0	0
BRWD3	254065	ucsc.edu	37	X	79932816	79932816	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	4	23	0	2	2	0	0	0
RPS6KA6	27330	ucsc.edu	37	X	83374893	83374893	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	35	4	47	0	0	0	0	0	0
PABPC5	140886	ucsc.edu	37	X	90691623	90691623	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	31	0	0	0	0	0	0
TCEAL2	140597	ucsc.edu	37	X	101381908	101381908	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	43	4	51	0	0	0	0	0	0
GPRASP1	9737	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	101910063	101910063	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	49	22	72	1	1	0	1	0	0
TEX13A	56157	ucsc.edu	37	X	104464364	104464364	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	34	4	54	0	0	0	0	0	0
SNORD96B	692226	ucsc.edu	37	X	109468218	109468218	+	RNA	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	27	0	0	0	0	0	0
TENM1	10178	ucsc.edu	37	X	123556169	123556169	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	60	7	67	0	2	2	0	0	0
ATP11C	286410	ucsc.edu	37	X	138897136	138897136	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	30	4	28	0	0	0	0	0	0
IDS	3423	ucsc.edu;bcgsc.ca	37	X	148568478	148568478	+	Silent	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	42	5	50	0	117	117	0	0	0
ZNF185	7739	ucsc.edu	37	X	152097203	152097203	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	36	4	45	0	0	0	0	0	0
SLC6A8	6535	ucsc.edu	37	X	152958759	152958759	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	41	4	83	0	57	57	0	0	0
FLNA	2316	ucsc.edu	37	X	153582284	153582284	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	39	4	51	0	0	0	0	0	0
EMD	2010	ucsc.edu	37	X	153608701	153608701	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	51	5	70	0	163	163	0	0	0
FAM50A	9130	ucsc.edu	37	X	153674170	153674170	+	Silent	SNP	C	C	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	31	4	38	0	0	0	0	0	0
LRRC27	80313	broad.mit.edu;bcgsc.ca	37	10	134144951	134144952	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	32	7	60	0	0	0	0	0	0
GIF	2694	broad.mit.edu;bcgsc.ca	37	11	59610051	59610052	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	55	9	68	0	0	0	0	0	0
INTS2	57508	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	59945081	59945082	+	In_Frame_Ins	INS	-	-	GAA	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	132	27	100	0	0	0	0	0	0
BCR	613	broad.mit.edu;bcgsc.ca	37	22	23523615	23523616	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	83	18	92	0	0	0	0	0	0
RPL24	6152	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	101401697	101401698	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	98	23	96	0	0	0	0	0	0
SLC7A14	57709	broad.mit.edu;bcgsc.ca	37	3	170201153	170201154	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	105	12	152	0	0	0	0	0	0
DSCAM	1826	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	21	41496201	41496202	+	Missense_Mutation	DNP	AA	AA	TG	novel		TCGA-DZ-6132-01A-11D-1961-08	TCGA-DZ-6132-11A-01D-1961-08	AA	AA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	be6d6e8a-236f-4a34-a19c-c7d6290d97f0	499ed479-d046-4343-9bd4-14b7201bdc55	163	26	207	0	0	0	0	0	0
