Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	TTotCov	TVarCov	NTotCov	NVarCov	Trna_tot	Trna_ref	Trna_var	Trna_alt1	Trna_alt2
NOC2L	26155	ucsc.edu	37	1	881909	881909	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	108	0	26	26	0	0	0
NOC2L	26155	ucsc.edu	37	1	887409	887409	+	Silent	SNP	G	G	T	rs113226136	bycluster;byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	91	0	24	24	0	0	0
AGRN	375790	ucsc.edu	37	1	957787	957787	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	189	0	139	139	0	0	0
TTLL10	254173	ucsc.edu	37	1	1117765	1117765	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	190	1	0	0	0	0	0
FAM132A	388581	ucsc.edu	37	1	1179654	1179654	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	4	76	0	0	0	0	0	0
ACAP3	116983	ucsc.edu	37	1	1231433	1231433	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	107	0	9	9	0	0	0
AURKAIP1	54998	ucsc.edu	37	1	1309219	1309219	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	55	6	110	1	53	53	0	0	0
NADK	65220	ucsc.edu	37	1	1687735	1687735	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	133	0	17	17	0	0	0
PANK4	55229	ucsc.edu	37	1	2452333	2452333	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	107	1	0	0	0	0	0
MMEL1	79258	ucsc.edu	37	1	2535671	2535671	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	168	0	0	0	0	0	0
PRDM16	63976	ucsc.edu	37	1	3328880	3328880	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	129	0	0	0	0	0	0
CHD5	26038	ucsc.edu;bcgsc.ca	37	1	6181589	6181589	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	18	5	30	0	2	2	0	0	0
RNF207	388591	ucsc.edu	37	1	6272386	6272386	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	127	1	2	2	0	0	0
PHF13	148479	ucsc.edu	37	1	6676905	6676905	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	75	0	0	0	0	0	0
PHF13	148479	ucsc.edu	37	1	6681626	6681626	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	120	0	8	8	0	0	0
DNAJC11	55735	ucsc.edu	37	1	6696296	6696296	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	95	0	0	0	0	0	0
PER3	8863	ucsc.edu	37	1	7887489	7887489	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	238	0	0	0	0	0	0
SLC2A7	155184	ucsc.edu	37	1	9067375	9067375	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	78	1	0	0	0	0	0
SLC25A33	84275	ucsc.edu	37	1	9633441	9633441	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	37	0	5	5	0	0	0
CLSTN1	22883	ucsc.edu	37	1	9801268	9801268	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	145	1	134	133	0	0	1
LZIC	84328	ucsc.edu	37	1	9991949	9991949	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	55	0	0	0	0	0	0
UBE4B	10277	ucsc.edu	37	1	10166496	10166496	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	204	0	0	0	0	0	0
KIF1B	23095	ucsc.edu	37	1	10327543	10327543	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	6	78	1	10	10	0	0	0
KIF1B	23095	ucsc.edu	37	1	10399894	10399894	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	72	0	3	3	0	0	0
KIF1B	23095	ucsc.edu	37	1	10408755	10408755	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	61	0	7	7	0	0	0
PGD	5226	ucsc.edu	37	1	10473289	10473289	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	80	0	43	43	0	0	0
APITD1-CORT	100526739	ucsc.edu	37	1	10511520	10511520	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	69	0	1	1	0	0	0
CASZ1	54897	ucsc.edu	37	1	10714269	10714269	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	147	0	0	0	0	0	0
EXOSC10	5394	ucsc.edu	37	1	11142902	11142902	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	112	0	7	7	0	0	0
PTCHD2	57540	ucsc.edu	37	1	11561092	11561092	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	120	0	0	0	0	0	0
PLOD1	5351	ucsc.edu	37	1	12014942	12014942	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	88	0	0	0	0	0	0
MFN2	9927	ucsc.edu	37	1	12069659	12069659	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	158	1	0	0	0	0	0
VPS13D	55187	ucsc.edu;bcgsc.ca	37	1	12348342	12348342	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	99	11	176	0	10	10	0	0	0
VPS13D	55187	ucsc.edu	37	1	12353753	12353753	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	74	0	0	0	0	0	0
CELA2A	63036	bcgsc.ca	37	1	15789355	15789355	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	112	10	222	2	0	0	0	0	0
DNAJC16	23341	ucsc.edu;bcgsc.ca	37	1	15888789	15888789	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	7	133	0	12	12	0	0	0
TMEM82	388595	ucsc.edu	37	1	16073492	16073492	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	106	0	40	40	0	0	0
SPEN	23013	ucsc.edu	37	1	16261891	16261891	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	113	0	11	11	0	0	0
SPEN	23013	ucsc.edu	37	1	16264440	16264440	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	120	0	18	18	0	0	0
EPHA2	1969	ucsc.edu	37	1	16455954	16455954	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	112	1	5	5	0	0	0
ARHGEF19	128272	ucsc.edu	37	1	16534579	16534579	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	101	0	1	1	0	0	0
RSG1	79363	ucsc.edu	37	1	16559118	16559118	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	87	0	6	6	0	0	0
ATP13A2	23400	ucsc.edu	37	1	17318996	17318996	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	211	0	0	0	0	0	0
PADI3	51702	ucsc.edu	37	1	17599919	17599919	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	72	1	1	1	0	0	0
PADI4	23569	ucsc.edu	37	1	17672575	17672575	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	86	0	0	0	0	0	0
RCC2	55920	ucsc.edu	37	1	17736541	17736541	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	73	0	0	0	0	0	0
ALDH4A1	8659	ucsc.edu	37	1	19199400	19199400	+	Missense_Mutation	SNP	G	G	T	rs72953172	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	170	0	25	25	0	0	0
UBR4	23352	ucsc.edu	37	1	19415330	19415330	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	123	0	43	43	0	0	0
UBR4	23352	bcgsc.ca	37	1	19439250	19439250	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	199	10	520	1	21	21	0	0	0
UBR4	23352	bcgsc.ca	37	1	19443749	19443749	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	124	8	311	0	16	16	0	0	0
UBR4	23352	ucsc.edu	37	1	19488328	19488328	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	69	0	0	0	0	0	0
PLA2G2D	26279	ucsc.edu	37	1	20442857	20442857	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	89	0	0	0	0	0	0
DDOST	1650	ucsc.edu	37	1	20981934	20981934	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	121	1	0	0	0	0	0
KIF17	57576	ucsc.edu	37	1	20998555	20998555	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	97	0	1	1	0	0	0
KIF17	57576	ucsc.edu	37	1	21014389	21014389	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	6	145	0	0	0	0	0	0
EIF4G3	8672	ucsc.edu	37	1	21307564	21307564	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	168	0	4	4	0	0	0
ALPL	249	ucsc.edu	37	1	21900166	21900166	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	35	0	0	0	0	0	0
ALPL	249	ucsc.edu	37	1	21902243	21902243	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	196	0	1	1	0	0	0
HSPG2	3339	ucsc.edu	37	1	22178625	22178625	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	108	0	12	12	0	0	0
CELA3A	10136	ucsc.edu	37	1	22332010	22332010	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	211	0	0	0	0	0	0
CDC42	998	ucsc.edu;bcgsc.ca	37	1	22405072	22405072	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	7	78	0	0	0	0	0	0
EPHA8	2046	ucsc.edu	37	1	22915778	22915778	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	5	107	0	0	0	0	0	0
EPHB2	2048	ucsc.edu	37	1	23238955	23238955	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	123	0	3	3	0	0	0
ASAP3	55616	ucsc.edu	37	1	23769117	23769117	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	14	4	29	0	0	0	0	0	0
GALE	2582	ucsc.edu	37	1	24124304	24124304	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	96	0	45	45	0	0	0
MYOM3	127294	ucsc.edu	37	1	24384030	24384030	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	71	0	43	43	0	0	0
IL22RA1	58985	ucsc.edu	37	1	24447530	24447530	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	122	1	4	4	0	0	0
GRHL3	57822	ucsc.edu	37	1	24668728	24668728	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	142	0	0	0	0	0	0
RCAN3	11123	ucsc.edu	37	1	24841003	24841003	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	102	0	11	11	0	0	0
SRRM1	10250	ucsc.edu	37	1	24981548	24981548	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	115	1	31	31	0	0	0
SRRM1	10250	ucsc.edu	37	1	24993366	24993366	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	82	0	56	56	0	0	0
MAN1C1	57134	ucsc.edu	37	1	26104719	26104719	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	83	0	1	1	0	0	0
PAQR7	164091	ucsc.edu	37	1	26189953	26189953	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	139	0	26	26	0	0	0
PAQR7	164091	ucsc.edu	37	1	26190034	26190034	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	95	0	24	24	0	0	0
AIM1L	55057	ucsc.edu	37	1	26671825	26671825	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	95	1	0	0	0	0	0
RPS6KA1	6195	ucsc.edu	37	1	26900651	26900651	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	135	0	50	50	0	0	0
ARID1A	8289	ucsc.edu	37	1	27106740	27106740	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	223	0	33	33	0	0	0
SLC9A1	6548	ucsc.edu	37	1	27428594	27428594	+	Silent	SNP	G	G	T	rs199786766	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	142	0	13	13	0	0	0
AHDC1	27245	ucsc.edu	37	1	27876719	27876719	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	157	0	9	9	0	0	0
FAM76A	199870	ucsc.edu;bcgsc.ca	37	1	28054012	28054012	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	6	51	0	2	2	0	0	0
PPP1R8	5511	ucsc.edu	37	1	28165298	28165298	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	91	0	6	6	0	0	0
SMPDL3B	27293	ucsc.edu	37	1	28282628	28282628	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	111	0	0	0	0	0	0
SMPDL3B	27293	ucsc.edu	37	1	28285122	28285122	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	111	0	5	5	0	0	0
XKR8	55113	ucsc.edu	37	1	28290011	28290011	+	Silent	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	86	0	0	0	0	0	0
MED18	54797	ucsc.edu	37	1	28661442	28661442	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	89	1	15	15	0	0	0
YTHDF2	51441	ucsc.edu;bcgsc.ca	37	1	29069107	29069107	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	75	9	233	0	11	11	0	0	0
SRSF4	6429	ucsc.edu	37	1	29485956	29485956	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	6	77	0	24	24	0	0	0
PTPRU	10076	ucsc.edu	37	1	29609235	29609235	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	100	1	17	17	0	0	0
PUM1	9698	bcgsc.ca	37	1	31479924	31479924	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	219	11	381	1	35	35	0	0	0
PEF1	553115	ucsc.edu	37	1	32098191	32098191	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	65	0	30	30	0	0	0
COL16A1	1307	ucsc.edu	37	1	32151692	32151692	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	137	1	0	0	0	0	0
COL16A1	1307	ucsc.edu	37	1	32151871	32151871	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	79	0	0	0	0	0	0
SPOCD1	90853	ucsc.edu	37	1	32259773	32259773	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	97	0	0	0	0	0	0
KPNA6	23633	ucsc.edu	37	1	32631818	32631818	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	48	0	0	0	0	0	0
IQCC	55721	ucsc.edu	37	1	32671844	32671844	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	173	1	3	3	0	0	0
IQCC	55721	ucsc.edu	37	1	32671877	32671877	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	139	0	4	4	0	0	0
LCK	3932	ucsc.edu	37	1	32740364	32740364	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	72	0	0	0	0	0	0
MARCKSL1	65108	ucsc.edu	37	1	32800407	32800407	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	121	0	23	23	0	0	0
RBBP4	5928	ucsc.edu	37	1	33133902	33133902	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	68	0	56	56	0	0	0
SYNC	81493	ucsc.edu	37	1	33147439	33147439	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	65	0	11	11	0	0	0
S100PBP	64766	ucsc.edu	37	1	33292419	33292419	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	89	0	2	2	0	0	0
TRIM62	55223	ucsc.edu	37	1	33613055	33613055	+	Missense_Mutation	SNP	C	C	A	rs140058139	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	77	0	0	0	0	0	0
ZSCAN20	7579	ucsc.edu	37	1	33954148	33954148	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	85	0	2	2	0	0	0
ZSCAN20	7579	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	33960785	33960785	+	Silent	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	36	108	0	0	0	0	0	0
CSMD2	114784	ucsc.edu	37	1	33987063	33987063	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	102	0	0	0	0	0	0
CSMD2	114784	ucsc.edu	37	1	34015858	34015858	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	129	1	0	0	0	0	0
CSMD2	114784	ucsc.edu	37	1	34090661	34090661	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	132	1	0	0	0	0	0
CSMD2	114784	ucsc.edu	37	1	34174754	34174754	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	129	0	0	0	0	0	0
CSMD2	114784	ucsc.edu	37	1	34181886	34181886	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	5	96	0	0	0	0	0	0
NCDN	23154	ucsc.edu	37	1	36024775	36024775	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	114	0	3	3	0	0	0
AGO1	26523	bcgsc.ca	37	1	36354198	36354198	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	6	94	0	0	0	0	0	0
AGO1	26523	ucsc.edu	37	1	36358819	36358819	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	68	7	137	1	4	4	0	0	0
AGO3	192669	ucsc.edu	37	1	36499925	36499925	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	65	0	1	1	0	0	0
MRPS15	64960	ucsc.edu	37	1	36926322	36926322	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	131	0	30	30	0	0	0
DNALI1	7802	ucsc.edu	37	1	38022636	38022636	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	134	0	36	36	0	0	0
GNL2	29889	ucsc.edu	37	1	38047913	38047913	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	41	0	6	6	0	0	0
MTF1	4520	ucsc.edu	37	1	38288365	38288365	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	72	7	118	0	4	4	0	0	0
FHL3	2275	ucsc.edu	37	1	38463363	38463363	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	6	110	0	0	0	0	0	0
UTP11L	51118	ucsc.edu;bcgsc.ca	37	1	38483378	38483378	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	75	9	136	1	10	10	0	0	0
RRAGC	64121	ucsc.edu	37	1	39321580	39321580	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	74	0	0	0	0	0	0
MACF1	23499	ucsc.edu	37	1	39845998	39845998	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	80	1	13	13	0	0	0
MFSD2A	84879	ucsc.edu	37	1	40431654	40431654	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	5	71	0	0	0	0	0	0
RLF	6018	ucsc.edu	37	1	40705575	40705575	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	85	0	5	5	0	0	0
ZNF684	127396	ucsc.edu	37	1	41013076	41013076	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	91	0	2	2	0	0	0
NFYC	4802	ucsc.edu	37	1	41236482	41236482	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	121	1	44	44	0	0	0
SCMH1	22955	ucsc.edu	37	1	41503035	41503035	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	135	3	0	0	0	0	0
EDN2	1907	ucsc.edu	37	1	41948200	41948200	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	102	0	17	17	0	0	0
HIVEP3	59269	ucsc.edu	37	1	41979366	41979366	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	74	0	0	0	0	0	0
HIVEP3	59269	ucsc.edu	37	1	42049611	42049611	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	5	126	0	0	0	0	0	0
FOXJ3	22887	ucsc.edu	37	1	42647664	42647664	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	46	0	5	5	0	0	0
FOXJ3	22887	ucsc.edu;bcgsc.ca	37	1	42660695	42660695	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	112	11	169	2	10	10	0	0	0
LEPRE1	64175	ucsc.edu	37	1	43221293	43221293	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	89	1	14	14	0	0	0
ERMAP	114625	ucsc.edu	37	1	43300733	43300733	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	152	1	2	2	0	0	0
SLC2A1	6513	ucsc.edu	37	1	43396818	43396818	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	94	0	5	5	0	0	0
WDR65	149465	bcgsc.ca	37	1	43665076	43665076	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	162	10	256	1	1	1	0	0	0
C1orf210	149466	ucsc.edu	37	1	43748485	43748485	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	119	0	22	22	0	0	0
C1orf210	149466	ucsc.edu	37	1	43748565	43748565	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	104	0	23	23	0	0	0
TIE1	7075	ucsc.edu	37	1	43775127	43775127	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	103	0	1	1	0	0	0
MPL	4352	ucsc.edu	37	1	43805230	43805230	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	124	0	0	0	0	0	0
ELOVL1	64834	ucsc.edu	37	1	43830291	43830291	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	140	1	53	53	0	0	0
SZT2	23334	ucsc.edu	37	1	43896206	43896206	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	105	0	4	4	0	0	0
SZT2	23334	bcgsc.ca	37	1	43911863	43911863	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	95	8	300	0	8	8	0	0	0
ATP6V0B	533	ucsc.edu	37	1	44442721	44442721	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	163	0	17	17	0	0	0
B4GALT2	8704	ucsc.edu	37	1	44450579	44450579	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	114	0	42	41	1	0	0
SLC6A9	6536	ucsc.edu	37	1	44476540	44476540	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	128	0	0	0	0	0	0
KIF2C	11004	ucsc.edu	37	1	45226309	45226309	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	4	70	0	0	0	0	0	0
PLK3	1263	ucsc.edu	37	1	45268961	45268961	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	99	0	3	3	0	0	0
PTCH2	8643	ucsc.edu	37	1	45293785	45293785	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	180	0	0	0	0	0	0
HECTD3	79654	ucsc.edu	37	1	45469391	45469391	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	135	0	23	23	0	0	0
HECTD3	79654	ucsc.edu	37	1	45473932	45473932	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	77	0	18	17	1	0	0
TESK2	10420	ucsc.edu	37	1	45821109	45821109	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	62	1	0	0	0	0	0
AKR1A1	10327	ucsc.edu	37	1	46035570	46035570	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	79	0	0	0	0	0	0
GPBP1L1	60313	bcgsc.ca	37	1	46093973	46093973	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	205	11	359	3	64	64	0	0	0
MAST2	23139	ucsc.edu	37	1	46495224	46495224	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	101	0	1	1	0	0	0
MAST2	23139	ucsc.edu	37	1	46501322	46501322	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	122	0	2	2	0	0	0
POMGNT1	55624	ucsc.edu	37	1	46659552	46659552	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	92	0	26	26	0	0	0
NSUN4	387338	ucsc.edu	37	1	46810790	46810790	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	98	0	7	7	0	0	0
DMBX1	127343	ucsc.edu	37	1	46976265	46976265	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	68	0	0	0	0	0	0
CYP4Z1	199974	ucsc.edu	37	1	47550411	47550411	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	76	7	220	0	0	0	0	0	0
TAL1	6886	ucsc.edu	37	1	47689759	47689759	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	172	0	0	0	0	0	0
SLC5A9	200010	ucsc.edu	37	1	48708225	48708225	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	5	94	0	2	2	0	0	0
AGBL4	84871	ucsc.edu	37	1	49056573	49056573	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	16	4	30	0	0	0	0	0	0
ELAVL4	1996	ucsc.edu	37	1	50666791	50666791	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	85	0	0	0	0	0	0
ZFYVE9	9372	ucsc.edu	37	1	52740239	52740239	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	107	1	2	2	0	0	0
ZYG11B	79699	ucsc.edu	37	1	53279559	53279559	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	76	0	14	14	0	0	0
TMEM48	55706	ucsc.edu	37	1	54301231	54301231	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	52	0	1	1	0	0	0
DIO1	1733	ucsc.edu;bcgsc.ca	37	1	54360088	54360088	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	83	8	184	1	0	0	0	0	0
MRPL37	51253	ucsc.edu	37	1	54666190	54666190	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	5	96	0	32	32	0	0	0
MRPL37	51253	ucsc.edu	37	1	54671080	54671080	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	5	117	1	0	0	0	0	0
ACOT11	26027	ucsc.edu	37	1	55050459	55050459	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	16	4	77	0	7	7	0	0	0
PARS2	25973	bcgsc.ca	37	1	55224438	55224438	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	116	8	333	0	4	4	0	0	0
C1orf177	163747	ucsc.edu	37	1	55280589	55280589	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	139	0	0	0	0	0	0
USP24	23358	ucsc.edu	37	1	55562820	55562820	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	79	0	4	4	0	0	0
PRKAA2	5563	ucsc.edu	37	1	57157160	57157160	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	6	56	1	1	1	0	0	0
C8A	731	ucsc.edu	37	1	57320624	57320624	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	48	0	0	0	0	0	0
C8B	732	ucsc.edu	37	1	57411675	57411675	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	94	0	0	0	0	0	0
DAB1	1600	ucsc.edu	37	1	57480736	57480736	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	99	1	0	0	0	0	0
FGGY	55277	ucsc.edu	37	1	60091671	60091671	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	36	0	0	0	0	0	0
HOOK1	51361	ucsc.edu	37	1	60336772	60336772	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	47	0	0	0	0	0	0
INADL	10207	ucsc.edu;bcgsc.ca	37	1	62253465	62253465	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	7	111	0	6	6	0	0	0
INADL	10207	ucsc.edu	37	1	62456019	62456019	+	Nonsense_Mutation	SNP	G	G	T	rs202201982	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	73	0	9	9	0	0	0
KANK4	163782	ucsc.edu	37	1	62739148	62739148	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	5	127	0	0	0	0	0	0
ALG6	29929	ucsc.edu	37	1	63877001	63877001	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	67	0	0	0	0	0	0
DNAJC6	9829	ucsc.edu;bcgsc.ca	37	1	65854068	65854068	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	79	8	124	0	11	11	0	0	0
DNAJC6	9829	ucsc.edu	37	1	65871650	65871650	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	120	0	4	4	0	0	0
WLS	79971	ucsc.edu	37	1	68619274	68619274	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	81	0	4	4	0	0	0
WLS	79971	ucsc.edu	37	1	68697928	68697928	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	6	113	0	4	4	0	0	0
RPE65	6121	ucsc.edu	37	1	68895583	68895583	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	87	0	0	0	0	0	0
RPE65	6121	ucsc.edu	37	1	68914343	68914343	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	59	0	1	1	0	0	0
CTH	1491	ucsc.edu	37	1	70877217	70877217	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	120	1	0	0	0	0	0
PTGER3	5733	bcgsc.ca	37	1	71418617	71418617	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	9	201	1	0	0	0	0	0
FPGT-TNNI3K	100526835	ucsc.edu	37	1	74905216	74905216	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	87	1	0	0	0	0	0
C1orf173	127254	ucsc.edu	37	1	75107048	75107048	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	69	8	101	0	0	0	0	0	0
TYW3	127253	ucsc.edu	37	1	75218041	75218041	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	75	0	0	0	0	0	0
PIGK	10026	ucsc.edu	37	1	77632460	77632460	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	63	0	7	7	0	0	0
USP33	23032	ucsc.edu	37	1	78207390	78207390	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	40	0	5	5	0	0	0
FAM73A	374986	ucsc.edu;bcgsc.ca	37	1	78309083	78309083	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	8	105	0	0	0	0	0	0
ELTD1	64123	ucsc.edu	37	1	79387393	79387393	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	74	0	1	1	0	0	0
BCL10	8915	ucsc.edu	37	1	85736307	85736307	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	72	0	0	0	0	0	0
COL24A1	255631	ucsc.edu	37	1	86340386	86340386	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	78	1	0	0	0	0	0
CLCA2	9635	ucsc.edu	37	1	86890024	86890024	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	6	93	0	0	0	0	0	0
PKN2	5586	ucsc.edu	37	1	89271255	89271255	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	54	0	7	7	0	0	0
GBP4	115361	ucsc.edu	37	1	89662793	89662793	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	84	0	0	0	0	0	0
CCDC18	343099	ucsc.edu	37	1	93676427	93676427	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	6	64	0	0	0	0	0	0
DR1	1810	ucsc.edu	37	1	93826087	93826087	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	48	0	11	11	0	0	0
ABCA4	24	ucsc.edu	37	1	94473808	94473808	+	Nonsense_Mutation	SNP	C	C	A	rs142253670	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	110	0	0	0	0	0	0
ABCA4	24	ucsc.edu	37	1	94508979	94508979	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	93	0	0	0	0	0	0
ABCD3	5825	ucsc.edu	37	1	94948749	94948749	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	66	0	32	32	0	0	0
CNN3	1266	bcgsc.ca	37	1	95363525	95363525	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	113	9	242	1	96	96	0	0	0
ALG14	199857	ucsc.edu	37	1	95492739	95492739	+	Silent	SNP	G	G	T	rs200299976	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	81	0	1	1	0	0	0
DPYD	1806	ucsc.edu	37	1	97839140	97839140	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	66	0	5	5	0	0	0
DPYD	1806	ucsc.edu	37	1	98015255	98015255	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	68	0	4	4	0	0	0
SNX7	51375	ucsc.edu	37	1	99164307	99164307	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	76	0	25	25	0	0	0
LOC100129620	0	bcgsc.ca	37	1	99473892	99473892	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	6	70	0	0	0	0	0	0
FRRS1	391059	ucsc.edu	37	1	100203806	100203806	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	6	101	0	3	3	0	0	0
SASS6	163786	ucsc.edu	37	1	100588811	100588811	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	54	0	0	0	0	0	0
OLFM3	118427	ucsc.edu	37	1	102270091	102270091	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	107	1	0	0	0	0	0
COL11A1	1301	ucsc.edu	37	1	103356019	103356019	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	5	41	0	0	0	0	0	0
COL11A1	1301	ucsc.edu	37	1	103427452	103427452	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	58	0	0	0	0	0	0
COL11A1	1301	ucsc.edu	37	1	103496685	103496685	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	5	60	0	0	0	0	0	0
VAV3	10451	ucsc.edu	37	1	108303443	108303443	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	60	0	1	1	0	0	0
FAM102B	284611	ucsc.edu	37	1	109103126	109103126	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	6	84	1	1	1	0	0	0
FAM102B	284611	ucsc.edu	37	1	109177734	109177734	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	64	6	99	0	0	0	0	0	0
KIAA1324	57535	ucsc.edu	37	1	109742594	109742594	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	101	0	0	0	0	0	0
CELSR2	1952	ucsc.edu	37	1	109794316	109794316	+	Missense_Mutation	SNP	C	C	A	rs138919468	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	97	0	4	4	0	0	0
CELSR2	1952	ucsc.edu	37	1	109810623	109810623	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	51	0	14	14	0	0	0
ATXN7L2	127002	ucsc.edu	37	1	110032626	110032626	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	6	234	0	3	3	0	0	0
GNAT2	2780	ucsc.edu	37	1	110146681	110146681	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	79	0	0	0	0	0	0
CSF1	1435	ucsc.edu;bcgsc.ca	37	1	110458278	110458278	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	107	0	4	4	0	0	0
SLC6A17	388662	ucsc.edu	37	1	110719268	110719268	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	151	1	2	2	0	0	0
RBM15	64783	ucsc.edu	37	1	110882226	110882226	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	63	0	7	7	0	0	0
CEPT1	10390	ucsc.edu	37	1	111690403	111690403	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	6	99	1	7	7	0	0	0
CEPT1	10390	ucsc.edu	37	1	111724863	111724863	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	81	0	7	7	0	0	0
CHIAP2	149620	ucsc.edu	37	1	111824329	111824329	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	98	0	0	0	0	0	0
WDR77	79084	ucsc.edu	37	1	111991279	111991279	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	92	1	7	7	0	0	0
DDX20	11218	bcgsc.ca	37	1	112308449	112308449	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	120	10	213	1	5	5	0	0	0
ST7L	54879	bcgsc.ca	37	1	113140644	113140644	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	166	10	226	2	1	1	0	0	0
SLC16A1	6566	ucsc.edu	37	1	113460538	113460538	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	95	0	1	1	0	0	0
MAGI3	260425	ucsc.edu	37	1	114193735	114193735	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	88	0	2	2	0	0	0
TRIM33	51592	ucsc.edu	37	1	115005859	115005859	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	41	0	0	0	0	0	0
NGF	4803	ucsc.edu	37	1	115828847	115828847	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	110	0	0	0	0	0	0
SLC22A15	55356	ucsc.edu	37	1	116609287	116609287	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	4	21	0	1	1	0	0	0
ATP1A1	476	ucsc.edu	37	1	116937907	116937907	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	110	1	1	1	0	0	0
PTGFRN	5738	ucsc.edu	37	1	117484619	117484619	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	100	0	8	8	0	0	0
WDR3	10885	bcgsc.ca	37	1	118494625	118494625	+	Silent	SNP	C	C	A	rs140893583	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	137	9	242	0	6	6	0	0	0
SPAG17	200162	ucsc.edu	37	1	118658056	118658056	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	74	0	0	0	0	0	0
NOTCH2	4853	ucsc.edu	37	1	120468135	120468135	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	6	157	2	23	23	0	0	0
ITGA10	8515	ucsc.edu	37	1	145533881	145533881	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	70	0	0	0	0	0	0
PIAS3	10401	ucsc.edu	37	1	145578989	145578989	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	168	0	0	0	0	0	0
PIAS3	10401	bcgsc.ca	37	1	145584028	145584028	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	136	8	496	2	4	4	0	0	0
PIAS3	10401	ucsc.edu	37	1	145584836	145584836	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	7	119	1	0	0	0	0	0
CHD1L	9557	ucsc.edu	37	1	146727486	146727486	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	62	0	4	4	0	0	0
CHD1L	9557	ucsc.edu	37	1	146763223	146763223	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	75	1	0	0	0	0	0
BCL9	607	ucsc.edu	37	1	147091601	147091601	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	191	0	6	6	0	0	0
SF3B4	10262	ucsc.edu	37	1	149898354	149898354	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	83	0	54	54	0	0	0
MTMR11	10903	ucsc.edu	37	1	149905354	149905354	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	141	0	17	17	0	0	0
OTUD7B	56957	ucsc.edu	37	1	149920918	149920918	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	87	0	7	7	0	0	0
TARS2	80222	ucsc.edu	37	1	150469323	150469323	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	95	0	6	6	0	0	0
ECM1	1893	ucsc.edu	37	1	150485019	150485019	+	Silent	SNP	C	C	A	rs199656407	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	6	108	0	1	1	0	0	0
SETDB1	9869	ucsc.edu	37	1	150933306	150933306	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	117	1	15	15	0	0	0
CERS2	29956	ucsc.edu	37	1	150939315	150939315	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	6	106	0	213	212	1	0	0
ANXA9	8416	ucsc.edu	37	1	150955610	150955610	+	Missense_Mutation	SNP	C	C	A	rs142659327	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	86	0	1	1	0	0	0
PI4KB	5298	ucsc.edu	37	1	151274360	151274360	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	135	0	14	14	0	0	0
SELENBP1	8991	ucsc.edu	37	1	151337049	151337049	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	180	0	17	17	0	0	0
POGZ	23126	ucsc.edu	37	1	151413515	151413515	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	89	0	8	8	0	0	0
CGN	57530	ucsc.edu	37	1	151491022	151491022	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	128	1	3	3	0	0	0
FLG	2312	ucsc.edu	37	1	152275590	152275590	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	123	1	0	0	0	0	0
FLG	2312	bcgsc.ca	37	1	152281161	152281161	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	162	11	609	1	1	1	0	0	0
FLG	2312	bcgsc.ca	37	1	152283200	152283200	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	263	14	791	3	5	5	0	0	0
FLG2	388698	bcgsc.ca	37	1	152324458	152324458	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	147	11	414	1	0	0	0	0	0
FLG2	388698	ucsc.edu	37	1	152331294	152331294	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	173	0	0	0	0	0	0
S100A1	6271	ucsc.edu	37	1	153603117	153603117	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	92	0	3	3	0	0	0
NPR1	4881	ucsc.edu	37	1	153659196	153659196	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	146	0	97	97	0	0	0
SLC27A3	11000	ucsc.edu	37	1	153751294	153751294	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	57	1	47	47	0	0	0
CRTC2	200186	ucsc.edu;bcgsc.ca	37	1	153920710	153920710	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	70	8	217	1	17	17	0	0	0
JTB	10899	ucsc.edu;bcgsc.ca	37	1	153949208	153949208	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	88	8	144	0	21	21	0	0	0
NUP210L	91181	ucsc.edu	37	1	154027262	154027262	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	40	0	0	0	0	0	0
NUP210L	91181	bcgsc.ca	37	1	154091187	154091187	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	181	11	252	1	0	0	0	0	0
AQP10	89872	ucsc.edu	37	1	154296203	154296203	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	168	1	0	0	0	0	0
ATP8B2	57198	bcgsc.ca	37	1	154300332	154300332	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	101	9	303	0	0	0	0	0	0
SHC1	6464	ucsc.edu	37	1	154938688	154938688	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	94	0	35	35	0	0	0
LOC100505666	0	ucsc.edu	37	1	155018312	155018312	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	15	4	41	0	1	1	0	0	0
ADAM15	8751	ucsc.edu	37	1	155026411	155026411	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	131	0	29	29	0	0	0
THBS3	7059	ucsc.edu	37	1	155165877	155165877	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	206	0	17	17	0	0	0
GBAP1	2630	ucsc.edu	37	1	155187165	155187165	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	4	131	0	0	0	0	0	0
CLK2	1196	bcgsc.ca	37	1	155240742	155240742	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	149	10	302	0	10	10	0	0	0
MSTO2P	100129405	ucsc.edu	37	1	155583231	155583231	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	41	0	0	0	0	0	0
MSTO2P	100129405	ucsc.edu	37	1	155718201	155718201	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	94	0	2	2	0	0	0
SYT11	23208	bcgsc.ca	37	1	155850385	155850385	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	99	8	248	0	6	6	0	0	0
ARHGEF2	9181	ucsc.edu	37	1	155928134	155928134	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	41	0	29	29	0	0	0
UBQLN4	56893	ucsc.edu	37	1	156011740	156011740	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	4	100	0	23	23	0	0	0
SEMA4A	64218	ucsc.edu	37	1	156126269	156126269	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	111	0	4	4	0	0	0
BCAN	63827	ucsc.edu	37	1	156622402	156622402	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	76	0	1	1	0	0	0
NES	10763	ucsc.edu	37	1	156639154	156639154	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	6	95	0	3	3	0	0	0
HDGF	3068	ucsc.edu	37	1	156713620	156713620	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	68	0	116	116	0	0	0
PRCC	5546	ucsc.edu	37	1	156756543	156756543	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	124	0	18	18	0	0	0
NTRK1	4914	ucsc.edu	37	1	156841464	156841464	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	123	0	0	0	0	0	0
ARHGEF11	9826	ucsc.edu	37	1	156948060	156948060	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	68	1	13	13	0	0	0
CD1C	911	ucsc.edu;bcgsc.ca	37	1	158262459	158262459	+	Silent	SNP	C	C	A	rs3138103	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	6	114	0	0	0	0	0	0
OR10K2	391107	ucsc.edu	37	1	158389967	158389967	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	6	76	0	0	0	0	0	0
OR6Y1	391112	ucsc.edu	37	1	158517165	158517165	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	108	0	0	0	0	0	0
OR6K2	81448	ucsc.edu	37	1	158670381	158670381	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	95	0	0	0	0	0	0
OR6K3	391114	ucsc.edu	37	1	158687258	158687258	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	66	7	149	0	0	0	0	0	0
OR6K3	391114	ucsc.edu	37	1	158687902	158687902	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	65	0	0	0	0	0	0
OR6N1	128372	ucsc.edu	37	1	158736353	158736353	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	101	0	0	0	0	0	0
DARC	2532	bcgsc.ca	37	1	159176166	159176166	+	Missense_Mutation	SNP	C	C	A	rs150917132	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	170	10	517	2	2	2	0	0	0
FCRL6	343413	ucsc.edu	37	1	159778982	159778982	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	134	1	0	0	0	0	0
CCDC19	25790	ucsc.edu	37	1	159842921	159842921	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	82	0	0	0	0	0	0
SLAMF9	89886	ucsc.edu	37	1	159923326	159923326	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	97	0	0	0	0	0	0
ATP1A2	477	ucsc.edu	37	1	160106364	160106364	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	125	0	0	0	0	0	0
ATP1A4	480	ucsc.edu	37	1	160124954	160124954	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	6	92	1	0	0	0	0	0
ATP1A4	480	ucsc.edu	37	1	160129300	160129300	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	154	0	0	0	0	0	0
CASQ1	844	ucsc.edu	37	1	160160769	160160769	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	86	0	0	0	0	0	0
CASQ1	844	ucsc.edu	37	1	160164815	160164815	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	82	0	0	0	0	0	0
PEX19	5824	ucsc.edu	37	1	160252836	160252836	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	6	117	2	23	23	0	0	0
COPA	1314	ucsc.edu	37	1	160268974	160268974	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	6	119	2	1	1	0	0	0
COPA	1314	ucsc.edu	37	1	160293259	160293259	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	71	0	49	49	0	0	0
NHLH1	4807	ucsc.edu	37	1	160340841	160340841	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	120	0	0	0	0	0	0
SLAMF7	57823	bcgsc.ca	37	1	160720174	160720174	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	127	10	296	0	0	0	0	0	0
ITLN1	55600	ucsc.edu	37	1	160849204	160849204	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	102	1	0	0	0	0	0
ITLN2	142683	ucsc.edu	37	1	160914960	160914960	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	80	0	0	0	0	0	0
USF1	7391	ucsc.edu	37	1	161010081	161010081	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	173	0	12	12	0	0	0
USF1	7391	ucsc.edu	37	1	161011553	161011553	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	152	0	23	23	0	0	0
NIT1	4817	ucsc.edu	37	1	161090358	161090358	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	102	0	9	9	0	0	0
B4GALT3	8703	ucsc.edu	37	1	161144941	161144941	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	140	0	12	12	0	0	0
FCGR2A	2212	ucsc.edu	37	1	161476246	161476246	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	155	0	13	12	0	0	1
FCGR3A	2214	ucsc.edu	37	1	161514627	161514627	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	101	0	4	4	0	0	0
FCGR3A	2214	ucsc.edu	37	1	161519522	161519522	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	98	0	9	9	0	0	0
SH2D1B	117157	ucsc.edu	37	1	162368862	162368862	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	71	0	0	0	0	0	0
UAP1	6675	bcgsc.ca	37	1	162557437	162557437	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	144	12	299	1	6	6	0	0	0
C1orf110	339512	bcgsc.ca	37	1	162824945	162824945	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	177	12	410	0	0	0	0	0	0
ALDH9A1	223	bcgsc.ca	37	1	165648814	165648814	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	94	8	115	0	0	0	0	0	0
TMCO1	54499	ucsc.edu	37	1	165721356	165721356	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	47	0	43	43	0	0	0
POGK	57645	ucsc.edu	37	1	166816775	166816775	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	88	0	21	21	0	0	0
POU2F1	5451	ucsc.edu	37	1	167368602	167368602	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	133	0	0	0	0	0	0
XCL1	6375	ucsc.edu;bcgsc.ca	37	1	168550340	168550340	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	55	7	105	0	0	0	0	0	0
SELP	6403	ucsc.edu	37	1	169582340	169582340	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	67	0	0	0	0	0	0
DNM3	26052	ucsc.edu	37	1	172100327	172100327	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	4	49	0	0	0	0	0	0
SUCO	51430	ucsc.edu	37	1	172547505	172547505	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	6	78	0	8	8	0	0	0
RABGAP1L	9910	bcgsc.ca	37	1	174200409	174200409	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	100	8	203	2	3	3	0	0	0
PAPPA2	60676	bcgsc.ca	37	1	176640166	176640166	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	136	9	306	0	0	0	0	0	0
PAPPA2	60676	ucsc.edu	37	1	176675502	176675502	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	67	0	0	0	0	0	0
FAM5B	57795	ucsc.edu	37	1	177249807	177249807	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	100	0	0	0	0	0	0
RASAL2	9462	bcgsc.ca	37	1	178359276	178359276	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	64	8	189	1	16	16	0	0	0
RASAL2	9462	ucsc.edu	37	1	178427397	178427397	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	96	0	9	9	0	0	0
ABL2	27	ucsc.edu	37	1	179081506	179081506	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	75	0	7	7	0	0	0
AXDND1	126859	ucsc.edu	37	1	179399713	179399713	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	77	8	89	1	0	0	0	0	0
FAM163A	148753	ucsc.edu	37	1	179782982	179782982	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	94	0	0	0	0	0	0
TOR1AIP1	26092	ucsc.edu	37	1	179883181	179883181	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	53	0	0	0	0	0	0
CEP350	9857	ucsc.edu	37	1	179972318	179972318	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	42	0	0	0	0	0	0
CEP350	9857	ucsc.edu	37	1	179983631	179983631	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	34	0	0	0	0	0	0
CEP350	9857	ucsc.edu	37	1	180063173	180063173	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	52	0	8	8	0	0	0
MR1	3140	ucsc.edu	37	1	181021455	181021455	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	87	0	2	2	0	0	0
ZNF648	127665	ucsc.edu	37	1	182026549	182026549	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	35	0	0	0	0	0	0
NPL	80896	ucsc.edu	37	1	182787814	182787814	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	5	77	0	0	0	0	0	0
NMNAT2	23057	ucsc.edu	37	1	183230433	183230433	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	72	0	0	0	0	0	0
EDEM3	80267	ucsc.edu	37	1	184675884	184675884	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	81	0	3	3	0	0	0
TRMT1L	81627	bcgsc.ca	37	1	185116372	185116372	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	89	8	118	1	0	0	0	0	0
HMCN1	83872	bcgsc.ca	37	1	185956618	185956618	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	224	12	347	1	0	0	0	0	0
HMCN1	83872	ucsc.edu	37	1	186014909	186014909	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	79	0	0	0	0	0	0
HMCN1	83872	ucsc.edu	37	1	186031662	186031662	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	45	0	0	0	0	0	0
HMCN1	83872	ucsc.edu	37	1	186047260	186047260	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	56	0	0	0	0	0	0
HMCN1	83872	ucsc.edu	37	1	186134267	186134267	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	98	0	0	0	0	0	0
C1orf27	54953	ucsc.edu	37	1	186368096	186368096	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	40	0	0	0	0	0	0
PTGS2	5743	bcgsc.ca	37	1	186646027	186646027	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	166	8	275	2	0	0	0	0	0
PLA2G4A	5321	ucsc.edu	37	1	186946724	186946724	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	42	0	0	0	0	0	0
FAM5C	339479	ucsc.edu;bcgsc.ca	37	1	190423962	190423962	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	7	72	0	0	0	0	0	0
RGS21	431704	ucsc.edu	37	1	192321292	192321292	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	5	56	0	0	0	0	0	0
CFH	3075	ucsc.edu	37	1	196695979	196695979	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	106	0	2	2	0	0	0
ASPM	259266	bcgsc.ca	37	1	197108937	197108937	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	215	12	245	0	1	1	0	0	0
ZBTB41	360023	ucsc.edu	37	1	197169318	197169318	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	67	0	1	1	0	0	0
KIF14	9928	bcgsc.ca	37	1	200534279	200534279	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	147	10	191	1	0	0	0	0	0
DDX59	83479	ucsc.edu;bcgsc.ca	37	1	200613540	200613540	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	104	10	159	1	9	9	0	0	0
C1orf106	55765	ucsc.edu	37	1	200877958	200877958	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	5	163	1	12	12	0	0	0
KIF21B	23046	ucsc.edu	37	1	200967665	200967665	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	119	1	0	0	0	0	0
TNNT2	7139	bcgsc.ca	37	1	201332477	201332477	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	119	8	329	1	0	0	0	0	0
RPS10P7	376693	ucsc.edu	37	1	201489288	201489288	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	60	0	5	5	0	0	0
NAV1	89796	ucsc.edu	37	1	201687691	201687691	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	130	0	0	0	0	0	0
IPO9	55705	ucsc.edu	37	1	201828122	201828122	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	6	66	0	0	0	0	0	0
LMOD1	25802	ucsc.edu	37	1	201869092	201869092	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	50	0	1	1	0	0	0
ELF3	1999	ucsc.edu	37	1	201981861	201981861	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	5	102	1	319	319	0	0	0
GPR37L1	9283	ucsc.edu	37	1	202096881	202096881	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	131	0	0	0	0	0	0
PTPN7	5778	ucsc.edu	37	1	202117775	202117775	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	61	0	0	0	0	0	0
LGR6	59352	ucsc.edu	37	1	202172958	202172958	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	116	0	0	0	0	0	0
PPP1R12B	4660	ucsc.edu	37	1	202457729	202457729	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	42	0	1	1	0	0	0
KDM5B	10765	ucsc.edu	37	1	202701052	202701052	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	74	0	16	15	0	1	0
KDM5B	10765	ucsc.edu	37	1	202729695	202729695	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	73	0	0	0	0	0	0
ADORA1	134	ucsc.edu	37	1	203134955	203134955	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	101	0	19	19	0	0	0
ADORA1	134	ucsc.edu	37	1	203135005	203135005	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	87	0	16	16	0	0	0
FMOD	2331	ucsc.edu	37	1	203317329	203317329	+	Missense_Mutation	SNP	G	G	T	rs139299015	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	91	0	2	2	0	0	0
PRELP	5549	ucsc.edu	37	1	203455927	203455927	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	98	0	1	1	0	0	0
ATP2B4	493	ucsc.edu	37	1	203669369	203669369	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	166	0	25	25	0	0	0
ATP2B4	493	ucsc.edu	37	1	203676159	203676159	+	Silent	SNP	G	G	T	rs2229564	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	41	0	11	11	0	0	0
ATP2B4	493	ucsc.edu	37	1	203678580	203678580	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	85	0	27	27	0	0	0
ZC3H11A	9877	ucsc.edu	37	1	203797455	203797455	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	56	0	25	25	0	0	0
PPP1R15B	84919	ucsc.edu	37	1	204380463	204380463	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	144	1	12	12	0	0	0
PIK3C2B	5287	ucsc.edu	37	1	204394798	204394798	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	88	0	3	3	0	0	0
MDM4	4194	ucsc.edu	37	1	204515999	204515999	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	39	0	0	0	0	0	0
CNTN2	6900	ucsc.edu	37	1	205041674	205041674	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	90	0	0	0	0	0	0
TMEM81	388730	ucsc.edu	37	1	205053409	205053409	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	115	0	3	3	0	0	0
C1orf186	440712	ucsc.edu	37	1	206239422	206239422	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	6	81	0	117	117	0	0	0
CTSE	1510	ucsc.edu	37	1	206325400	206325400	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	84	0	1	1	0	0	0
SRGAP2	23380	ucsc.edu	37	1	206594609	206594609	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	32	0	0	0	0	0	0
EIF2D	1939	ucsc.edu	37	1	206773178	206773178	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	121	0	0	0	0	0	0
EIF2D	1939	ucsc.edu	37	1	206785684	206785684	+	Silent	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	127	0	15	15	0	0	0
IL10	3586	ucsc.edu	37	1	206944389	206944389	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	158	0	0	0	0	0	0
FAIM3	9214	bcgsc.ca	37	1	207087328	207087328	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	104	8	258	2	0	0	0	0	0
PIGR	5284	ucsc.edu;bcgsc.ca	37	1	207108908	207108908	+	Missense_Mutation	SNP	C	C	A	rs200596025	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	6	109	0	59	59	0	0	0
CR2	1380	ucsc.edu	37	1	207646164	207646164	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	123	0	0	0	0	0	0
PLXNA2	5362	ucsc.edu	37	1	208227883	208227883	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	68	0	0	0	0	0	0
LAMB3	3914	ucsc.edu	37	1	209799288	209799288	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	49	0	5	5	0	0	0
LAMB3	3914	ucsc.edu	37	1	209803249	209803249	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	97	0	2	2	0	0	0
C1orf74	148304	ucsc.edu	37	1	209956836	209956836	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	119	0	2	2	0	0	0
SYT14	255928	ucsc.edu	37	1	210267801	210267801	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	94	0	1	1	0	0	0
KCNH1	3756	ucsc.edu	37	1	210948831	210948831	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	134	0	1	1	0	0	0
DTL	51514	ucsc.edu	37	1	212273636	212273636	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	136	0	1	1	0	0	0
PPP2R5A	5525	ucsc.edu	37	1	212530591	212530591	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	66	0	4	4	0	0	0
FAM71A	149647	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	212799448	212799448	+	Missense_Mutation	SNP	G	G	T	rs149566937	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	23	82	0	0	0	0	0	0
RPS6KC1	26750	ucsc.edu	37	1	213415943	213415943	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	5	59	0	2	2	0	0	0
PROX1	5629	ucsc.edu	37	1	214209130	214209130	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	67	1	0	0	0	0	0
PTPN14	5784	ucsc.edu	37	1	214537918	214537918	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	6	79	0	6	6	0	0	0
PTPN14	5784	ucsc.edu	37	1	214538010	214538010	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	109	0	0	0	0	0	0
CENPF	1063	ucsc.edu	37	1	214815699	214815699	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	68	0	1	1	0	0	0
USH2A	7399	ucsc.edu	37	1	215823962	215823962	+	Missense_Mutation	SNP	G	G	T	rs149222801	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	155	1	0	0	0	0	0
USH2A	7399	ucsc.edu	37	1	216370030	216370030	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	46	0	0	0	0	0	0
USH2A	7399	ucsc.edu	37	1	216498860	216498860	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	102	0	0	0	0	0	0
MARK1	4139	ucsc.edu	37	1	220752766	220752766	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	7	110	1	3	3	0	0	0
TAF1A	9015	ucsc.edu;bcgsc.ca	37	1	222742852	222742852	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	87	9	127	1	0	0	0	0	0
MIA3	375056	ucsc.edu	37	1	222801671	222801671	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	103	0	2	2	0	0	0
AIDA	64853	ucsc.edu	37	1	222849561	222849561	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	78	0	0	0	0	0	0
BROX	148362	ucsc.edu	37	1	222902128	222902128	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	43	0	18	17	1	0	0
DISP1	84976	ucsc.edu	37	1	223116239	223116239	+	Missense_Mutation	SNP	C	C	A	rs149713388	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	72	0	4	4	0	0	0
TP53BP2	7159	bcgsc.ca	37	1	223983835	223983835	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	81	6	193	0	19	19	0	0	0
NVL	4931	ucsc.edu	37	1	224517803	224517803	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	96	0	2	2	0	0	0
WDR26	80232	ucsc.edu	37	1	224585838	224585838	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	6	60	1	16	16	0	0	0
SDE2	163859	bcgsc.ca	37	1	226175942	226175942	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	169	10	308	1	8	8	0	0	0
H3F3AP4	440926	ucsc.edu	37	1	226252052	226252052	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	5	64	0	225	224	1	0	0
PARP1	142	ucsc.edu;bcgsc.ca	37	1	226549713	226549713	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	6	92	0	23	23	0	0	0
ZNF678	339500	ucsc.edu	37	1	227834295	227834295	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	98	1	1	1	0	0	0
OBSCN	84033	ucsc.edu	37	1	228468361	228468361	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	163	1	0	0	0	0	0
OBSCN	84033	ucsc.edu	37	1	228487062	228487062	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	5	95	0	0	0	0	0	0
TRIM11	81559	ucsc.edu	37	1	228589818	228589818	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	77	0	3	3	0	0	0
URB2	9816	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	229770859	229770859	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	20	104	1	0	0	0	0	0
URB2	9816	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	229770863	229770863	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	21	105	0	0	0	0	0	0
URB2	9816	ucsc.edu	37	1	229773682	229773682	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	110	1	1	1	0	0	0
PGBD5	79605	ucsc.edu	37	1	230492738	230492738	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	102	0	2	2	0	0	0
AGT	183	ucsc.edu	37	1	230840056	230840056	+	Silent	SNP	C	C	A	rs113943893	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	52	0	51	50	1	0	0
MAP10	54627	bcgsc.ca	37	1	232942030	232942030	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	388	17	430	1	1	1	0	0	0
PCNXL2	80003	ucsc.edu	37	1	233394125	233394125	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	93	0	16	16	0	0	0
KIAA1804	0	ucsc.edu	37	1	233515063	233515063	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	128	2	11	10	0	0	1
LYST	1130	bcgsc.ca	37	1	235940518	235940518	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	211	15	163	0	1	1	0	0	0
WDR64	128025	bcgsc.ca	37	1	241907728	241907728	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	122	10	98	0	0	0	0	0	0
SDCCAG8	10806	ucsc.edu	37	1	243589761	243589761	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	37	0	5	5	0	0	0
SCCPDH	51097	bcgsc.ca	37	1	246927605	246927605	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	300	15	207	0	81	81	0	0	0
NLRP3	114548	ucsc.edu	37	1	247608109	247608109	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	5	70	0	0	0	0	0	0
OR2M5	127059	bcgsc.ca	37	1	248308494	248308494	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	427	18	517	4	0	0	0	0	0
OR2M2	391194	bcgsc.ca	37	1	248343802	248343802	+	Missense_Mutation	SNP	G	G	T	rs200148029	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	350	15	398	1	0	0	0	0	0
OR2M3	127062	bcgsc.ca	37	1	248366884	248366884	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	293	15	335	0	0	0	0	0	0
OR2T3	343173	hgsc.bcm.edu;bcgsc.ca	37	1	248637423	248637423	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	392	20	647	0	0	0	0	0	0
ZNF692	55657	ucsc.edu	37	1	249152364	249152364	+	Missense_Mutation	SNP	G	G	T	rs144302716	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	44	0	5	5	0	0	0
DIP2C	22982	ucsc.edu	37	10	323436	323436	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	70	0	82	82	0	0	0
DIP2C	22982	ucsc.edu;bcgsc.ca	37	10	373095	373095	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	77	0	32	32	0	0	0
ADARB2	105	ucsc.edu	37	10	1313265	1313265	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	40	0	0	0	0	0	0
PFKP	5214	ucsc.edu	37	10	3161007	3161007	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	67	1	199	199	0	0	0
RBM17	84991	ucsc.edu;bcgsc.ca	37	10	6150653	6150653	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	73	8	67	0	1	1	0	0	0
SFMBT2	57713	bcgsc.ca	37	10	7214579	7214579	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	9	128	0	2	2	0	0	0
USP6NL	9712	ucsc.edu	37	10	11505175	11505175	+	Silent	SNP	G	G	T	rs3740204	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	94	1	14	14	0	0	0
CAMK1D	57118	bcgsc.ca	37	10	12803023	12803023	+	Missense_Mutation	SNP	C	C	A	rs143417427	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	100	8	98	0	5	5	0	0	0
MCM10	55388	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	13222572	13222572	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	192	88	182	0	0	0	0	0	0
NMT2	9397	bcgsc.ca	37	10	15154953	15154953	+	Missense_Mutation	SNP	C	C	A	rs201047504	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	111	7	150	0	0	0	0	0	0
C1QL3	389941	bcgsc.ca	37	10	16556595	16556595	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	147	11	132	0	3	3	0	0	0
CUBN	8029	bcgsc.ca	37	10	16882894	16882894	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	142	11	86	0	0	0	0	0	0
SLC39A12	221074	bcgsc.ca	37	10	18292185	18292185	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	206	11	178	0	0	0	0	0	0
NEBL	10529	ucsc.edu;bcgsc.ca	37	10	21101819	21101819	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	8	69	0	45	45	0	0	0
KIAA1217	56243	ucsc.edu	37	10	24831842	24831842	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	59	0	18	18	0	0	0
KIAA1217	56243	bcgsc.ca	37	10	24835032	24835032	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	127	10	148	0	37	37	0	0	0
GAD2	2572	bcgsc.ca	37	10	26589823	26589823	+	Missense_Mutation	SNP	C	C	A	rs140328709	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	166	10	194	0	0	0	0	0	0
ARHGAP12	94134	bcgsc.ca	37	10	32197762	32197762	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	247	13	171	0	5	5	0	0	0
C10orf68	79741	bcgsc.ca	37	10	33134884	33134884	+	Silent	SNP	C	C	A	rs201575874	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	272	13	198	0	0	0	0	0	0
CCNY	219771	ucsc.edu	37	10	35858071	35858071	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	6	60	1	54	54	0	0	0
BMS1	9790	bcgsc.ca	37	10	43279997	43279997	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	206	10	204	0	25	25	0	0	0
BMS1	9790	hgsc.bcm.edu	37	10	43315762	43315762	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	7	158	0	11	11	0	0	0
RET	5979	bcgsc.ca	37	10	43600638	43600638	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	8	74	0	0	0	0	0	0
ZNF487P	642819	ucsc.edu	37	10	43971213	43971213	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	44	0	8	8	0	0	0
ZFAND4	93550	bcgsc.ca	37	10	46143814	46143814	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	122	8	132	0	2	2	0	0	0
RBP3	5949	ucsc.edu	37	10	48389783	48389783	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	7	73	0	0	0	0	0	0
OGDHL	55753	ucsc.edu	37	10	50952122	50952122	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	62	0	243	243	0	0	0
FLJ31813	0	bcgsc.ca	37	10	51807896	51807896	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	92	8	140	0	0	0	0	0	0
A1CF	29974	bcgsc.ca	37	10	52580353	52580353	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	115	9	79	0	0	0	0	0	0
A1CF	29974	bcgsc.ca	37	10	52603775	52603775	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	250	13	225	0	0	0	0	0	0
BICC1	80114	bcgsc.ca	37	10	60577353	60577353	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	116	9	114	0	258	258	0	0	0
FAM13C	220965	bcgsc.ca	37	10	61043172	61043172	+	Silent	SNP	C	C	A	rs140590152	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	300	12	295	0	0	0	0	0	0
SLC16A9	220963	bcgsc.ca	37	10	61443961	61443961	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	159	11	227	1	12	12	0	0	0
RTKN2	219790	ucsc.edu	37	10	63999465	63999465	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	15	0	0	0	0	0	0
ZNF365	22891	bcgsc.ca	37	10	64159301	64159301	+	Missense_Mutation	SNP	C	C	A	rs147898988	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	176	9	234	0	0	0	0	0	0
JMJD1C	221037	bcgsc.ca	37	10	64974581	64974581	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	205	10	146	0	12	12	0	0	0
DDX50	79009	bcgsc.ca	37	10	70696798	70696798	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	225	12	184	0	24	24	0	0	0
HK1	3098	ucsc.edu	37	10	71154791	71154791	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	49	0	86	86	0	0	0
LRRC20	55222	ucsc.edu	37	10	72083776	72083776	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	68	0	0	0	0	0	0
EIF4EBP2	1979	bcgsc.ca	37	10	72179740	72179740	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	108	9	121	0	65	65	0	0	0
TBATA	219793	ucsc.edu	37	10	72536995	72536995	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	64	7	79	1	0	0	0	0	0
SGPL1	8879	ucsc.edu	37	10	72619177	72619177	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	6	63	0	33	32	1	0	0
SGPL1	8879	bcgsc.ca	37	10	72635219	72635219	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	117	9	106	0	32	32	0	0	0
PCBD1	5092	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	72643783	72643783	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	20	62	0	211	87	124	0	0
MICU1	10367	ucsc.edu	37	10	74127978	74127978	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	37	0	68	68	0	0	0
OIT3	170392	bcgsc.ca	37	10	74690314	74690314	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	365	14	346	1	0	0	0	0	0
MSS51	118490	ucsc.edu	37	10	75188060	75188060	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	50	0	0	0	0	0	0
ZSWIM8	23053	ucsc.edu;bcgsc.ca	37	10	75561109	75561109	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	8	40	0	40	40	0	0	0
ZSWIM8	23053	ucsc.edu	37	10	75561197	75561197	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	88	0	45	45	0	0	0
NDST2	8509	ucsc.edu	37	10	75562306	75562306	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	51	0	14	14	0	0	0
NDST2	8509	bcgsc.ca	37	10	75566885	75566885	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	370	16	476	0	6	6	0	0	0
POLR3A	11128	bcgsc.ca	37	10	79773544	79773544	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	118	10	116	0	0	0	0	0	0
PPIF	10105	ucsc.edu	37	10	81111276	81111276	+	Missense_Mutation	SNP	G	G	T	rs139864126	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	71	0	113	113	0	0	0
SFTPA1	653509	bcgsc.ca	37	10	81373729	81373729	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	276	13	520	0	0	0	0	0	0
TSPAN14	81619	ucsc.edu	37	10	82272025	82272025	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	46	0	0	0	0	0	0
LDB3	11155	bcgsc.ca	37	10	88451695	88451695	+	Silent	SNP	C	C	A	rs144509718	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	137	9	176	1	0	0	0	0	0
MMRN2	79812	ucsc.edu	37	10	88705377	88705377	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	5	31	0	2	2	0	0	0
LIPN	643418	ucsc.edu	37	10	90521973	90521973	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	30	0	0	0	0	0	0
KIF11	3832	ucsc.edu;bcgsc.ca	37	10	94373192	94373192	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	68	8	66	0	0	0	0	0	0
EXOC6	54536	bcgsc.ca	37	10	94715424	94715424	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	138	9	113	0	4	4	0	0	0
MYOF	26509	ucsc.edu	37	10	95137080	95137080	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	57	0	1	1	0	0	0
PIPSL	266971	ucsc.edu;bcgsc.ca	37	10	95718960	95718960	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	7	79	0	67	67	0	0	0
NOC3L	64318	bcgsc.ca	37	10	96104213	96104213	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	120	10	100	2	4	4	0	0	0
CYP2C19	1557	bcgsc.ca	37	10	96580383	96580383	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	182	10	183	0	0	0	0	0	0
PDLIM1	9124	bcgsc.ca	37	10	97031499	97031499	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	137	10	134	0	82	82	0	0	0
TCTN3	26123	bcgsc.ca	37	10	97440281	97440281	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	221	12	286	2	43	43	0	0	0
TLL2	7093	bcgsc.ca	37	10	98138790	98138790	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	153	10	231	0	0	0	0	0	0
TLL2	7093	bcgsc.ca	37	10	98192713	98192713	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	97	7	124	0	0	0	0	0	0
C10orf12	26148	bcgsc.ca	37	10	98742490	98742490	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	265	14	335	2	6	6	0	0	0
SLIT1	6585	ucsc.edu	37	10	98806451	98806451	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	56	0	0	0	0	0	0
SLIT1	6585	ucsc.edu	37	10	98825844	98825844	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	23	0	0	0	0	0	0
ARHGAP19	84986	bcgsc.ca	37	10	99016089	99016089	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	359	17	290	0	0	0	0	0	0
RRP12	23223	ucsc.edu	37	10	99130728	99130728	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	68	0	11	11	0	0	0
AVPI1	60370	ucsc.edu	37	10	99439425	99439425	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	5	46	0	7	7	0	0	0
SFRP5	6425	ucsc.edu	37	10	99529479	99529479	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	47	0	0	0	0	0	0
GOLGA7B	401647	ucsc.edu	37	10	99623815	99623815	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	94	0	2	2	0	0	0
R3HCC1L	27291	ucsc.edu	37	10	99995921	99995921	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	58	0	0	0	0	0	0
HPSE2	60495	bcgsc.ca	37	10	100374722	100374722	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	149	8	129	0	0	0	0	0	0
COX15	1355	bcgsc.ca	37	10	101478208	101478208	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	124	10	175	0	57	57	0	0	0
CHUK	1147	bcgsc.ca	37	10	101950726	101950726	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	158	11	139	0	0	0	0	0	0
CWF19L1	55280	bcgsc.ca	37	10	101996630	101996630	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	337	16	304	0	12	12	0	0	0
PKD2L1	9033	ucsc.edu	37	10	102089815	102089815	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	131	0	0	0	0	0	0
FAM178A	55719	ucsc.edu	37	10	102672913	102672913	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	89	0	10	10	0	0	0
MGEA5	10724	bcgsc.ca	37	10	103558669	103558669	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	132	8	142	1	113	113	0	0	0
MGEA5	10724	bcgsc.ca	37	10	103558831	103558831	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	219	14	246	1	89	89	0	0	0
NFKB2	4791	ucsc.edu	37	10	104158504	104158504	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	79	1	0	0	0	0	0
PSD	5662	ucsc.edu	37	10	104164797	104164797	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	72	0	1	1	0	0	0
CUEDC2	79004	ucsc.edu	37	10	104183934	104183934	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	91	0	0	0	0	0	0
NT5C2	22978	ucsc.edu	37	10	104854209	104854209	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	45	0	1	1	0	0	0
CALHM1	255022	ucsc.edu	37	10	105215318	105215318	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	46	0	0	0	0	0	0
SLK	9748	bcgsc.ca	37	10	105779663	105779663	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	177	10	122	0	42	42	0	0	0
WDR96	80217	bcgsc.ca	37	10	105926472	105926472	+	Missense_Mutation	SNP	C	C	A	rs199794656	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	180	11	153	0	0	0	0	0	0
SORCS3	22986	bcgsc.ca	37	10	106982898	106982898	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	135	8	166	0	0	0	0	0	0
ADD3	120	bcgsc.ca	37	10	111885675	111885675	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	134	11	98	0	27	27	0	0	0
PDCD4	27250	bcgsc.ca	37	10	112649344	112649344	+	Silent	SNP	C	C	A	rs141471132	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	511	20	385	0	26	26	0	0	0
HABP2	3026	ucsc.edu;bcgsc.ca	37	10	115337873	115337873	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	86	9	142	1	11	11	0	0	0
PLEKHS1	79949	ucsc.edu	37	10	115537173	115537173	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	5	25	0	0	0	0	0	0
AFAP1L2	84632	ucsc.edu	37	10	116100488	116100488	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	99	0	0	0	0	0	0
TRUB1	142940	ucsc.edu	37	10	116719539	116719539	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	57	0	11	11	0	0	0
HSPA12A	259217	ucsc.edu	37	10	118443398	118443398	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	55	0	1	1	0	0	0
HSPA12A	259217	bcgsc.ca	37	10	118451961	118451961	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	213	11	266	0	4	4	0	0	0
SFXN4	119559	bcgsc.ca	37	10	120905787	120905787	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	173	10	159	0	18	18	0	0	0
GRK5	2869	bcgsc.ca	37	10	121140365	121140365	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	192	11	204	0	3	3	0	0	0
SEC23IP	11196	ucsc.edu	37	10	121652375	121652375	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	8	67	1	3	3	0	0	0
FGFR2	2263	ucsc.edu	37	10	123263456	123263456	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	63	0	0	0	0	0	0
TACC2	10579	bcgsc.ca	37	10	123954554	123954554	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	152	11	240	0	0	0	0	0	0
DMBT1	1755	bcgsc.ca	37	10	124345758	124345758	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	229	9	496	1	0	0	0	0	0
CPXM2	119587	bcgsc.ca	37	10	125639745	125639745	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	258	14	235	2	0	0	0	0	0
CHST15	51363	ucsc.edu	37	10	125769813	125769813	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	58	0	8	8	0	0	0
CTBP2	1488	ucsc.edu	37	10	126715535	126715535	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	125	1	0	0	0	0	0
PTPRE	5791	ucsc.edu	37	10	129845667	129845667	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	55	0	6	6	0	0	0
TTC40	54777	ucsc.edu	37	10	134755203	134755203	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	63	0	2	2	0	0	0
TTC40	54777	ucsc.edu	37	10	134755214	134755214	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	67	2	0	0	0	0	0
KNDC1	85442	ucsc.edu	37	10	135027176	135027176	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	60	0	10	10	0	0	0
ADAM8	101	ucsc.edu	37	10	135080899	135080899	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	48	0	3	3	0	0	0
PAOX	196743	bcgsc.ca	37	10	135202523	135202523	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	365	16	458	0	12	12	0	0	0
NLRP6	171389	ucsc.edu	37	11	285266	285266	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	31	0	0	0	0	0	0
LRRC56	115399	ucsc.edu	37	11	551924	551924	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	69	0	4	4	0	0	0
CDHR5	53841	ucsc.edu	37	11	619738	619738	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	5	67	0	6	6	0	0	0
AP2A2	161	bcgsc.ca	37	11	988580	988580	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	175	11	286	1	45	45	0	0	0
MUC6	4588	ucsc.edu	37	11	1023958	1023958	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	37	0	0	0	0	0	0
MUC2	4583	ucsc.edu	37	11	1075704	1075704	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	16	4	52	1	0	0	0	0	0
MUC5B	727897	ucsc.edu	37	11	1248092	1248092	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	39	0	0	0	0	0	0
LSP1	4046	ucsc.edu	37	11	1901339	1901339	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	73	0	10	10	0	0	0
OSBPL5	114879	ucsc.edu	37	11	3114225	3114225	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	22	0	101	101	0	0	0
LOC650368	0	ucsc.edu	37	11	3423931	3423931	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	14	4	32	0	0	0	0	0	0
RRM1	6240	bcgsc.ca	37	11	4139644	4139644	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	202	12	189	0	28	28	0	0	0
MMP26	56547	ucsc.edu	37	11	5010931	5010931	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	48	0	0	0	0	0	0
OR51I2	390064	bcgsc.ca	37	11	5474965	5474965	+	Silent	SNP	C	C	A	rs144839036	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	190	10	212	0	0	0	0	0	0
TRIM6-TRIM34	445372	bcgsc.ca	37	11	5653609	5653609	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	139	10	186	0	5	5	0	0	0
OR52E6	390078	bcgsc.ca	37	11	5862566	5862566	+	Missense_Mutation	SNP	G	G	T	rs199724169	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	145	9	169	0	0	0	0	0	0
CNGA4	1262	bcgsc.ca	37	11	6261866	6261866	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	109	9	132	0	0	0	0	0	0
ZNF215	7762	ucsc.edu	37	11	6962824	6962824	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	55	0	0	0	0	0	0
NLRP14	338323	bcgsc.ca	37	11	7063773	7063773	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	125	9	100	1	0	0	0	0	0
SYT9	143425	ucsc.edu	37	11	7324552	7324552	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	59	0	0	0	0	0	0
ST5	6764	ucsc.edu	37	11	8720789	8720789	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	76	0	47	47	0	0	0
WEE1	7465	bcgsc.ca	37	11	9608329	9608329	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	92	8	66	0	24	24	0	0	0
SBF2	81846	bcgsc.ca	37	11	9834103	9834103	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	258	13	232	1	33	33	0	0	0
MRVI1	10335	ucsc.edu	37	11	10649533	10649533	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	65	0	0	0	0	0	0
CTR9	9646	ucsc.edu	37	11	10786264	10786264	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	6	35	0	8	8	0	0	0
CTR9	9646	ucsc.edu	37	11	10800307	10800307	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	54	1	15	15	0	0	0
MICAL2	9645	ucsc.edu;bcgsc.ca	37	11	12263911	12263911	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	6	89	1	0	0	0	0	0
MICALCL	84953	ucsc.edu	37	11	12315783	12315783	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	71	0	1	1	0	0	0
PARVA	55742	bcgsc.ca	37	11	12534881	12534881	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	214	14	306	0	56	56	0	0	0
COPB1	1315	bcgsc.ca	37	11	14480207	14480207	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	165	11	145	0	108	108	0	0	0
COPB1	1315	bcgsc.ca	37	11	14515239	14515239	+	Missense_Mutation	SNP	C	C	A	rs145180828	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	181	9	125	1	61	61	0	0	0
PDE3B	5140	bcgsc.ca	37	11	14854295	14854295	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	182	11	144	0	0	0	0	0	0
INSC	387755	ucsc.edu	37	11	15134095	15134095	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	52	0	0	0	0	0	0
INSC	387755	hgsc.bcm.edu	37	11	15212346	15212346	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	140	8	238	0	0	0	0	0	0
PLEKHA7	144100	bcgsc.ca	37	11	16824832	16824832	+	Missense_Mutation	SNP	C	C	A	rs182918648	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	102	7	129	0	1	1	0	0	0
PLEKHA7	144100	ucsc.edu	37	11	16838500	16838500	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	6	70	0	60	59	1	0	0
PLEKHA7	144100	bcgsc.ca	37	11	16872815	16872815	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	144	8	121	0	28	28	0	0	0
KCNC1	3746	ucsc.edu	37	11	17757771	17757771	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	69	0	0	0	0	0	0
TSG101	7251	bcgsc.ca	37	11	18505434	18505434	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	281	12	295	1	94	94	0	0	0
IGSF22	283284	bcgsc.ca	37	11	18741320	18741320	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	219	11	304	2	0	0	0	0	0
E2F8	79733	bcgsc.ca	37	11	19247287	19247287	+	Missense_Mutation	SNP	G	G	T	rs148337173	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	140	10	194	3	0	0	0	0	0
NAV2	89797	ucsc.edu	37	11	20075625	20075625	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	45	0	1	1	0	0	0
SLC6A5	9152	ucsc.edu	37	11	20623110	20623110	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	56	0	0	0	0	0	0
SLC6A5	9152	ucsc.edu	37	11	20623183	20623183	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	50	0	0	0	0	0	0
NELL1	4745	ucsc.edu	37	11	21392412	21392412	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	6	57	0	0	0	0	0	0
ANO5	203859	bcgsc.ca	37	11	22276976	22276976	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	316	15	260	3	4	4	0	0	0
ANO3	63982	bcgsc.ca	37	11	26463598	26463598	+	Silent	SNP	C	C	A	rs192799862	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	285	14	295	2	0	0	0	0	0
ANO3	63982	ucsc.edu	37	11	26563527	26563527	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	6	45	0	0	0	0	0	0
SLC5A12	159963	bcgsc.ca	37	11	26719960	26719960	+	Missense_Mutation	SNP	G	G	T	rs180785826	by1000genomes;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	92	8	75	0	0	0	0	0	0
DCDC5	100506627	ucsc.edu	37	11	30928273	30928273	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	41	0	0	0	0	0	0
QSER1	79832	bcgsc.ca	37	11	32954912	32954912	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	122	11	103	0	5	5	0	0	0
NAT10	55226	ucsc.edu	37	11	34165057	34165057	+	Nonsense_Mutation	SNP	C	C	A	rs143930117	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	33	0	29	29	0	0	0
LRRC4C	57689	bcgsc.ca	37	11	40137193	40137193	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	96	8	95	0	0	0	0	0	0
ALKBH3	221120	ucsc.edu;bcgsc.ca	37	11	43908203	43908203	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	94	9	73	0	0	0	0	0	0
EXT2	2132	ucsc.edu	37	11	44129767	44129767	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	6	54	0	41	41	0	0	0
EXT2	2132	bcgsc.ca	37	11	44193164	44193164	+	Silent	SNP	C	C	A	rs145903120	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	201	10	205	0	0	0	0	0	0
PRDM11	56981	ucsc.edu	37	11	45203411	45203411	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	5	50	0	6	6	0	0	0
CRY2	1408	bcgsc.ca	37	11	45877628	45877628	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	155	9	204	1	0	0	0	0	0
PEX16	9409	bcgsc.ca	37	11	45937816	45937816	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	327	13	413	1	33	33	0	0	0
ZNF408	79797	ucsc.edu	37	11	46724763	46724763	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	56	0	13	13	0	0	0
MADD	8567	bcgsc.ca	37	11	47310566	47310566	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	140	9	172	0	0	0	0	0	0
MYBPC3	4607	ucsc.edu	37	11	47362732	47362732	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	17	4	27	0	0	0	0	0	0
NUP160	23279	ucsc.edu	37	11	47809814	47809814	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	42	0	28	28	0	0	0
LOC440040	0	ucsc.edu	37	11	49598071	49598071	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	42	0	1	1	0	0	0
OR4C13	283092	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	49974076	49974076	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	307	35	299	0	0	0	0	0	0
OR7E5P	219445	ucsc.edu	37	11	55747475	55747475	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	58	0	0	0	0	0	0
OR5T1	390155	bcgsc.ca	37	11	56043847	56043847	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	245	15	243	0	0	0	0	0	0
OR8J1	219477	bcgsc.ca	37	11	56128025	56128025	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	173	10	185	0	0	0	0	0	0
OR5M9	390162	ucsc.edu	37	11	56230863	56230863	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	34	0	0	0	0	0	0
SSRP1	6749	bcgsc.ca	37	11	57101937	57101937	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	346	17	329	2	0	0	0	0	0
RTN4RL2	349667	bcgsc.ca	37	11	57235172	57235172	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	8	163	0	4	4	0	0	0
CLP1	10978	ucsc.edu	37	11	57427518	57427518	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	60	0	4	4	0	0	0
CTNND1	1500	ucsc.edu	37	11	57573406	57573406	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	43	0	126	126	0	0	0
CTNND1	1500	ucsc.edu	37	11	57582966	57582966	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	25	0	0	0	0	0	0
OR5B3	441608	bcgsc.ca	37	11	58170132	58170132	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	98	9	107	0	0	0	0	0	0
FAM111A	63901	bcgsc.ca	37	11	58920607	58920607	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	158	11	135	0	21	21	0	0	0
MS4A7	58475	ucsc.edu	37	11	60156874	60156874	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	42	0	0	0	0	0	0
MS4A8	83661	ucsc.edu;bcgsc.ca	37	11	60482832	60482832	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	64	8	67	0	0	0	0	0	0
SLC15A3	51296	ucsc.edu	37	11	60708600	60708600	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	4	53	0	0	0	0	0	0
VWCE	220001	ucsc.edu	37	11	61040784	61040784	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	90	1	0	0	0	0	0
DAK	26007	bcgsc.ca	37	11	61105436	61105436	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	114	8	140	0	35	35	0	0	0
DAK	26007	ucsc.edu	37	11	61106641	61106641	+	Silent	SNP	C	C	A	rs75924231	bycluster;byfrequency;by1000genomes;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	81	0	0	0	0	0	0
SYT7	9066	bcgsc.ca	37	11	61291373	61291373	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	211	13	384	2	1	1	0	0	0
SCGB1D4	404552	hgsc.bcm.edu	37	11	62065063	62065063	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	216	11	254	0	0	0	0	0	0
AHNAK	79026	bcgsc.ca	37	11	62296408	62296408	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	239	13	361	1	128	128	0	0	0
AHNAK	79026	bcgsc.ca	37	11	62299494	62299494	+	Missense_Mutation	SNP	C	C	A	rs143510486	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	258	16	336	0	152	152	0	0	0
INTS5	80789	bcgsc.ca	37	11	62415024	62415024	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	71	7	159	0	34	34	0	0	0
SLC22A8	9376	ucsc.edu	37	11	62760731	62760731	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	49	0	1	1	0	0	0
SLC22A9	114571	ucsc.edu	37	11	63177377	63177377	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	32	0	0	0	0	0	0
MIR3680-1	100500917	bcgsc.ca	37	11	63257630	63257630	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	189	11	300	0	0	0	0	0	0
MARK2	2011	ucsc.edu	37	11	63662660	63662660	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	77	0	16	16	0	0	0
MARK2	2011	bcgsc.ca	37	11	63668087	63668087	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	354	13	454	1	19	19	0	0	0
FLRT1	23769	ucsc.edu	37	11	63885415	63885415	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	75	0	0	0	0	0	0
TRPT1	83707	ucsc.edu	37	11	63991638	63991638	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	5	66	0	32	32	0	0	0
NUDT22	84304	ucsc.edu	37	11	63994204	63994204	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	107	0	33	33	0	0	0
FKBP2	2286	ucsc.edu	37	11	64010737	64010737	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	97	0	104	104	0	0	0
PLCB3	5331	ucsc.edu	37	11	64026620	64026620	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	14	4	29	0	13	13	0	0	0
CCDC88B	283234	ucsc.edu	37	11	64108973	64108973	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	98	0	0	0	0	0	0
ATG2A	23130	ucsc.edu	37	11	64678638	64678638	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	95	0	10	10	0	0	0
NAALADL1	10004	ucsc.edu	37	11	64822159	64822159	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	66	0	0	0	0	0	0
NAALADL1	10004	ucsc.edu	37	11	64822179	64822179	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	73	0	0	0	0	0	0
CAPN1	823	ucsc.edu	37	11	64953491	64953491	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	23	0	267	267	0	0	0
MALAT1	378938	bcgsc.ca	37	11	65266499	65266499	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	159	11	219	0	0	0	0	0	0
LTBP3	4054	ucsc.edu	37	11	65319036	65319036	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	83	0	4	4	0	0	0
PCNXL3	399909	ucsc.edu	37	11	65385438	65385438	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	36	0	14	14	0	0	0
PCNXL3	399909	ucsc.edu	37	11	65393464	65393464	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	55	0	25	25	0	0	0
SF3B2	10992	bcgsc.ca	37	11	65829378	65829378	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	6	46	0	141	141	0	0	0
TMEM151A	256472	ucsc.edu	37	11	66062026	66062026	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	34	1	1	1	0	0	0
SLC29A2	3177	ucsc.edu	37	11	66133408	66133408	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	101	0	6	6	0	0	0
NPAS4	266743	ucsc.edu	37	11	66192684	66192684	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	101	0	0	0	0	0	0
PC	5091	ucsc.edu	37	11	66618302	66618302	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	63	0	5	5	0	0	0
PC	5091	ucsc.edu	37	11	66619915	66619915	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	6	91	0	0	0	0	0	0
SYT12	91683	ucsc.edu	37	11	66802232	66802232	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	7	138	1	2	2	0	0	0
ADRBK1	156	ucsc.edu	37	11	67052870	67052870	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	55	0	44	44	0	0	0
ACY3	91703	ucsc.edu	37	11	67412800	67412800	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	79	0	38	38	0	0	0
LRP5	4041	ucsc.edu	37	11	68183946	68183946	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	74	0	76	76	0	0	0
CPT1A	1374	bcgsc.ca	37	11	68582878	68582878	+	Missense_Mutation	SNP	C	C	A	rs141658962	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	66	6	72	0	13	13	0	0	0
NUMA1	4926	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	71723991	71723991	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	22	130	0	152	81	70	0	1
NUMA1	4926	bcgsc.ca	37	11	71725291	71725291	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	265	12	328	1	80	80	0	0	0
INPPL1	3636	bcgsc.ca	37	11	71946480	71946480	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	157	10	250	1	49	49	0	0	0
ARAP1	116985	ucsc.edu	37	11	72415251	72415251	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	59	0	20	20	0	0	0
STARD10	10809	ucsc.edu	37	11	72469616	72469616	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	7	78	0	41	41	0	0	0
ARHGEF17	9828	ucsc.edu	37	11	73021799	73021799	+	Missense_Mutation	SNP	C	C	A	rs150609147	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	81	0	11	11	0	0	0
UCP3	7352	bcgsc.ca	37	11	73716835	73716835	+	Missense_Mutation	SNP	C	C	A	rs201405748	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	75	7	131	1	0	0	0	0	0
PGM2L1	283209	bcgsc.ca	37	11	74082862	74082862	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	189	12	176	0	0	0	0	0	0
PGM2L1	283209	ucsc.edu	37	11	74109188	74109188	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	83	0	5	5	0	0	0
KLHL35	283212	bcgsc.ca	37	11	75133785	75133785	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	152	13	204	0	1	1	0	0	0
MAP6	4135	bcgsc.ca	37	11	75298681	75298681	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	136	10	240	0	1	1	0	0	0
UVRAG	7405	bcgsc.ca	37	11	75562947	75562947	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	267	11	183	1	2	2	0	0	0
GDPD4	220032	ucsc.edu	37	11	76990430	76990430	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	6	63	0	0	0	0	0	0
KCTD14	65987	bcgsc.ca	37	11	77727916	77727916	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	191	9	216	2	12	12	0	0	0
GAB2	9846	bcgsc.ca	37	11	77933217	77933217	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	86	8	118	0	16	16	0	0	0
PCF11	51585	ucsc.edu	37	11	82878492	82878492	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	7	49	0	13	13	0	0	0
FZD4	8322	ucsc.edu	37	11	86662897	86662897	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	52	0	32	32	0	0	0
NOX4	50507	bcgsc.ca	37	11	89135649	89135649	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	230	10	187	1	5	5	0	0	0
FAT3	120114	ucsc.edu	37	11	92533739	92533739	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	46	0	3	3	0	0	0
HEPHL1	341208	ucsc.edu	37	11	93815734	93815734	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	37	0	0	0	0	0	0
FOLR4	390243	bcgsc.ca	37	11	94040719	94040719	+	Missense_Mutation	SNP	G	G	T	rs201445396	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	125	9	244	0	0	0	0	0	0
MRE11A	4361	bcgsc.ca	37	11	94224010	94224010	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	178	13	146	0	0	0	0	0	0
PIWIL4	143689	ucsc.edu;bcgsc.ca	37	11	94340804	94340804	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	81	10	81	0	0	0	0	0	0
PIWIL4	143689	bcgsc.ca	37	11	94353310	94353310	+	Silent	SNP	G	G	T	rs138259800	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	86	7	72	0	0	0	0	0	0
AMOTL1	154810	bcgsc.ca	37	11	94564704	94564704	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	110	8	125	0	0	0	0	0	0
FAM76B	143684	ucsc.edu	37	11	95520788	95520788	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	20	0	0	0	0	0	0
MMP27	64066	bcgsc.ca	37	11	102564678	102564678	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	166	12	163	0	0	0	0	0	0
MMP10	4319	ucsc.edu	37	11	102651255	102651255	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	79	0	0	0	0	0	0
MMP1	4312	bcgsc.ca	37	11	102662066	102662066	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	190	12	172	0	0	0	0	0	0
DYNC2H1	79659	ucsc.edu	37	11	102993715	102993715	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	24	0	0	0	0	0	0
ELMOD1	55531	ucsc.edu	37	11	107524947	107524947	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	11	0	0	0	0	0	0
ATM	472	bcgsc.ca	37	11	108188243	108188243	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	179	10	93	0	0	0	0	0	0
KDELC2	143888	bcgsc.ca	37	11	108357008	108357008	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	190	11	187	0	5	5	0	0	0
EXPH5	23086	bcgsc.ca	37	11	108383971	108383971	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	170	9	168	0	1	1	0	0	0
POU2AF1	5450	ucsc.edu	37	11	111228521	111228521	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	35	0	0	0	0	0	0
FDXACB1	91893	ucsc.edu	37	11	111747599	111747599	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	34	0	2	2	0	0	0
CRYAB	1410	ucsc.edu	37	11	111779668	111779668	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	83	8	81	1	13364	13353	6	1	4
CRYAB	1410	ucsc.edu	37	11	111782275	111782275	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	37	0	13266	13254	3	3	5
DIXDC1	85458	ucsc.edu	37	11	111863703	111863703	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	24	0	27	27	0	0	0
SDHD	6392	bcgsc.ca	37	11	111965564	111965564	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	155	10	189	0	199	199	0	0	0
NCAM1	4684	ucsc.edu;bcgsc.ca	37	11	113102493	113102493	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	95	9	145	0	0	0	0	0	0
ANKK1	255239	ucsc.edu	37	11	113266130	113266130	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	5	46	0	0	0	0	0	0
NXPE2	120406	ucsc.edu	37	11	114569009	114569009	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	36	0	0	0	0	0	0
ZNF259	8882	ucsc.edu	37	11	116658359	116658359	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	50	0	0	0	0	0	0
CEP164	22897	ucsc.edu	37	11	117266278	117266278	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	84	0	7	7	0	0	0
FXYD6	53826	ucsc.edu	37	11	117711863	117711863	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	75	0	0	0	0	0	0
TMPRSS13	84000	ucsc.edu	37	11	117789272	117789272	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	61	0	0	0	0	0	0
MLL	4297	bcgsc.ca	37	11	118376844	118376844	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	133	10	183	0	16	16	0	0	0
HYOU1	10525	bcgsc.ca	37	11	118924891	118924891	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	98	9	112	0	42	42	0	0	0
CBL	867	bcgsc.ca	37	11	119170448	119170448	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	442	16	551	1	4	4	0	0	0
USP2	9099	bcgsc.ca	37	11	119228467	119228467	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	547	21	770	1	0	0	0	0	0
TRIM29	23650	bcgsc.ca	37	11	120008506	120008506	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	189	11	301	0	47	47	0	0	0
POU2F3	25833	ucsc.edu	37	11	120180202	120180202	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	83	0	0	0	0	0	0
ARHGEF12	23365	bcgsc.ca	37	11	120328864	120328864	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	132	10	105	1	67	67	0	0	0
GRIK4	2900	bcgsc.ca	37	11	120732721	120732721	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	331	18	408	4	0	0	0	0	0
TBCEL	219899	ucsc.edu	37	11	120957666	120957666	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	42	0	12	12	0	0	0
SC5D	6309	bcgsc.ca	37	11	121177952	121177952	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	266	12	228	1	33	33	0	0	0
SORL1	6653	ucsc.edu	37	11	121466404	121466404	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	5	42	0	25	25	0	0	0
SORL1	6653	ucsc.edu	37	11	121498464	121498464	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	6	76	0	0	0	0	0	0
CRTAM	56253	ucsc.edu	37	11	122720814	122720814	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	80	0	0	0	0	0	0
GRAMD1B	57476	ucsc.edu	37	11	123476046	123476046	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	68	0	0	0	0	0	0
OR6M1	390261	ucsc.edu;bcgsc.ca	37	11	123677055	123677055	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	7	62	0	0	0	0	0	0
OR8B4	283162	ucsc.edu	37	11	124294160	124294160	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	44	0	0	0	0	0	0
CCDC15	80071	bcgsc.ca	37	11	124857765	124857765	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	375	18	509	2	0	0	0	0	0
PKNOX2	63876	ucsc.edu	37	11	125237802	125237802	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	6	87	0	0	0	0	0	0
ST3GAL4	6484	bcgsc.ca	37	11	126283466	126283466	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	81	7	106	0	268	268	0	0	0
ARHGAP32	9743	ucsc.edu	37	11	128840424	128840424	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	66	0	8	8	0	0	0
NFRKB	4798	bcgsc.ca	37	11	129748430	129748430	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	306	16	270	0	0	0	0	0	0
NFRKB	4798	bcgsc.ca	37	11	129756217	129756217	+	Silent	SNP	G	G	T	rs199731681	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	351	16	366	3	0	0	0	0	0
ADAMTS15	170689	ucsc.edu	37	11	130343553	130343553	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	79	0	10	10	0	0	0
IGSF9B	22997	ucsc.edu	37	11	133814122	133814122	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	37	0	0	0	0	0	0
VPS26B	112936	ucsc.edu;bcgsc.ca	37	11	134104947	134104947	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	7	86	0	0	0	0	0	0
GLB1L3	112937	ucsc.edu	37	11	134182757	134182757	+	Missense_Mutation	SNP	G	G	T	rs199686698	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	23	0	0	0	0	0	0
GLB1L2	89944	bcgsc.ca	37	11	134226263	134226263	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	160	9	217	1	3	3	0	0	0
IQSEC3	440073	ucsc.edu	37	12	274932	274932	+	Silent	SNP	G	G	T	rs115184339	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	81	0	1	1	0	0	0
SLC6A13	6540	ucsc.edu	37	12	336782	336782	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	98	1	81	81	0	0	0
WNK1	65125	bcgsc.ca	37	12	1006823	1006823	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	11	56	0	44	44	0	0	0
CACNA1C	775	ucsc.edu	37	12	2702497	2702497	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	40	0	0	0	0	0	0
NTF3	4908	bcgsc.ca	37	12	5603935	5603935	+	Silent	SNP	C	C	A	rs10849277	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	79	7	97	0	0	0	0	0	0
VWF	7450	ucsc.edu	37	12	6127909	6127909	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	104	0	8	8	0	0	0
PLEKHG6	55200	bcgsc.ca	37	12	6421447	6421447	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	78	7	123	1	2	2	0	0	0
PLEKHG6	55200	ucsc.edu	37	12	6422940	6422940	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	93	0	1	1	0	0	0
NOP2	4839	bcgsc.ca	37	12	6666438	6666438	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	300	15	466	0	15	15	0	0	0
NOP2	4839	ucsc.edu	37	12	6669472	6669472	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	89	1	7	7	0	0	0
NOP2	4839	ucsc.edu	37	12	6670182	6670182	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	42	0	10	10	0	0	0
CHD4	1108	bcgsc.ca	37	12	6692433	6692433	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	267	14	349	3	52	52	0	0	0
CHD4	1108	bcgsc.ca	37	12	6702706	6702706	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	143	10	228	0	27	27	0	0	0
CHD4	1108	bcgsc.ca	37	12	6711582	6711582	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	332	16	400	2	25	25	0	0	0
ACRBP	84519	ucsc.edu	37	12	6749372	6749372	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	79	0	2	2	0	0	0
CD4	920	bcgsc.ca	37	12	6923972	6923972	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	125	10	207	0	2	2	0	0	0
TPI1	7167	bcgsc.ca	37	12	6978334	6978334	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	248	15	364	0	0	0	0	0	0
LRRC23	10233	bcgsc.ca	37	12	7022149	7022149	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	171	9	318	3	17	17	0	0	0
PEX5	5830	bcgsc.ca	37	12	7343867	7343867	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	194	10	307	0	18	18	0	0	0
NECAP1	25977	bcgsc.ca	37	12	8248276	8248276	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	209	12	184	0	18	18	0	0	0
CLEC6A	93978	ucsc.edu	37	12	8628733	8628733	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	48	0	0	0	0	0	0
A2M	2	ucsc.edu	37	12	9232711	9232711	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	17	4	11	0	10	10	0	0	0
OLR1	4973	ucsc.edu	37	12	10321695	10321695	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	70	0	1	1	0	0	0
KLRAP1	10748	ucsc.edu	37	12	10746383	10746383	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	24	0	0	0	0	0	0
CSDA	8531	bcgsc.ca	37	12	10856654	10856654	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	187	10	194	0	0	0	0	0	0
ETV6	2120	bcgsc.ca	37	12	12022820	12022820	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	107	8	197	0	17	17	0	0	0
LRP6	4040	bcgsc.ca	37	12	12301949	12301949	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	309	16	401	2	8	8	0	0	0
HEBP1	50865	bcgsc.ca	37	12	13140110	13140110	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	188	12	203	2	41	41	0	0	0
HEBP1	50865	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	13140120	13140120	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	187	75	211	0	88	42	46	0	0
KIAA1467	57613	ucsc.edu	37	12	13208873	13208873	+	Silent	SNP	C	C	A	rs140438722	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	69	0	0	0	0	0	0
KIAA1467	57613	ucsc.edu	37	12	13208876	13208876	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	70	0	0	0	0	0	0
GRIN2B	2904	bcgsc.ca	37	12	13724748	13724748	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	238	13	207	0	0	0	0	0	0
GUCY2C	2984	ucsc.edu	37	12	14839106	14839106	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	6	26	0	0	0	0	0	0
WBP11	51729	bcgsc.ca	37	12	14946707	14946707	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	373	14	306	0	73	73	0	0	0
EPS8	2059	ucsc.edu	37	12	15811059	15811059	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	6	45	0	52	52	0	0	0
PIK3C2G	5288	ucsc.edu	37	12	18699269	18699269	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	14	0	0	0	0	0	0
PLEKHA5	54477	bcgsc.ca	37	12	19473539	19473539	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	392	17	278	0	13	13	0	0	0
PDE3A	5139	ucsc.edu;bcgsc.ca	37	12	20774293	20774293	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	8	54	0	1	1	0	0	0
SLCO1C1	53919	ucsc.edu;bcgsc.ca	37	12	20852639	20852639	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	87	8	63	0	0	0	0	0	0
ABCC9	10060	bcgsc.ca	37	12	22086800	22086800	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	142	9	117	0	0	0	0	0	0
ABCC9	10060	bcgsc.ca	37	12	22089557	22089557	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	93	9	59	0	0	0	0	0	0
SOX5	6660	bcgsc.ca	37	12	23696204	23696204	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	176	9	201	0	0	0	0	0	0
LINC00477	144360	ucsc.edu	37	12	24736379	24736379	+	RNA	SNP	G	G	T	rs147620896	by1000genomes;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	45	0	0	0	0	0	0
ITPR2	3709	bcgsc.ca	37	12	26639109	26639109	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	8	150	1	2	2	0	0	0
ITPR2	3709	ucsc.edu	37	12	26985680	26985680	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	73	7	100	0	3	3	0	0	0
ARNTL2	56938	bcgsc.ca	37	12	27521277	27521277	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	88	8	111	0	6	6	0	0	0
PPFIBP1	8496	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	27809595	27809595	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	176	79	113	0	51	31	20	0	0
PPFIBP1	8496	ucsc.edu;bcgsc.ca	37	12	27820107	27820107	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	75	8	87	0	0	0	0	0	0
CCDC91	55297	bcgsc.ca	37	12	28458629	28458629	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	459	17	363	0	10	10	0	0	0
OVCH1	341350	bcgsc.ca	37	12	29596371	29596371	+	Missense_Mutation	SNP	G	G	T	rs199557586	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	250	12	175	0	0	0	0	0	0
OVCH1	341350	ucsc.edu	37	12	29604409	29604409	+	Missense_Mutation	SNP	C	C	A	rs201598107	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	66	7	46	0	0	0	0	0	0
OVCH1	341350	ucsc.edu	37	12	29626001	29626001	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	37	0	0	0	0	0	0
TSPAN11	441631	ucsc.edu	37	12	31136038	31136038	+	Missense_Mutation	SNP	C	C	A	rs150702989	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	57	0	0	0	0	0	0
DENND5B	160518	bcgsc.ca	37	12	31540566	31540566	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	7	77	1	3	3	0	0	0
DENND5B	160518	bcgsc.ca	37	12	31577550	31577550	+	Silent	SNP	G	G	T	rs199919973	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	241	10	288	1	0	0	0	0	0
BICD1	636	ucsc.edu	37	12	32491913	32491913	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	96	0	0	0	0	0	0
PKP2	5318	ucsc.edu	37	12	33031110	33031110	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	72	0	1	1	0	0	0
KIF21A	55605	bcgsc.ca	37	12	39709745	39709745	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	307	14	224	1	0	0	0	0	0
ABCD2	225	bcgsc.ca	37	12	39994373	39994373	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	226	13	206	1	0	0	0	0	0
C12orf40	283461	bcgsc.ca	37	12	40110582	40110582	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	8	66	0	0	0	0	0	0
ADAMTS20	80070	bcgsc.ca	37	12	43860479	43860479	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	222	10	109	0	0	0	0	0	0
PLEKHA8P1	51054	bcgsc.ca	37	12	45567522	45567522	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	261	13	266	0	8	8	0	0	0
PLEKHA8P1	51054	bcgsc.ca	37	12	45567555	45567555	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	232	12	222	0	8	8	0	0	0
SCAF11	9169	bcgsc.ca	37	12	46320536	46320536	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	312	13	283	1	31	31	0	0	0
AMIGO2	347902	ucsc.edu	37	12	47471304	47471304	+	Missense_Mutation	SNP	C	C	A	rs11836128	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	53	0	1	1	0	0	0
HDAC7	51564	ucsc.edu	37	12	48180411	48180411	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	69	0	34	33	1	0	0
HDAC7	51564	ucsc.edu	37	12	48192377	48192377	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	47	0	39	39	0	0	0
COL2A1	1280	ucsc.edu	37	12	48377176	48377176	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	71	0	0	0	0	0	0
ASB8	140461	ucsc.edu	37	12	48543425	48543425	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	71	7	106	1	34	34	0	0	0
ARF3	377	ucsc.edu	37	12	49334971	49334971	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	91	0	0	0	0	0	0
MLL2	8085	ucsc.edu	37	12	49443476	49443476	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	60	0	0	0	0	0	0
C1QL4	338761	ucsc.edu	37	12	49729837	49729837	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	40	0	13	13	0	0	0
KCNH3	23416	bcgsc.ca	37	12	49937738	49937738	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	119	9	195	1	12	12	0	0	0
FAIM2	23017	bcgsc.ca	37	12	50290822	50290822	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	88	8	147	0	0	0	0	0	0
GPD1	2819	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	12	50503242	50503242	+	Nonsense_Mutation	SNP	C	C	G	rs116736822	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	87	26	135	0	1	0	1	0	0
TFCP2	7024	bcgsc.ca	37	12	51500333	51500333	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	127	9	114	1	17	17	0	0	0
KRT86	3892	ucsc.edu;bcgsc.ca	37	12	52702026	52702026	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	77	9	90	0	0	0	0	0	0
KRT6C	286887	bcgsc.ca	37	12	52864947	52864947	+	Missense_Mutation	SNP	C	C	A	rs199836454	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	219	10	401	1	0	0	0	0	0
KRT76	51350	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	12	53170736	53170736	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	24	72	0	0	0	0	0	0
KRT78	196374	ucsc.edu	37	12	53233709	53233709	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	53	0	0	0	0	0	0
ESPL1	9700	bcgsc.ca	37	12	53664548	53664548	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	113	8	103	0	0	0	0	0	0
AAAS	8086	ucsc.edu	37	12	53709547	53709547	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	57	0	32	31	0	0	1
HOXC11	3227	ucsc.edu	37	12	54367013	54367013	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	5	47	0	0	0	0	0	0
MIR196A2	406973	ucsc.edu	37	12	54385602	54385602	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	32	0	0	0	0	0	0
HOXC4	3221	ucsc.edu	37	12	54448652	54448652	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	84	0	16	16	0	0	0
HOXC4	3221	ucsc.edu	37	12	54448785	54448785	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	5	57	0	60	60	0	0	0
SMUG1	23583	ucsc.edu	37	12	54577441	54577441	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	98	0	2	2	0	0	0
MUCL1	118430	bcgsc.ca	37	12	55252004	55252004	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	235	11	210	0	0	0	0	0	0
OR10P1	121130	ucsc.edu	37	12	56031596	56031596	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	66	0	0	0	0	0	0
ERBB3	2065	bcgsc.ca	37	12	56481633	56481633	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	120	10	189	1	37	37	0	0	0
ERBB3	2065	bcgsc.ca	37	12	56482372	56482372	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	263	13	332	2	69	69	0	0	0
GLS2	27165	ucsc.edu	37	12	56872047	56872047	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	86	0	1	1	0	0	0
BAZ2A	11176	ucsc.edu	37	12	57009063	57009063	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	91	0	23	23	0	0	0
ATP5B	506	ucsc.edu	37	12	57037363	57037363	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	53	0	4	4	0	0	0
MYO1A	4640	bcgsc.ca	37	12	57422572	57422572	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	116	9	166	3	1	1	0	0	0
NAB2	4665	ucsc.edu;bcgsc.ca	37	12	57485267	57485267	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	74	8	160	1	13	13	0	0	0
LRP1	4035	ucsc.edu	37	12	57603624	57603624	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	62	0	38	38	0	0	0
LRP1	4035	ucsc.edu	37	12	57606328	57606328	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	80	0	44	44	0	0	0
NXPH4	11247	ucsc.edu	37	12	57619327	57619327	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	48	0	0	0	0	0	0
ARHGAP9	64333	ucsc.edu	37	12	57871439	57871439	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	64	0	1	1	0	0	0
MARS	4141	ucsc.edu	37	12	57905572	57905572	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	65	0	19	19	0	0	0
MBD6	114785	ucsc.edu	37	12	57920110	57920110	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	81	0	85	85	0	0	0
LRIG3	121227	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	59271290	59271290	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	39	98	0	11	4	7	0	0
SLC16A7	9194	bcgsc.ca	37	12	60169071	60169071	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	260	13	281	0	12	12	0	0	0
IL26	55801	bcgsc.ca	37	12	68619419	68619419	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	240	14	217	1	0	0	0	0	0
MDM2	4193	bcgsc.ca	37	12	69203025	69203025	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	658	26	642	4	20	20	0	0	0
FRS2	10818	bcgsc.ca	37	12	69962851	69962851	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	105	10	55	0	8	8	0	0	0
PTPRR	5801	bcgsc.ca	37	12	71078558	71078558	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	196	11	115	1	0	0	0	0	0
NAV3	89795	bcgsc.ca	37	12	78400549	78400549	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	183	11	200	0	0	0	0	0	0
NAV3	89795	ucsc.edu;bcgsc.ca	37	12	78531070	78531070	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	108	12	133	0	0	0	0	0	0
NAV3	89795	ucsc.edu	37	12	78598806	78598806	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	70	0	0	0	0	0	0
OTOGL	283310	bcgsc.ca	37	12	80749649	80749649	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	353	16	317	1	1	1	0	0	0
ACSS3	79611	bcgsc.ca	37	12	81568669	81568669	+	Missense_Mutation	SNP	C	C	A	rs185881304	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	110	8	90	0	67	67	0	0	0
TMTC2	160335	ucsc.edu	37	12	83081395	83081395	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	49	0	6	6	0	0	0
PLXNC1	10154	hgsc.bcm.edu;bcgsc.ca	37	12	94613897	94613897	+	Silent	SNP	C	C	A	rs146510015	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	197	15	338	0	4	4	0	0	0
AMDHD1	144193	ucsc.edu	37	12	96361537	96361537	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	7	25	0	0	0	0	0	0
CDK17	5128	bcgsc.ca	37	12	96676292	96676292	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	92	9	77	0	1	1	0	0	0
NR1H4	9971	bcgsc.ca	37	12	100904888	100904888	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	144	10	167	0	33	33	0	0	0
UTP20	27340	ucsc.edu	37	12	101759360	101759360	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	46	0	5	5	0	0	0
UTP20	27340	bcgsc.ca	37	12	101763545	101763545	+	Missense_Mutation	SNP	C	C	A	rs142621773	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	229	11	260	0	8	8	0	0	0
NUP37	79023	ucsc.edu;bcgsc.ca	37	12	102468173	102468173	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	70	9	69	0	26	26	0	0	0
PARPBP	55010	ucsc.edu	37	12	102542015	102542015	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	30	0	0	0	0	0	0
CHST11	50515	ucsc.edu	37	12	105150790	105150790	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	62	0	4	4	0	0	0
CHST11	50515	ucsc.edu;bcgsc.ca	37	12	105150944	105150944	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	66	7	105	0	7	7	0	0	0
C12orf45	121053	ucsc.edu	37	12	105381974	105381974	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	46	0	2	2	0	0	0
POLR3B	55703	bcgsc.ca	37	12	106826231	106826231	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	150	11	137	0	1	1	0	0	0
PRDM4	11108	ucsc.edu	37	12	108150630	108150630	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	43	0	27	27	0	0	0
WSCD2	9671	ucsc.edu	37	12	108626534	108626534	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	37	0	0	0	0	0	0
MVK	4598	ucsc.edu	37	12	110012659	110012659	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	25	0	21	21	0	0	0
MVK	4598	ucsc.edu	37	12	110029124	110029124	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	78	0	44	44	0	0	0
FAM222A	84915	ucsc.edu	37	12	110205824	110205824	+	Silent	SNP	G	G	T	rs201862690	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	63	0	0	0	0	0	0
TRPV4	59341	bcgsc.ca	37	12	110232246	110232246	+	Missense_Mutation	SNP	C	C	A	rs202244562	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	126	8	156	0	7	7	0	0	0
GLTP	51228	bcgsc.ca	37	12	110290426	110290426	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	263	11	336	1	25	25	0	0	0
TCHP	84260	ucsc.edu	37	12	110348987	110348987	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	36	0	12	12	0	0	0
GIT2	9815	ucsc.edu	37	12	110397733	110397733	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	70	8	84	0	16	16	0	0	0
ANKRD13A	88455	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	110457067	110457067	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	92	39	114	0	38	18	20	0	0
ATP2A2	488	ucsc.edu	37	12	110780224	110780224	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	50	0	120	120	0	0	0
NAA25	80018	ucsc.edu	37	12	112498992	112498992	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	26	0	0	0	0	0	0
HECTD4	283450	ucsc.edu	37	12	112701909	112701909	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	29	1	7	7	0	0	0
TBX5	6910	ucsc.edu	37	12	114804007	114804007	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	6	76	0	0	0	0	0	0
TBX5	6910	bcgsc.ca	37	12	114839657	114839657	+	Silent	SNP	C	C	A	rs146898572	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	135	8	125	0	0	0	0	0	0
MED13L	23389	ucsc.edu	37	12	116446536	116446536	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	66	1	33	33	0	0	0
FBXW8	26259	bcgsc.ca	37	12	117426477	117426477	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	289	16	302	1	0	0	0	0	0
KSR2	283455	ucsc.edu	37	12	117993089	117993089	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	50	0	0	0	0	0	0
PRKAB1	5564	ucsc.edu	37	12	120106076	120106076	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	36	0	48	48	0	0	0
PRKAB1	5564	ucsc.edu	37	12	120114451	120114451	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	114	0	90	90	0	0	0
GCN1L1	10985	bcgsc.ca	37	12	120576143	120576143	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	144	10	170	0	39	39	0	0	0
GCN1L1	10985	ucsc.edu	37	12	120586143	120586143	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	60	0	0	0	0	0	0
RPLP0	6175	bcgsc.ca	37	12	120636991	120636991	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	83	7	101	0	1706	1705	1	0	0
SRSF9	8683	ucsc.edu	37	12	120903581	120903581	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	66	0	0	0	0	0	0
UNC119B	84747	bcgsc.ca	37	12	121154493	121154493	+	Missense_Mutation	SNP	C	C	A	rs140316676	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	264	13	396	0	92	92	0	0	0
CAMKK2	10645	ucsc.edu	37	12	121698137	121698137	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	66	0	20	20	0	0	0
ANAPC5	51433	ucsc.edu	37	12	121764980	121764980	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	72	0	62	62	0	0	0
KDM2B	84678	ucsc.edu	37	12	121958789	121958789	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	55	0	0	0	0	0	0
MLXIP	22877	ucsc.edu	37	12	122616872	122616872	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	30	0	32	32	0	0	0
HCAR1	27198	bcgsc.ca	37	12	123213867	123213867	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	125	10	159	0	0	0	0	0	0
HCAR1	27198	ucsc.edu	37	12	123214626	123214626	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	46	0	0	0	0	0	0
DENR	8562	bcgsc.ca	37	12	123238276	123238276	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	77	7	69	0	20	20	0	0	0
ABCB9	23457	ucsc.edu	37	12	123425415	123425415	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	41	0	2	2	0	0	0
MPHOSPH9	10198	bcgsc.ca	37	12	123651307	123651307	+	Missense_Mutation	SNP	C	C	A	rs114386666	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	159	8	210	0	6	6	0	0	0
C12orf65	91574	ucsc.edu	37	12	123738298	123738298	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	74	7	120	0	27	27	0	0	0
ATP6V0A2	23545	bcgsc.ca	37	12	124233163	124233163	+	Missense_Mutation	SNP	C	C	A	rs149700024	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	192	11	179	1	3	3	0	0	0
NCOR2	9612	ucsc.edu	37	12	124839415	124839415	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	66	0	38	38	0	0	0
NCOR2	9612	ucsc.edu	37	12	124846841	124846841	+	Missense_Mutation	SNP	C	C	A	rs201362929	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	32	0	0	0	0	0	0
DHX37	57647	ucsc.edu	37	12	125451742	125451742	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	53	0	3	3	0	0	0
TMEM132D	121256	bcgsc.ca	37	12	129559309	129559309	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	150	11	179	2	0	0	0	0	0
TMEM132D	121256	ucsc.edu	37	12	129569185	129569185	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	72	0	0	0	0	0	0
TMEM132D	121256	bcgsc.ca	37	12	130185031	130185031	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	76	6	97	0	1	1	0	0	0
STX2	2054	bcgsc.ca	37	12	131293178	131293178	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	564	21	460	1	0	0	0	0	0
GPR133	283383	ucsc.edu;bcgsc.ca	37	12	131471705	131471705	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	8	118	0	1	1	0	0	0
MMP17	4326	ucsc.edu	37	12	132335538	132335538	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	51	0	0	0	0	0	0
EP400	57634	bcgsc.ca	37	12	132491404	132491404	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	108	9	86	1	10	10	0	0	0
GALNT9	50614	ucsc.edu	37	12	132688057	132688057	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	50	0	1	1	0	0	0
ZNF268	10795	ucsc.edu;bcgsc.ca	37	12	133768197	133768197	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	7	38	0	0	0	0	0	0
ZNF268	10795	ucsc.edu	37	12	133779349	133779349	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	32	0	5	5	0	0	0
LATS2	26524	ucsc.edu	37	13	21553838	21553838	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	5	30	1	0	0	0	0	0
SKA3	221150	bcgsc.ca	37	13	21742376	21742376	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	145	8	176	0	0	0	0	0	0
MIPEP	4285	ucsc.edu	37	13	24460472	24460472	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	76	0	2	2	0	0	0
CENPJ	55835	bcgsc.ca	37	13	25466881	25466881	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	294	14	260	0	1	1	0	0	0
MTMR6	9107	ucsc.edu	37	13	25831396	25831396	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	54	0	14	14	0	0	0
ATP8A2	51761	bcgsc.ca	37	13	26114501	26114501	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	107	10	75	0	0	0	0	0	0
KATNAL1	84056	bcgsc.ca	37	13	30829679	30829679	+	Silent	SNP	G	G	T	rs149984675	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	431	19	443	2	4	4	0	0	0
TEX26	122046	bcgsc.ca	37	13	31531133	31531133	+	Missense_Mutation	SNP	C	C	A	rs143453942	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	156	10	138	0	0	0	0	0	0
FRY	10129	ucsc.edu;bcgsc.ca	37	13	32721474	32721474	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	55	8	46	0	3	3	0	0	0
N4BP2L2	10443	ucsc.edu	37	13	33017746	33017746	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	45	0	8	8	0	0	0
N4BP2L2	10443	broad.mit.edu	37	13	33095588	33095588	+	Splice_Site	SNP	T	T	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	122	4	101	0	5	5	0	0	0
STARD13	90627	bcgsc.ca	37	13	33679830	33679830	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	194	11	150	0	20	20	0	0	0
CCDC169-SOHLH2	100526761	bcgsc.ca	37	13	36764179	36764179	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	177	11	109	1	1	1	0	0	0
FREM2	341640	broad.mit.edu	37	13	39422803	39422803	+	Silent	SNP	C	C	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	73	3	65	0	0	0	0	0	0
FREM2	341640	bcgsc.ca	37	13	39452383	39452383	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	109	8	115	0	7	7	0	0	0
PROSER1	80209	ucsc.edu;bcgsc.ca	37	13	39587757	39587757	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	71	8	88	0	10	10	0	0	0
KBTBD7	84078	bcgsc.ca	37	13	41766757	41766757	+	Missense_Mutation	SNP	C	C	A	rs189507322	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	151	9	140	0	6	6	0	0	0
MTRF1	9617	bcgsc.ca	37	13	41797443	41797443	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	306	15	272	0	7	7	0	0	0
EPSTI1	94240	ucsc.edu	37	13	43566256	43566256	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	81	0	1	1	0	0	0
ENOX1	55068	ucsc.edu	37	13	43798265	43798265	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	6	41	0	0	0	0	0	0
SLC25A30	253512	bcgsc.ca	37	13	45978518	45978518	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	117	10	68	0	30	30	0	0	0
COG3	83548	bcgsc.ca	37	13	46054268	46054268	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	120	10	97	0	0	0	0	0	0
ZC3H13	23091	hgsc.bcm.edu	37	13	46549571	46549571	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	147	9	170	1	20	20	0	0	0
KIAA0226L	80183	ucsc.edu	37	13	46942376	46942376	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	6	40	0	0	0	0	0	0
LRCH1	23143	ucsc.edu;bcgsc.ca	37	13	47308129	47308129	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	7	34	0	0	0	0	0	0
FNDC3A	22862	ucsc.edu	37	13	49761264	49761264	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	71	7	69	1	0	0	0	0	0
CAB39L	81617	bcgsc.ca	37	13	49906129	49906129	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	264	14	202	1	10	10	0	0	0
ST13P4	145165	ucsc.edu	37	13	50746383	50746383	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	6	65	0	100	99	0	0	1
ATP7B	540	ucsc.edu	37	13	52524464	52524464	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	91	0	5	5	0	0	0
MRPS31P5	100887750	ucsc.edu	37	13	52749858	52749858	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	43	0	5	5	0	0	0
CKAP2	26586	bcgsc.ca	37	13	53035978	53035978	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	102	7	91	0	2	2	0	0	0
LMO7	4008	bcgsc.ca	37	13	76415807	76415807	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	189	11	212	2	88	88	0	0	0
FBXL3	26224	bcgsc.ca	37	13	77595878	77595878	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	200	12	209	0	11	11	0	0	0
SLITRK1	114798	ucsc.edu	37	13	84453777	84453777	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	54	0	9	9	0	0	0
ABCC4	10257	bcgsc.ca	37	13	95859036	95859036	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	273	13	265	0	0	0	0	0	0
SLC15A1	6564	bcgsc.ca	37	13	99356548	99356548	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	143	10	140	0	0	0	0	0	0
DOCK9	23348	bcgsc.ca	37	13	99461688	99461688	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	132	10	153	0	9	9	0	0	0
NALCN	259232	bcgsc.ca	37	13	101717784	101717784	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	145	10	159	1	0	0	0	0	0
TPP2	7174	ucsc.edu;bcgsc.ca	37	13	103326639	103326639	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	7	62	0	0	0	0	0	0
TEX30	93081	bcgsc.ca	37	13	103418839	103418839	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	101	7	68	0	21	21	0	0	0
COL4A2	1284	ucsc.edu	37	13	111080930	111080930	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	56	0	0	0	0	0	0
MCF2L	23263	ucsc.edu;bcgsc.ca	37	13	113679006	113679006	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	95	11	134	0	38	38	0	0	0
GAS6	2621	bcgsc.ca	37	13	114526503	114526503	+	Missense_Mutation	SNP	C	C	A	rs7992146	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	75	7	101	0	170	169	1	0	0
RASA3	22821	bcgsc.ca	37	13	114782758	114782758	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	125	8	217	0	15	15	0	0	0
TEP1	7011	ucsc.edu;bcgsc.ca	37	14	20852281	20852281	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	90	9	142	0	8	8	0	0	0
APEX1	328	ucsc.edu	37	14	20925313	20925313	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	78	0	119	119	0	0	0
PNP	4860	bcgsc.ca	37	14	20944558	20944558	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	140	10	133	0	150	150	0	0	0
ARHGEF40	55701	ucsc.edu;bcgsc.ca	37	14	21553970	21553970	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	66	9	84	0	12	12	0	0	0
CHD8	57680	ucsc.edu	37	14	21873490	21873490	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	31	0	8	8	0	0	0
CHD8	57680	ucsc.edu	37	14	21899025	21899025	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	36	0	13	13	0	0	0
METTL3	56339	ucsc.edu	37	14	21979335	21979335	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	45	0	9	9	0	0	0
MMP14	4323	ucsc.edu	37	14	23314467	23314467	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	5	27	0	0	0	0	0	0
MYH6	4624	bcgsc.ca	37	14	23876272	23876272	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	404	15	612	0	0	0	0	0	0
RNF31	55072	ucsc.edu	37	14	24620096	24620096	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	70	0	1	1	0	0	0
RNF31	55072	ucsc.edu	37	14	24620805	24620805	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	78	0	23	23	0	0	0
RNF31	55072	ucsc.edu	37	14	24621032	24621032	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	66	6	166	2	21	21	0	0	0
CHMP4A	29082	ucsc.edu	37	14	24680707	24680707	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	54	0	57	57	0	0	0
TINF2	26277	bcgsc.ca	37	14	24710423	24710423	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	262	11	341	0	0	0	0	0	0
RABGGTA	5875	ucsc.edu	37	14	24736966	24736966	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	5	50	0	21	21	0	0	0
SCFD1	23256	bcgsc.ca	37	14	31191717	31191717	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	231	14	116	0	15	15	0	0	0
STRN3	29966	bcgsc.ca	37	14	31374759	31374759	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	191	10	160	0	0	0	0	0	0
HECTD1	25831	bcgsc.ca	37	14	31598212	31598212	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	113	9	168	0	34	34	0	0	0
HECTD1	25831	bcgsc.ca	37	14	31613347	31613347	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	132	10	64	0	7	7	0	0	0
AKAP6	9472	bcgsc.ca	37	14	33290607	33290607	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	116	9	105	0	0	0	0	0	0
AKAP6	9472	ucsc.edu	37	14	33290945	33290945	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	6	67	0	6	6	0	0	0
FAM177A1	283635	bcgsc.ca	37	14	35548147	35548147	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	125	9	83	0	50	50	0	0	0
PSMA6	5687	bcgsc.ca	37	14	35782144	35782144	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	322	16	264	0	61	61	0	0	0
INSM2	84684	ucsc.edu	37	14	36005014	36005014	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	55	0	0	0	0	0	0
RALGAPA1	253959	ucsc.edu	37	14	36155751	36155751	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	7	36	0	0	0	0	0	0
NKX2-1	7080	ucsc.edu	37	14	36988503	36988503	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	40	0	0	0	0	0	0
PAX9	5083	ucsc.edu	37	14	37132710	37132710	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	119	0	5	5	0	0	0
PNN	5411	bcgsc.ca	37	14	39645313	39645313	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	127	9	87	1	70	70	0	0	0
PNN	5411	bcgsc.ca	37	14	39651035	39651035	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	112	9	76	0	55	55	0	0	0
ERO1L	30001	bcgsc.ca	37	14	53138527	53138527	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	132	11	77	0	0	0	0	0	0
TMEM260	0	bcgsc.ca	37	14	57075923	57075923	+	Silent	SNP	C	C	A	rs140983222	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	295	13	461	0	14	14	0	0	0
TMEM260	0	ucsc.edu	37	14	57083900	57083900	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	72	7	36	0	0	0	0	0	0
ARID4A	5926	bcgsc.ca	37	14	58772826	58772826	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	145	8	110	0	0	0	0	0	0
DACT1	51339	bcgsc.ca	37	14	59108365	59108365	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	263	13	229	0	2	2	0	0	0
SIX4	51804	bcgsc.ca	37	14	61186603	61186603	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	170	11	250	3	4	4	0	0	0
SIX4	51804	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	61190290	61190290	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	9	26	0	3	1	2	0	0
SYNE2	23224	bcgsc.ca	37	14	64488165	64488165	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	101	7	102	0	37	37	0	0	0
SYNE2	23224	bcgsc.ca	37	14	64680997	64680997	+	Missense_Mutation	SNP	G	G	T	rs140857065	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	131	9	182	0	117	117	0	0	0
PLEKHG3	26030	ucsc.edu	37	14	65210080	65210080	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	4	79	1	46	46	0	0	0
PLEK2	26499	ucsc.edu	37	14	67864500	67864500	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	17	4	35	0	9	9	0	0	0
SLC8A3	6547	ucsc.edu	37	14	70512765	70512765	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	4	50	0	0	0	0	0	0
SLC8A3	6547	ucsc.edu;bcgsc.ca	37	14	70512973	70512973	+	Silent	SNP	C	C	A	rs148785844	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	55	8	70	0	0	0	0	0	0
SIPA1L1	26037	bcgsc.ca	37	14	72165713	72165713	+	Silent	SNP	G	G	T	rs199769945	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	136	8	145	1	36	36	0	0	0
RGS6	9628	bcgsc.ca	37	14	72924996	72924996	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	123	9	115	0	0	0	0	0	0
PSEN1	5663	ucsc.edu	37	14	73614814	73614814	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	33	0	0	0	0	0	0
NUMB	8650	bcgsc.ca	37	14	73753916	73753916	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	127	7	120	0	85	85	0	0	0
HEATR4	399671	bcgsc.ca	37	14	73989691	73989691	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	158	10	203	0	0	0	0	0	0
ENTPD5	957	ucsc.edu	37	14	74454591	74454591	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	44	0	0	0	0	0	0
CCDC176	80127	ucsc.edu	37	14	74489742	74489742	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	30	0	2	2	0	0	0
VSX2	338917	ucsc.edu	37	14	74727339	74727339	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	16	0	0	0	0	0	0
PGF	5228	bcgsc.ca	37	14	75416087	75416087	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	86	8	120	0	1	1	0	0	0
MLH3	27030	bcgsc.ca	37	14	75489711	75489711	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	223	10	173	0	1	1	0	0	0
JDP2	122953	ucsc.edu	37	14	75936060	75936060	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	56	0	4	4	0	0	0
KIAA1737	85457	bcgsc.ca	37	14	77576243	77576243	+	Silent	SNP	G	G	T	rs78346456	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	82	7	115	0	6	6	0	0	0
TSHR	7253	bcgsc.ca	37	14	81609692	81609692	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	199	14	221	0	0	0	0	0	0
STON2	85439	bcgsc.ca	37	14	81743579	81743579	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	138	8	179	1	27	27	0	0	0
SEL1L	6400	bcgsc.ca	37	14	81969206	81969206	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	157	10	135	0	45	45	0	0	0
GPR65	8477	bcgsc.ca	37	14	88477643	88477643	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	186	12	192	0	2	2	0	0	0
KCNK13	56659	ucsc.edu	37	14	90651245	90651245	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	65	0	0	0	0	0	0
TC2N	123036	bcgsc.ca	37	14	92251611	92251611	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	526	21	506	1	10	10	0	0	0
TRIP11	9321	ucsc.edu	37	14	92505901	92505901	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	55	0	0	0	0	0	0
CPSF2	53981	ucsc.edu;bcgsc.ca	37	14	92624008	92624008	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	6	40	0	0	0	0	0	0
SLC24A4	123041	ucsc.edu	37	14	92790233	92790233	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	5	31	0	0	0	0	0	0
SLC24A4	123041	ucsc.edu	37	14	92953076	92953076	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	60	0	0	0	0	0	0
TMEM251	26175	bcgsc.ca	37	14	93652633	93652633	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	209	13	190	1	22	22	0	0	0
UBR7	55148	ucsc.edu	37	14	93677053	93677053	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	33	0	0	0	0	0	0
FAM181A	90050	ucsc.edu	37	14	94395121	94395121	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	72	0	0	0	0	0	0
DDX24	57062	bcgsc.ca	37	14	94545407	94545407	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	150	8	163	1	77	77	0	0	0
IFI27	3429	ucsc.edu;bcgsc.ca	37	14	94582796	94582796	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	6	37	0	844	844	0	0	0
SERPINA6	866	bcgsc.ca	37	14	94780498	94780498	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	208	12	166	0	5	5	0	0	0
SERPINA12	145264	bcgsc.ca	37	14	94956068	94956068	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	104	8	128	1	0	0	0	0	0
SERPINA12	145264	bcgsc.ca	37	14	94962888	94962888	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	203	10	235	1	0	0	0	0	0
SERPINA13P	388007	ucsc.edu	37	14	95109850	95109850	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	59	1	0	0	0	0	0
DICER1	23405	bcgsc.ca	37	14	95557560	95557560	+	Missense_Mutation	SNP	G	G	T	rs187288681		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	328	21	382	0	15	15	0	0	0
TCL6	27004	bcgsc.ca	37	14	96134468	96134468	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	99	8	85	0	0	0	0	0	0
ATG2B	55102	ucsc.edu	37	14	96771949	96771949	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	8	77	2	0	0	0	0	0
BCL11B	64919	ucsc.edu	37	14	99642533	99642533	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	48	0	0	0	0	0	0
SNORD114-2	767578	bcgsc.ca	37	14	101418215	101418215	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	184	12	129	0	0	0	0	0	0
MIR1185-2	100302209	ucsc.edu;bcgsc.ca	37	14	101510596	101510596	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	64	8	89	0	0	0	0	0	0
HSP90AA1	3320	bcgsc.ca	37	14	102550230	102550230	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	116	9	96	0	415	415	0	0	0
CDC42BPB	9578	ucsc.edu	37	14	103418851	103418851	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	47	0	78	78	0	0	0
CDC42BPB	9578	ucsc.edu	37	14	103418855	103418855	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	5	48	0	96	96	0	0	0
AHNAK2	113146	bcgsc.ca	37	14	105410313	105410313	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	258	13	474	1	50	50	0	0	0
AHNAK2	113146	ucsc.edu	37	14	105420990	105420990	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	18	0	37	37	0	0	0
MTA1	9112	ucsc.edu	37	14	105920561	105920561	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	67	0	30	30	0	0	0
MTA1	9112	ucsc.edu	37	14	105924652	105924652	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	79	0	40	40	0	0	0
ELK2AP	2003	bcgsc.ca	37	14	106135100	106135100	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	224	15	343	0	0	0	0	0	0
CHEK2P2	646096	bcgsc.ca	37	15	20489500	20489500	+	RNA	SNP	G	G	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	114	22	94	4	0	0	0	0	0
CHEK2P2	646096	bcgsc.ca	37	15	20489504	20489504	+	RNA	SNP	A	A	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	105	20	88	2	0	0	0	0	0
NF1P2	440225	bcgsc.ca	37	15	21134241	21134241	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	152	11	130	0	0	0	0	0	0
NPAP1	23742	bcgsc.ca	37	15	24922629	24922629	+	Missense_Mutation	SNP	G	G	T	rs72691546	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	237	11	314	0	0	0	0	0	0
NPAP1	23742	bcgsc.ca	37	15	24922974	24922974	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	152	10	190	0	0	0	0	0	0
GABRB3	2562	ucsc.edu	37	15	26825561	26825561	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	74	7	138	1	0	0	0	0	0
GABRG3	2567	hgsc.bcm.edu	37	15	27777872	27777876	+	Frame_Shift_Del	DEL	TTCTT	TTCTT	-	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	TTCTT	TTCTT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	14	63	0	0	0	0	0	0
TJP1	7082	bcgsc.ca	37	15	30064341	30064341	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	85	6	64	0	17	17	0	0	0
KLF13	51621	ucsc.edu	37	15	31664325	31664325	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	87	0	31	31	0	0	0
OTUD7A	161725	ucsc.edu	37	15	31776742	31776742	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	52	0	2	2	0	0	0
RYR3	6263	ucsc.edu	37	15	34032097	34032097	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	55	0	0	0	0	0	0
RYR3	6263	ucsc.edu	37	15	34150115	34150115	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	69	0	0	0	0	0	0
SLC12A6	9990	ucsc.edu	37	15	34544586	34544586	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	42	1	0	0	0	0	0
C15orf55	256646	bcgsc.ca	37	15	34648789	34648789	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	105	9	172	0	0	0	0	0	0
C15orf55	256646	ucsc.edu	37	15	34649605	34649605	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	110	0	0	0	0	0	0
GJD2	57369	ucsc.edu	37	15	35045558	35045558	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	56	0	0	0	0	0	0
C15orf41	84529	ucsc.edu	37	15	37100693	37100693	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	35	0	4	4	0	0	0
C15orf53	400359	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	38988925	38988925	+	Silent	SNP	G	G	C	rs146995135	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	86	32	145	1	0	0	0	0	0
GPR176	11245	bcgsc.ca	37	15	40093561	40093561	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	124	9	227	2	2	2	0	0	0
DISP2	85455	ucsc.edu;bcgsc.ca	37	15	40661014	40661014	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	6	100	0	1	1	0	0	0
IVD	3712	ucsc.edu	37	15	40702907	40702907	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	82	0	58	58	0	0	0
IVD	3712	ucsc.edu	37	15	40702962	40702962	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	4	90	0	48	48	0	0	0
RMDN3	55177	bcgsc.ca	37	15	41030163	41030163	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	313	15	324	3	0	0	0	0	0
VPS18	57617	ucsc.edu	37	15	41195459	41195459	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	57	0	42	42	0	0	0
INO80	54617	bcgsc.ca	37	15	41280014	41280014	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	473	19	555	1	0	0	0	0	0
ITPKA	3706	ucsc.edu	37	15	41794208	41794208	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	60	0	1	1	0	0	0
RPAP1	26015	ucsc.edu;bcgsc.ca	37	15	41815128	41815128	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	10	62	0	23	12	11	0	0
MGA	23269	bcgsc.ca	37	15	42003280	42003280	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	275	15	277	0	7	7	0	0	0
MAPKBP1	23005	ucsc.edu	37	15	42115393	42115393	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	69	2	10	10	0	0	0
MAPKBP1	23005	ucsc.edu	37	15	42117458	42117458	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	73	0	11	11	0	0	0
SPTBN5	51332	ucsc.edu	37	15	42169434	42169434	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	58	0	2	2	0	0	0
SPTBN5	51332	ucsc.edu	37	15	42170799	42170799	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	40	0	7	6	0	1	0
SPTBN5	51332	ucsc.edu	37	15	42170818	42170818	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	40	0	0	0	0	0	0
PLA2G4D	283748	ucsc.edu	37	15	42363420	42363420	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	42	0	0	0	0	0	0
ZFP106	64397	bcgsc.ca	37	15	42742044	42742044	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	287	14	326	1	9	9	0	0	0
LRRC57	255252	bcgsc.ca	37	15	42840437	42840437	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	150	9	201	0	0	0	0	0	0
CDAN1	146059	ucsc.edu	37	15	43022923	43022923	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	30	0	6	6	0	0	0
MAP1A	4130	ucsc.edu	37	15	43818789	43818789	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	112	0	3	3	0	0	0
MAP1A	4130	ucsc.edu	37	15	43821499	43821499	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	114	1	7	7	0	0	0
STRC	161497	bcgsc.ca	37	15	43903149	43903149	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	179	12	271	1	1	1	0	0	0
PDIA3	2923	bcgsc.ca	37	15	44046026	44046026	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	143	10	115	0	0	0	0	0	0
MFAP1	4236	bcgsc.ca	37	15	44106724	44106724	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	290	15	243	1	34	34	0	0	0
MFAP1	4236	bcgsc.ca	37	15	44109581	44109581	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	179	11	182	0	22	22	0	0	0
DUOXA2	405753	ucsc.edu	37	15	45408831	45408831	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	79	0	0	0	0	0	0
DUOX1	53905	bcgsc.ca	37	15	45433260	45433260	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	157	10	203	1	0	0	0	0	0
DUOX1	53905	ucsc.edu	37	15	45434180	45434180	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	96	0	0	0	0	0	0
SLC30A4	7782	bcgsc.ca	37	15	45803336	45803336	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	288	16	281	2	0	0	0	0	0
SLC12A1	6557	bcgsc.ca	37	15	48539117	48539117	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	294	15	365	0	1	1	0	0	0
FBN1	2200	bcgsc.ca	37	15	48777667	48777667	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	173	11	122	0	4	4	0	0	0
CEP152	22995	bcgsc.ca	37	15	49088258	49088258	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	156	11	144	0	1	1	0	0	0
DTWD1	56986	broad.mit.edu	37	15	49926740	49926740	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	175	6	97	0	0	0	0	0	0
GABPB1	2553	bcgsc.ca	37	15	50578247	50578247	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	227	11	159	0	0	0	0	0	0
USP50	373509	ucsc.edu	37	15	50836825	50836825	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	55	0	1	1	0	0	0
SPPL2A	84888	ucsc.edu	37	15	51024809	51024809	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	25	0	0	0	0	0	0
DYX1C1	161582	bcgsc.ca	37	15	55783358	55783358	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	191	10	153	0	6	6	0	0	0
PRTG	283659	bcgsc.ca	37	15	55965831	55965831	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	176	11	178	0	1	1	0	0	0
RFX7	64864	ucsc.edu	37	15	56388240	56388240	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	46	0	6	6	0	0	0
ALDH1A2	8854	bcgsc.ca	37	15	58247467	58247467	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	89	8	157	0	0	0	0	0	0
AQP9	366	bcgsc.ca	37	15	58465346	58465346	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	274	14	309	0	1	1	0	0	0
RNF111	54778	ucsc.edu	37	15	59348031	59348031	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	6	53	1	0	0	0	0	0
VPS13C	54832	bcgsc.ca	37	15	62219327	62219327	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	194	14	198	1	23	23	0	0	0
C2CD4A	145741	ucsc.edu	37	15	62359941	62359941	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	54	0	1	1	0	0	0
TLN2	83660	bcgsc.ca	37	15	63053910	63053910	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	197	10	260	0	29	29	0	0	0
HERC1	8925	ucsc.edu	37	15	64005069	64005069	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	51	1	8	8	0	0	0
HERC1	8925	bcgsc.ca	37	15	64019971	64019971	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	91	8	97	0	6	6	0	0	0
ZNF609	23060	ucsc.edu	37	15	64792315	64792315	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	55	0	9	9	0	0	0
ZNF609	23060	bcgsc.ca	37	15	64967930	64967930	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	167	9	297	0	20	20	0	0	0
MTFMT	123263	bcgsc.ca	37	15	65297261	65297261	+	Silent	SNP	C	C	A	rs34636936	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	185	9	104	0	1	1	0	0	0
IGDCC4	57722	ucsc.edu	37	15	65678969	65678969	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	57	0	1	1	0	0	0
IGDCC4	57722	ucsc.edu	37	15	65681281	65681281	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	41	0	4	4	0	0	0
DENND4A	10260	ucsc.edu	37	15	65983244	65983244	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	46	0	7	7	0	0	0
MEGF11	84465	ucsc.edu	37	15	66207937	66207937	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	5	55	0	0	0	0	0	0
DIS3L	115752	bcgsc.ca	37	15	66610841	66610841	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	234	10	202	0	15	15	0	0	0
LCTL	197021	bcgsc.ca	37	15	66850104	66850104	+	Missense_Mutation	SNP	G	G	T	rs200063378	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	141	10	197	0	0	0	0	0	0
LCTL	197021	bcgsc.ca	37	15	66853385	66853385	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	105	7	125	0	0	0	0	0	0
ITGA11	22801	ucsc.edu	37	15	68650863	68650863	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	51	0	5	5	0	0	0
TLE3	7090	ucsc.edu	37	15	70346891	70346891	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	54	0	19	19	0	0	0
TLE3	7090	ucsc.edu	37	15	70347484	70347484	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	6	101	0	16	16	0	0	0
THSD4	79875	bcgsc.ca	37	15	71704086	71704086	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	7	99	0	0	0	0	0	0
PARP6	56965	ucsc.edu	37	15	72548830	72548830	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	62	0	33	33	0	0	0
ARIH1	25820	bcgsc.ca	37	15	72862584	72862584	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	132	9	114	0	28	28	0	0	0
PML	5371	ucsc.edu	37	15	74325583	74325583	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	82	0	33	33	0	0	0
EDC3	80153	bcgsc.ca	37	15	74967448	74967448	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	411	18	453	0	5	5	0	0	0
SCAMP2	10066	ucsc.edu	37	15	75137510	75137510	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	40	0	235	235	0	0	0
SIN3A	25942	bcgsc.ca	37	15	75682114	75682114	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	190	13	183	0	27	27	0	0	0
WDR61	80349	bcgsc.ca	37	15	78587312	78587312	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	8	101	0	1	1	0	0	0
RASGRF1	5923	ucsc.edu	37	15	79317675	79317675	+	Missense_Mutation	SNP	C	C	A	rs148722229	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	6	104	0	0	0	0	0	0
RASGRF1	5923	ucsc.edu	37	15	79324507	79324507	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	58	0	0	0	0	0	0
FSD2	123722	ucsc.edu	37	15	83428156	83428156	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	45	0	0	0	0	0	0
C15orf40	123207	bcgsc.ca	37	15	83678989	83678989	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	247	13	267	1	2	2	0	0	0
ADAMTSL3	57188	bcgsc.ca	37	15	84558939	84558939	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	112	9	131	0	3	3	0	0	0
ZSCAN2	54993	ucsc.edu	37	15	85147251	85147251	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	80	1	5	5	0	0	0
ALPK3	57538	ucsc.edu	37	15	85383163	85383163	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	36	0	17	17	0	0	0
ALPK3	57538	ucsc.edu	37	15	85401014	85401014	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	85	0	15	15	0	0	0
ALPK3	57538	ucsc.edu	37	15	85407892	85407892	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	7	63	0	0	0	0	0	0
KLHL25	64410	ucsc.edu	37	15	86312554	86312554	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	87	0	2	2	0	0	0
AGBL1	123624	ucsc.edu;bcgsc.ca	37	15	86807665	86807665	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	6	58	0	0	0	0	0	0
DET1	55070	ucsc.edu	37	15	89071003	89071003	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	6	49	0	4	4	0	0	0
ACAN	176	ucsc.edu	37	15	89402046	89402046	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	52	0	0	0	0	0	0
POLG	5428	bcgsc.ca	37	15	89860690	89860690	+	Missense_Mutation	SNP	C	C	A	rs199678775	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	72	7	100	1	41	41	0	0	0
RHCG	51458	ucsc.edu	37	15	90022662	90022662	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	43	0	0	0	0	0	0
KIF7	374654	ucsc.edu	37	15	90176101	90176101	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	5	55	0	2	2	0	0	0
WDR93	56964	bcgsc.ca	37	15	90276248	90276248	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	240	13	260	1	1	1	0	0	0
ANPEP	290	bcgsc.ca	37	15	90328680	90328680	+	Missense_Mutation	SNP	C	C	A	rs199983054	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	244	12	252	0	334	334	0	0	0
SEMA4B	10509	ucsc.edu	37	15	90767097	90767097	+	Silent	SNP	C	C	A	rs199930724	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	92	0	39	39	0	0	0
SEMA4B	10509	ucsc.edu	37	15	90771468	90771468	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	40	0	67	67	0	0	0
IQGAP1	8826	bcgsc.ca	37	15	91010811	91010811	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	152	8	119	0	0	0	0	0	0
BLM	641	bcgsc.ca	37	15	91292932	91292932	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	82	8	53	0	0	0	0	0	0
HDDC3	374659	bcgsc.ca	37	15	91475004	91475004	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	139	10	211	0	36	36	0	0	0
SV2B	9899	bcgsc.ca	37	15	91811776	91811776	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	159	10	166	1	0	0	0	0	0
CHD2	1106	ucsc.edu	37	15	93444482	93444482	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	5	22	0	15	15	0	0	0
SPATA8	145946	ucsc.edu	37	15	97326957	97326957	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	67	0	0	0	0	0	0
TMEM8A	58986	ucsc.edu	37	16	424856	424856	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	57	0	125	125	0	0	0
RAB11FIP3	9727	bcgsc.ca	37	16	570498	570498	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	128	8	137	0	99	99	0	0	0
C16orf11	146325	ucsc.edu	37	16	615226	615226	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	36	0	0	0	0	0	0
CCDC78	124093	bcgsc.ca	37	16	775276	775276	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	137	11	132	0	11	11	0	0	0
UNKL	64718	ucsc.edu	37	16	1416356	1416356	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	30	0	12	12	0	0	0
IFT140	9742	ucsc.edu	37	16	1652402	1652402	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	7	49	0	25	25	0	0	0
NUBP2	10101	ucsc.edu	37	16	1836822	1836822	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	61	0	100	100	0	0	0
MSRB1	51734	bcgsc.ca	37	16	1991330	1991330	+	Silent	SNP	C	C	A	rs138240339	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	73	8	63	0	306	305	0	1	0
RPL3L	6123	ucsc.edu	37	16	2003991	2003991	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	49	0	0	0	0	0	0
NOXO1	124056	ucsc.edu	37	16	2030179	2030179	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	15	0	1	1	0	0	0
PKD1	5310	ucsc.edu	37	16	2159598	2159598	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	38	0	14	14	0	0	0
PKD1	5310	ucsc.edu	37	16	2160184	2160184	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	42	0	10	10	0	0	0
RNPS1	10921	ucsc.edu	37	16	2313279	2313279	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	5	56	0	0	0	0	0	0
CCNF	899	ucsc.edu	37	16	2506577	2506577	+	Silent	SNP	C	C	A	rs149659964	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	65	0	3	3	0	0	0
C16orf59	80178	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	2511752	2511752	+	Silent	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	113	29	137	1	0	0	0	0	0
NTN3	4917	bcgsc.ca	37	16	2523456	2523456	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	193	10	197	0	0	0	0	0	0
ZNF200	7752	bcgsc.ca	37	16	3274043	3274043	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	437	21	369	0	5	5	0	0	0
NAA60	79903	ucsc.edu	37	16	3526325	3526325	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	38	0	65	65	0	0	0
NLRC3	197358	ucsc.edu	37	16	3591883	3591883	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	36	0	1	1	0	0	0
SLX4	84464	bcgsc.ca	37	16	3656572	3656572	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	337	14	314	1	0	0	0	0	0
ADCY9	115	bcgsc.ca	37	16	4015916	4015916	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	121	10	116	0	73	72	1	0	0
CORO7	79585	ucsc.edu	37	16	4409302	4409302	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	42	0	1	1	0	0	0
VASN	114990	ucsc.edu	37	16	4432425	4432425	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	35	0	125	125	0	0	0
DNAJA3	9093	ucsc.edu	37	16	4504909	4504909	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	46	0	20	20	0	0	0
ANKS3	124401	bcgsc.ca	37	16	4751031	4751031	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	306	17	381	1	12	12	0	0	0
GLYR1	84656	ucsc.edu	37	16	4864628	4864628	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	6	52	0	43	43	0	0	0
ATF7IP2	80063	bcgsc.ca	37	16	10525248	10525248	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	203	11	95	0	1	1	0	0	0
TVP23A	780776	ucsc.edu	37	16	10868829	10868829	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	22	0	0	0	0	0	0
BFAR	51283	bcgsc.ca	37	16	14742419	14742419	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	237	10	189	1	102	102	0	0	0
ABCC6	368	ucsc.edu	37	16	16248578	16248578	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	5	47	0	10	10	0	0	0
ABCC6	368	bcgsc.ca	37	16	16256868	16256868	+	Missense_Mutation	SNP	G	G	T	rs142128765	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	372	15	306	1	5	5	0	0	0
NOMO3	408050	bcgsc.ca	37	16	16357002	16357002	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	397	17	374	3	33	33	0	0	0
RPS15A	6210	bcgsc.ca	37	16	18796070	18796070	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	368	16	277	3	1	1	0	0	0
TMC5	79838	bcgsc.ca	37	16	19475282	19475282	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	126	10	102	1	0	0	0	0	0
TMC5	79838	bcgsc.ca	37	16	19490786	19490786	+	Silent	SNP	C	C	A	rs201640346	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	535	19	386	3	1	1	0	0	0
C16orf62	57020	bcgsc.ca	37	16	19661779	19661779	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	192	10	160	0	0	0	0	0	0
DNAH3	55567	ucsc.edu	37	16	20948033	20948033	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	20	0	0	0	0	0	0
DNAH3	55567	bcgsc.ca	37	16	21008630	21008630	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	114	8	111	0	0	0	0	0	0
DNAH3	55567	bcgsc.ca	37	16	21063187	21063187	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	170	10	150	0	0	0	0	0	0
SCNN1B	6338	ucsc.edu	37	16	23359973	23359973	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	40	0	0	0	0	0	0
SCNN1B	6338	bcgsc.ca	37	16	23391765	23391765	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	168	10	195	0	0	0	0	0	0
EARS2	124454	ucsc.edu;bcgsc.ca	37	16	23546255	23546255	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	9	41	0	25	25	0	0	0
TNRC6A	27327	bcgsc.ca	37	16	24816384	24816384	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	208	10	208	0	28	28	0	0	0
TNRC6A	27327	bcgsc.ca	37	16	24834265	24834265	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	194	11	143	1	31	31	0	0	0
GSG1L	146395	ucsc.edu	37	16	27856300	27856300	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	5	44	0	0	0	0	0	0
XPO6	23214	bcgsc.ca	37	16	28117757	28117757	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	220	12	133	0	16	16	0	0	0
CLN3	1201	ucsc.edu	37	16	28502882	28502882	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	52	0	1	1	0	0	0
IL27	246778	ucsc.edu	37	16	28511074	28511074	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	38	0	0	0	0	0	0
SULT1A2	6799	bcgsc.ca	37	16	28603625	28603625	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	275	14	273	1	2	2	0	0	0
ATXN2L	11273	bcgsc.ca	37	16	28841982	28841982	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	85	0	62	62	0	0	0
CD19	930	ucsc.edu	37	16	28943668	28943668	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	5	43	0	0	0	0	0	0
CD19	930	ucsc.edu	37	16	28948647	28948647	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	55	6	71	0	0	0	0	0	0
SLC7A5P1	81893	ucsc.edu	37	16	29624717	29624717	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	31	0	7	7	0	0	0
PRRT2	112476	ucsc.edu	37	16	29825115	29825115	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	64	1	0	0	0	0	0
CDIPT	10423	ucsc.edu	37	16	29871908	29871908	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	44	0	1	1	0	0	0
ZNF768	79724	ucsc.edu	37	16	30536240	30536240	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	55	1	183	183	0	0	0
STX4	6810	bcgsc.ca	37	16	31046334	31046334	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	197	9	154	0	68	68	0	0	0
C16orf58	64755	ucsc.edu	37	16	31508263	31508263	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	33	0	0	0	0	0	0
SHCBP1	79801	bcgsc.ca	37	16	46615794	46615794	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	154	11	118	0	3	3	0	0	0
VPS35	55737	bcgsc.ca	37	16	46694511	46694511	+	Missense_Mutation	SNP	G	G	T	rs80303950		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	195	11	121	0	130	130	0	0	0
DNAJA2	10294	bcgsc.ca	37	16	47005399	47005399	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	533	18	364	0	122	122	0	0	0
ABCC12	94160	bcgsc.ca	37	16	48158174	48158174	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	283	13	290	0	0	0	0	0	0
C16orf78	123970	bcgsc.ca	37	16	49433166	49433166	+	Nonsense_Mutation	SNP	G	G	T	rs199716634	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	162	9	116	0	0	0	0	0	0
CHD9	80205	bcgsc.ca	37	16	53330933	53330933	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	390	17	183	0	24	24	0	0	0
SLC6A2	6530	ucsc.edu;bcgsc.ca	37	16	55690642	55690642	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	6	78	0	0	0	0	0	0
NUDT21	11051	bcgsc.ca	37	16	56468326	56468326	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	237	13	121	0	26	26	0	0	0
BBS2	583	bcgsc.ca	37	16	56536654	56536654	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	189	10	141	0	53	53	0	0	0
MT1JP	4498	ucsc.edu	37	16	56670264	56670264	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	50	0	2	2	0	0	0
PLLP	51090	bcgsc.ca	37	16	57292455	57292455	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	99	7	72	0	230	230	0	0	0
CCL17	6361	ucsc.edu	37	16	57447908	57447908	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	37	0	0	0	0	0	0
CNGB1	1258	ucsc.edu	37	16	57945779	57945779	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	45	0	0	0	0	0	0
GOT2	2806	bcgsc.ca	37	16	58757693	58757693	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	591	24	491	4	109	109	0	0	0
CES3	23491	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	67000741	67000741	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	223	85	248	0	1	0	1	0	0
CES4A	283848	ucsc.edu	37	16	67035240	67035240	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	58	0	0	0	0	0	0
C16orf70	80262	bcgsc.ca	37	16	67159904	67159904	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	516	19	284	0	15	15	0	0	0
B3GNT9	84752	ucsc.edu	37	16	67183708	67183708	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	7	51	0	26	26	0	0	0
PLEKHG4	25894	ucsc.edu	37	16	67314246	67314246	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	55	0	0	0	0	0	0
PLEKHG4	25894	ucsc.edu	37	16	67318638	67318638	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	46	0	1	1	0	0	0
FAM65A	79567	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	67576026	67576026	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	155	35	139	0	102	73	29	0	0
CTCF	10664	bcgsc.ca	37	16	67645005	67645005	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	219	12	167	1	7	7	0	0	0
RANBP10	57610	ucsc.edu	37	16	67778300	67778300	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	64	0	29	29	0	0	0
SLC7A6	9057	bcgsc.ca	37	16	68328628	68328628	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	411	14	323	0	6	6	0	0	0
PRMT7	54496	bcgsc.ca	37	16	68391118	68391118	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	136	11	93	0	2	2	0	0	0
CDH3	1001	bcgsc.ca	37	16	68721437	68721437	+	Silent	SNP	G	G	T	rs147208782	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	112	8	105	0	2	2	0	0	0
TANGO6	79613	bcgsc.ca	37	16	68901016	68901016	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	263	12	193	0	5	5	0	0	0
TERF2	7014	bcgsc.ca	37	16	69419348	69419348	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	294	14	284	1	8	8	0	0	0
WWP2	11060	bcgsc.ca	37	16	69905722	69905722	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	134	10	176	0	26	26	0	0	0
WWP2	11060	bcgsc.ca	37	16	69965096	69965096	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	235	11	193	0	23	23	0	0	0
PHLPP2	23035	ucsc.edu;bcgsc.ca	37	16	71686897	71686897	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	105	10	70	1	4	4	0	0	0
PMFBP1	83449	bcgsc.ca	37	16	72188307	72188307	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	197	14	130	1	2	2	0	0	0
WDR59	79726	ucsc.edu;bcgsc.ca	37	16	74908337	74908337	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	63	0	0	0	0	0	0
WDR59	79726	bcgsc.ca	37	16	74943479	74943479	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	190	12	194	2	27	27	0	0	0
CTRB1	1504	bcgsc.ca	37	16	75258736	75258736	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	93	8	171	0	0	0	0	0	0
ADAMTS18	170692	bcgsc.ca	37	16	77325290	77325290	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	518	20	416	1	2	2	0	0	0
ADAMTS18	170692	bcgsc.ca	37	16	77369705	77369705	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	381	15	335	2	1	1	0	0	0
C16orf46	123775	bcgsc.ca	37	16	81095670	81095670	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	177	11	229	0	3	3	0	0	0
PLCG2	5336	ucsc.edu	37	16	81942156	81942156	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	46	0	3	3	0	0	0
PLCG2	5336	bcgsc.ca	37	16	81973522	81973522	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	239	12	154	0	2	2	0	0	0
TAF1C	9013	ucsc.edu	37	16	84213635	84213635	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	52	0	13	13	0	0	0
TAF1C	9013	ucsc.edu	37	16	84215255	84215255	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	52	0	55	55	0	0	0
KCNG4	93107	ucsc.edu	37	16	84270991	84270991	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	6	80	0	0	0	0	0	0
CRISPLD2	83716	hgsc.bcm.edu	37	16	84888432	84888432	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	148	8	193	2	0	0	0	0	0
ZDHHC7	55625	bcgsc.ca	37	16	85010701	85010701	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	277	16	198	0	0	0	0	0	0
GSE1	23199	ucsc.edu	37	16	85691168	85691168	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	11	0	40	40	0	0	0
GINS2	51659	bcgsc.ca	37	16	85712255	85712255	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	231	12	176	0	21	21	0	0	0
FBXO31	79791	bcgsc.ca	37	16	87367824	87367824	+	Silent	SNP	G	G	T	rs61115074	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	136	10	153	1	16	16	0	0	0
ANKRD11	29123	hgsc.bcm.edu;bcgsc.ca	37	16	89349905	89349905	+	Silent	SNP	G	G	T	rs150652124	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	245	13	238	1	41	41	0	0	0
CHMP1A	5119	ucsc.edu	37	16	89713041	89713041	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	23	0	140	139	0	0	0
CHMP1A	5119	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	89717999	89717999	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	75	43	89	0	144	47	97	0	0
CENPBD1	92806	bcgsc.ca	37	16	90038223	90038223	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	7	61	0	15	15	0	0	0
C16orf3	750	bcgsc.ca	37	16	90095730	90095730	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	148	8	144	0	0	0	0	0	0
NXN	64359	ucsc.edu	37	17	722779	722779	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	6	119	1	0	0	0	0	0
NXN	64359	ucsc.edu	37	17	726993	726993	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	67	0	0	0	0	0	0
ABR	29	bcgsc.ca	37	17	914028	914028	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	102	9	117	0	35	35	0	0	0
SMG6	23293	ucsc.edu	37	17	1968788	1968788	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	39	0	47	47	0	0	0
TSR1	55720	ucsc.edu	37	17	2238878	2238878	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	6	102	0	15	15	0	0	0
METTL16	79066	bcgsc.ca	37	17	2380980	2380980	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	109	9	97	0	0	0	0	0	0
CAMKK1	84254	ucsc.edu	37	17	3779556	3779556	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	83	0	14	14	0	0	0
ZZEF1	23140	ucsc.edu	37	17	3920790	3920790	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	7	99	0	7	7	0	0	0
UBE2G1	7326	bcgsc.ca	37	17	4186168	4186168	+	Missense_Mutation	SNP	G	G	T	rs141859867	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	77	7	59	0	49	48	0	1	0
MYBBP1A	10514	ucsc.edu	37	17	4449216	4449216	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	60	0	7	7	0	0	0
MYBBP1A	10514	ucsc.edu	37	17	4458245	4458245	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	57	0	0	0	0	0	0
SMTNL2	342527	ucsc.edu	37	17	4498562	4498562	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	6	85	0	49	49	0	0	0
ALOX15	246	ucsc.edu	37	17	4536475	4536475	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	85	0	0	0	0	0	0
ZMYND15	84225	ucsc.edu	37	17	4645216	4645216	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	121	0	0	0	0	0	0
MINK1	50488	ucsc.edu	37	17	4788886	4788886	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	70	2	26	26	0	0	0
CHRNE	1145	ucsc.edu;bcgsc.ca	37	17	4805228	4805228	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	70	7	124	0	10	10	0	0	0
RNF167	26001	bcgsc.ca	37	17	4845904	4845904	+	Silent	SNP	C	C	A	rs149050030	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	298	17	344	1	78	78	0	0	0
RNF167	26001	ucsc.edu	37	17	4846568	4846568	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	65	0	0	0	0	0	0
NLRP1	22861	ucsc.edu	37	17	5486059	5486059	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	72	1	0	0	0	0	0
AIPL1	23746	ucsc.edu	37	17	6329109	6329109	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	69	0	0	0	0	0	0
SLC13A5	284111	bcgsc.ca	37	17	6599181	6599181	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	208	11	330	1	0	0	0	0	0
ALOX12	239	ucsc.edu	37	17	6900180	6900180	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	68	0	13	13	0	0	0
ALOX12	239	ucsc.edu	37	17	6913791	6913791	+	RNA	SNP	A	A	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	11	31	0	0	0	0	0	0
POLR2A	5430	bcgsc.ca	37	17	7401131	7401131	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	9	178	0	31	31	0	0	0
CD68	968	ucsc.edu	37	17	7483789	7483789	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	78	0	0	0	0	0	0
FXR2	9513	ucsc.edu	37	17	7496411	7496411	+	Silent	SNP	G	G	T	rs61730843	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	46	0	43	43	0	0	0
DNAH2	146754	ucsc.edu	37	17	7689917	7689917	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	90	0	0	0	0	0	0
DNAH2	146754	ucsc.edu	37	17	7691282	7691282	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	73	7	120	1	0	0	0	0	0
KDM6B	23135	ucsc.edu;bcgsc.ca	37	17	7754485	7754485	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	78	8	149	0	39	39	0	0	0
CHD3	1107	bcgsc.ca	37	17	7802756	7802756	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	223	14	257	0	63	63	0	0	0
GUCY2D	3000	ucsc.edu	37	17	7910839	7910839	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	6	145	0	0	0	0	0	0
PFAS	5198	ucsc.edu	37	17	8171850	8171850	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	6	69	0	0	0	0	0	0
RANGRF	29098	ucsc.edu	37	17	8192820	8192820	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	105	0	2	2	0	0	0
ARHGEF15	22899	ucsc.edu	37	17	8218443	8218443	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	63	0	0	0	0	0	0
ODF4	146852	ucsc.edu	37	17	8243598	8243598	+	Missense_Mutation	SNP	C	C	A	rs73250854	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	78	0	0	0	0	0	0
RPL26	6154	bcgsc.ca	37	17	8285481	8285481	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	197	12	157	0	1937	1935	1	0	1
USP43	124739	ucsc.edu	37	17	9631376	9631376	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	79	0	5	5	0	0	0
GLP2R	9340	bcgsc.ca	37	17	9783724	9783724	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	324	15	292	0	0	0	0	0	0
ARHGAP44	9912	bcgsc.ca	37	17	12846968	12846968	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	125	9	148	0	5	5	0	0	0
TVP23C	201158	ucsc.edu	37	17	15457087	15457087	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	444	69	406	57	29	6	23	0	0
MPRIP	23164	bcgsc.ca	37	17	17053490	17053490	+	Silent	SNP	C	C	A	rs144170910	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	307	16	284	0	62	62	0	0	0
SREBF1	6720	ucsc.edu	37	17	17719259	17719259	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	93	0	44	44	0	0	0
DRG2	1819	bcgsc.ca	37	17	18007159	18007159	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	149	11	188	0	35	35	0	0	0
MYO15A	51168	ucsc.edu	37	17	18023000	18023000	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	6	137	0	0	0	0	0	0
MYO15A	51168	ucsc.edu	37	17	18034793	18034793	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	5	61	0	0	0	0	0	0
MYO15A	51168	ucsc.edu	37	17	18039950	18039950	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	57	0	0	0	0	0	0
MYO15A	51168	ucsc.edu	37	17	18063320	18063320	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	74	0	0	0	0	0	0
FLII	2314	ucsc.edu	37	17	18157438	18157438	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	45	0	90	90	0	0	0
TOP3A	7156	ucsc.edu	37	17	18181215	18181215	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	55	6	127	0	11	11	0	0	0
FBXW10	10517	bcgsc.ca	37	17	18673272	18673272	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	271	11	401	0	0	0	0	0	0
SLC5A10	125206	ucsc.edu;bcgsc.ca	37	17	18874340	18874340	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	6	85	0	42	42	0	0	0
SLC47A2	146802	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	19610045	19610045	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	32	123	1	3	2	1	0	0
SPECC1	92521	ucsc.edu	37	17	20130889	20130889	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	49	0	17	17	0	0	0
C17orf103	256302	ucsc.edu	37	17	21147451	21147451	+	Missense_Mutation	SNP	G	G	T	rs17855541		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	70	0	15	15	0	0	0
KCNJ18	100134444	bcgsc.ca	37	17	21319622	21319622	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	214	11	285	1	2	2	0	0	0
NOS2	4843	bcgsc.ca	37	17	26115864	26115864	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	208	13	346	2	2	2	0	0	0
NLK	51701	bcgsc.ca	37	17	26495519	26495519	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	434	18	335	1	20	20	0	0	0
SLC46A1	113235	ucsc.edu	37	17	26729322	26729322	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	30	0	15	15	0	0	0
SLC13A2	9058	ucsc.edu	37	17	26818460	26818460	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	55	6	118	0	0	0	0	0	0
FOXN1	8456	bcgsc.ca	37	17	26861442	26861442	+	Missense_Mutation	SNP	C	C	A	rs141965955	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	86	7	118	0	0	0	0	0	0
FOXN1	8456	ucsc.edu	37	17	26862215	26862215	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	38	0	0	0	0	0	0
SPAG5	10615	bcgsc.ca	37	17	26911492	26911492	+	Missense_Mutation	SNP	C	C	A	rs140086700	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	206	9	212	0	0	0	0	0	0
SUPT6H	6830	ucsc.edu	37	17	27024637	27024637	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	49	0	0	0	0	0	0
FAM222B	55731	ucsc.edu	37	17	27085361	27085361	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	65	0	25	25	0	0	0
CPD	1362	bcgsc.ca	37	17	28776574	28776574	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	135	9	114	0	2	2	0	0	0
ATAD5	79915	bcgsc.ca	37	17	29171915	29171915	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	210	13	129	0	2	2	0	0	0
OMG	4974	bcgsc.ca	37	17	29622506	29622506	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	162	11	139	0	0	0	0	0	0
SUZ12	23512	ucsc.edu	37	17	30315444	30315444	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	66	6	50	0	14	14	0	0	0
SUZ12	23512	ucsc.edu	37	17	30326019	30326019	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	46	0	12	12	0	0	0
ZNF207	7756	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	30696350	30696350	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	96	48	117	0	86	44	42	0	0
CCL7	6354	bcgsc.ca	37	17	32598755	32598755	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	103	8	104	0	0	0	0	0	0
RAD51D	5892	ucsc.edu	37	17	33427987	33427987	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	8	100	0	9	9	0	0	0
RAD51D	5892	ucsc.edu	37	17	33444000	33444000	+	Silent	SNP	G	G	T	rs199583918	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	68	1	0	0	0	0	0
CCL4	6351	bcgsc.ca	37	17	34432656	34432656	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	206	13	250	0	2	2	0	0	0
MYO19	80179	bcgsc.ca	37	17	34881146	34881146	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	255	14	347	0	20	20	0	0	0
GGNBP2	79893	bcgsc.ca	37	17	34945743	34945743	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	354	14	269	1	37	37	0	0	0
MRM1	79922	ucsc.edu	37	17	34958769	34958769	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	80	1	0	0	0	0	0
SYNRG	11276	ucsc.edu;bcgsc.ca	37	17	35936441	35936441	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	64	7	63	0	0	0	0	0	0
SYNRG	11276	bcgsc.ca	37	17	35937533	35937533	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	499	20	567	3	7	7	0	0	0
MRPL45	84311	ucsc.edu	37	17	36478173	36478173	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	75	0	0	0	0	0	0
SOCS7	30837	bcgsc.ca	37	17	36521269	36521269	+	Missense_Mutation	SNP	C	C	A	rs145376452	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	103	7	107	0	0	0	0	0	0
LRRC37A11P	342666	ucsc.edu	37	17	37186263	37186263	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	6	79	1	0	0	0	0	0
MED1	5469	ucsc.edu	37	17	37565540	37565540	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	6	87	0	12	12	0	0	0
GSDMA	284110	ucsc.edu	37	17	38126784	38126784	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	6	44	0	0	0	0	0	0
KRT20	54474	ucsc.edu	37	17	39041413	39041413	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	42	0	0	0	0	0	0
KRT37	8688	bcgsc.ca	37	17	39580696	39580696	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	126	9	148	1	0	0	0	0	0
JUP	3728	ucsc.edu	37	17	39923766	39923766	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	99	0	217	216	0	1	0
KLHL10	317719	bcgsc.ca	37	17	40004486	40004486	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	201	10	193	0	0	0	0	0	0
KLHL11	55175	bcgsc.ca	37	17	40010197	40010197	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	99	8	133	0	7	7	0	0	0
ACLY	47	ucsc.edu	37	17	40034383	40034383	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	58	0	99	99	0	0	0
KCNH4	23415	ucsc.edu	37	17	40318483	40318483	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	47	0	0	0	0	0	0
ATP6V0A1	535	ucsc.edu	37	17	40622191	40622191	+	Silent	SNP	C	C	A	rs151312037	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	33	0	29	29	0	0	0
NAGLU	4669	ucsc.edu	37	17	40690758	40690758	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	71	0	50	50	0	0	0
NAGLU	4669	bcgsc.ca	37	17	40693077	40693077	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	160	10	218	0	62	62	0	0	0
VPS25	84313	bcgsc.ca	37	17	40925496	40925496	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	133	9	218	0	15	14	1	0	0
AOC2	314	bcgsc.ca	37	17	40997539	40997539	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	90	7	103	0	0	0	0	0	0
AOC3	8639	ucsc.edu	37	17	41006507	41006507	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	98	0	0	0	0	0	0
AOC4	0	ucsc.edu	37	17	41020699	41020699	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	57	0	0	0	0	0	0
NBR1	4077	ucsc.edu	37	17	41342782	41342782	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	62	0	0	0	0	0	0
LSM12	124801	ucsc.edu	37	17	42141169	42141169	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	7	57	1	0	0	0	0	0
GRN	2896	ucsc.edu	37	17	42426628	42426628	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	74	0	183	183	0	0	0
EFTUD2	9343	bcgsc.ca	37	17	42929816	42929816	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	8	54	0	37	37	0	0	0
KIF18B	146909	ucsc.edu	37	17	43005659	43005659	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	38	0	0	0	0	0	0
KIF18B	146909	ucsc.edu	37	17	43006206	43006206	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	41	0	1	1	0	0	0
HEXIM2	124790	ucsc.edu	37	17	43246663	43246663	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	68	0	18	18	0	0	0
FMNL1	752	ucsc.edu	37	17	43313543	43313543	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	62	0	2	2	0	0	0
PLEKHM1	9842	ucsc.edu	37	17	43552826	43552826	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	4	82	0	3	3	0	0	0
CDC27	996	ucsc.edu	37	17	45221336	45221336	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	31	0	0	0	0	0	0
EFCAB13	124989	bcgsc.ca	37	17	45422404	45422404	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	365	16	208	0	3	3	0	0	0
EFCAB13	124989	bcgsc.ca	37	17	45487057	45487057	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	337	18	249	1	0	0	0	0	0
MRPL45P2	653479	ucsc.edu	37	17	45569834	45569834	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	6	138	0	0	0	0	0	0
OSBPL7	114881	ucsc.edu	37	17	45885711	45885711	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	70	0	13	13	0	0	0
PNPO	55163	bcgsc.ca	37	17	46022025	46022025	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	297	14	314	0	9	9	0	0	0
HOXB6	3216	ucsc.edu	37	17	46675135	46675135	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	17	4	23	0	13	13	0	0	0
KAT7	11143	bcgsc.ca	37	17	47874214	47874214	+	Missense_Mutation	SNP	C	C	A	rs199567018	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	249	12	268	1	19	19	0	0	0
SGCA	6442	ucsc.edu	37	17	48247555	48247555	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	86	1	0	0	0	0	0
COL1A1	1277	ucsc.edu	37	17	48270211	48270211	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	70	0	0	0	0	0	0
XYLT2	64132	ucsc.edu	37	17	48434438	48434438	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	91	1	16	16	0	0	0
ACSF2	80221	ucsc.edu;bcgsc.ca	37	17	48539645	48539645	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	76	8	97	0	0	0	0	0	0
ACSF2	80221	bcgsc.ca	37	17	48541200	48541200	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	254	14	377	1	5	5	0	0	0
RSAD1	55316	ucsc.edu	37	17	48560726	48560726	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	6	47	0	23	23	0	0	0
ABCC3	8714	ucsc.edu	37	17	48745362	48745362	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	73	0	1	1	0	0	0
WFIKKN2	124857	ucsc.edu	37	17	48916889	48916889	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	46	0	0	0	0	0	0
TOM1L1	10040	bcgsc.ca	37	17	53007453	53007453	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	127	8	102	0	35	35	0	0	0
C17orf67	339210	bcgsc.ca	37	17	54892231	54892231	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	532	21	665	0	0	0	0	0	0
C17orf67	339210	bcgsc.ca	37	17	54892321	54892321	+	Missense_Mutation	SNP	G	G	T	rs143175206	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	268	13	434	1	0	0	0	0	0
MPO	4353	ucsc.edu	37	17	56355333	56355333	+	Silent	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	93	0	0	0	0	0	0
MPO	4353	ucsc.edu	37	17	56357232	56357232	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	59	0	0	0	0	0	0
BZRAP1	9256	ucsc.edu	37	17	56383005	56383005	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	57	0	0	0	0	0	0
TRIM37	4591	bcgsc.ca	37	17	57093092	57093092	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	150	8	147	1	22	22	0	0	0
PRR11	55771	bcgsc.ca	37	17	57272144	57272144	+	Silent	SNP	C	C	A	rs148376550	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	133	10	79	0	1	1	0	0	0
GDPD1	284161	ucsc.edu;bcgsc.ca	37	17	57350241	57350241	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	75	8	79	0	0	0	0	0	0
DHX40	79665	ucsc.edu	37	17	57643047	57643047	+	Silent	SNP	C	C	A	rs138260089	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	37	0	18	18	0	0	0
DHX40	79665	ucsc.edu	37	17	57643102	57643102	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	38	0	14	14	0	0	0
HEATR6	63897	bcgsc.ca	37	17	58134654	58134654	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	89	7	124	0	21	21	0	0	0
USP32	84669	ucsc.edu;bcgsc.ca	37	17	58329765	58329765	+	Silent	SNP	C	C	A	rs61751977	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	79	9	66	0	11	11	0	0	0
PPM1D	8493	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	58740837	58740837	+	Missense_Mutation	SNP	G	G	A	rs200809297		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	104	52	109	0	15	9	6	0	0
BRIP1	83990	bcgsc.ca	37	17	59770850	59770850	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	228	12	188	0	1	1	0	0	0
INTS2	57508	bcgsc.ca	37	17	59947145	59947145	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	317	15	292	3	10	10	0	0	0
INTS2	57508	ucsc.edu	37	17	59981893	59981893	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	31	0	5	5	0	0	0
TANC2	26115	ucsc.edu	37	17	61271365	61271365	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	39	0	1	1	0	0	0
GH2	2689	bcgsc.ca	37	17	61958411	61958411	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	236	13	396	1	0	0	0	0	0
DDX5	1655	bcgsc.ca	37	17	62498176	62498176	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	144	10	99	0	3	3	0	0	0
PLEKHM1P	440456	ucsc.edu	37	17	62782833	62782833	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	39	0	0	0	0	0	0
CACNG4	27092	ucsc.edu;bcgsc.ca	37	17	65014304	65014304	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	81	8	89	0	0	0	0	0	0
PSMD12	5718	bcgsc.ca	37	17	65338329	65338329	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	361	16	264	1	5	5	0	0	0
BPTF	2186	ucsc.edu	37	17	65941613	65941613	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	68	1	11	11	0	0	0
KPNA2	3838	bcgsc.ca	37	17	66039059	66039059	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	669	22	566	1	8	8	0	0	0
AMZ2	51321	bcgsc.ca	37	17	66246422	66246422	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	187	11	203	0	27	27	0	0	0
SLC16A6	9120	bcgsc.ca	37	17	66266991	66266991	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	77	7	103	0	0	0	0	0	0
ABCA8	10351	ucsc.edu	37	17	66864263	66864263	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	35	0	1	1	0	0	0
ABCA9	10350	bcgsc.ca	37	17	67017992	67017992	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	241	12	128	0	0	0	0	0	0
ABCA9	10350	bcgsc.ca	37	17	67023204	67023204	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	108	7	112	1	0	0	0	0	0
ABCA6	23460	ucsc.edu;bcgsc.ca	37	17	67109393	67109393	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	82	10	77	0	1	1	0	0	0
SDK2	54549	ucsc.edu	37	17	71381994	71381994	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	22	0	0	0	0	0	0
SDK2	54549	ucsc.edu	37	17	71391493	71391493	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	107	0	0	0	0	0	0
DNAI2	64446	ucsc.edu	37	17	72295876	72295876	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	98	0	0	0	0	0	0
OTOP3	347741	ucsc.edu	37	17	72939742	72939742	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	6	74	0	0	0	0	0	0
OTOP3	347741	ucsc.edu	37	17	72943211	72943211	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	75	0	0	0	0	0	0
OTOP3	347741	ucsc.edu	37	17	72943361	72943361	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	38	0	0	0	0	0	0
ICT1	3396	ucsc.edu	37	17	73008931	73008931	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	57	0	33	33	0	0	0
NT5C	30833	bcgsc.ca	37	17	73127317	73127317	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	7	97	0	54	54	0	0	0
MIF4GD	57409	ucsc.edu	37	17	73263949	73263949	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	6	85	0	64	64	0	0	0
CASKIN2	57513	ucsc.edu	37	17	73503100	73503100	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	68	0	16	16	0	0	0
TSEN54	283989	bcgsc.ca	37	17	73515128	73515128	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	221	12	210	0	0	0	0	0	0
LLGL2	3993	ucsc.edu	37	17	73567809	73567809	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	74	0	79	79	0	0	0
FBF1	85302	ucsc.edu	37	17	73914074	73914074	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	5	42	0	2	2	0	0	0
EXOC7	23265	ucsc.edu	37	17	74080607	74080607	+	Silent	SNP	C	C	A	rs148929452	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	70	0	0	0	0	0	0
RNF157	114804	ucsc.edu	37	17	74141401	74141401	+	Missense_Mutation	SNP	C	C	A	rs190235226	by1000genomes;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	46	0	0	0	0	0	0
RNF157	114804	bcgsc.ca	37	17	74152327	74152327	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	141	10	175	0	0	0	0	0	0
RNF157	114804	ucsc.edu	37	17	74158697	74158697	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	41	0	0	0	0	0	0
QRICH2	84074	ucsc.edu	37	17	74283363	74283363	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	46	0	1	1	0	0	0
ST6GALNAC2	10610	ucsc.edu	37	17	74570447	74570447	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	45	0	1	1	0	0	0
MGAT5B	146664	bcgsc.ca	37	17	74936493	74936493	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	109	8	195	0	0	0	0	0	0
MGAT5B	146664	ucsc.edu	37	17	74942475	74942475	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	67	1	0	0	0	0	0
SEPT9	10801	ucsc.edu	37	17	75484903	75484903	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	96	0	221	221	0	0	0
TNRC6C	57690	ucsc.edu	37	17	76060977	76060977	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	34	0	2	2	0	0	0
TNRC6C	57690	ucsc.edu	37	17	76089201	76089201	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	38	0	0	0	0	0	0
DNAH17	8632	ucsc.edu	37	17	76528585	76528585	+	Silent	SNP	G	G	T	rs61741264	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	24	0	0	0	0	0	0
USP36	57602	ucsc.edu	37	17	76803568	76803568	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	63	0	21	21	0	0	0
LGALS3BP	3959	ucsc.edu	37	17	76972077	76972077	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	34	0	417	417	0	0	0
ENGASE	64772	bcgsc.ca	37	17	77073761	77073761	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	224	12	235	0	3	3	0	0	0
ENGASE	64772	ucsc.edu	37	17	77081761	77081761	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	69	0	19	19	0	0	0
ENPP7	339221	ucsc.edu	37	17	77704947	77704947	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	61	0	0	0	0	0	0
ENPP7	339221	ucsc.edu	37	17	77709305	77709305	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	70	0	0	0	0	0	0
ENPP7	339221	ucsc.edu	37	17	77709357	77709357	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	75	0	0	0	0	0	0
CCDC40	55036	ucsc.edu;bcgsc.ca	37	17	78069191	78069191	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	55	6	82	0	1	1	0	0	0
CCDC40	55036	ucsc.edu	37	17	78073421	78073421	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	80	0	3	3	0	0	0
RNF213	57674	bcgsc.ca	37	17	78321509	78321509	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	66	6	127	0	48	48	0	0	0
LOC100294362	0	bcgsc.ca	37	17	78346307	78346307	+	RNA	SNP	T	T	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	10	23	0	1	1	0	0	0
RNF213	57674	ucsc.edu	37	17	78360677	78360677	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	30	0	68	68	0	0	0
MIR657	724027	ucsc.edu	37	17	79099114	79099114	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	32	0	0	0	0	0	0
BAHCC1	57597	ucsc.edu	37	17	79424464	79424464	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	15	4	19	0	2	2	0	0	0
P4HB	5034	ucsc.edu	37	17	79803576	79803576	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	70	0	496	496	0	0	0
GPS1	2873	ucsc.edu	37	17	80014728	80014728	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	32	0	3	3	0	0	0
SLC16A3	9123	ucsc.edu	37	17	80193908	80193908	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	53	0	17	17	0	0	0
SLC16A3	9123	ucsc.edu	37	17	80195694	80195694	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	63	0	42	42	0	0	0
HEXDC	284004	bcgsc.ca	37	17	80382285	80382285	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	140	10	187	0	18	18	0	0	0
TBCD	6904	bcgsc.ca	37	17	80726374	80726374	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	216	11	254	0	20	20	0	0	0
TBCD	6904	ucsc.edu	37	17	80895934	80895934	+	Missense_Mutation	SNP	G	G	T	rs17856082	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	54	0	0	0	0	0	0
CLUL1	27098	ucsc.edu	37	18	627113	627113	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	5	96	0	0	0	0	0	0
MYOM1	8736	ucsc.edu	37	18	3168950	3168950	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	45	0	1	1	0	0	0
DLGAP1	9229	bcgsc.ca	37	18	3814243	3814243	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	173	11	183	0	4	4	0	0	0
EPB41L3	23136	bcgsc.ca	37	18	5396284	5396284	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	8	170	0	51	51	0	0	0
PTPRM	5797	ucsc.edu	37	18	8069876	8069876	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	39	0	48	48	0	0	0
ANKRD12	23253	ucsc.edu	37	18	9208696	9208696	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	72	7	80	0	7	7	0	0	0
ANKRD12	23253	bcgsc.ca	37	18	9275635	9275635	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	233	12	141	1	4	4	0	0	0
AFG3L2	10939	bcgsc.ca	37	18	12344173	12344173	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	143	10	149	2	86	86	0	0	0
PTPN2	5771	bcgsc.ca	37	18	12802024	12802024	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	262	13	165	1	17	17	0	0	0
POTEC	388468	bcgsc.ca	37	18	14542688	14542688	+	Missense_Mutation	SNP	G	G	T	rs181229726	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	158	11	297	1	0	0	0	0	0
MIR133A1	406922	ucsc.edu	37	18	19405727	19405727	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	6	26	0	0	0	0	0	0
CTAGE1	64693	ucsc.edu	37	18	19997766	19997766	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	52	0	0	0	0	0	0
RBBP8	5932	ucsc.edu	37	18	20577607	20577607	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	33	0	31	31	0	0	0
RIOK3	8780	ucsc.edu	37	18	21053590	21053590	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	30	0	1	1	0	0	0
LAMA3	3909	ucsc.edu	37	18	21451530	21451530	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	76	1	4	4	0	0	0
LAMA3	3909	ucsc.edu	37	18	21462009	21462009	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	4	38	0	0	0	0	0	0
LAMA3	3909	ucsc.edu;bcgsc.ca	37	18	21474930	21474930	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	6	56	0	18	18	0	0	0
ZNF521	25925	bcgsc.ca	37	18	22805396	22805396	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	237	11	216	0	0	0	0	0	0
SS18	6760	ucsc.edu	37	18	23598326	23598326	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	70	7	77	0	18	18	0	0	0
DSG4	147409	bcgsc.ca	37	18	28992890	28992890	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	155	10	136	0	0	0	0	0	0
DSG3	1830	bcgsc.ca	37	18	29046521	29046521	+	Silent	SNP	G	G	T	rs199540300	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	189	10	177	1	0	0	0	0	0
B4GALT6	9331	bcgsc.ca	37	18	29205725	29205725	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	95	8	58	0	0	0	0	0	0
ASXL3	80816	ucsc.edu	37	18	31263369	31263369	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	42	0	0	0	0	0	0
DTNA	1837	ucsc.edu	37	18	32462133	32462133	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	45	0	7	7	0	0	0
KIAA1328	57536	ucsc.edu	37	18	34646991	34646991	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	59	0	2	2	0	0	0
SLC14A2	8170	ucsc.edu	37	18	43243772	43243772	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	61	0	0	0	0	0	0
CTIF	9811	ucsc.edu	37	18	46163048	46163048	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	55	0	0	0	0	0	0
SMAD7	4092	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	18	46447887	46447887	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	66	25	91	0	38	24	14	0	0
DYM	54808	ucsc.edu	37	18	46690066	46690066	+	Missense_Mutation	SNP	G	G	T	rs145279594	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	23	0	0	0	0	0	0
DYM	54808	bcgsc.ca	37	18	46906099	46906099	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	223	11	124	0	17	17	0	0	0
MYO5B	4645	bcgsc.ca	37	18	47365514	47365514	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	246	14	253	1	0	0	0	0	0
MYO5B	4645	ucsc.edu	37	18	47369631	47369631	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	78	0	78	78	0	0	0
CXXC1	30827	bcgsc.ca	37	18	47812195	47812195	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	87	7	150	1	14	14	0	0	0
BOD1L2	284257	ucsc.edu	37	18	54814871	54814871	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	57	0	0	0	0	0	0
NEDD4L	23327	bcgsc.ca	37	18	55992305	55992305	+	Silent	SNP	C	C	A	rs191431549	by1000genomes;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	245	10	347	1	46	46	0	0	0
MALT1	10892	ucsc.edu;bcgsc.ca	37	18	56390322	56390322	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	83	9	93	0	6	6	0	0	0
LMAN1	3998	bcgsc.ca	37	18	57016384	57016384	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	218	13	161	0	60	60	0	0	0
CDH20	28316	bcgsc.ca	37	18	59195429	59195429	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	303	14	293	0	0	0	0	0	0
PIGN	23556	ucsc.edu	37	18	59813249	59813249	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	43	0	0	0	0	0	0
ZCCHC2	54877	ucsc.edu	37	18	60242516	60242516	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	63	0	18	18	0	0	0
SERPINB8	5271	bcgsc.ca	37	18	61654194	61654194	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	168	11	143	0	1	1	0	0	0
CNDP2	55748	ucsc.edu	37	18	72176136	72176136	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	64	0	802	799	1	0	2
ZNF407	55628	bcgsc.ca	37	18	72344521	72344521	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	149	10	247	2	2	2	0	0	0
ZNF407	55628	bcgsc.ca	37	18	72345351	72345351	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	304	12	275	0	5	5	0	0	0
ZNF407	55628	ucsc.edu	37	18	72347538	72347538	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	49	0	2	2	0	0	0
TSHZ1	10194	ucsc.edu	37	18	72997764	72997764	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	63	1	14	14	0	0	0
ZNF236	7776	bcgsc.ca	37	18	74536359	74536359	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	152	10	154	0	0	0	0	0	0
ZNF236	7776	ucsc.edu	37	18	74611153	74611153	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	52	0	6	6	0	0	0
PPAP2C	8612	ucsc.edu	37	19	281500	281500	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	55	6	101	0	1	1	0	0	0
MIER2	54531	ucsc.edu	37	19	327892	327892	+	Missense_Mutation	SNP	G	G	T	rs201514181	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	53	0	8	8	0	0	0
HCN2	610	ucsc.edu	37	19	603580	603580	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	54	1	29	29	0	0	0
SBNO2	22904	ucsc.edu	37	19	1119580	1119580	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	42	0	21	21	0	0	0
CIRBP-AS1	148046	ucsc.edu	37	19	1269889	1269889	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	44	0	0	0	0	0	0
ATP8B3	148229	ucsc.edu	37	19	1790769	1790769	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	5	19	0	0	0	0	0	0
ATP8B3	148229	ucsc.edu;bcgsc.ca	37	19	1800299	1800299	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	7	95	0	10	10	0	0	0
ATP8B3	148229	ucsc.edu	37	19	1802564	1802564	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	60	0	5	5	0	0	0
AP3D1	8943	ucsc.edu	37	19	2110148	2110148	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	52	0	0	0	0	0	0
AP3D1	8943	ucsc.edu	37	19	2116716	2116716	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	37	0	78	78	0	0	0
DIRAS1	148252	ucsc.edu	37	19	2717461	2717461	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	62	0	5	5	0	0	0
THOP1	7064	ucsc.edu	37	19	2811665	2811665	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	81	0	25	25	0	0	0
TLE6	79816	ucsc.edu	37	19	2994920	2994920	+	Missense_Mutation	SNP	C	C	A	rs146997057	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	34	0	0	0	0	0	0
NFIC	4782	ucsc.edu	37	19	3433550	3433550	+	Silent	SNP	C	C	A	rs111422145	bycluster;byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	63	0	91	91	0	0	0
DOHH	83475	ucsc.edu	37	19	3494102	3494102	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	6	44	0	0	0	0	0	0
MRPL54	116541	ucsc.edu	37	19	3767333	3767333	+	Missense_Mutation	SNP	G	G	T	rs193018828	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	65	0	62	62	0	0	0
NMRK2	27231	ucsc.edu	37	19	3942210	3942210	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	76	0	1	1	0	0	0
EEF2	1938	ucsc.edu	37	19	3980552	3980552	+	Missense_Mutation	SNP	G	G	T	rs150273974	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	103	0	1172	1172	0	0	0
PIAS4	51588	bcgsc.ca	37	19	4013245	4013245	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	94	7	137	0	18	18	0	0	0
PLIN4	729359	ucsc.edu;bcgsc.ca	37	19	4504542	4504542	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	13	6	44	0	1	0	1	0	0
SEMA6B	10501	ucsc.edu	37	19	4558058	4558058	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	13	4	31	0	0	0	0	0	0
DPP9	91039	ucsc.edu	37	19	4685731	4685731	+	Silent	SNP	C	C	A	rs193022999	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	48	0	44	44	0	0	0
PLIN3	10226	ucsc.edu	37	19	4844745	4844745	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	24	0	89	89	0	0	0
KDM4B	23030	ucsc.edu	37	19	5144814	5144814	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	109	0	36	36	0	0	0
LONP1	9361	bcgsc.ca	37	19	5705967	5705967	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	119	9	161	0	70	70	0	0	0
CATSPERD	257062	ucsc.edu;bcgsc.ca	37	19	5751707	5751707	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	8	51	0	0	0	0	0	0
DUS3L	56931	ucsc.edu	37	19	5789279	5789279	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	77	0	7	7	0	0	0
ACSBG2	81616	bcgsc.ca	37	19	6147519	6147519	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	156	9	180	0	0	0	0	0	0
PSPN	5623	ucsc.edu	37	19	6375851	6375851	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	63	1	3	3	0	0	0
SLC25A41	284427	ucsc.edu	37	19	6429774	6429774	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	66	0	0	0	0	0	0
DENND1C	79958	ucsc.edu	37	19	6468352	6468352	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	53	0	125	124	1	0	0
EMR4P	326342	bcgsc.ca	37	19	6990824	6990824	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	140	13	162	0	0	0	0	0	0
ZNF557	79230	ucsc.edu	37	19	7083156	7083156	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	80	0	4	4	0	0	0
PEX11G	92960	ucsc.edu	37	19	7546948	7546948	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	16	4	28	0	8	8	0	0	0
MCOLN1	57192	bcgsc.ca	37	19	7591368	7591368	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	142	9	304	0	8	8	0	0	0
STXBP2	6813	ucsc.edu	37	19	7704641	7704641	+	Missense_Mutation	SNP	G	G	T	rs141717050	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	6	58	0	87	87	0	0	0
CD209	30835	bcgsc.ca	37	19	7808085	7808085	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	377	17	426	1	0	0	0	0	0
LRRC8E	80131	ucsc.edu	37	19	7964535	7964535	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	6	86	0	14	14	0	0	0
FBN3	84467	ucsc.edu;bcgsc.ca	37	19	8203163	8203163	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	6	55	0	0	0	0	0	0
PRAM1	84106	bcgsc.ca	37	19	8555793	8555793	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	346	18	454	0	1	1	0	0	0
MUC16	94025	bcgsc.ca	37	19	8994484	8994484	+	Missense_Mutation	SNP	C	C	A	rs192252164	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	142	9	227	2	3	3	0	0	0
ZNF317	57693	bcgsc.ca	37	19	9267949	9267949	+	Silent	SNP	G	G	T	rs202207547	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	88	7	77	0	0	0	0	0	0
ZNF317	57693	ucsc.edu;bcgsc.ca	37	19	9271572	9271572	+	Silent	SNP	C	C	A	rs182231417	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	86	0	22	22	0	0	0
ZNF426	79088	bcgsc.ca	37	19	9639089	9639089	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	113	9	109	0	7	7	0	0	0
COL5A3	50509	bcgsc.ca	37	19	10091809	10091809	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	149	10	141	0	0	0	0	0	0
COL5A3	50509	bcgsc.ca	37	19	10106276	10106276	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	109	9	126	0	0	0	0	0	0
COL5A3	50509	bcgsc.ca	37	19	10108108	10108108	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	7	26	0	0	0	0	0	0
DNMT1	1786	bcgsc.ca	37	19	10291143	10291143	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	195	10	205	0	8	8	0	0	0
TYK2	7297	ucsc.edu	37	19	10468591	10468591	+	Missense_Mutation	SNP	C	C	A	rs148823525	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	81	0	1	1	0	0	0
S1PR5	53637	ucsc.edu	37	19	10624854	10624854	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	49	0	0	0	0	0	0
KRI1	65095	ucsc.edu	37	19	10670325	10670325	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	6	110	0	14	14	0	0	0
RAB3D	9545	bcgsc.ca	37	19	11447929	11447929	+	Silent	SNP	G	G	T	rs151261006	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	266	13	420	0	17	17	0	0	0
SWSAP1	126074	ucsc.edu	37	19	11486495	11486495	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	67	0	3	3	0	0	0
ZNF627	199692	ucsc.edu	37	19	11728339	11728339	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	86	0	25	25	0	0	0
ZNF625	90589	bcgsc.ca	37	19	12256708	12256708	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	126	9	165	0	5	5	0	0	0
ZNF799	90576	bcgsc.ca	37	19	12501921	12501921	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	171	11	169	0	6	6	0	0	0
ZNF791	163049	ucsc.edu	37	19	12735524	12735524	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	5	23	0	0	0	0	0	0
MAN2B1	4125	ucsc.edu	37	19	12767862	12767862	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	5	31	0	0	0	0	0	0
WDR83	84292	ucsc.edu	37	19	12786363	12786363	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	79	0	29	29	0	0	0
TNPO2	30000	ucsc.edu	37	19	12826467	12826467	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	39	0	46	46	0	0	0
BEST2	54831	ucsc.edu	37	19	12865754	12865754	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	53	0	0	0	0	0	0
MAST1	22983	bcgsc.ca	37	19	12984832	12984832	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	6	49	0	0	0	0	0	0
ZSWIM4	65249	ucsc.edu	37	19	13920033	13920033	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	56	1	1	1	0	0	0
IL27RA	9466	ucsc.edu	37	19	14160113	14160113	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	112	0	1	1	0	0	0
ZNF333	84449	ucsc.edu;bcgsc.ca	37	19	14829868	14829868	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	67	8	86	1	1	1	0	0	0
OR7A5	26659	ucsc.edu	37	19	14938214	14938214	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	70	6	110	0	0	0	0	0	0
SLC1A6	6511	ucsc.edu	37	19	15061198	15061198	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	82	0	0	0	0	0	0
HSH2D	84941	ucsc.edu	37	19	16268411	16268411	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	55	0	4	4	0	0	0
C19orf44	84167	bcgsc.ca	37	19	16611910	16611910	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	145	8	248	2	11	11	0	0	0
TMEM38A	79041	ucsc.edu	37	19	16799119	16799119	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	152	0	20	20	0	0	0
SIN3B	23309	ucsc.edu	37	19	16965047	16965047	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	79	0	11	11	0	0	0
SIN3B	23309	ucsc.edu	37	19	16980494	16980494	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	59	0	9	9	0	0	0
CPAMD8	27151	ucsc.edu	37	19	17039017	17039017	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	6	75	0	0	0	0	0	0
CPAMD8	27151	ucsc.edu	37	19	17104326	17104326	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	7	75	0	0	0	0	0	0
ANO8	57719	bcgsc.ca	37	19	17442152	17442152	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	68	6	111	0	18	18	0	0	0
FAM129C	199786	ucsc.edu	37	19	17657603	17657603	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	11	0	1	1	0	0	0
UNC13A	23025	ucsc.edu;bcgsc.ca	37	19	17728644	17728644	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	6	95	0	0	0	0	0	0
KCNN1	3780	bcgsc.ca	37	19	18100536	18100536	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	239	10	275	0	0	0	0	0	0
IL12RB1	3594	ucsc.edu	37	19	18182935	18182935	+	Silent	SNP	G	G	T	rs201734902	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	5	56	0	0	0	0	0	0
MAST3	23031	ucsc.edu;bcgsc.ca	37	19	18232505	18232505	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	71	7	174	0	0	0	0	0	0
PDE4C	5143	bcgsc.ca	37	19	18331048	18331048	+	Silent	SNP	G	G	T	rs201545624	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	234	11	347	0	0	0	0	0	0
LSM4	25804	ucsc.edu	37	19	18426870	18426870	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	55	0	0	0	0	0	0
NR2C2AP	126382	ucsc.edu	37	19	19312756	19312756	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	68	0	33	33	0	0	0
NR2C2AP	126382	ucsc.edu	37	19	19313832	19313832	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	91	0	1	1	0	0	0
NCAN	1463	ucsc.edu	37	19	19356135	19356135	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	78	0	0	0	0	0	0
GATAD2A	54815	ucsc.edu;bcgsc.ca	37	19	19609272	19609272	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	7	99	0	30	30	0	0	0
GATAD2A	54815	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	19613195	19613195	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	93	36	182	0	46	23	23	0	0
ATP13A1	57130	ucsc.edu	37	19	19762581	19762581	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	71	0	48	48	0	0	0
ZNF101	94039	ucsc.edu	37	19	19790996	19790996	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	53	0	1	1	0	0	0
LOC641367	0	ucsc.edu	37	19	21934578	21934578	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	48	0	10	10	0	0	0
ZNF43	7594	bcgsc.ca	37	19	21990580	21990580	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	77	8	81	0	3	3	0	0	0
DPY19L3	147991	bcgsc.ca	37	19	32930056	32930056	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	166	12	142	0	0	0	0	0	0
CEBPG	1054	ucsc.edu	37	19	33870384	33870384	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	41	0	27	27	0	0	0
KCTD15	79047	ucsc.edu	37	19	34291364	34291364	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	17	0	2	2	0	0	0
ZNF30	90075	broad.mit.edu	37	19	35435141	35435141	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	3	63	0	5	5	0	0	0
SCN1B	6324	ucsc.edu	37	19	35530554	35530554	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	58	0	83	83	0	0	0
RBM42	79171	ucsc.edu	37	19	36125172	36125172	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	126	0	68	68	0	0	0
ZBTB32	27033	ucsc.edu	37	19	36207188	36207188	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	49	0	0	0	0	0	0
ZBTB32	27033	ucsc.edu	37	19	36207199	36207199	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	46	0	0	0	0	0	0
MLL4	8085	ucsc.edu	37	19	36210842	36210842	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	117	1	16	16	0	0	0
MLL4	8085	ucsc.edu	37	19	36229255	36229255	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	44	0	28	28	0	0	0
MLL4	8085	ucsc.edu	37	19	36229351	36229351	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	55	0	36	36	0	0	0
NPHS1	4868	ucsc.edu	37	19	36340180	36340180	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	50	0	0	0	0	0	0
NFKBID	84807	bcgsc.ca	37	19	36386961	36386961	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	98	8	147	0	3	3	0	0	0
HCST	10870	bcgsc.ca	37	19	36394295	36394295	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	121	11	172	0	6	6	0	0	0
TYROBP	7305	ucsc.edu	37	19	36398632	36398632	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	6	52	1	1	1	0	0	0
POLR2I	5438	ucsc.edu	37	19	36605291	36605291	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	78	0	67	67	0	0	0
TBCB	1155	bcgsc.ca	37	19	36616577	36616577	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	295	20	457	2	1	1	0	0	0
ZNF529	57711	bcgsc.ca	37	19	37038292	37038292	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	272	17	274	0	1	1	0	0	0
ZNF345	25850	bcgsc.ca	37	19	37367883	37367883	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	145	9	103	1	1	1	0	0	0
ZNF527	84503	ucsc.edu;bcgsc.ca	37	19	37880274	37880274	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	95	9	83	0	0	0	0	0	0
ZNF793	390927	ucsc.edu	37	19	38028162	38028162	+	Missense_Mutation	SNP	C	C	A	rs200856065	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	38	0	3	3	0	0	0
SPINT2	10653	bcgsc.ca	37	19	38779782	38779782	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	170	10	181	0	0	0	0	0	0
SPINT2	10653	ucsc.edu	37	19	38781194	38781194	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	57	0	652	650	2	0	0
RYR1	6261	ucsc.edu	37	19	38966065	38966065	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	44	0	0	0	0	0	0
SIRT2	22933	ucsc.edu	37	19	39370110	39370110	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	16	4	22	0	42	42	0	0	0
FBXO17	115290	bcgsc.ca	37	19	39437177	39437177	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	103	8	125	0	59	59	0	0	0
PAK4	10298	ucsc.edu	37	19	39669173	39669173	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	69	0	61	61	0	0	0
ZFP36	7538	ucsc.edu	37	19	39899189	39899189	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	96	0	114	114	0	0	0
FCGBP	8857	bcgsc.ca	37	19	40398396	40398396	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	212	12	356	0	10	10	0	0	0
PRX	57716	ucsc.edu	37	19	40904546	40904546	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	53	0	4	4	0	0	0
SPTBN4	57731	bcgsc.ca	37	19	41029506	41029506	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	78	7	79	0	1	1	0	0	0
LTBP4	8425	ucsc.edu	37	19	41132992	41132992	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	49	0	37	37	0	0	0
CYP2F1	1572	bcgsc.ca	37	19	41622213	41622213	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	277	13	407	0	0	0	0	0	0
AXL	558	bcgsc.ca	37	19	41736934	41736934	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	138	10	216	0	129	129	0	0	0
CEACAM3	1084	bcgsc.ca	37	19	42301545	42301545	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	187	10	282	1	0	0	0	0	0
GRIK5	2901	ucsc.edu	37	19	42507830	42507830	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	68	0	0	0	0	0	0
GRIK5	2901	ucsc.edu	37	19	42510821	42510821	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	59	0	28	28	0	0	0
POU2F2	5452	ucsc.edu	37	19	42599484	42599484	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	46	0	0	0	0	0	0
GSK3A	2931	ucsc.edu	37	19	42736240	42736240	+	Silent	SNP	C	C	A	rs139229584	bycluster;by1000genomes;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	48	0	113	113	0	0	0
PSG1	5669	bcgsc.ca	37	19	43372328	43372328	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	333	13	392	2	0	0	0	0	0
PSG1	5669	bcgsc.ca	37	19	43382065	43382065	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	232	12	424	0	0	0	0	0	0
LYPD3	27076	ucsc.edu	37	19	43967866	43967866	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	5	72	0	3	3	0	0	0
PLAUR	5329	bcgsc.ca	37	19	44159600	44159600	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	142	11	198	0	0	0	0	0	0
ZNF155	7711	bcgsc.ca	37	19	44501504	44501504	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	173	9	153	0	3	3	0	0	0
MARK4	57787	ucsc.edu	37	19	45781205	45781205	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	99	0	13	13	0	0	0
MARK4	57787	ucsc.edu	37	19	45797668	45797668	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	87	0	34	34	0	0	0
ERCC2	2068	ucsc.edu	37	19	45868140	45868140	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	6	70	0	23	23	0	0	0
ZC3H4	23211	ucsc.edu	37	19	47569673	47569673	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	17	4	34	0	7	7	0	0	0
CCDC9	26093	ucsc.edu;bcgsc.ca	37	19	47763856	47763856	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	69	8	139	1	0	0	0	0	0
CCDC9	26093	ucsc.edu	37	19	47769900	47769900	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	8	3	17	0	13	9	4	0	0
C5AR2	27202	ucsc.edu	37	19	47844793	47844793	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	6	131	0	0	0	0	0	0
SLC8A2	6543	ucsc.edu	37	19	47969037	47969037	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	27	0	0	0	0	0	0
SEPW1	6415	bcgsc.ca	37	19	48284416	48284416	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	214	10	386	0	184	184	0	0	0
LMTK3	114783	ucsc.edu	37	19	49001577	49001577	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	76	0	14	14	0	0	0
RASIP1	54922	ucsc.edu	37	19	49243497	49243497	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	123	0	0	0	0	0	0
IZUMO1	284359	ucsc.edu	37	19	49246758	49246758	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	62	0	0	0	0	0	0
FGF21	26291	ucsc.edu	37	19	49259527	49259527	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	58	0	0	0	0	0	0
PLEKHA4	57664	ucsc.edu	37	19	49344549	49344549	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	38	0	33	33	0	0	0
PPP1R15A	23645	ucsc.edu	37	19	49377480	49377480	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	104	2	38	38	0	0	0
FTL	2512	ucsc.edu	37	19	49469568	49469568	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	99	0	1046	1045	0	1	0
GYS1	2997	ucsc.edu	37	19	49473077	49473077	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	5	102	0	29	29	0	0	0
PRR12	57479	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	50097991	50097991	+	Silent	SNP	G	G	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	15	72	0	43	25	18	0	0
RRAS	6237	ucsc.edu	37	19	50140314	50140314	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	49	0	1	1	0	0	0
PTOV1	53635	ucsc.edu	37	19	50360981	50360981	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	44	0	127	127	0	0	0
ATF5	22809	ucsc.edu	37	19	50434156	50434156	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	36	0	24	24	0	0	0
SIGLEC11	114132	ucsc.edu	37	19	50453460	50453460	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	5	27	0	0	0	0	0	0
ZNF473	25888	ucsc.edu	37	19	50549108	50549108	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	60	0	8	8	0	0	0
MYH14	79784	ucsc.edu	37	19	50812936	50812936	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	26	0	19	19	0	0	0
MYBPC2	4606	bcgsc.ca	37	19	50939936	50939936	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	101	8	172	0	0	0	0	0	0
ASPDH	554235	ucsc.edu	37	19	51015789	51015789	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	48	0	3	3	0	0	0
LRRC4B	94030	ucsc.edu;bcgsc.ca	37	19	51022488	51022488	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	72	7	116	0	3	3	0	0	0
KLK2	3817	ucsc.edu	37	19	51378017	51378017	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	106	1	0	0	0	0	0
CLDND2	125875	ucsc.edu	37	19	51870727	51870727	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	16	4	16	0	0	0	0	0	0
CEACAM18	729767	ucsc.edu	37	19	51983648	51983648	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	36	0	0	0	0	0	0
SIGLEC12	89858	ucsc.edu	37	19	52001513	52001513	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	59	1	0	0	0	0	0
ZNF175	7728	bcgsc.ca	37	19	52091361	52091361	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	199	11	227	0	7	7	0	0	0
ZNF611	81856	bcgsc.ca	37	19	53208453	53208453	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	296	16	364	1	24	24	0	0	0
ZNF347	84671	bcgsc.ca	37	19	53645330	53645330	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	193	11	159	0	3	3	0	0	0
BIRC8	112401	bcgsc.ca	37	19	53792953	53792953	+	Silent	SNP	C	C	A	rs200251966	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	309	16	240	1	0	0	0	0	0
ZNF845	91664	ucsc.edu;bcgsc.ca	37	19	53855549	53855549	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	7	114	0	2	2	0	0	0
LENG1	79165	ucsc.edu	37	19	54659624	54659624	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	50	0	4	4	0	0	0
KIR3DX1	90011	ucsc.edu	37	19	55045167	55045167	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	79	0	0	0	0	0	0
LILRB1	10859	ucsc.edu	37	19	55148035	55148035	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	6	90	0	3	3	0	0	0
LILRB4	11006	ucsc.edu	37	19	55176600	55176600	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	52	0	4	4	0	0	0
NLRP7	199713	ucsc.edu	37	19	55450395	55450395	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	75	7	79	0	0	0	0	0	0
PTPRH	5794	ucsc.edu	37	19	55697594	55697594	+	Missense_Mutation	SNP	C	C	A	rs202008932	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	100	1	0	0	0	0	0
PTPRH	5794	ucsc.edu	37	19	55708067	55708067	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	84	0	3	3	0	0	0
HSPBP1	23640	ucsc.edu	37	19	55785952	55785952	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	5	39	0	56	56	0	0	0
NLRP5	126206	bcgsc.ca	37	19	56545075	56545075	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	436	18	323	1	0	0	0	0	0
ZFP28	140612	bcgsc.ca	37	19	57059269	57059269	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	79	7	102	0	0	0	0	0	0
ZNF264	9422	bcgsc.ca	37	19	57724181	57724181	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	122	10	111	0	7	7	0	0	0
ZNF8	7554	bcgsc.ca	37	19	58797099	58797099	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	192	11	285	0	0	0	0	0	0
ZNF8	7554	ucsc.edu	37	19	58805532	58805532	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	84	0	2	2	0	0	0
ZNF8	7554	ucsc.edu	37	19	58806038	58806038	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	81	0	1	1	0	0	0
SLC27A5	10998	ucsc.edu	37	19	59022697	59022697	+	Missense_Mutation	SNP	C	C	A	rs148336155	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	64	0	0	0	0	0	0
FAM150B	285016	ucsc.edu	37	2	283133	283133	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	37	0	124	124	0	0	0
PXDN	7837	ucsc.edu	37	2	1684055	1684055	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	60	0	47	47	0	0	0
ADI1	55256	ucsc.edu	37	2	3504621	3504621	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	5	73	0	119	119	0	0	0
MBOAT2	129642	bcgsc.ca	37	2	9008613	9008613	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	226	12	177	0	20	20	0	0	0
NOL10	79954	ucsc.edu	37	2	10822185	10822185	+	Missense_Mutation	SNP	C	C	A	rs75743407	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	24	0	0	0	0	0	0
ROCK2	9475	bcgsc.ca	37	2	11332418	11332418	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	365	15	276	1	7	7	0	0	0
ROCK2	9475	bcgsc.ca	37	2	11375927	11375927	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	229	11	167	0	6	6	0	0	0
GREB1	9687	ucsc.edu	37	2	11750900	11750900	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	105	1	4	4	0	0	0
GEN1	348654	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	17955658	17955658	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	221	106	171	1	0	0	0	0	0
MATN3	4148	ucsc.edu	37	2	20205929	20205929	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	50	0	1	1	0	0	0
GDF7	151449	ucsc.edu	37	2	20870295	20870295	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	11	3	31	0	4	2	2	0	0
C2orf43	60526	bcgsc.ca	37	2	20990063	20990063	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	200	11	204	2	9	9	0	0	0
APOB	338	hgsc.bcm.edu;bcgsc.ca	37	2	21229324	21229324	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	135	12	166	0	0	0	0	0	0
APOB	338	bcgsc.ca	37	2	21230923	21230923	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	220	12	239	1	0	0	0	0	0
C2orf44	80304	bcgsc.ca	37	2	24255778	24255778	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	286	15	200	0	8	8	0	0	0
DNMT3A	1788	ucsc.edu	37	2	25468900	25468900	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	72	7	112	0	0	0	0	0	0
KIF3C	3797	ucsc.edu	37	2	26203976	26203976	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	83	0	2	2	0	0	0
HADHB	3032	ucsc.edu	37	2	26499994	26499994	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	95	9	72	0	97	97	0	0	0
GPR113	165082	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	26532908	26532908	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	124	56	139	1	0	0	0	0	0
TCF23	150921	ucsc.edu	37	2	27375632	27375632	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	73	7	146	0	0	0	0	0	0
SLC5A6	8884	ucsc.edu	37	2	27424246	27424246	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	72	0	21	21	0	0	0
CAD	790	ucsc.edu	37	2	27461500	27461500	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	134	1	0	0	0	0	0
DNAJC5G	285126	ucsc.edu	37	2	27501192	27501192	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	45	0	0	0	0	0	0
KRTCAP3	200634	ucsc.edu;bcgsc.ca	37	2	27666901	27666901	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	6	56	0	7	7	0	0	0
GCKR	2646	bcgsc.ca	37	2	27722273	27722273	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	315	17	384	0	0	0	0	0	0
GCKR	2646	ucsc.edu	37	2	27726402	27726402	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	44	0	0	0	0	0	0
GCKR	2646	bcgsc.ca	37	2	27745412	27745412	+	Missense_Mutation	SNP	G	G	T	rs200860838	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	168	11	191	0	0	0	0	0	0
LOC100505716	0	ucsc.edu	37	2	28531392	28531392	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	58	0	0	0	0	0	0
PLB1	151056	ucsc.edu	37	2	28764665	28764665	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	67	1	0	0	0	0	0
YPEL5	51646	bcgsc.ca	37	2	30381519	30381519	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	123	7	116	0	40	40	0	0	0
XDH	7498	ucsc.edu;bcgsc.ca	37	2	31605889	31605889	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	79	8	95	0	0	0	0	0	0
BIRC6	57448	ucsc.edu	37	2	32728137	32728137	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	29	0	21	21	0	0	0
BIRC6	57448	bcgsc.ca	37	2	32734959	32734959	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	264	13	277	0	15	15	0	0	0
CRIM1	51232	ucsc.edu	37	2	36775700	36775700	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	55	0	121	121	0	0	0
STRN	6801	bcgsc.ca	37	2	37129879	37129879	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	198	11	154	0	11	11	0	0	0
NDUFAF7	55471	bcgsc.ca	37	2	37463254	37463254	+	Missense_Mutation	SNP	C	C	A	rs151093411	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	379	18	254	0	14	14	0	0	0
HAAO	23498	ucsc.edu	37	2	42994647	42994647	+	Missense_Mutation	SNP	C	C	A	rs146242229	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	34	0	0	0	0	0	0
HAAO	23498	ucsc.edu	37	2	42996879	42996879	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	89	0	8	8	0	0	0
THADA	63892	ucsc.edu	37	2	43819493	43819493	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	37	0	6	6	0	0	0
MSH2	4436	ucsc.edu	37	2	47702163	47702163	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	6	48	0	0	0	0	0	0
FBXO11	80204	bcgsc.ca	37	2	48040441	48040441	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	203	14	149	0	18	18	0	0	0
STON1-GTF2A1L	286749	bcgsc.ca	37	2	48872227	48872227	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	132	9	91	0	0	0	0	0	0
NRXN1	9378	ucsc.edu	37	2	50149370	50149370	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	42	0	0	0	0	0	0
PSME4	23198	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	54147352	54147352	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	468	189	456	0	0	0	0	0	0
RTN4	57142	bcgsc.ca	37	2	55201874	55201874	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	138	12	95	0	327	327	0	0	0
RTN4	57142	bcgsc.ca	37	2	55254581	55254581	+	Silent	SNP	C	C	A	rs138402788	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	10	103	0	0	0	0	0	0
CCDC88A	55704	bcgsc.ca	37	2	55522974	55522974	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	149	10	108	0	3	3	0	0	0
CCDC88A	55704	ucsc.edu;bcgsc.ca	37	2	55582862	55582862	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	69	0	4	4	0	0	0
FANCL	55120	ucsc.edu	37	2	58468360	58468360	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	71	0	0	0	0	0	0
ACTR2	10097	bcgsc.ca	37	2	65480881	65480881	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	228	12	160	0	56	56	0	0	0
MEIS1	4211	ucsc.edu	37	2	66664915	66664915	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	71	0	0	0	0	0	0
PNO1	56902	bcgsc.ca	37	2	68385515	68385515	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	153	10	147	0	0	0	0	0	0
ARHGAP25	9938	ucsc.edu	37	2	69034472	69034472	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	79	0	1	1	0	0	0
GFPT1	2673	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	69553334	69553334	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	22	46	0	35	25	10	0	0
GFPT1	2673	bcgsc.ca	37	2	69569298	69569298	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	382	15	248	1	0	0	0	0	0
C2orf42	54980	ucsc.edu	37	2	70409086	70409086	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	57	0	8	8	0	0	0
TIA1	7072	bcgsc.ca	37	2	70444040	70444040	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	508	18	489	0	33	33	0	0	0
TIA1	7072	bcgsc.ca	37	2	70444051	70444051	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	475	23	463	0	42	42	0	0	0
MPHOSPH10	10199	bcgsc.ca	37	2	71375189	71375189	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	393	21	386	0	17	17	0	0	0
DYSF	8291	ucsc.edu	37	2	71740908	71740908	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	56	0	2	2	0	0	0
CYP26B1	56603	ucsc.edu	37	2	72359527	72359527	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	45	0	0	0	0	0	0
SMYD5	10322	ucsc.edu	37	2	73447316	73447316	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	48	0	0	0	0	0	0
DUSP11	8446	ucsc.edu	37	2	74005466	74005466	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	71	7	57	0	5	5	0	0	0
DGUOK	1716	bcgsc.ca	37	2	74177801	74177801	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	366	16	422	2	10	10	0	0	0
TET3	200424	ucsc.edu	37	2	74326595	74326595	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	64	0	5	5	0	0	0
SLC4A5	57835	ucsc.edu	37	2	74482999	74482999	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	73	0	4	4	0	0	0
DCTN1	1639	ucsc.edu	37	2	74594856	74594856	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	91	0	53	53	0	0	0
INO80B	83444	ucsc.edu	37	2	74685022	74685022	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	93	0	12	12	0	0	0
MOGS	7841	ucsc.edu	37	2	74688458	74688458	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	77	0	38	38	0	0	0
LBX2-AS1	151534	ucsc.edu	37	2	74729759	74729759	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	103	0	10	10	0	0	0
DOK1	1796	bcgsc.ca	37	2	74784039	74784039	+	Missense_Mutation	SNP	G	G	T	rs200035741	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	209	11	297	1	26	26	0	0	0
RETSAT	54884	bcgsc.ca	37	2	85581565	85581565	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	131	10	206	1	52	52	0	0	0
GNLY	10578	ucsc.edu	37	2	85922507	85922507	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	63	0	6	6	0	0	0
KDM3A	55818	bcgsc.ca	37	2	86693788	86693788	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	204	13	191	0	12	12	0	0	0
ANAPC1P1	100286979	ucsc.edu	37	2	87106631	87106631	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	4	48	0	0	0	0	0	0
PROM2	150696	ucsc.edu	37	2	95943114	95943114	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	76	1	0	0	0	0	0
ADRA2B	151	ucsc.edu	37	2	96780741	96780741	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	27	0	0	0	0	0	0
STARD7	56910	ucsc.edu	37	2	96860716	96860716	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	24	0	91	91	0	0	0
SNRNP200	23020	bcgsc.ca	37	2	96944035	96944035	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	118	9	126	0	194	193	1	0	0
SNRNP200	23020	bcgsc.ca	37	2	96970470	96970470	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	123	8	141	0	58	58	0	0	0
CNNM4	26504	bcgsc.ca	37	2	97427194	97427194	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	217	11	340	1	22	22	0	0	0
CNNM4	26504	ucsc.edu	37	2	97474357	97474357	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	110	0	33	32	0	1	0
ANKRD36B	57730	ucsc.edu	37	2	98173406	98173406	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	5	18	0	0	0	0	0	0
ZAP70	7535	ucsc.edu	37	2	98349380	98349380	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	7	112	0	0	0	0	0	0
TMEM131	23505	ucsc.edu	37	2	98378574	98378574	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	6	55	0	37	36	0	0	1
TMEM131	23505	ucsc.edu	37	2	98392351	98392351	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	82	0	26	26	0	0	0
TMEM131	23505	ucsc.edu	37	2	98408873	98408873	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	44	0	33	33	0	0	0
IL1R2	7850	ucsc.edu	37	2	102636146	102636146	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	39	0	1	1	0	0	0
GPR45	11250	bcgsc.ca	37	2	105859428	105859428	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	105	9	128	0	0	0	0	0	0
ACOXL	55289	ucsc.edu	37	2	111691100	111691100	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	70	7	96	0	0	0	0	0	0
ACOXL	55289	ucsc.edu	37	2	111691168	111691168	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	70	0	0	0	0	0	0
MERTK	10461	bcgsc.ca	37	2	112767558	112767558	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	184	10	175	2	10	10	0	0	0
MERTK	10461	ucsc.edu;bcgsc.ca	37	2	112779158	112779158	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	9	95	0	0	0	0	0	0
CKAP2L	150468	bcgsc.ca	37	2	113498459	113498459	+	Silent	SNP	G	G	T	rs146748331	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	364	18	448	0	0	0	0	0	0
ACTR3	10096	bcgsc.ca	37	2	114691915	114691915	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	526	18	449	1	86	86	0	0	0
C1QL2	165257	ucsc.edu	37	2	119915218	119915218	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	6	77	0	0	0	0	0	0
STEAP3	55240	ucsc.edu	37	2	120003279	120003279	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	84	0	1	1	0	0	0
CNTNAP5	129684	bcgsc.ca	37	2	125521621	125521621	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	159	10	166	0	21	21	0	0	0
MAP3K2	10746	hgsc.bcm.edu;bcgsc.ca	37	2	128066229	128066229	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	378	19	480	2	12	12	0	0	0
MAP3K2	10746	ucsc.edu	37	2	128081818	128081818	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	18	4	13	0	0	0	0	0	0
IWS1	55677	bcgsc.ca	37	2	128263014	128263014	+	Silent	SNP	G	G	T	rs139177686	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	143	9	184	0	24	24	0	0	0
WDR33	55339	ucsc.edu	37	2	128477666	128477666	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	105	0	8	8	0	0	0
UGGT1	56886	bcgsc.ca	37	2	128886632	128886632	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	172	10	161	0	14	14	0	0	0
UGGT1	56886	bcgsc.ca	37	2	128913110	128913110	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	154	10	105	0	14	14	0	0	0
SMPD4	55627	ucsc.edu	37	2	130910899	130910899	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	103	0	0	0	0	0	0
AMER3	205147	ucsc.edu	37	2	131522223	131522223	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	37	0	0	0	0	0	0
GPR39	2863	ucsc.edu;bcgsc.ca	37	2	133402776	133402776	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	69	7	121	1	14	14	0	0	0
NCKAP5	344148	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	133541732	133541732	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	85	52	174	0	0	0	0	0	0
MIR128-1	406915	bcgsc.ca	37	2	136422982	136422982	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	185	12	110	0	0	0	0	0	0
LYPD6B	130576	bcgsc.ca	37	2	150069636	150069636	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	236	13	166	1	0	0	0	0	0
RIF1	55183	ucsc.edu	37	2	152321241	152321241	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	58	1	15	15	0	0	0
NEB	4703	ucsc.edu	37	2	152566187	152566187	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	5	15	0	0	0	0	0	0
STAM2	10254	bcgsc.ca	37	2	153004579	153004579	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	226	13	131	0	12	12	0	0	0
PRPF40A	55660	bcgsc.ca	37	2	153532984	153532984	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	6	29	0	26	26	0	0	0
RPRM	56475	ucsc.edu	37	2	154334819	154334819	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	52	0	0	0	0	0	0
GALNT5	11227	bcgsc.ca	37	2	158116047	158116047	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	169	12	173	0	0	0	0	0	0
TANC1	85461	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	160084382	160084382	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	83	41	89	1	24	20	4	0	0
BAZ2B	29994	bcgsc.ca	37	2	160289547	160289547	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	163	13	244	1	16	16	0	0	0
PLA2R1	22925	bcgsc.ca	37	2	160898680	160898680	+	Missense_Mutation	SNP	C	C	A	rs147708294	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	78	7	121	0	4	4	0	0	0
SCN3A	6328	ucsc.edu	37	2	165946777	165946777	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	34	0	0	0	0	0	0
SCN3A	6328	bcgsc.ca	37	2	166003531	166003531	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	142	9	151	0	0	0	0	0	0
SCN2A	6326	ucsc.edu	37	2	166152501	166152501	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	5	58	0	0	0	0	0	0
SCN1A	6323	ucsc.edu	37	2	166850725	166850725	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	47	0	0	0	0	0	0
SCN7A	6332	ucsc.edu	37	2	167273493	167273493	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	16	4	16	0	0	0	0	0	0
XIRP2	129446	bcgsc.ca	37	2	168101665	168101665	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	121	9	79	0	0	0	0	0	0
XIRP2	129446	bcgsc.ca	37	2	168107851	168107851	+	Silent	SNP	C	C	A	rs74648672		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	154	8	165	1	0	0	0	0	0
ABCB11	8647	bcgsc.ca	37	2	169781267	169781267	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	160	12	146	2	0	0	0	0	0
LRP2	4036	bcgsc.ca	37	2	170094637	170094637	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	86	8	58	0	56	56	0	0	0
MYO3B	140469	ucsc.edu	37	2	171400478	171400478	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	53	0	0	0	0	0	0
GAD1	2571	bcgsc.ca	37	2	171686090	171686090	+	Missense_Mutation	SNP	G	G	T	rs200092679	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	150	9	178	0	0	0	0	0	0
CYBRD1	79901	ucsc.edu	37	2	172411331	172411331	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	6	42	0	7	7	0	0	0
ITGA6	3655	bcgsc.ca	37	2	173344448	173344448	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	197	13	279	0	43	43	0	0	0
ZAK	0	bcgsc.ca	37	2	174097151	174097151	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	383	17	442	3	6	6	0	0	0
WIPF1	7456	ucsc.edu	37	2	175432715	175432715	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	69	0	25	25	0	0	0
NFE2L2	4780	ucsc.edu	37	2	178097266	178097266	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	39	0	95	93	0	1	1
AGPS	8540	bcgsc.ca	37	2	178301520	178301520	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	165	11	105	0	34	34	0	0	0
PDE11A	50940	bcgsc.ca	37	2	178705094	178705094	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	120	9	91	0	2	2	0	0	0
RBM45	129831	bcgsc.ca	37	2	178981007	178981007	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	158	9	125	1	9	9	0	0	0
TTN	7273	bcgsc.ca	37	2	179400415	179400415	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	271	14	218	1	0	0	0	0	0
TTN	7273	bcgsc.ca	37	2	179412855	179412855	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	442	18	427	0	0	0	0	0	0
TTN	7273	ucsc.edu	37	2	179415694	179415694	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	6	53	1	0	0	0	0	0
TTN	7273	bcgsc.ca	37	2	179442852	179442852	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	181	10	168	0	0	0	0	0	0
TTN	7273	bcgsc.ca	37	2	179444378	179444378	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	165	10	208	0	0	0	0	0	0
TTN	7273	ucsc.edu	37	2	179448346	179448346	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	35	0	0	0	0	0	0
TTN	7273	ucsc.edu	37	2	179477207	179477207	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	62	0	2	2	0	0	0
TTN	7273	bcgsc.ca	37	2	179500756	179500756	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	185	10	166	1	1	1	0	0	0
TTN	7273	ucsc.edu	37	2	179510741	179510741	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	23	0	1	1	0	0	0
TTN	7273	bcgsc.ca	37	2	179613172	179613172	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	224	12	172	0	0	0	0	0	0
TTN	7273	bcgsc.ca	37	2	179616730	179616730	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	311	15	286	0	0	0	0	0	0
NCKAP1	10787	bcgsc.ca	37	2	183821233	183821233	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	185	11	127	0	133	133	0	0	0
FSIP2	401024	ucsc.edu	37	2	186673773	186673773	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	7	46	1	0	0	0	0	0
COL3A1	1281	ucsc.edu	37	2	189864604	189864604	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	24	0	5	5	0	0	0
COL5A2	1290	ucsc.edu;bcgsc.ca	37	2	189904254	189904254	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	6	60	0	4	4	0	0	0
COL5A2	1290	bcgsc.ca	37	2	189932978	189932978	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	210	11	215	0	0	0	0	0	0
WDR75	84128	bcgsc.ca	37	2	190327291	190327291	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	223	12	176	0	3	3	0	0	0
STAT1	6772	ucsc.edu;bcgsc.ca	37	2	191864365	191864365	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	80	8	56	0	0	0	0	0	0
DNAH7	56171	bcgsc.ca	37	2	196659102	196659102	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	187	9	166	0	6	6	0	0	0
STK17B	9262	ucsc.edu	37	2	197005973	197005973	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	6	25	0	0	0	0	0	0
CCDC150	284992	ucsc.edu	37	2	197530295	197530295	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	18	0	0	0	0	0	0
CCDC150	284992	bcgsc.ca	37	2	197594027	197594027	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	150	10	91	0	2	2	0	0	0
HSPD1	3329	ucsc.edu	37	2	198363559	198363559	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	71	0	162	162	0	0	0
HSPE1-MOB4	0	bcgsc.ca	37	2	198404834	198404834	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	157	10	55	0	0	0	0	0	0
SPATS2L	26010	ucsc.edu	37	2	201337659	201337659	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	73	7	112	2	68	68	0	0	0
CLK1	1195	bcgsc.ca	37	2	201722708	201722708	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	159	11	173	0	0	0	0	0	0
ALS2	57679	bcgsc.ca	37	2	202593787	202593787	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	274	13	264	1	0	0	0	0	0
RAPH1	65059	ucsc.edu	37	2	204304744	204304744	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	76	0	3	3	0	0	0
RAPH1	65059	bcgsc.ca	37	2	204304943	204304943	+	Silent	SNP	G	G	T	rs139509322	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	8	235	1	3	3	0	0	0
MDH1B	130752	ucsc.edu	37	2	207620007	207620007	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	88	0	1	1	0	0	0
FZD5	7855	ucsc.edu	37	2	208633268	208633268	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	61	1	19	19	0	0	0
PIKFYVE	200576	bcgsc.ca	37	2	209169616	209169616	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	202	12	172	0	5	5	0	0	0
MAP2	4133	ucsc.edu;bcgsc.ca	37	2	210557728	210557728	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	89	9	98	0	0	0	0	0	0
ERBB4	2066	bcgsc.ca	37	2	212989615	212989615	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	115	9	113	0	0	0	0	0	0
IKZF2	22807	ucsc.edu	37	2	213914595	213914595	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	50	0	0	0	0	0	0
SPAG16	79582	bcgsc.ca	37	2	215274986	215274986	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	171	11	166	1	0	0	0	0	0
ABCA12	26154	bcgsc.ca	37	2	215812169	215812169	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	243	14	148	0	6	6	0	0	0
FN1	2335	ucsc.edu	37	2	216271175	216271175	+	Silent	SNP	G	G	T	rs140711133	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	45	0	18	18	0	0	0
TMEM169	92691	ucsc.edu;bcgsc.ca	37	2	216960884	216960884	+	Silent	SNP	C	C	A	rs148746587	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	72	8	91	0	14	14	0	0	0
SMARCAL1	50485	ucsc.edu	37	2	217341886	217341886	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	5	14	0	23	23	0	0	0
TNS1	7145	ucsc.edu;bcgsc.ca	37	2	218683150	218683150	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	69	7	137	0	21	21	0	0	0
VIL1	7429	ucsc.edu	37	2	219293043	219293043	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	85	1	2	2	0	0	0
ZNF142	7701	ucsc.edu	37	2	219507120	219507120	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	96	0	12	12	0	0	0
STK36	27148	ucsc.edu	37	2	219545364	219545364	+	Missense_Mutation	SNP	C	C	A	rs182802543		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	57	0	24	24	0	0	0
TTLL4	9654	bcgsc.ca	37	2	219603592	219603592	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	77	7	136	1	0	0	0	0	0
CYP27A1	1593	ucsc.edu	37	2	219679711	219679711	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	6	117	0	81	81	0	0	0
CCDC108	255101	ucsc.edu	37	2	219878724	219878724	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	5	57	0	0	0	0	0	0
CCDC108	255101	ucsc.edu;bcgsc.ca	37	2	219903755	219903755	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	67	7	75	0	1	1	0	0	0
ATG9A	79065	ucsc.edu	37	2	220086775	220086775	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	72	0	0	0	0	0	0
ATG9A	79065	bcgsc.ca	37	2	220087390	220087390	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	188	12	327	0	87	87	0	0	0
TUBA4A	7277	ucsc.edu;bcgsc.ca	37	2	220115954	220115954	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	107	0	15	15	0	0	0
TUBA4B	80086	ucsc.edu	37	2	220136554	220136554	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	77	1	0	0	0	0	0
SPEG	10290	ucsc.edu	37	2	220334036	220334036	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	64	0	0	0	0	0	0
SPEG	10290	ucsc.edu	37	2	220343908	220343908	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	43	0	1	1	0	0	0
SPEG	10290	ucsc.edu	37	2	220349125	220349125	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	6	44	0	1	1	0	0	0
SPEG	10290	ucsc.edu	37	2	220355314	220355314	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	108	0	1	1	0	0	0
ASIC4	55515	ucsc.edu	37	2	220397076	220397076	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	95	0	0	0	0	0	0
OBSL1	23363	bcgsc.ca	37	2	220430134	220430134	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	91	7	137	0	225	225	0	0	0
OBSL1	23363	ucsc.edu	37	2	220431675	220431675	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	89	1	102	102	0	0	0
STK11IP	114790	ucsc.edu	37	2	220472932	220472932	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	6	99	0	12	12	0	0	0
FAM124B	79843	ucsc.edu	37	2	225265907	225265907	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	79	0	0	0	0	0	0
DOCK10	55619	bcgsc.ca	37	2	225688249	225688249	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	88	8	74	0	1	1	0	0	0
COL4A4	1286	bcgsc.ca	37	2	227967565	227967565	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	207	13	196	0	0	0	0	0	0
SPHKAP	80309	ucsc.edu;bcgsc.ca	37	2	228881506	228881506	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	74	8	109	0	0	0	0	0	0
SPHKAP	80309	bcgsc.ca	37	2	228886427	228886427	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	94	8	90	0	0	0	0	0	0
DNER	92737	bcgsc.ca	37	2	230271957	230271957	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	206	11	253	0	0	0	0	0	0
TRIP12	9320	bcgsc.ca	37	2	230654397	230654397	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	223	11	162	0	22	22	0	0	0
SP140L	93349	ucsc.edu	37	2	231253299	231253299	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	7	33	0	9	9	0	0	0
ITM2C	81618	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	231741583	231741583	+	Silent	SNP	G	G	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	107	50	169	0	1	0	1	0	0
ALPI	248	ucsc.edu	37	2	233321670	233321670	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	46	0	0	0	0	0	0
ALPI	248	ucsc.edu	37	2	233323081	233323081	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	50	0	0	0	0	0	0
ECEL1	9427	ucsc.edu	37	2	233348874	233348874	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	92	0	1	1	0	0	0
DGKD	8527	ucsc.edu	37	2	234368894	234368894	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	5	116	0	5	5	0	0	0
USP40	55230	ucsc.edu	37	2	234396951	234396951	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	13	0	0	0	0	0	0
UGT1A3	54659	bcgsc.ca	37	2	234638544	234638544	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	326	15	383	0	0	0	0	0	0
TRPM8	79054	hgsc.bcm.edu	37	2	234858709	234858709	+	Silent	SNP	C	C	A	rs200656648	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	69	7	76	0	0	0	0	0	0
COL6A3	1293	ucsc.edu	37	2	238275796	238275796	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	40	0	0	0	0	0	0
TRAF3IP1	26146	ucsc.edu;bcgsc.ca	37	2	239253198	239253198	+	Missense_Mutation	SNP	G	G	T	rs141000731	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	86	9	61	0	0	0	0	0	0
HDAC4	9759	bcgsc.ca	37	2	239988451	239988451	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	91	7	214	1	5	5	0	0	0
HDAC4	9759	ucsc.edu	37	2	239988487	239988487	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	125	0	13	13	0	0	0
CSNK2A1	1457	bcgsc.ca	37	20	476423	476423	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	215	12	110	0	123	123	0	0	0
NSFL1C	55968	hgsc.bcm.edu;bcgsc.ca	37	20	1433207	1433207	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	345	19	285	2	105	105	0	0	0
SIRPG	55423	bcgsc.ca	37	20	1629796	1629796	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	287	16	242	0	0	0	0	0	0
TMC2	117532	ucsc.edu	37	20	2539391	2539391	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	21	0	0	0	0	0	0
PCED1A	64773	bcgsc.ca	37	20	2819363	2819363	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	220	10	302	0	75	75	0	0	0
VPS16	64601	bcgsc.ca	37	20	2843726	2843726	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	152	11	126	0	18	18	0	0	0
UBOX5	22888	ucsc.edu	37	20	3102331	3102331	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	45	0	12	12	0	0	0
DDRGK1	65992	ucsc.edu	37	20	3183913	3183913	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	47	0	93	93	0	0	0
ATRN	8455	bcgsc.ca	37	20	3553500	3553500	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	191	12	110	1	62	62	0	0	0
ATRN	8455	bcgsc.ca	37	20	3557535	3557535	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	168	11	153	0	31	31	0	0	0
CDS2	8760	bcgsc.ca	37	20	5155843	5155843	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	247	14	160	0	57	57	0	0	0
CDS2	8760	bcgsc.ca	37	20	5159572	5159572	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	231	11	130	0	44	44	0	0	0
GPCPD1	56261	bcgsc.ca	37	20	5579430	5579430	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	99	9	49	0	15	15	0	0	0
FERMT1	55612	ucsc.edu	37	20	6064802	6064802	+	Silent	SNP	G	G	T	rs143876620	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	28	0	0	0	0	0	0
PLCB4	5332	bcgsc.ca	37	20	9453992	9453992	+	Missense_Mutation	SNP	C	C	A	rs6140947	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	209	12	80	0	204	204	0	0	0
SPTLC3	55304	bcgsc.ca	37	20	13107302	13107302	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	293	11	253	0	35	35	0	0	0
NDUFAF5	79133	bcgsc.ca	37	20	13782205	13782205	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	91	7	51	0	26	26	0	0	0
RRBP1	6238	ucsc.edu	37	20	17602103	17602103	+	Silent	SNP	C	C	A	rs7344647	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	40	0	0	0	0	0	0
BANF2	140836	bcgsc.ca	37	20	17716324	17716324	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	209	13	151	0	1	1	0	0	0
DZANK1	55184	bcgsc.ca	37	20	18395005	18395005	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	67	6	73	0	0	0	0	0	0
C20orf26	26074	bcgsc.ca	37	20	20056175	20056175	+	Missense_Mutation	SNP	C	C	A	rs201096460	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	292	12	166	1	0	0	0	0	0
THBD	7056	ucsc.edu	37	20	23029132	23029132	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	74	0	35	35	0	0	0
COX4I2	84701	bcgsc.ca	37	20	30231330	30231330	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	101	8	80	0	0	0	0	0	0
TTLL9	164395	ucsc.edu	37	20	30525287	30525287	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	59	0	1	1	0	0	0
CDK5RAP1	51654	bcgsc.ca	37	20	31979974	31979974	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	295	13	160	1	14	14	0	0	0
RALY	22913	ucsc.edu	37	20	32665022	32665022	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	63	0	175	175	0	0	0
NCOA6	23054	bcgsc.ca	37	20	33328475	33328475	+	Missense_Mutation	SNP	G	G	T	rs143303907	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	205	10	148	0	56	56	0	0	0
NCOA6	23054	bcgsc.ca	37	20	33342583	33342583	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	145	10	94	0	32	32	0	0	0
EDEM2	55741	ucsc.edu	37	20	33735022	33735022	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	34	0	29	29	0	0	0
PHF20	51230	bcgsc.ca	37	20	34515729	34515729	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	365	16	232	0	19	19	0	0	0
DLGAP4	22839	ucsc.edu	37	20	35064590	35064590	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	32	0	0	0	0	0	0
DSN1	79980	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	35399580	35399580	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	314	100	231	1	11	6	5	0	0
SOGA1	140710	bcgsc.ca	37	20	35443639	35443639	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	169	9	195	0	14	14	0	0	0
RBL1	5933	bcgsc.ca	37	20	35693827	35693827	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	399	17	174	0	0	0	0	0	0
MROH8	140699	bcgsc.ca	37	20	35748190	35748190	+	Missense_Mutation	SNP	G	G	T	rs201918707	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	203	13	173	0	0	0	0	0	0
MROH8	140699	bcgsc.ca	37	20	35783530	35783530	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	277	14	191	0	1	1	0	0	0
SRC	6714	ucsc.edu	37	20	36031631	36031631	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	17	4	15	0	63	63	0	0	0
KIAA1755	85449	ucsc.edu;bcgsc.ca	37	20	36841632	36841632	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	65	0	0	0	0	0	0
KIAA1755	85449	ucsc.edu	37	20	36841710	36841710	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	39	0	0	0	0	0	0
KIAA1755	85449	ucsc.edu	37	20	36841970	36841970	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	53	0	1	1	0	0	0
SNORA60	677837	bcgsc.ca	37	20	37078035	37078035	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	456	21	456	0	0	0	0	0	0
MAFB	9935	ucsc.edu	37	20	39316755	39316755	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	53	0	7	7	0	0	0
EMILIN3	90187	ucsc.edu	37	20	39993746	39993746	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	74	2	0	0	0	0	0
CHD6	84181	bcgsc.ca	37	20	40065925	40065925	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	204	12	105	0	0	0	0	0	0
PTPRT	11122	bcgsc.ca	37	20	40743923	40743923	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	188	11	128	0	0	0	0	0	0
WFDC8	90199	bcgsc.ca	37	20	44187623	44187623	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	296	18	187	0	0	0	0	0	0
ZSWIM1	90204	bcgsc.ca	37	20	44511478	44511478	+	Silent	SNP	C	C	A	rs142814067	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	101	8	93	1	13	13	0	0	0
PCIF1	63935	bcgsc.ca	37	20	44569823	44569823	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	115	10	91	1	72	72	0	0	0
SLC12A5	57468	bcgsc.ca	37	20	44670100	44670100	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	149	12	137	0	0	0	0	0	0
SLC12A5	57468	ucsc.edu	37	20	44681622	44681622	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	49	0	0	0	0	0	0
ELMO2	63916	bcgsc.ca	37	20	45022174	45022174	+	Silent	SNP	G	G	T	rs139415068	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	554	23	429	0	1	1	0	0	0
ZNF334	55713	bcgsc.ca	37	20	45133254	45133254	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	144	10	97	1	0	0	0	0	0
EYA2	2139	ucsc.edu	37	20	45700877	45700877	+	Missense_Mutation	SNP	G	G	T	rs149600847	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	37	0	3	3	0	0	0
NCOA3	8202	bcgsc.ca	37	20	46270976	46270976	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	243	13	117	0	10	10	0	0	0
NCOA3	8202	bcgsc.ca	37	20	46279991	46279991	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	125	8	94	0	15	15	0	0	0
CSE1L	1434	bcgsc.ca	37	20	47706186	47706186	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	213	11	117	0	34	34	0	0	0
B4GALT5	9334	bcgsc.ca	37	20	48273194	48273194	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	215	11	152	1	100	100	0	0	0
SLC9A8	23315	bcgsc.ca	37	20	48471991	48471991	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	434	18	281	1	8	8	0	0	0
ATP9A	10079	ucsc.edu	37	20	50234092	50234092	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	22	0	0	0	0	0	0
ZNF217	7764	bcgsc.ca	37	20	52198379	52198379	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	223	10	162	0	14	14	0	0	0
FAM209A	200232	bcgsc.ca	37	20	55100033	55100033	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	145	11	132	0	0	0	0	0	0
FAM209B	388799	bcgsc.ca	37	20	55108603	55108603	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	172	10	199	0	0	0	0	0	0
RBM38	55544	ucsc.edu	37	20	55982812	55982812	+	Silent	SNP	C	C	A	rs143107197	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	35	0	14	14	0	0	0
MIR298	100126296	ucsc.edu	37	20	57393289	57393289	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	29	0	0	0	0	0	0
LAMA5	3911	ucsc.edu	37	20	60887342	60887342	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	39	0	95	95	0	0	0
MIR133A2	406923	ucsc.edu	37	20	61162119	61162119	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	30	0	0	0	0	0	0
GMEB2	26205	ucsc.edu	37	20	62221442	62221442	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	58	0	17	17	0	0	0
GMEB2	26205	ucsc.edu	37	20	62221480	62221480	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	68	0	10	10	0	0	0
MYT1	4661	ucsc.edu	37	20	62837095	62837095	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	55	0	0	0	0	0	0
LIPI	149998	bcgsc.ca	37	21	15481327	15481327	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	428	18	284	0	0	0	0	0	0
JAM2	58494	ucsc.edu	37	21	27070995	27070995	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	32	0	0	0	0	0	0
CCT8	10694	bcgsc.ca	37	21	30432925	30432925	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	144	10	108	0	134	134	0	0	0
TIAM1	7074	ucsc.edu	37	21	32554798	32554798	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	51	0	1	1	0	0	0
HUNK	30811	ucsc.edu	37	21	33368176	33368176	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	55	6	66	0	10	10	0	0	0
SYNJ1	8867	ucsc.edu	37	21	34014256	34014256	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	36	0	5	5	0	0	0
SYNJ1	8867	ucsc.edu	37	21	34060648	34060648	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	21	0	2	2	0	0	0
ITSN1	6453	ucsc.edu	37	21	35247661	35247661	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	99	0	0	0	0	0	0
CBR1	873	bcgsc.ca	37	21	37444801	37444801	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	129	10	131	1	173	173	0	0	0
CLDN14	23562	ucsc.edu	37	21	37833865	37833865	+	Silent	SNP	G	G	T	rs150731625	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	25	0	3	3	0	0	0
SIM2	6493	ucsc.edu	37	21	38114022	38114022	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	41	0	0	0	0	0	0
KCNJ6	3763	bcgsc.ca	37	21	39087226	39087226	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	160	13	181	0	0	0	0	0	0
BRWD1	54014	bcgsc.ca	37	21	40648099	40648099	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	140	9	113	0	0	0	0	0	0
WRB	7485	bcgsc.ca	37	21	40768855	40768855	+	Missense_Mutation	SNP	C	C	A	rs199876754	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	9	145	1	69	69	0	0	0
DSCAM	1826	ucsc.edu	37	21	41446985	41446985	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	72	0	0	0	0	0	0
FAM3B	54097	bcgsc.ca	37	21	42729109	42729109	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	165	10	140	0	1	1	0	0	0
UMODL1	89766	bcgsc.ca	37	21	43547923	43547923	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	104	9	122	0	0	0	0	0	0
ABCG1	9619	bcgsc.ca	37	21	43716367	43716367	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	109	8	108	1	30	30	0	0	0
SLC37A1	54020	ucsc.edu	37	21	43979152	43979152	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	69	0	8	8	0	0	0
RRP1B	23076	ucsc.edu	37	21	45107796	45107796	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	107	0	5	5	0	0	0
TRAPPC10	7109	ucsc.edu	37	21	45499930	45499930	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	6	74	0	21	21	0	0	0
PWP2	5822	ucsc.edu	37	21	45534149	45534149	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	6	110	0	0	0	0	0	0
AIRE	326	ucsc.edu	37	21	45717568	45717568	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	98	0	0	0	0	0	0
TRPM2	7226	ucsc.edu	37	21	45786795	45786795	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	54	0	1	1	0	0	0
TRPM2	7226	ucsc.edu	37	21	45861595	45861595	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	71	0	0	0	0	0	0
ITGB2	3689	ucsc.edu	37	21	46308770	46308770	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	64	0	57	57	0	0	0
POFUT2	23275	bcgsc.ca	37	21	46698062	46698062	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	290	12	331	0	25	25	0	0	0
LSS	4047	ucsc.edu;bcgsc.ca	37	21	47616133	47616133	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	71	7	90	0	8	8	0	0	0
PCNT	5116	ucsc.edu	37	21	47836624	47836624	+	Silent	SNP	G	G	T	rs145376230	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	79	0	4	4	0	0	0
TSSK2	23617	ucsc.edu	37	22	19119014	19119014	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	47	0	2	2	0	0	0
CLTCL1	8218	ucsc.edu	37	22	19263146	19263146	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	21	0	0	0	0	0	0
TXNRD2	10587	ucsc.edu	37	22	19864709	19864709	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	49	0	21	21	0	0	0
ARVCF	421	ucsc.edu	37	22	19964966	19964966	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	151	0	13	13	0	0	0
DGCR8	54487	ucsc.edu	37	22	20094162	20094162	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	98	0	13	13	0	0	0
RANBP1	5902	ucsc.edu	37	22	20114554	20114554	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	98	0	27	27	0	0	0
PPIL2	23759	ucsc.edu	37	22	22048925	22048925	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	5	122	0	25	25	0	0	0
VPREB1	7441	ucsc.edu	37	22	22599601	22599601	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	78	0	0	0	0	0	0
LOC96610	0	broad.mit.edu	37	22	22661206	22661206	+	RNA	SNP	T	T	C	rs4044083		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	3	63	0	13	13	0	0	0
LOC96610	0	ucsc.edu	37	22	22661591	22661591	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	6	90	1	28	28	0	0	0
POM121L1P	25812	ucsc.edu	37	22	22975974	22975974	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	68	0	0	0	0	0	0
IGLL5	100423062	ucsc.edu	37	22	23237841	23237841	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	131	0	24	24	0	0	0
BCR	613	ucsc.edu	37	22	23523943	23523943	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	114	0	23	23	0	0	0
FBXW4P1	26226	ucsc.edu	37	22	23605737	23605737	+	RNA	SNP	C	C	A	rs191143200	by1000genomes;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	129	0	109	109	0	0	0
C22orf43	51233	bcgsc.ca	37	22	23962795	23962795	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	93	9	144	0	0	0	0	0	0
ZNF70	7621	ucsc.edu	37	22	24086418	24086418	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	98	0	3	3	0	0	0
VPREB3	29802	ucsc.edu	37	22	24095133	24095133	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	99	0	0	0	0	0	0
DERL3	91319	ucsc.edu	37	22	24177046	24177046	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	5	94	0	0	0	0	0	0
CABIN1	23523	ucsc.edu	37	22	24472174	24472174	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	6	137	0	17	17	0	0	0
SPECC1L	23384	bcgsc.ca	37	22	24717411	24717411	+	Missense_Mutation	SNP	C	C	A	rs148203655	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	79	7	148	0	8	8	0	0	0
UPB1	51733	ucsc.edu	37	22	24916397	24916397	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	18	4	39	0	0	0	0	0	0
IGLL3P	91353	ucsc.edu	37	22	25716029	25716029	+	RNA	SNP	G	G	T	rs117836284	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	102	1	0	0	0	0	0
MYO18B	84700	ucsc.edu	37	22	26228924	26228924	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	6	132	0	0	0	0	0	0
ASPHD2	57168	ucsc.edu	37	22	26829742	26829742	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	135	0	0	0	0	0	0
TFIP11	24144	ucsc.edu;bcgsc.ca	37	22	26892847	26892847	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	7	148	0	1	1	0	0	0
CHEK2	11200	ucsc.edu	37	22	29085138	29085138	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	77	0	3	3	0	0	0
CHEK2	11200	bcgsc.ca	37	22	29095890	29095890	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	199	13	411	1	10	10	0	0	0
CHEK2	11200	ucsc.edu	37	22	29130467	29130467	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	97	0	4	4	0	0	0
C22orf31	25770	ucsc.edu	37	22	29454984	29454984	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	170	1	0	0	0	0	0
EWSR1	2130	ucsc.edu	37	22	29678485	29678485	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	94	0	28	28	0	0	0
EWSR1	2130	ucsc.edu	37	22	29684660	29684660	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	75	0	83	82	1	0	0
EWSR1	2130	ucsc.edu	37	22	29694821	29694821	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	184	0	55	55	0	0	0
NF2	4771	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	30051666	30051666	+	Splice_Site	SNP	G	G	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	37	91	0	0	0	0	0	0
ZMAT5	55954	ucsc.edu	37	22	30127298	30127298	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	100	0	10	10	0	0	0
ZMAT5	55954	ucsc.edu	37	22	30134372	30134372	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	99	0	27	27	0	0	0
ASCC2	84164	ucsc.edu;bcgsc.ca	37	22	30212012	30212012	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	11	5	21	0	8	8	0	0	0
LIF	3976	ucsc.edu	37	22	30639826	30639826	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	113	1	6	6	0	0	0
SEC14L2	23541	ucsc.edu	37	22	30795669	30795669	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	105	0	5	5	0	0	0
MTFP1	51537	ucsc.edu	37	22	30824608	30824608	+	Missense_Mutation	SNP	C	C	A	rs145009856	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	124	0	9	9	0	0	0
SEC14L4	284904	ucsc.edu	37	22	30891409	30891409	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	114	0	0	0	0	0	0
LIMK2	3985	ucsc.edu	37	22	31655114	31655114	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	63	0	0	0	0	0	0
LIMK2	3985	ucsc.edu	37	22	31662077	31662077	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	112	0	6	6	0	0	0
PATZ1	23598	ucsc.edu	37	22	31741032	31741032	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	142	0	33	33	0	0	0
DRG1	4733	ucsc.edu	37	22	31829876	31829876	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	105	0	21	21	0	0	0
PRR14L	253143	ucsc.edu	37	22	32097678	32097678	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	87	0	1	1	0	0	0
BPIFC	254240	ucsc.edu	37	22	32838710	32838710	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	50	0	0	0	0	0	0
HMGXB4	10042	ucsc.edu	37	22	35659187	35659187	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	81	0	2	2	0	0	0
MCM5	4174	ucsc.edu;bcgsc.ca	37	22	35802566	35802566	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	7	91	0	11	11	0	0	0
APOL6	80830	ucsc.edu	37	22	36055550	36055550	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	88	0	17	17	0	0	0
NCF4	4689	ucsc.edu	37	22	37260973	37260973	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	114	0	0	0	0	0	0
NCF4	4689	ucsc.edu	37	22	37261053	37261053	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	126	1	4	4	0	0	0
MPST	4357	ucsc.edu	37	22	37425439	37425439	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	80	0	80	80	0	0	0
RAC2	5880	ucsc.edu	37	22	37627311	37627311	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	133	0	6	6	0	0	0
CYTH4	27128	ucsc.edu	37	22	37688718	37688718	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	120	1	0	0	0	0	0
H1F0	3005	ucsc.edu	37	22	38201666	38201666	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	131	0	214	212	0	1	0
MICALL1	85377	ucsc.edu	37	22	38323790	38323790	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	145	0	15	15	0	0	0
C22orf23	84645	ucsc.edu	37	22	38343441	38343441	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	92	0	1	1	0	0	0
APOBEC3B	9582	ucsc.edu	37	22	39382069	39382069	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	120	0	0	0	0	0	0
CBX7	23492	ucsc.edu	37	22	39537401	39537401	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	76	0	10	10	0	0	0
TAB1	10454	ucsc.edu	37	22	39824106	39824106	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	111	1	16	16	0	0	0
GRAP2	9402	ucsc.edu	37	22	40351835	40351835	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	39	0	0	0	0	0	0
TNRC6B	23112	ucsc.edu	37	22	40708964	40708964	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	37	0	7	7	0	0	0
ADSL	158	ucsc.edu	37	22	40754973	40754973	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	105	0	10	10	0	0	0
MCHR1	2847	ucsc.edu	37	22	41075459	41075459	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	87	0	0	0	0	0	0
MCHR1	2847	ucsc.edu	37	22	41076969	41076969	+	Silent	SNP	G	G	T	rs201202695	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	97	1	0	0	0	0	0
XPNPEP3	63929	bcgsc.ca	37	22	41318478	41318478	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	199	11	394	1	0	0	0	0	0
RBX1	9978	ucsc.edu	37	22	41360110	41360110	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	79	0	1	1	0	0	0
EP300	2033	ucsc.edu	37	22	41513271	41513271	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	84	0	4	4	0	0	0
EP300	2033	ucsc.edu	37	22	41548318	41548318	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	58	0	12	12	0	0	0
EP300	2033	ucsc.edu	37	22	41556702	41556702	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	119	0	13	13	0	0	0
L3MBTL2	83746	ucsc.edu	37	22	41609982	41609982	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	116	1	8	8	0	0	0
L3MBTL2	83746	ucsc.edu	37	22	41623811	41623811	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	80	0	0	0	0	0	0
RANGAP1	5905	ucsc.edu	37	22	41670661	41670661	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	125	0	21	21	0	0	0
ACO2	50	ucsc.edu	37	22	41919222	41919222	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	122	0	0	0	0	0	0
CSDC2	27254	ucsc.edu	37	22	41969750	41969750	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	146	1	6	6	0	0	0
PMM1	5372	ucsc.edu	37	22	41974828	41974828	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	62	0	38	38	0	0	0
XRCC6	2547	ucsc.edu	37	22	42033664	42033664	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	10	4	36	0	59	59	0	0	0
NHP2L1	4809	ucsc.edu	37	22	42071198	42071198	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	136	1	0	0	0	0	0
FAM109B	150368	ucsc.edu;bcgsc.ca	37	22	42473325	42473325	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	7	128	1	5	5	0	0	0
BIK	638	ucsc.edu	37	22	43524630	43524630	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	6	126	0	0	0	0	0	0
TTLL12	23170	ucsc.edu	37	22	43572371	43572371	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	15	4	33	0	14	14	0	0	0
TRMU	55687	ucsc.edu	37	22	46733691	46733691	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	89	0	1	1	0	0	0
CELSR1	9620	ucsc.edu	37	22	46787658	46787658	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	93	1	31	31	0	0	0
BRD1	23774	ucsc.edu	37	22	50181097	50181097	+	Missense_Mutation	SNP	C	C	A	rs140147452	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	88	0	16	16	0	0	0
ZBED4	9889	bcgsc.ca	37	22	50280734	50280734	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	6	101	1	6	6	0	0	0
MOV10L1	54456	ucsc.edu	37	22	50599121	50599121	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	83	0	0	0	0	0	0
PPP6R2	9701	ucsc.edu	37	22	50860714	50860714	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	6	160	0	7	7	0	0	0
SBF1	6305	ucsc.edu	37	22	50893763	50893763	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	84	0	37	37	0	0	0
SBF1	6305	ucsc.edu	37	22	50899974	50899974	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	4	43	0	27	27	0	0	0
SBF1	6305	ucsc.edu	37	22	50903274	50903274	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	106	0	35	35	0	0	0
MIOX	55586	ucsc.edu	37	22	50925341	50925341	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	72	0	0	0	0	0	0
NCAPH2	29781	ucsc.edu	37	22	50960660	50960660	+	Silent	SNP	C	C	A	rs143986871	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	87	0	29	29	0	0	0
TYMP	1890	ucsc.edu	37	22	50967610	50967610	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	124	1	47	47	0	0	0
ODF3B	440836	ucsc.edu	37	22	50969656	50969656	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	82	0	16	16	0	0	0
SHANK3	85358	ucsc.edu	37	22	51123028	51123028	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	107	0	0	0	0	0	0
CNTN4	152330	ucsc.edu	37	3	3085380	3085380	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	5	57	0	0	0	0	0	0
ITPR1	3708	ucsc.edu;bcgsc.ca	37	3	4693829	4693829	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	5	33	0	4	4	0	0	0
ITPR1	3708	bcgsc.ca	37	3	4735185	4735185	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	383	17	419	1	0	0	0	0	0
ITPR1	3708	bcgsc.ca	37	3	4810332	4810332	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	141	10	210	0	8	8	0	0	0
ITPR1	3708	ucsc.edu	37	3	4836768	4836768	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	38	0	10	10	0	0	0
ITPR1	3708	ucsc.edu	37	3	4836851	4836851	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	42	0	8	8	0	0	0
LMCD1	29995	ucsc.edu	37	3	8590490	8590490	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	88	0	12	12	0	0	0
SSUH2	51066	ucsc.edu;bcgsc.ca	37	3	8661563	8661563	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	79	9	106	0	0	0	0	0	0
THUMPD3	25917	bcgsc.ca	37	3	9425943	9425943	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	411	19	408	0	41	41	0	0	0
SETD5	55209	ucsc.edu	37	3	9512444	9512444	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	71	0	21	21	0	0	0
EMC3	55831	bcgsc.ca	37	3	10005855	10005855	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	83	7	83	0	46	46	0	0	0
FANCD2	2177	ucsc.edu;bcgsc.ca	37	3	10107580	10107580	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	87	9	73	0	2	2	0	0	0
FANCD2	2177	ucsc.edu	37	3	10108924	10108924	+	Missense_Mutation	SNP	C	C	A	rs34964213	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	33	0	3	3	0	0	0
FANCD2	2177	bcgsc.ca	37	3	10123051	10123051	+	Missense_Mutation	SNP	G	G	T	rs142238966	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	198	12	171	1	3	3	0	0	0
ATP2B2	491	ucsc.edu	37	3	10391806	10391806	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	85	2	0	0	0	0	0
TSEN2	80746	ucsc.edu	37	3	12545099	12545099	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	53	1	16	16	0	0	0
MKRN2	23609	bcgsc.ca	37	3	12623388	12623388	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	172	10	259	1	24	24	0	0	0
IQSEC1	9922	ucsc.edu	37	3	12966229	12966229	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	91	0	0	0	0	0	0
IQSEC1	9922	ucsc.edu	37	3	12977978	12977978	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	72	0	13	13	0	0	0
HDAC11	79885	bcgsc.ca	37	3	13525003	13525003	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	178	10	209	0	28	28	0	0	0
GALNT15	117248	ucsc.edu	37	3	16242298	16242298	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	74	0	0	0	0	0	0
RARB	5915	bcgsc.ca	37	3	25622195	25622195	+	Silent	SNP	C	C	A	rs115482149	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	133	8	149	0	6	6	0	0	0
NEK10	152110	ucsc.edu	37	3	27385843	27385843	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	5	16	0	1	1	0	0	0
RBMS3	27303	ucsc.edu	37	3	29977683	29977683	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	50	0	0	0	0	0	0
OSBPL10	114884	bcgsc.ca	37	3	31705606	31705606	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	125	8	204	0	29	29	0	0	0
GLB1	2720	bcgsc.ca	37	3	33093274	33093274	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	133	10	114	0	101	100	0	1	0
SUSD5	26032	ucsc.edu	37	3	33195000	33195000	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	64	0	0	0	0	0	0
UBP1	7342	bcgsc.ca	37	3	33453137	33453137	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	139	10	123	1	26	26	0	0	0
CLASP2	23122	ucsc.edu	37	3	33618702	33618702	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	6	56	0	0	0	0	0	0
CLASP2	23122	ucsc.edu	37	3	33686249	33686249	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	41	0	0	0	0	0	0
ARPP21	10777	bcgsc.ca	37	3	35833977	35833977	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	149	9	146	1	0	0	0	0	0
TRANK1	9881	ucsc.edu	37	3	36898487	36898487	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	54	0	1	1	0	0	0
ACVR2B	93	bcgsc.ca	37	3	38520644	38520644	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	186	9	295	1	2	2	0	0	0
SCN10A	6336	bcgsc.ca	37	3	38738848	38738848	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	96	8	135	0	0	0	0	0	0
XIRP1	165904	ucsc.edu	37	3	39228828	39228828	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	77	0	0	0	0	0	0
MOBP	4336	ucsc.edu	37	3	39554900	39554900	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	44	0	1	1	0	0	0
MYRIP	25924	bcgsc.ca	37	3	40231346	40231346	+	Missense_Mutation	SNP	G	G	T	rs151142713	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	114	7	179	0	1	1	0	0	0
MYRIP	25924	ucsc.edu	37	3	40231954	40231954	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	6	40	0	0	0	0	0	0
VIPR1	7433	bcgsc.ca	37	3	42576539	42576539	+	Silent	SNP	G	G	T	rs111391404	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	194	10	206	0	0	0	0	0	0
HHATL	57467	ucsc.edu;bcgsc.ca	37	3	42740367	42740367	+	Missense_Mutation	SNP	C	C	A	rs148287985	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	11	159	0	0	0	0	0	0
CCDC13	152206	bcgsc.ca	37	3	42774962	42774962	+	Missense_Mutation	SNP	C	C	A	rs142230659	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	340	13	436	1	0	0	0	0	0
CCDC13	152206	ucsc.edu	37	3	42777358	42777358	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	62	0	0	0	0	0	0
LARS2	23395	ucsc.edu	37	3	45559536	45559536	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	56	0	18	18	0	0	0
LIMD1	8994	ucsc.edu	37	3	45636640	45636640	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	69	0	17	17	0	0	0
SLC6A20	54716	bcgsc.ca	37	3	45817362	45817362	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	98	7	193	0	31	31	0	0	0
FYCO1	79443	bcgsc.ca	37	3	45996860	45996860	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	232	11	271	1	13	13	0	0	0
CCR2	729230	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	46399085	46399085	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	280	136	280	1	1	1	0	0	0
ALS2CL	259173	ucsc.edu	37	3	46719827	46719827	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	54	0	13	13	0	0	0
ALS2CL	259173	ucsc.edu	37	3	46724683	46724683	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	66	0	11	11	0	0	0
PRSS45	377047	ucsc.edu	37	3	46786207	46786207	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	46	0	0	0	0	0	0
NBEAL2	23218	ucsc.edu	37	3	47037458	47037458	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	46	0	8	8	0	0	0
PTPN23	25930	ucsc.edu	37	3	47454310	47454310	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	103	1	28	28	0	0	0
SMARCC1	6599	bcgsc.ca	37	3	47762162	47762162	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	399	17	331	2	0	0	0	0	0
DHX30	22907	ucsc.edu	37	3	47891410	47891410	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	6	105	0	34	34	0	0	0
MAP4	4134	bcgsc.ca	37	3	47956413	47956413	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	232	11	216	1	137	137	0	0	0
MAP4	4134	ucsc.edu	37	3	47960332	47960332	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	6	52	0	0	0	0	0	0
COL7A1	1294	ucsc.edu	37	3	48624942	48624942	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	88	0	3	3	0	0	0
COL7A1	1294	ucsc.edu;bcgsc.ca	37	3	48627055	48627055	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	55	8	110	0	3	3	0	0	0
SLC26A6	65010	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	48668741	48668741	+	Splice_Site	SNP	T	T	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	13	8	24	0	1	0	1	0	0
IP6K2	51447	ucsc.edu	37	3	48732502	48732502	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	58	0	12	12	0	0	0
WDR6	11180	bcgsc.ca	37	3	49049745	49049745	+	Missense_Mutation	SNP	C	C	A	rs144741396	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	101	7	160	0	52	52	0	0	0
GPX1	2876	ucsc.edu	37	3	49394910	49394910	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	4	107	0	645	644	1	0	0
RNF123	63891	ucsc.edu	37	3	49728652	49728652	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	7	81	0	26	26	0	0	0
RNF123	63891	ucsc.edu	37	3	49737727	49737727	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	84	0	24	24	0	0	0
TRAIP	10293	ucsc.edu	37	3	49885584	49885584	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	46	0	0	0	0	0	0
RBM6	10180	ucsc.edu	37	3	50005492	50005492	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	70	7	78	0	9	9	0	0	0
SEMA3F	6405	ucsc.edu	37	3	50211663	50211663	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	107	0	0	0	0	0	0
SLC38A3	10991	ucsc.edu	37	3	50251674	50251674	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	67	0	0	0	0	0	0
IFRD2	7866	ucsc.edu	37	3	50326035	50326035	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	98	0	34	34	0	0	0
HYAL3	8372	ucsc.edu;bcgsc.ca	37	3	50332355	50332355	+	Missense_Mutation	SNP	G	G	T	rs141285629	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	8	116	0	0	0	0	0	0
HYAL1	3373	ucsc.edu	37	3	50340204	50340204	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	112	0	51	51	0	0	0
HYAL2	8692	ucsc.edu	37	3	50357110	50357110	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	67	0	42	42	0	0	0
ZMYND10	51364	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	50379017	50379017	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	78	30	126	0	0	0	0	0	0
CACNA2D2	9254	ucsc.edu	37	3	50415493	50415493	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	135	0	2	2	0	0	0
RAD54L2	23132	ucsc.edu	37	3	51680475	51680475	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	30	0	6	6	0	0	0
ABHD14A	25864	ucsc.edu	37	3	52012070	52012070	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	60	0	22	22	0	0	0
ACY1	95	ucsc.edu	37	3	52021024	52021024	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	86	0	208	207	1	0	0
ACY1	95	bcgsc.ca	37	3	52021193	52021193	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	156	9	227	0	207	207	0	0	0
POC1A	25886	ucsc.edu	37	3	52181037	52181037	+	Missense_Mutation	SNP	C	C	A	rs150182187	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	71	8	106	2	3	3	0	0	0
TLR9	54106	ucsc.edu	37	3	52257666	52257666	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	56	0	0	0	0	0	0
BAP1	8314	ucsc.edu	37	3	52437260	52437260	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	68	0	82	82	0	0	0
BAP1	8314	ucsc.edu	37	3	52438503	52438503	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	60	0	24	24	0	0	0
NISCH	11188	ucsc.edu	37	3	52522473	52522473	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	7	136	1	40	40	0	0	0
STAB1	23166	ucsc.edu	37	3	52536031	52536031	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	72	0	0	0	0	0	0
STAB1	23166	ucsc.edu	37	3	52536085	52536085	+	Missense_Mutation	SNP	G	G	T	rs142679283		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	81	0	4	4	0	0	0
STAB1	23166	ucsc.edu	37	3	52549487	52549487	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	103	0	2	2	0	0	0
STAB1	23166	ucsc.edu	37	3	52554482	52554482	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	56	1	2	2	0	0	0
STAB1	23166	ucsc.edu	37	3	52557530	52557530	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	84	0	11	11	0	0	0
STAB1	23166	ucsc.edu	37	3	52557718	52557718	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	6	74	0	6	6	0	0	0
NEK4	6787	bcgsc.ca	37	3	52802366	52802366	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	398	17	356	1	2	2	0	0	0
TMEM110-MUSTN1	100526772	ucsc.edu	37	3	52883896	52883896	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	40	0	5	5	0	0	0
RFT1	91869	bcgsc.ca	37	3	53139716	53139716	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	309	17	274	0	10	10	0	0	0
TKT	7086	ucsc.edu	37	3	53265566	53265566	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	48	0	1	1	0	0	0
CACNA1D	776	ucsc.edu	37	3	53820951	53820951	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	66	0	7	7	0	0	0
IL17RB	55540	bcgsc.ca	37	3	53894170	53894170	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	313	17	345	2	6	6	0	0	0
ACTR8	93973	ucsc.edu	37	3	53907076	53907076	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	32	0	33	33	0	0	0
CACNA2D3	55799	ucsc.edu	37	3	55003871	55003871	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	72	0	0	0	0	0	0
WNT5A	7474	ucsc.edu	37	3	55514884	55514884	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	18	4	13	0	71	71	0	0	0
FAM208A	23272	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	56658883	56658883	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	147	58	121	0	28	14	14	0	0
IL17RD	54756	ucsc.edu	37	3	57131876	57131876	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	59	0	24	24	0	0	0
FLNB	2317	ucsc.edu	37	3	58134391	58134391	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	7	98	0	151	151	0	0	0
ACOX2	8309	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	58517532	58517532	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	18	79	0	0	0	0	0	0
SYNPR	132204	ucsc.edu	37	3	63594950	63594950	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	18	0	0	0	0	0	0
PRICKLE2	166336	ucsc.edu	37	3	64085053	64085053	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	90	0	8	8	0	0	0
MAGI1	9223	bcgsc.ca	37	3	65464368	65464368	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	150	9	163	2	8	8	0	0	0
MITF	4286	ucsc.edu	37	3	69928456	69928456	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	64	0	34	34	0	0	0
GXYLT2	727936	bcgsc.ca	37	3	72971485	72971485	+	Missense_Mutation	SNP	C	C	A	rs144493258	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	156	8	188	1	0	0	0	0	0
GBE1	2632	ucsc.edu	37	3	81640209	81640209	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	23	0	28	28	0	0	0
CADM2	253559	bcgsc.ca	37	3	86010671	86010671	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	223	9	157	0	0	0	0	0	0
VGLL3	389136	ucsc.edu	37	3	87027875	87027875	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	54	0	0	0	0	0	0
CHMP2B	25978	bcgsc.ca	37	3	87276675	87276675	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	122	9	146	0	50	50	0	0	0
POU1F1	5449	ucsc.edu;bcgsc.ca	37	3	87322540	87322540	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	76	9	69	0	0	0	0	0	0
EPHA3	2042	hgsc.bcm.edu;bcgsc.ca	37	3	89521663	89521663	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	249	16	250	0	1	1	0	0	0
EPHA6	285220	bcgsc.ca	37	3	96706414	96706414	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	310	13	302	0	0	0	0	0	0
COL8A1	1295	ucsc.edu	37	3	99514447	99514447	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	97	0	76	76	0	0	0
ZBTB11	27107	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	101370105	101370105	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	168	70	181	0	15	6	9	0	0
NXPE3	91775	bcgsc.ca	37	3	101540716	101540716	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	114	8	150	0	9	8	0	0	1
CBLB	868	bcgsc.ca	37	3	105377943	105377943	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	162	12	164	0	16	16	0	0	0
BBX	56987	bcgsc.ca	37	3	107447727	107447727	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	419	18	394	2	33	33	0	0	0
BOC	91653	ucsc.edu	37	3	112992181	112992181	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	18	4	26	0	0	0	0	0	0
KIAA2018	205717	bcgsc.ca	37	3	113375409	113375409	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	120	10	129	0	2	2	0	0	0
KIAA2018	205717	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	113376409	113376409	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	96	38	112	0	2	2	0	0	0
B4GALT4	8702	bcgsc.ca	37	3	118935163	118935163	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	149	11	111	0	23	23	0	0	0
ADPRH	141	ucsc.edu	37	3	119306534	119306534	+	Silent	SNP	C	C	A	rs190409478	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	69	7	103	0	1	1	0	0	0
PLA1A	51365	bcgsc.ca	37	3	119347675	119347675	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	163	10	195	0	0	0	0	0	0
POPDC2	64091	ucsc.edu	37	3	119379192	119379192	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	74	0	0	0	0	0	0
FSTL1	11167	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	120122159	120122159	+	Silent	SNP	A	A	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	156	65	132	0	181	91	90	0	0
STXBP5L	9515	ucsc.edu	37	3	121097633	121097633	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	45	0	0	0	0	0	0
STXBP5L	9515	ucsc.edu	37	3	121137297	121137297	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	7	75	0	0	0	0	0	0
GOLGB1	2804	bcgsc.ca	37	3	121445795	121445795	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	174	12	144	0	19	19	0	0	0
KPNA1	3836	bcgsc.ca	37	3	122215330	122215330	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	108	9	108	0	20	20	0	0	0
SEMA5B	54437	ucsc.edu	37	3	122667515	122667515	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	65	0	1	1	0	0	0
KALRN	8997	bcgsc.ca	37	3	124048795	124048795	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	82	8	151	0	10	10	0	0	0
SLC12A8	84561	ucsc.edu	37	3	124854621	124854621	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	45	1	0	0	0	0	0
FAM86JP	100125556	ucsc.edu	37	3	125639720	125639720	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	76	0	6	6	0	0	0
SLC41A3	54946	ucsc.edu	37	3	125769828	125769828	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	33	0	79	79	0	0	0
CCDC37	348807	ucsc.edu	37	3	126154407	126154407	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	97	0	0	0	0	0	0
PLXNA1	5361	ucsc.edu	37	3	126736708	126736708	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	90	0	24	24	0	0	0
MCM2	4171	bcgsc.ca	37	3	127327735	127327735	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	170	12	257	0	19	19	0	0	0
RUVBL1	8607	ucsc.edu	37	3	127816329	127816329	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	5	80	0	0	0	0	0	0
ISY1	57461	bcgsc.ca	37	3	128878016	128878016	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	189	13	98	0	0	0	0	0	0
COPG1	22820	bcgsc.ca	37	3	128979534	128979534	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	87	7	123	0	69	68	1	0	0
TRH	7200	ucsc.edu	37	3	129696016	129696016	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	61	0	0	0	0	0	0
FAM86HP	729375	ucsc.edu	37	3	129824411	129824411	+	RNA	SNP	C	C	A	rs142125871	by1000genomes;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	56	0	2	2	0	0	0
COL6A6	131873	hgsc.bcm.edu;bcgsc.ca	37	3	130311918	130311918	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	395	66	413	0	0	0	0	0	0
COL6A6	131873	ucsc.edu	37	3	130394226	130394226	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	5	21	0	0	0	0	0	0
PIK3R4	30849	bcgsc.ca	37	3	130452802	130452802	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	268	14	245	0	2	2	0	0	0
DNAJC13	23317	bcgsc.ca	37	3	132198110	132198110	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	147	11	114	0	11	11	0	0	0
DNAJC13	23317	bcgsc.ca	37	3	132222185	132222185	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	185	11	157	1	25	25	0	0	0
ACAD11	84129	ucsc.edu	37	3	132278761	132278761	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	37	0	18	18	0	0	0
BFSP2	8419	ucsc.edu	37	3	133166187	133166187	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	64	0	0	0	0	0	0
RYK	6259	ucsc.edu	37	3	133894783	133894783	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	5	17	0	0	0	0	0	0
EPHB1	2047	ucsc.edu	37	3	134977903	134977903	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	5	34	0	0	0	0	0	0
DZIP1L	199221	ucsc.edu	37	3	137822313	137822313	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	73	0	0	0	0	0	0
SLC25A36	55186	bcgsc.ca	37	3	140675513	140675513	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	206	11	181	0	52	52	0	0	0
ATR	545	bcgsc.ca	37	3	142231182	142231182	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	176	10	156	0	13	13	0	0	0
PLS1	5357	bcgsc.ca	37	3	142405175	142405175	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	197	12	146	0	27	27	0	0	0
CHST2	9435	ucsc.edu	37	3	142840620	142840620	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	31	0	0	0	0	0	0
PLOD2	5352	ucsc.edu	37	3	145788584	145788584	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	7	51	0	54	54	0	0	0
HPS3	84343	bcgsc.ca	37	3	148868412	148868412	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	136	8	142	0	13	13	0	0	0
WWTR1	25937	ucsc.edu	37	3	149375062	149375062	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	39	0	55	55	0	0	0
TSC22D2	9819	ucsc.edu;bcgsc.ca	37	3	150128902	150128902	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	101	11	131	0	9	9	0	0	0
EIF2A	83939	bcgsc.ca	37	3	150290316	150290316	+	Missense_Mutation	SNP	G	G	T	rs201145285	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	188	13	118	0	0	0	0	0	0
FAM194A	131831	ucsc.edu	37	3	150421460	150421460	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	79	0	2	2	0	0	0
P2RY1	5028	bcgsc.ca	37	3	152554237	152554237	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	149	9	177	0	0	0	0	0	0
GPR149	344758	bcgsc.ca	37	3	154055990	154055990	+	Missense_Mutation	SNP	C	C	A	rs201763792	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	226	12	280	0	0	0	0	0	0
GPR149	344758	bcgsc.ca	37	3	154146430	154146430	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	242	14	278	2	0	0	0	0	0
LEKR1	389170	ucsc.edu;bcgsc.ca	37	3	156745977	156745977	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	78	8	63	0	0	0	0	0	0
LEKR1	389170	bcgsc.ca	37	3	156763372	156763372	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	123	8	198	0	0	0	0	0	0
VEPH1	79674	bcgsc.ca	37	3	157081192	157081192	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	250	13	189	1	14	14	0	0	0
RSRC1	51319	bcgsc.ca	37	3	157841739	157841739	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	143	10	114	0	11	11	0	0	0
SLITRK3	22865	bcgsc.ca	37	3	164907493	164907493	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	199	11	292	0	0	0	0	0	0
PLD1	5337	ucsc.edu	37	3	171406471	171406471	+	Missense_Mutation	SNP	G	G	T	rs147422973	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	100	0	0	0	0	0	0
FNDC3B	64778	bcgsc.ca	37	3	172062009	172062009	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	121	8	215	0	59	58	0	1	0
ZMAT3	64393	bcgsc.ca	37	3	178742842	178742842	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	265	14	230	0	57	57	0	0	0
NDUFB5	4711	bcgsc.ca	37	3	179341806	179341806	+	Missense_Mutation	SNP	C	C	A	rs200889798	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	146	9	91	0	118	118	0	0	0
LAMP3	27074	bcgsc.ca	37	3	182870222	182870222	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	370	18	373	0	0	0	0	0	0
MCF2L2	23101	bcgsc.ca	37	3	182910813	182910813	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	170	10	170	0	0	0	0	0	0
YEATS2	55689	bcgsc.ca	37	3	183471950	183471950	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	237	11	255	0	11	11	0	0	0
YEATS2	55689	ucsc.edu	37	3	183524803	183524803	+	Nonsense_Mutation	SNP	G	G	T	rs190474641	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	59	0	3	3	0	0	0
ABCC5	10057	bcgsc.ca	37	3	183663665	183663665	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	404	17	431	1	7	7	0	0	0
DVL3	1857	ucsc.edu	37	3	183885712	183885712	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	86	0	60	60	0	0	0
AP2M1	1173	ucsc.edu	37	3	183894833	183894833	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	62	1	183	183	0	0	0
ECE2	9718	ucsc.edu	37	3	184009225	184009225	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	85	0	0	0	0	0	0
PSMD2	5708	bcgsc.ca	37	3	184021849	184021849	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	156	11	183	3	0	0	0	0	0
CLCN2	1181	ucsc.edu	37	3	184070599	184070599	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	49	0	0	0	0	0	0
CHRD	8646	ucsc.edu	37	3	184105799	184105799	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	57	0	3	3	0	0	0
SENP2	59343	bcgsc.ca	37	3	185327065	185327065	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	120	9	85	0	17	17	0	0	0
IGF2BP2	10644	ucsc.edu	37	3	185375143	185375143	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	72	7	92	0	28	28	0	0	0
ETV5	2119	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	185766603	185766603	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	25	73	0	8	7	1	0	0
MASP1	5648	ucsc.edu;bcgsc.ca	37	3	186953790	186953790	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	89	9	131	0	23	23	0	0	0
TP63	8626	ucsc.edu	37	3	189507599	189507599	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	20	0	0	0	0	0	0
LEPREL1	55214	ucsc.edu;bcgsc.ca	37	3	189692466	189692466	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	74	8	110	0	0	0	0	0	0
HES1	3280	ucsc.edu	37	3	193855917	193855917	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	69	0	61	61	0	0	0
CPN2	1370	ucsc.edu	37	3	194062972	194062972	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	95	0	0	0	0	0	0
ATP13A3	79572	bcgsc.ca	37	3	194181451	194181451	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	197	10	190	2	44	44	0	0	0
LSG1	55341	ucsc.edu	37	3	194362952	194362952	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	69	7	84	0	5	5	0	0	0
MUC4	4585	ucsc.edu	37	3	195481190	195481190	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	105	0	0	0	0	0	0
TFRC	7037	ucsc.edu	37	3	195791207	195791207	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	74	7	72	0	5	5	0	0	0
ZNF718	255403	ucsc.edu	37	4	155780	155780	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	30	0	9	9	0	0	0
PDE6B	5158	ucsc.edu	37	4	654315	654315	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	58	0	2	2	0	0	0
GAK	2580	ucsc.edu	37	4	884384	884384	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	38	0	27	27	0	0	0
GAK	2580	ucsc.edu	37	4	884405	884405	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	41	0	0	0	0	0	0
MAEA	10296	ucsc.edu	37	4	1330648	1330648	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	55	0	3	3	0	0	0
HGFAC	3083	bcgsc.ca	37	4	3444467	3444467	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	135	9	289	0	0	0	0	0	0
HGFAC	3083	ucsc.edu	37	4	3447834	3447834	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	4	33	0	10	10	0	0	0
ADRA2C	152	ucsc.edu	37	4	3768717	3768717	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	44	1	0	0	0	0	0
OTOP1	133060	bcgsc.ca	37	4	4198930	4198930	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	137	10	139	0	0	0	0	0	0
EVC2	132884	ucsc.edu	37	4	5624345	5624345	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	53	1	11	11	0	0	0
JAKMIP1	152789	bcgsc.ca	37	4	6086622	6086622	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	343	13	379	0	0	0	0	0	0
JAKMIP1	152789	ucsc.edu	37	4	6087187	6087187	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	100	0	0	0	0	0	0
WFS1	7466	bcgsc.ca	37	4	6303479	6303479	+	Missense_Mutation	SNP	C	C	A	rs201064551	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	244	12	349	0	11	11	0	0	0
WFS1	7466	ucsc.edu	37	4	6303818	6303818	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	61	0	19	19	0	0	0
KIAA0232	9778	bcgsc.ca	37	4	6865402	6865402	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	132	10	126	0	13	13	0	0	0
TBC1D14	57533	ucsc.edu	37	4	7026982	7026982	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	77	0	0	0	0	0	0
AFAP1	60312	ucsc.edu	37	4	7802263	7802263	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	6	104	0	12	12	0	0	0
CPZ	8532	ucsc.edu	37	4	8602987	8602987	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	6	72	0	0	0	0	0	0
CPZ	8532	ucsc.edu	37	4	8621185	8621185	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	78	1	0	0	0	0	0
SLC2A9	56606	ucsc.edu	37	4	9982311	9982311	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	78	1	110	110	0	0	0
CPEB2	132864	bcgsc.ca	37	4	15018863	15018863	+	Missense_Mutation	SNP	C	C	A	rs144630360	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	138	10	99	1	22	22	0	0	0
CD38	952	ucsc.edu	37	4	15839738	15839738	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	80	8	62	0	1	1	0	0	0
QDPR	5860	ucsc.edu;bcgsc.ca	37	4	17492314	17492314	+	Missense_Mutation	SNP	G	G	T	rs112242659	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	90	0	26	26	0	0	0
SLIT2	9353	bcgsc.ca	37	4	20541095	20541095	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	139	10	109	1	3	3	0	0	0
PPARGC1A	10891	bcgsc.ca	37	4	23830214	23830214	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	117	8	116	0	62	62	0	0	0
SEL1L3	23231	ucsc.edu	37	4	25831767	25831767	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	40	0	0	0	0	0	0
CCKAR	886	ucsc.edu	37	4	26487516	26487516	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	35	0	0	0	0	0	0
ARAP2	116984	bcgsc.ca	37	4	36231049	36231049	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	140	10	138	1	3	3	0	0	0
KLF3	51274	bcgsc.ca	37	4	38696423	38696423	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	147	10	173	0	52	52	0	0	0
RFC1	5981	bcgsc.ca	37	4	39306528	39306528	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	490	18	572	1	29	29	0	0	0
BEND4	389206	ucsc.edu	37	4	42145945	42145945	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	24	0	0	0	0	0	0
GABRA4	2557	ucsc.edu	37	4	46973116	46973116	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	33	0	0	0	0	0	0
TEC	7006	bcgsc.ca	37	4	48143407	48143407	+	Silent	SNP	C	C	A	rs199764131	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	102	7	51	0	3	3	0	0	0
FRYL	285527	ucsc.edu	37	4	48548234	48548234	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	38	0	11	11	0	0	0
FRYL	285527	bcgsc.ca	37	4	48550747	48550747	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	126	9	80	0	4	4	0	0	0
DCUN1D4	23142	bcgsc.ca	37	4	52729869	52729869	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	131	10	71	0	0	0	0	0	0
KDR	3791	bcgsc.ca	37	4	55963934	55963934	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	123	10	97	0	0	0	0	0	0
REST	5978	ucsc.edu	37	4	57796967	57796967	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	58	0	7	7	0	0	0
NOA1	84273	bcgsc.ca	37	4	57832903	57832903	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	88	9	86	0	0	0	0	0	0
POLR2B	5431	ucsc.edu	37	4	57860656	57860656	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	5	31	0	36	36	0	0	0
LPHN3	23284	bcgsc.ca	37	4	62845292	62845292	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	330	12	354	1	0	0	0	0	0
LPHN3	23284	bcgsc.ca	37	4	62897165	62897165	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	207	13	152	1	0	0	0	0	0
TMPRSS11D	9407	bcgsc.ca	37	4	68699029	68699029	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	224	12	260	0	0	0	0	0	0
YTHDC1	91746	bcgsc.ca	37	4	69188586	69188586	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	159	9	143	0	54	54	0	0	0
UGT2B7	7364	bcgsc.ca	37	4	69973895	69973895	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	193	14	243	0	166	166	0	0	0
UGT2A1	10941	ucsc.edu	37	4	70460382	70460382	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	5	52	0	14	14	0	0	0
GRSF1	2926	bcgsc.ca	37	4	71698865	71698865	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	248	13	193	0	98	98	0	0	0
SLC4A4	8671	hgsc.bcm.edu;bcgsc.ca	37	4	72332250	72332250	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	178	11	183	0	17	17	0	0	0
GC	2638	bcgsc.ca	37	4	72620742	72620742	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	116	9	90	0	0	0	0	0	0
ADAMTS3	9508	bcgsc.ca	37	4	73169667	73169667	+	Silent	SNP	G	G	T	rs188872063	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	224	11	211	0	2	2	0	0	0
ANKRD17	26057	bcgsc.ca	37	4	73984440	73984440	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	209	10	212	0	12	12	0	0	0
CXCL2	2920	bcgsc.ca	37	4	74964353	74964353	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	107	9	125	0	1	1	0	0	0
PPEF2	5470	bcgsc.ca	37	4	76805747	76805747	+	Missense_Mutation	SNP	C	C	A	rs138968088	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	297	18	245	0	0	0	0	0	0
CXCL11	6373	bcgsc.ca	37	4	76957080	76957080	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	170	12	102	1	0	0	0	0	0
BMP2K	55589	ucsc.edu	37	4	79832286	79832286	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	6	81	0	9	9	0	0	0
ANTXR2	118429	bcgsc.ca	37	4	80929764	80929764	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	6	44	0	0	0	0	0	0
ANTXR2	118429	ucsc.edu	37	4	80976349	80976349	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	12	0	2	2	0	0	0
PRKG2	5593	bcgsc.ca	37	4	82065465	82065465	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	152	11	113	0	0	0	0	0	0
TMEM150C	441027	bcgsc.ca	37	4	83411361	83411361	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	277	12	224	0	5	5	0	0	0
THAP9	79725	bcgsc.ca	37	4	83840026	83840026	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	234	12	130	0	3	3	0	0	0
HPSE	10855	ucsc.edu	37	4	84230619	84230619	+	Missense_Mutation	SNP	C	C	A	rs11099592	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	111	10	70	0	0	0	0	0	0
AGPAT9	84803	bcgsc.ca	37	4	84465719	84465719	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	325	15	247	0	3	3	0	0	0
AGPAT9	84803	bcgsc.ca	37	4	84508463	84508463	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	292	16	224	0	4	4	0	0	0
WDFY3	23001	bcgsc.ca	37	4	85634365	85634365	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	292	13	291	0	21	21	0	0	0
WDFY3	23001	bcgsc.ca	37	4	85752723	85752723	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	204	9	162	0	20	20	0	0	0
PTPN13	5783	ucsc.edu	37	4	87556477	87556477	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	26	0	4	4	0	0	0
PTPN13	5783	ucsc.edu	37	4	87607903	87607903	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	11	0	18	17	0	0	1
AFF1	4299	ucsc.edu	37	4	88029464	88029464	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	5	66	0	0	0	0	0	0
DSPP	1834	ucsc.edu	37	4	88533669	88533669	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	45	0	0	0	0	0	0
DSPP	1834	ucsc.edu	37	4	88533982	88533982	+	Missense_Mutation	SNP	C	C	A	rs141644121	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	52	0	0	0	0	0	0
PIGY	84992	ucsc.edu	37	4	89442924	89442924	+	Missense_Mutation	SNP	G	G	T	rs143548787	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	44	0	70	70	0	0	0
MMRN1	22915	bcgsc.ca	37	4	90849065	90849065	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	242	14	153	0	0	0	0	0	0
SMARCAD1	56916	bcgsc.ca	37	4	95201836	95201836	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	197	11	156	1	15	15	0	0	0
ADH1A	124	bcgsc.ca	37	4	100201317	100201317	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	304	17	367	1	0	0	0	0	0
MANBA	4126	ucsc.edu	37	4	103556062	103556062	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	78	0	6	6	0	0	0
SLC9B2	133308	bcgsc.ca	37	4	103950024	103950024	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	174	11	88	0	0	0	0	0	0
TBCK	93627	ucsc.edu	37	4	107156470	107156470	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	46	0	21	21	0	0	0
AGXT2L1	64850	bcgsc.ca	37	4	109681383	109681383	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	241	11	206	2	0	0	0	0	0
COL25A1	84570	ucsc.edu	37	4	109790299	109790299	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	37	0	0	0	0	0	0
LRIT3	345193	bcgsc.ca	37	4	110791018	110791018	+	Silent	SNP	G	G	T	rs181208057	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	264	13	300	0	0	0	0	0	0
EGF	1950	ucsc.edu	37	4	110880518	110880518	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	69	7	75	0	0	0	0	0	0
ENPEP	2028	bcgsc.ca	37	4	111470878	111470878	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	119	8	100	0	0	0	0	0	0
C4orf21	55345	ucsc.edu	37	4	113460842	113460842	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	6	35	0	0	0	0	0	0
ANK2	287	hgsc.bcm.edu;bcgsc.ca	37	4	114177035	114177035	+	Missense_Mutation	SNP	C	C	A	rs143043717	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	198	13	291	0	1	1	0	0	0
ANK2	287	bcgsc.ca	37	4	114257055	114257055	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	122	9	133	0	3	3	0	0	0
ANK2	287	bcgsc.ca	37	4	114294593	114294593	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	145	9	118	0	1	1	0	0	0
NDST4	64579	ucsc.edu	37	4	115998089	115998089	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	49	0	0	0	0	0	0
SYNPO2	171024	bcgsc.ca	37	4	119978724	119978724	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	114	8	124	1	0	0	0	0	0
MYOZ2	51778	bcgsc.ca	37	4	120072082	120072082	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	99	10	96	1	0	0	0	0	0
NDNF	79625	bcgsc.ca	37	4	121957748	121957748	+	Missense_Mutation	SNP	G	G	T	rs143875438	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	198	13	221	1	0	0	0	0	0
QRFPR	84109	ucsc.edu	37	4	122301608	122301608	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	64	0	9	9	0	0	0
TRPC3	7222	ucsc.edu	37	4	122854153	122854153	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	78	0	2	2	0	0	0
KIAA1109	84162	ucsc.edu	37	4	123161107	123161107	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	6	67	0	8	8	0	0	0
KIAA1109	84162	bcgsc.ca	37	4	123271182	123271182	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	169	9	186	0	21	21	0	0	0
FAT4	79633	ucsc.edu	37	4	126238367	126238367	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	66	1	3	3	0	0	0
FAT4	79633	ucsc.edu	37	4	126238619	126238619	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	84	0	0	0	0	0	0
FAT4	79633	bcgsc.ca	37	4	126336141	126336141	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	280	13	272	1	4	4	0	0	0
NAA15	80155	bcgsc.ca	37	4	140299970	140299970	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	167	11	116	0	7	7	0	0	0
GAB1	2549	bcgsc.ca	37	4	144361256	144361256	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	77	8	74	0	18	18	0	0	0
ABCE1	6059	ucsc.edu	37	4	146025567	146025567	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	40	0	11	11	0	0	0
SMAD1	4086	ucsc.edu	37	4	146461144	146461144	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	90	0	9	9	0	0	0
DCLK2	166614	ucsc.edu	37	4	151169530	151169530	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	82	1	0	0	0	0	0
MAB21L2	10586	ucsc.edu	37	4	151504365	151504365	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	64	0	0	0	0	0	0
PRSS48	345062	bcgsc.ca	37	4	152212393	152212393	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	189	11	192	0	1	1	0	0	0
FHDC1	85462	ucsc.edu	37	4	153896347	153896347	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	70	7	114	0	0	0	0	0	0
FGB	2244	ucsc.edu	37	4	155487113	155487113	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	6	85	0	0	0	0	0	0
GUCY1A3	2982	bcgsc.ca	37	4	156632004	156632004	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	199	10	198	0	20	20	0	0	0
GRIA2	2891	bcgsc.ca	37	4	158142910	158142910	+	Silent	SNP	C	C	A	rs140732434	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	113	9	137	0	0	0	0	0	0
RXFP1	59350	bcgsc.ca	37	4	159533318	159533318	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	302	13	164	0	0	0	0	0	0
MIR5684	100847071	bcgsc.ca	37	4	165577841	165577841	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	16	5	31	0	0	0	0	0	0
DDX60L	91351	ucsc.edu	37	4	169377255	169377255	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	30	0	5	5	0	0	0
ADAM29	11086	bcgsc.ca	37	4	175897607	175897607	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	191	11	193	1	0	0	0	0	0
VEGFC	7424	bcgsc.ca	37	4	177608988	177608988	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	168	11	126	0	0	0	0	0	0
LOC285501	0	bcgsc.ca	37	4	178897010	178897010	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	205	10	184	1	0	0	0	0	0
TENM3	55714	ucsc.edu	37	4	183676135	183676135	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	69	0	3	3	0	0	0
WWC2	80014	ucsc.edu	37	4	184186177	184186177	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	51	0	22	22	0	0	0
CLDN22	53842	bcgsc.ca	37	4	184240784	184240784	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	205	9	304	2	1	1	0	0	0
TRAPPC11	60684	bcgsc.ca	37	4	184618848	184618848	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	201	11	210	0	14	14	0	0	0
CASP3	836	bcgsc.ca	37	4	185550459	185550459	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	343	16	263	0	11	11	0	0	0
HELT	391723	ucsc.edu;bcgsc.ca	37	4	185940982	185940982	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	7	58	0	0	0	0	0	0
SNX25	83891	bcgsc.ca	37	4	186241954	186241954	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	185	11	134	0	11	11	0	0	0
ANKRD37	353322	ucsc.edu	37	4	186318447	186318447	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	75	0	0	0	0	0	0
UFSP2	55325	bcgsc.ca	37	4	186324681	186324681	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	93	7	82	0	36	36	0	0	0
CCDC110	256309	bcgsc.ca	37	4	186381277	186381277	+	Missense_Mutation	SNP	G	G	T	rs201566074	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	123	10	112	0	2	2	0	0	0
PDLIM3	27295	bcgsc.ca	37	4	186435488	186435488	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	152	9	134	0	1	1	0	0	0
TLR3	7098	bcgsc.ca	37	4	187004970	187004970	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	338	18	277	0	26	26	0	0	0
FAT1	2195	bcgsc.ca	37	4	187510247	187510247	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	308	13	406	1	228	227	0	0	1
FAT1	2195	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	187539870	187539870	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	37	79	0	75	30	45	0	0
FAT1	2195	bcgsc.ca	37	4	187630250	187630250	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	207	9	259	0	65	65	0	0	0
LRRC14B	389257	ucsc.edu;bcgsc.ca	37	5	195112	195112	+	Missense_Mutation	SNP	G	G	T	rs199834750	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	6	86	0	0	0	0	0	0
CEP72	55722	ucsc.edu	37	5	635552	635552	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	60	0	3	3	0	0	0
CLPTM1L	81037	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	1335258	1335258	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	88	32	197	1	84	46	38	0	0
SLC6A3	6531	ucsc.edu	37	5	1441601	1441601	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	75	0	0	0	0	0	0
KIAA0947	23379	bcgsc.ca	37	5	5462003	5462003	+	Silent	SNP	G	G	T	rs202086449	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	145	10	139	0	13	13	0	0	0
KIAA0947	23379	ucsc.edu	37	5	5486842	5486842	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	20	0	1	1	0	0	0
MTRR	4552	bcgsc.ca	37	5	7875376	7875376	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	194	9	195	0	0	0	0	0	0
CMBL	134147	ucsc.edu	37	5	10286609	10286609	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	59	0	0	0	0	0	0
CTNND2	1501	bcgsc.ca	37	5	11022935	11022935	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	122	9	141	0	0	0	0	0	0
CTNND2	1501	ucsc.edu	37	5	11384950	11384950	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	5	21	0	0	0	0	0	0
TRIO	7204	ucsc.edu;bcgsc.ca	37	5	14316675	14316675	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	6	69	0	17	17	0	0	0
MYO10	4651	ucsc.edu	37	5	16689972	16689972	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	80	0	21	21	0	0	0
UGT3A2	167127	ucsc.edu	37	5	36035935	36035935	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	67	0	0	0	0	0	0
EGFLAM	133584	ucsc.edu	37	5	38337684	38337684	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	18	4	23	0	0	0	0	0	0
TTC33	23548	bcgsc.ca	37	5	40730440	40730440	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	157	9	130	0	0	0	0	0	0
MROH2B	133558	ucsc.edu	37	5	41032844	41032844	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	38	0	0	0	0	0	0
OXCT1	5019	bcgsc.ca	37	5	41794106	41794106	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	224	14	177	0	0	0	0	0	0
NIM1	0	ucsc.edu	37	5	43280395	43280395	+	Missense_Mutation	SNP	C	C	A	rs201716824	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	6	93	1	0	0	0	0	0
CCL28	56477	bcgsc.ca	37	5	43382048	43382048	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	254	13	253	1	13	13	0	0	0
FST	10468	ucsc.edu	37	5	52779364	52779364	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	68	0	0	0	0	0	0
FST	10468	ucsc.edu	37	5	52779453	52779453	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	93	0	0	0	0	0	0
CDC20B	166979	bcgsc.ca	37	5	54416333	54416333	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	143	11	126	0	0	0	0	0	0
DHX29	54505	bcgsc.ca	37	5	54557237	54557237	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	199	11	149	0	15	15	0	0	0
ANKRD55	79722	bcgsc.ca	37	5	55439737	55439737	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	350	15	456	2	0	0	0	0	0
MIER3	166968	bcgsc.ca	37	5	56219612	56219612	+	Silent	SNP	C	C	A	rs200988018	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	179	10	176	1	6	6	0	0	0
PDE4D	5144	bcgsc.ca	37	5	59064087	59064087	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	247	12	302	0	0	0	0	0	0
ERCC8	1161	bcgsc.ca	37	5	60200626	60200626	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	276	14	130	0	0	0	0	0	0
C5orf64	285668	ucsc.edu	37	5	60999838	60999838	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	52	0	0	0	0	0	0
RGS7BP	401190	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	63905047	63905047	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	101	38	121	0	0	0	0	0	0
SREK1	140890	bcgsc.ca	37	5	65458333	65458333	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	205	10	165	0	19	19	0	0	0
CD180	4064	bcgsc.ca	37	5	66480335	66480335	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	150	10	132	0	0	0	0	0	0
PIK3R1	5295	bcgsc.ca	37	5	67588131	67588131	+	Missense_Mutation	SNP	G	G	T	rs142439210	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	231	12	188	0	16	16	0	0	0
BDP1	55814	bcgsc.ca	37	5	70840996	70840996	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	113	8	118	0	16	16	0	0	0
MAP1B	4131	bcgsc.ca	37	5	71491857	71491857	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	161	11	220	0	10	10	0	0	0
MAP1B	4131	ucsc.edu	37	5	71499572	71499572	+	Silent	SNP	C	C	A	rs201738576	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	45	0	16	16	0	0	0
HMGCR	3156	bcgsc.ca	37	5	74651197	74651197	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	186	13	192	1	1	1	0	0	0
HMGCR	3156	bcgsc.ca	37	5	74651235	74651235	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	175	8	193	1	35	35	0	0	0
SV2C	22987	bcgsc.ca	37	5	75581669	75581669	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	113	7	136	0	0	0	0	0	0
IQGAP2	10788	bcgsc.ca	37	5	75979003	75979003	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	148	12	120	0	1	1	0	0	0
IQGAP2	10788	ucsc.edu	37	5	75979628	75979628	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	73	7	76	0	2	2	0	0	0
BHMT	635	ucsc.edu	37	5	78423714	78423714	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	64	0	71	70	0	1	0
HOMER1	9456	bcgsc.ca	37	5	78734921	78734921	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	189	11	150	1	5	5	0	0	0
PAPD4	167153	bcgsc.ca	37	5	78919248	78919248	+	Missense_Mutation	SNP	C	C	A	rs148638193	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	159	10	157	0	11	11	0	0	0
CMYA5	202333	bcgsc.ca	37	5	79024832	79024832	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	218	11	229	1	0	0	0	0	0
CMYA5	202333	bcgsc.ca	37	5	79026404	79026404	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	271	15	345	0	2	2	0	0	0
CMYA5	202333	bcgsc.ca	37	5	79030995	79030995	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	115	9	148	0	3	3	0	0	0
THBS4	7060	ucsc.edu	37	5	79374038	79374038	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	6	32	0	0	0	0	0	0
FAM151B	167555	bcgsc.ca	37	5	79797673	79797673	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	237	12	221	2	0	0	0	0	0
RASGRF2	5924	bcgsc.ca	37	5	80408554	80408554	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	310	17	379	0	0	0	0	0	0
EDIL3	10085	ucsc.edu	37	5	83476276	83476276	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	58	1	56	56	0	0	0
ARRDC3	57561	bcgsc.ca	37	5	90669517	90669517	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	166	11	158	0	44	44	0	0	0
TTC37	9652	bcgsc.ca	37	5	94830477	94830477	+	Silent	SNP	C	C	A	rs147416417	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	207	9	174	1	40	40	0	0	0
ARSK	153642	bcgsc.ca	37	5	94901819	94901819	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	103	9	68	0	0	0	0	0	0
ARSK	153642	bcgsc.ca	37	5	94939196	94939196	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	81	8	38	0	10	10	0	0	0
CHD1	1105	bcgsc.ca	37	5	98223926	98223926	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	7	53	0	7	7	0	0	0
PAM	5066	bcgsc.ca	37	5	102360935	102360935	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	189	10	182	0	140	140	0	0	0
DCP2	167227	ucsc.edu	37	5	112328384	112328384	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	32	0	7	7	0	0	0
TSSK1B	83942	ucsc.edu	37	5	112769470	112769470	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	45	0	0	0	0	0	0
TSSK1B	83942	ucsc.edu	37	5	112770363	112770363	+	Silent	SNP	G	G	T	rs200678550		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	69	7	94	0	0	0	0	0	0
DTWD2	285605	bcgsc.ca	37	5	118183839	118183839	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	124	8	97	0	7	7	0	0	0
DMXL1	1657	bcgsc.ca	37	5	118525424	118525424	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	157	10	159	1	3	3	0	0	0
CEP120	153241	bcgsc.ca	37	5	122682411	122682411	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	268	14	293	1	5	5	0	0	0
PRRC1	133619	bcgsc.ca	37	5	126860426	126860426	+	Missense_Mutation	SNP	G	G	T	rs200497223	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	317	13	439	3	22	22	0	0	0
ISOC1	51015	bcgsc.ca	37	5	128441048	128441048	+	Silent	SNP	C	C	A	rs200248985	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	79	8	63	0	7	7	0	0	0
FNIP1	96459	ucsc.edu	37	5	131039758	131039758	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	47	0	0	0	0	0	0
ACSL6	23305	ucsc.edu	37	5	131325795	131325795	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	72	0	0	0	0	0	0
SHROOM1	134549	ucsc.edu	37	5	132159415	132159415	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	101	1	4	4	0	0	0
TCF7	6932	ucsc.edu	37	5	133478732	133478732	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	43	0	1	1	0	0	0
CDKL3	51265	ucsc.edu	37	5	133686005	133686005	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	18	0	1	1	0	0	0
SEC24A	10802	ucsc.edu	37	5	133984863	133984863	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	64	0	0	0	0	0	0
SEC24A	10802	bcgsc.ca	37	5	134044442	134044442	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	240	13	209	0	15	15	0	0	0
SPOCK1	6695	ucsc.edu	37	5	136476304	136476304	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	69	0	7	7	0	0	0
KLHL3	26249	bcgsc.ca	37	5	137013252	137013252	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	184	9	179	0	0	0	0	0	0
KDM3B	51780	ucsc.edu	37	5	137771354	137771354	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	36	0	63	63	0	0	0
SLC4A9	83697	ucsc.edu	37	5	139750721	139750721	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	26	0	0	0	0	0	0
SLC4A9	83697	ucsc.edu	37	5	139751887	139751887	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	47	0	0	0	0	0	0
PCDHA11	56138	bcgsc.ca	37	5	140248723	140248723	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	141	10	160	0	27	27	0	0	0
PCDHA13	56136	bcgsc.ca	37	5	140262846	140262846	+	Silent	SNP	G	G	T	rs148578758	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	173	11	161	0	0	0	0	0	0
PCDHB4	56131	hgsc.bcm.edu;bcgsc.ca	37	5	140502471	140502471	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	275	14	239	0	8	8	0	0	0
PCDHB6	56130	bcgsc.ca	37	5	140530410	140530410	+	Missense_Mutation	SNP	C	C	A	rs141374326	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	136	8	218	0	5	4	0	0	1
PCDHB16	57717	ucsc.edu	37	5	140562453	140562453	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	58	0	23	23	0	0	0
PCDHB15	56121	ucsc.edu	37	5	140625728	140625728	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	76	0	4	4	0	0	0
TAF7	6879	bcgsc.ca	37	5	140699497	140699497	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	156	11	127	0	56	56	0	0	0
PCDHGA4	56111	ucsc.edu	37	5	140735534	140735534	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	5	50	0	0	0	0	0	0
PCDHGC4	56098	bcgsc.ca	37	5	140865198	140865198	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	93	7	138	0	0	0	0	0	0
DIAPH1	1729	ucsc.edu	37	5	140896569	140896569	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	47	0	0	0	0	0	0
DIAPH1	1729	ucsc.edu	37	5	140966762	140966762	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	39	0	0	0	0	0	0
HDAC3	8841	ucsc.edu	37	5	141008783	141008783	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	6	104	0	26	26	0	0	0
ARAP3	64411	ucsc.edu	37	5	141051164	141051164	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	81	0	0	0	0	0	0
ARAP3	64411	ucsc.edu	37	5	141052172	141052172	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	60	0	0	0	0	0	0
NDFIP1	80762	bcgsc.ca	37	5	141511902	141511902	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	227	12	209	2	0	0	0	0	0
NDFIP1	80762	bcgsc.ca	37	5	141515314	141515314	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	214	12	145	0	156	156	0	0	0
SPRY4	81848	ucsc.edu	37	5	141693894	141693894	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	62	0	0	0	0	0	0
FGF1	2246	bcgsc.ca	37	5	141980318	141980318	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	180	14	179	0	0	0	0	0	0
POU4F3	5459	ucsc.edu	37	5	145718681	145718681	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	59	0	0	0	0	0	0
TCERG1	10915	bcgsc.ca	37	5	145849106	145849106	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	240	12	234	1	0	0	0	0	0
ABLIM3	22885	ucsc.edu	37	5	148586578	148586578	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	62	0	0	0	0	0	0
AFAP1L1	134265	bcgsc.ca	37	5	148680717	148680717	+	Missense_Mutation	SNP	G	G	T	rs61734415	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	125	8	138	1	3	3	0	0	0
SLC26A2	1836	ucsc.edu;bcgsc.ca	37	5	149361235	149361235	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	78	9	105	0	0	0	0	0	0
PDGFRB	5159	bcgsc.ca	37	5	149510153	149510153	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	118	7	236	2	1	1	0	0	0
PDGFRB	5159	bcgsc.ca	37	5	149513156	149513156	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	311	13	492	1	0	0	0	0	0
CAMK2A	815	ucsc.edu	37	5	149644565	149644565	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	97	0	0	0	0	0	0
ZNF300P1	134466	ucsc.edu	37	5	150310688	150310688	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	25	0	10	10	0	0	0
GM2A	2760	ucsc.edu	37	5	150632816	150632816	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	7	149	0	45	45	0	0	0
GM2A	2760	ucsc.edu	37	5	150647057	150647057	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	43	0	42	42	0	0	0
SLC36A3	285641	ucsc.edu	37	5	150675822	150675822	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	55	0	0	0	0	0	0
NMUR2	56923	bcgsc.ca	37	5	151771985	151771985	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	171	11	198	2	0	0	0	0	0
CYFIP2	26999	ucsc.edu	37	5	156734783	156734783	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	28	0	72	72	0	0	0
ADAM19	8728	bcgsc.ca	37	5	156964953	156964953	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	190	12	155	0	0	0	0	0	0
EBF1	1879	ucsc.edu	37	5	158135117	158135117	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	13	0	0	0	0	0	0
EBF1	1879	ucsc.edu	37	5	158139283	158139283	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	28	0	0	0	0	0	0
HMMR	3161	bcgsc.ca	37	5	162918135	162918135	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	220	11	129	0	0	0	0	0	0
WWC1	23286	ucsc.edu	37	5	167868817	167868817	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	5	49	0	199	199	0	0	0
PANK3	79646	bcgsc.ca	37	5	167995886	167995886	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	105	8	102	0	3	3	0	0	0
SLIT3	6586	ucsc.edu	37	5	168096968	168096968	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	6	85	0	0	0	0	0	0
DOCK2	1794	bcgsc.ca	37	5	169445988	169445988	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	316	14	365	1	2	2	0	0	0
GABRP	2568	bcgsc.ca	37	5	170222318	170222318	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	153	10	230	0	0	0	0	0	0
UBTD2	92181	bcgsc.ca	37	5	171661131	171661131	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	203	12	160	0	0	0	0	0	0
CPEB4	80315	ucsc.edu	37	5	173317861	173317861	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	65	2	0	0	0	0	0
UIMC1	51720	bcgsc.ca	37	5	176332409	176332409	+	Silent	SNP	G	G	T	rs147884049	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	147	9	133	0	18	17	0	1	0
NSD1	64324	bcgsc.ca	37	5	176710893	176710893	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	188	10	184	1	18	18	0	0	0
RAB24	53917	ucsc.edu	37	5	176728800	176728800	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	137	0	0	0	0	0	0
LMAN2	10960	ucsc.edu	37	5	176764373	176764373	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	49	0	0	0	0	0	0
RGS14	10636	ucsc.edu	37	5	176795210	176795210	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	97	0	10	10	0	0	0
RGS14	10636	bcgsc.ca	37	5	176798538	176798538	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	156	11	295	1	33	33	0	0	0
GRK6	2870	ucsc.edu;bcgsc.ca	37	5	176863231	176863231	+	Silent	SNP	C	C	A	rs55993843	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	81	9	123	2	20	20	0	0	0
DOK3	79930	ucsc.edu	37	5	176936814	176936814	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	76	0	1	1	0	0	0
FAM193B	54540	ucsc.edu	37	5	176966053	176966053	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	56	0	17	17	0	0	0
AGXT2L2	85007	ucsc.edu	37	5	177651458	177651458	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	65	0	2	2	0	0	0
GRM6	2916	ucsc.edu	37	5	178419052	178419052	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	43	0	0	0	0	0	0
RUFY1	80230	bcgsc.ca	37	5	178996334	178996334	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	223	12	243	0	48	48	0	0	0
MAML1	9794	ucsc.edu	37	5	179193451	179193451	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	90	0	19	19	0	0	0
MAML1	9794	ucsc.edu;bcgsc.ca	37	5	179201685	179201685	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	5	74	0	13	13	0	0	0
BTNL8	79908	bcgsc.ca	37	5	180335744	180335744	+	Missense_Mutation	SNP	G	G	T	rs139672035	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	256	12	369	2	0	0	0	0	0
EXOC2	55770	bcgsc.ca	37	6	598890	598890	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	155	11	128	1	5	5	0	0	0
C6orf195	154386	ucsc.edu	37	6	2623939	2623939	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	96	0	0	0	0	0	0
C6orf195	154386	ucsc.edu	37	6	2624046	2624046	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	94	0	0	0	0	0	0
SERPINB6	5269	ucsc.edu	37	6	2959510	2959510	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	148	0	1	1	0	0	0
SLC22A23	63027	ucsc.edu	37	6	3324169	3324169	+	Silent	SNP	C	C	A	rs147931320	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	72	0	0	0	0	0	0
ECI2	10455	ucsc.edu	37	6	4126416	4126416	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	95	0	34	34	0	0	0
LY86	9450	ucsc.edu	37	6	6588958	6588958	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	139	0	0	0	0	0	0
TXNDC5	81567	ucsc.edu	37	6	7904884	7904884	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	5	104	0	63	63	0	0	0
PIP5K1P1	206426	ucsc.edu	37	6	7987449	7987449	+	RNA	SNP	G	G	T	rs111944375	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	100	0	4	4	0	0	0
SLC35B3	51000	bcgsc.ca	37	6	8420993	8420993	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	100	9	185	0	34	34	0	0	0
SYCP2L	221711	ucsc.edu	37	6	10902996	10902996	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	41	0	0	0	0	0	0
SYCP2L	221711	ucsc.edu	37	6	10942740	10942740	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	44	0	1	1	0	0	0
SYCP2L	221711	ucsc.edu	37	6	10956424	10956424	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	49	0	0	0	0	0	0
HIVEP1	3096	ucsc.edu	37	6	12121442	12121442	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	6	109	0	2	2	0	0	0
GFOD1	54438	ucsc.edu	37	6	13486931	13486931	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	121	0	1	1	0	0	0
RANBP9	10048	bcgsc.ca	37	6	13644861	13644861	+	Missense_Mutation	SNP	C	C	A	rs201882272	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	73	6	128	0	15	15	0	0	0
RBM24	221662	bcgsc.ca	37	6	17292029	17292029	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	122	8	319	3	0	0	0	0	0
CAP2	10486	ucsc.edu	37	6	17539670	17539670	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	5	59	0	5	5	0	0	0
KIF13A	63971	ucsc.edu	37	6	17764482	17764482	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	77	0	8	8	0	0	0
KIF13A	63971	ucsc.edu	37	6	17817357	17817357	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	103	0	5	5	0	0	0
RNF144B	255488	ucsc.edu	37	6	18439931	18439931	+	Missense_Mutation	SNP	C	C	A	rs202133156	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	79	0	9	9	0	0	0
HDGFL1	154150	ucsc.edu	37	6	22569970	22569970	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	75	0	0	0	0	0	0
LRRC16A	55604	ucsc.edu	37	6	25594694	25594694	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	72	7	110	0	9	9	0	0	0
SLC17A4	10050	ucsc.edu	37	6	25773862	25773862	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	92	0	0	0	0	0	0
SLC17A2	10246	ucsc.edu	37	6	25921418	25921418	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	106	1	0	0	0	0	0
HIST1H4C	8364	ucsc.edu	37	6	26104397	26104397	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	97	0	0	0	0	0	0
HIST1H1T	3010	ucsc.edu	37	6	26107962	26107962	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	6	136	0	0	0	0	0	0
HIST1H4I	8294	ucsc.edu	37	6	27107121	27107121	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	96	0	0	0	0	0	0
ZSCAN9	7746	ucsc.edu	37	6	28195000	28195000	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	81	0	10	10	0	0	0
ZSCAN23	222696	ucsc.edu	37	6	28403732	28403732	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	97	0	0	0	0	0	0
ZNF311	282890	ucsc.edu	37	6	28963218	28963218	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	110	0	1	1	0	0	0
OR12D3	81797	ucsc.edu	37	6	29342750	29342750	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	6	71	0	0	0	0	0	0
OR11A1	26531	ucsc.edu	37	6	29395266	29395266	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	109	1	0	0	0	0	0
GABBR1	2550	ucsc.edu	37	6	29576464	29576464	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	101	0	8	8	0	0	0
MOG	4340	bcgsc.ca	37	6	29627132	29627132	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	122	8	322	0	0	0	0	0	0
HLA-G	3135	ucsc.edu	37	6	29797394	29797394	+	Silent	SNP	G	G	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	1	191	0	3352	379	2943	21	6
HLA-J	3137	ucsc.edu	37	6	29976072	29976072	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	66	0	4	4	0	0	0
HLA-J	3137	ucsc.edu	37	6	29976436	29976436	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	131	0	9	9	0	0	0
TRIM39	56658	ucsc.edu	37	6	30310029	30310029	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	85	0	4	4	0	0	0
ABCF1	23	ucsc.edu	37	6	30553925	30553925	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	108	0	17	17	0	0	0
MDC1	9656	bcgsc.ca	37	6	30670548	30670548	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	82	7	213	1	11	11	0	0	0
MDC1	9656	ucsc.edu	37	6	30679962	30679962	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	72	0	2	2	0	0	0
DDR1	780	ucsc.edu	37	6	30862336	30862336	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	138	0	190	190	0	0	0
VARS2	57176	ucsc.edu	37	6	30887866	30887866	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	112	0	0	0	0	0	0
PRRC2A	7916	ucsc.edu	37	6	31593087	31593087	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	127	0	0	0	0	0	0
CSNK2B	1460	ucsc.edu	37	6	31637206	31637206	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	5	151	0	88	88	0	0	0
LY6G5B	58496	ucsc.edu	37	6	31639893	31639893	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	5	93	1	3	3	0	0	0
VWA7	80737	ucsc.edu	37	6	31734504	31734504	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	98	0	9	9	0	0	0
EHMT2	10919	ucsc.edu;bcgsc.ca	37	6	31852289	31852289	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	8	237	0	13	13	0	0	0
EHMT2	10919	ucsc.edu	37	6	31856524	31856524	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	63	0	0	0	0	0	0
C2	717	ucsc.edu	37	6	31911718	31911718	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	106	0	5	5	0	0	0
SKIV2L	6499	ucsc.edu	37	6	31933671	31933671	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	77	0	16	16	0	0	0
SKIV2L	6499	ucsc.edu;bcgsc.ca	37	6	31936248	31936248	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	5	96	1	8	8	0	0	0
TNXB	7148	ucsc.edu	37	6	32050052	32050052	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	135	0	0	0	0	0	0
TNXB	7148	ucsc.edu	37	6	32063764	32063764	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	98	0	0	0	0	0	0
TNXB	7148	ucsc.edu	37	6	32065776	32065776	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	15	4	64	0	0	0	0	0	0
ATF6B	1388	ucsc.edu	37	6	32084820	32084820	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	82	0	0	0	0	0	0
ATF6B	1388	ucsc.edu	37	6	32086593	32086593	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	5	104	0	18	18	0	0	0
AGER	177	ucsc.edu	37	6	32150739	32150739	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	127	0	2	2	0	0	0
HLA-DQB2	3120	ucsc.edu	37	6	32726631	32726631	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	73	0	0	0	0	0	0
TAP2	6891	ucsc.edu	37	6	32805576	32805576	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	104	0	12	12	0	0	0
TAP1	6890	ucsc.edu	37	6	32819974	32819974	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	130	0	53	53	0	0	0
COL11A2	1302	ucsc.edu	37	6	33136767	33136767	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	189	0	0	0	0	0	0
COL11A2	1302	ucsc.edu	37	6	33140357	33140357	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	149	0	1	1	0	0	0
RXRB	6257	ucsc.edu	37	6	33163689	33163689	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	6	91	0	0	0	0	0	0
SLC39A7	7922	ucsc.edu	37	6	33171388	33171388	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	131	0	52	52	0	0	0
ZBTB22	9278	ucsc.edu	37	6	33284178	33284178	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	123	0	5	5	0	0	0
KIFC1	3833	ucsc.edu	37	6	33373182	33373182	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	101	0	0	0	0	0	0
SYNGAP1	8831	bcgsc.ca	37	6	33391261	33391261	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	118	9	365	1	0	0	0	0	0
ZBTB9	221504	bcgsc.ca	37	6	33423047	33423047	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	101	8	308	0	2	2	0	0	0
IP6K3	117283	ucsc.edu	37	6	33690736	33690736	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	5	125	0	0	0	0	0	0
SCUBE3	222663	bcgsc.ca	37	6	35207555	35207555	+	Missense_Mutation	SNP	G	G	T	rs185104039	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	93	9	179	2	1	1	0	0	0
PNPLA1	285848	ucsc.edu	37	6	36259267	36259267	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	4	68	0	0	0	0	0	0
CPNE5	57699	ucsc.edu	37	6	36730756	36730756	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	142	0	0	0	0	0	0
FGD2	221472	ucsc.edu	37	6	36995316	36995316	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	126	0	5	5	0	0	0
TBC1D22B	55633	ucsc.edu	37	6	37247377	37247377	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	6	91	0	0	0	0	0	0
DNAH8	1769	ucsc.edu	37	6	38882976	38882976	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	76	1	0	0	0	0	0
GLP1R	2740	ucsc.edu	37	6	39041473	39041473	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	70	7	186	1	0	0	0	0	0
SAYSD1	55776	bcgsc.ca	37	6	39073351	39073351	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	109	8	323	0	9	9	0	0	0
KIF6	221458	ucsc.edu	37	6	39304325	39304325	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	114	0	0	0	0	0	0
DAAM2	23500	ucsc.edu	37	6	39869759	39869759	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	100	0	1	1	0	0	0
MOCS1	4337	ucsc.edu	37	6	39893472	39893472	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	6	101	0	10	10	0	0	0
UNC5CL	222643	ucsc.edu	37	6	41002762	41002762	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	106	1	28	28	0	0	0
NFYA	4800	ucsc.edu	37	6	41051903	41051903	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	60	0	5	5	0	0	0
TREML1	340205	ucsc.edu	37	6	41121550	41121550	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	137	0	0	0	0	0	0
TREML2	79865	ucsc.edu	37	6	41160208	41160208	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	47	0	0	0	0	0	0
TREML4	285852	ucsc.edu	37	6	41196716	41196716	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	118	0	0	0	0	0	0
PGC	5225	ucsc.edu	37	6	41704665	41704665	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	163	0	0	0	0	0	0
PGC	5225	ucsc.edu	37	6	41705547	41705547	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	82	0	0	0	0	0	0
FRS3	10817	ucsc.edu	37	6	41738787	41738787	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	98	0	1	1	0	0	0
TRERF1	55809	ucsc.edu	37	6	42203946	42203946	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	5	68	0	0	0	0	0	0
TRERF1	55809	bcgsc.ca	37	6	42235911	42235911	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	6	97	0	0	0	0	0	0
PRPH2	5961	bcgsc.ca	37	6	42689558	42689558	+	Missense_Mutation	SNP	C	C	A	rs61755793	bycluster;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	101	7	233	0	0	0	0	0	0
GLTSCR1L	23506	bcgsc.ca	37	6	42830320	42830320	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	119	7	194	0	1	1	0	0	0
PEX6	5190	bcgsc.ca	37	6	42934521	42934521	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	138	11	462	0	0	0	0	0	0
PPP2R5D	5528	ucsc.edu	37	6	42976839	42976839	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	149	0	10	10	0	0	0
PPP2R5D	5528	ucsc.edu	37	6	42978205	42978205	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	86	0	0	0	0	0	0
KLHDC3	116138	bcgsc.ca	37	6	42985614	42985614	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	86	8	287	0	27	27	0	0	0
CUL7	9820	ucsc.edu	37	6	43020223	43020223	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	121	0	5	5	0	0	0
CUL9	23113	ucsc.edu	37	6	43153860	43153860	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	97	0	7	7	0	0	0
CUL9	23113	ucsc.edu	37	6	43154185	43154185	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	86	1	0	0	0	0	0
CUL9	23113	bcgsc.ca	37	6	43155045	43155045	+	Silent	SNP	C	C	A	rs61739541	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	97	8	222	0	6	6	0	0	0
SLC22A7	10864	ucsc.edu	37	6	43267635	43267635	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	121	0	0	0	0	0	0
ZNF318	24149	bcgsc.ca	37	6	43323485	43323485	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	220	11	574	0	4	4	0	0	0
ZNF318	24149	ucsc.edu	37	6	43323848	43323848	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	107	0	1	1	0	0	0
ABCC10	89845	ucsc.edu	37	6	43400110	43400110	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	113	0	0	0	0	0	0
ABCC10	89845	ucsc.edu	37	6	43411905	43411905	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	52	0	0	0	0	0	0
ABCC10	89845	ucsc.edu	37	6	43417679	43417679	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	96	0	1	1	0	0	0
C6orf223	221416	ucsc.edu;bcgsc.ca	37	6	43970751	43970751	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	6	109	1	0	0	0	0	0
TMEM63B	55362	ucsc.edu	37	6	44122133	44122133	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	145	0	24	24	0	0	0
AARS2	57505	ucsc.edu	37	6	44270544	44270544	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	15	4	47	0	0	0	0	0	0
CDC5L	988	ucsc.edu	37	6	44392246	44392246	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	77	0	11	11	0	0	0
SLC25A27	9481	ucsc.edu	37	6	46623590	46623590	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	53	5	134	1	0	0	0	0	0
TDRD6	221400	ucsc.edu	37	6	46658325	46658325	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	6	103	0	0	0	0	0	0
TFAP2B	7021	ucsc.edu	37	6	50803965	50803965	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	71	0	0	0	0	0	0
PKHD1	5314	ucsc.edu	37	6	51701202	51701202	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	76	0	0	0	0	0	0
PKHD1	5314	ucsc.edu	37	6	51887605	51887605	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	110	0	0	0	0	0	0
PKHD1	5314	ucsc.edu	37	6	51921718	51921718	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	63	1	12	12	0	0	0
GSTA3	2940	ucsc.edu	37	6	52764854	52764854	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	121	0	0	0	0	0	0
TINAG	27283	bcgsc.ca	37	6	54219372	54219372	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	129	9	99	0	4	4	0	0	0
FAM83B	222584	bcgsc.ca	37	6	54805957	54805957	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	121	10	125	2	1	1	0	0	0
GFRAL	389400	bcgsc.ca	37	6	55216059	55216059	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	304	14	268	1	0	0	0	0	0
DST	667	hgsc.bcm.edu	37	6	56391227	56391227	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	179	10	188	1	40	40	0	0	0
DST	667	ucsc.edu	37	6	56438654	56438654	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	67	7	49	0	12	12	0	0	0
BEND6	221336	ucsc.edu	37	6	56819249	56819249	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	5	53	0	0	0	0	0	0
BEND6	221336	ucsc.edu	37	6	56819252	56819252	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	53	0	0	0	0	0	0
EYS	346007	bcgsc.ca	37	6	66205151	66205151	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	197	11	153	2	0	0	0	0	0
COL19A1	1310	ucsc.edu	37	6	70851940	70851940	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	45	0	0	0	0	0	0
COL19A1	1310	ucsc.edu	37	6	70866589	70866589	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	34	0	0	0	0	0	0
COL9A1	1297	ucsc.edu	37	6	70926605	70926605	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	46	0	0	0	0	0	0
COL9A1	1297	ucsc.edu	37	6	70970387	70970387	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	44	0	0	0	0	0	0
SENP6	26054	ucsc.edu;bcgsc.ca	37	6	76419344	76419344	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	70	8	42	0	0	0	0	0	0
HMGN3	9324	bcgsc.ca	37	6	79918264	79918264	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	333	13	282	0	0	0	0	0	0
TTK	7272	bcgsc.ca	37	6	80723018	80723018	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	266	13	213	0	0	0	0	0	0
UBE3D	90025	bcgsc.ca	37	6	83754340	83754340	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	281	15	312	1	5	5	0	0	0
SNAP91	9892	ucsc.edu	37	6	84302176	84302176	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	31	0	0	0	0	0	0
SNX14	57231	ucsc.edu	37	6	86275060	86275060	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	32	0	0	0	0	0	0
SNX14	57231	bcgsc.ca	37	6	86282016	86282016	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	270	14	173	1	0	0	0	0	0
ZNF292	23036	ucsc.edu	37	6	87928403	87928403	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	18	0	4	4	0	0	0
ZNF292	23036	bcgsc.ca	37	6	87943198	87943198	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	358	23	209	1	9	9	0	0	0
ZNF292	23036	bcgsc.ca	37	6	87969676	87969676	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	158	12	134	1	14	14	0	0	0
ZNF292	23036	ucsc.edu	37	6	87970633	87970633	+	Missense_Mutation	SNP	G	G	T	rs61747660	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	5	25	0	15	15	0	0	0
SPACA1	81833	ucsc.edu	37	6	88767335	88767335	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	28	0	0	0	0	0	0
PNRC1	10957	ucsc.edu	37	6	89793471	89793471	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	7	33	0	0	0	0	0	0
PM20D2	135293	bcgsc.ca	37	6	89864506	89864506	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	198	12	168	0	36	36	0	0	0
CASP8AP2	9994	bcgsc.ca	37	6	90577199	90577199	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	147	8	124	1	2	2	0	0	0
MIR548H3	100302287	bcgsc.ca	37	6	97575360	97575360	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	241	13	193	0	0	0	0	0	0
PRDM13	59336	ucsc.edu	37	6	100056668	100056668	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	70	0	0	0	0	0	0
PRDM13	59336	ucsc.edu	37	6	100057101	100057101	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	46	0	0	0	0	0	0
PRDM1	639	ucsc.edu	37	6	106553267	106553267	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	6	127	0	0	0	0	0	0
AIM1	202	bcgsc.ca	37	6	106999808	106999808	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	319	15	245	0	13	13	0	0	0
SEC63	11231	bcgsc.ca	37	6	108234612	108234612	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	361	16	290	0	24	24	0	0	0
SNX3	8724	ucsc.edu	37	6	108535807	108535807	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	44	0	215	215	0	0	0
ARMC2	84071	bcgsc.ca	37	6	109190145	109190145	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	98	8	96	0	1	1	0	0	0
ARMC2	84071	ucsc.edu	37	6	109285499	109285499	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	63	0	0	0	0	0	0
LAMA4	3910	ucsc.edu	37	6	112575126	112575126	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	15	4	28	0	1	1	0	0	0
TSPYL1	7259	ucsc.edu	37	6	116600780	116600780	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	102	0	19	19	0	0	0
DSE	29940	ucsc.edu	37	6	116757272	116757272	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	72	0	5	5	0	0	0
GPRC6A	222545	ucsc.edu	37	6	117113842	117113842	+	Silent	SNP	G	G	T	rs150641887	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	53	0	0	0	0	0	0
SLC35F1	222553	bcgsc.ca	37	6	118588218	118588218	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	373	14	490	0	0	0	0	0	0
C6orf170	221322	bcgsc.ca	37	6	121434270	121434270	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	279	14	188	0	4	4	0	0	0
PKIB	5570	bcgsc.ca	37	6	123039104	123039104	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	119	9	152	0	0	0	0	0	0
CLVS2	134829	bcgsc.ca	37	6	123369838	123369838	+	Silent	SNP	C	C	A	rs144381752	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	328	12	274	1	0	0	0	0	0
PTPRK	5796	bcgsc.ca	37	6	128718724	128718724	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	258	12	290	0	36	35	1	0	0
ENPP1	5167	bcgsc.ca	37	6	132194174	132194174	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	318	14	287	0	1	1	0	0	0
TAAR6	319100	bcgsc.ca	37	6	132891547	132891547	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	111	9	149	0	0	0	0	0	0
TAAR6	319100	bcgsc.ca	37	6	132891895	132891895	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	367	14	478	0	0	0	0	0	0
EYA4	2070	bcgsc.ca	37	6	133849880	133849880	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	349	15	372	0	0	0	0	0	0
MYB	4602	bcgsc.ca	37	6	135510956	135510956	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	201	10	168	0	0	0	0	0	0
AHI1	54806	bcgsc.ca	37	6	135679270	135679270	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	491	19	347	1	0	0	0	0	0
ECT2L	345930	bcgsc.ca	37	6	139167797	139167797	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	471	19	364	0	0	0	0	0	0
FUCA2	2519	ucsc.edu;bcgsc.ca	37	6	143823700	143823700	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	89	9	117	1	2	2	0	0	0
UTRN	7402	bcgsc.ca	37	6	145051532	145051532	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	273	13	278	1	18	18	0	0	0
UTRN	7402	bcgsc.ca	37	6	145093066	145093066	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	200	13	117	1	53	53	0	0	0
TAB2	23118	bcgsc.ca	37	6	149730786	149730786	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	224	10	219	0	28	28	0	0	0
ULBP1	80329	ucsc.edu	37	6	150285265	150285265	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	78	0	0	0	0	0	0
PLEKHG1	57480	hgsc.bcm.edu;broad.mit.edu	37	6	151152656	151152656	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	127	60	158	0	0	0	0	0	0
AKAP12	9590	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	151626981	151626981	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	13	48	0	21	12	9	0	0
ESR1	2099	ucsc.edu	37	6	152419955	152419955	+	Missense_Mutation	SNP	C	C	A	rs182943916	by1000genomes;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	81	0	1	1	0	0	0
SYNE1	23345	bcgsc.ca	37	6	152792773	152792773	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	233	10	199	0	2	2	0	0	0
FBXO5	26271	bcgsc.ca	37	6	153296352	153296352	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	142	9	115	0	9	9	0	0	0
MTRF1L	54516	ucsc.edu	37	6	153316295	153316295	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	6	43	0	20	20	0	0	0
SCAF8	22828	bcgsc.ca	37	6	155153546	155153546	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	214	11	370	1	23	23	0	0	0
TIAM2	26230	ucsc.edu	37	6	155450511	155450511	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	56	0	1	1	0	0	0
TIAM2	26230	bcgsc.ca	37	6	155485631	155485631	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	143	11	254	1	1	1	0	0	0
ARID1B	57492	bcgsc.ca	37	6	157528337	157528337	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	127	9	158	0	18	18	0	0	0
SNX9	51429	ucsc.edu	37	6	158357058	158357058	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	22	0	0	0	0	0	0
FNDC1	84624	bcgsc.ca	37	6	159682294	159682294	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	147	11	102	0	0	0	0	0	0
LOC729603	0	ucsc.edu	37	6	160514658	160514658	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	5	74	0	1	1	0	0	0
LPAL2	80350	bcgsc.ca	37	6	160921832	160921832	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	356	18	472	0	0	0	0	0	0
LPA	4018	bcgsc.ca	37	6	161016418	161016418	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	219	14	220	1	0	0	0	0	0
RPS6KA2	6196	ucsc.edu	37	6	166873002	166873002	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	47	0	27	27	0	0	0
RNASET2	8635	bcgsc.ca	37	6	167343199	167343199	+	Silent	SNP	C	C	A	rs35517174	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	202	11	333	1	398	397	1	0	0
MLLT4	4301	ucsc.edu	37	6	168294586	168294586	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	18	0	0	0	0	0	0
THBS2	7058	bcgsc.ca	37	6	169648761	169648761	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	96	7	123	0	4	4	0	0	0
TCTE3	6991	bcgsc.ca	37	6	170151508	170151508	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	97	8	202	0	2	2	0	0	0
HEATR2	54919	ucsc.edu	37	7	810251	810251	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	89	0	0	0	0	0	0
INTS1	26173	bcgsc.ca	37	7	1542710	1542710	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	80	7	145	0	9	9	0	0	0
BRAT1	221927	ucsc.edu	37	7	2578028	2578028	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	104	0	15	15	0	0	0
SLC29A4	222962	ucsc.edu	37	7	5330831	5330831	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	78	0	2	2	0	0	0
TNRC18	84629	ucsc.edu	37	7	5396835	5396835	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	29	0	47	47	0	0	0
PMS2	5395	ucsc.edu	37	7	6037000	6037000	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	6	57	0	9	9	0	0	0
EIF2AK1	27102	bcgsc.ca	37	7	6080594	6080594	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	168	10	239	0	103	103	0	0	0
COL28A1	340267	ucsc.edu	37	7	7530259	7530259	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	48	0	0	0	0	0	0
THSD7A	221981	ucsc.edu	37	7	11486945	11486945	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	33	0	6	6	0	0	0
SCIN	85477	ucsc.edu	37	7	12675744	12675744	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	31	0	164	164	0	0	0
SNX13	23161	ucsc.edu	37	7	17889973	17889973	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	29	0	0	0	0	0	0
RPL23P8	222901	ucsc.edu	37	7	20867082	20867082	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	88	0	1103	1103	0	0	0
DNAH11	8701	ucsc.edu	37	7	21598467	21598467	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	28	0	0	0	0	0	0
DNAH11	8701	ucsc.edu	37	7	21600753	21600753	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	5	19	0	0	0	0	0	0
DNAH11	8701	ucsc.edu	37	7	21901627	21901627	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	48	0	0	0	0	0	0
DNAH11	8701	bcgsc.ca	37	7	21938980	21938980	+	Missense_Mutation	SNP	G	G	T	rs113653972	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	204	11	274	0	0	0	0	0	0
OSBPL3	26031	bcgsc.ca	37	7	24874242	24874242	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	122	9	145	0	2	2	0	0	0
CPVL	54504	ucsc.edu	37	7	29132239	29132239	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	7	36	1	0	0	0	0	0
WIPF3	644150	ucsc.edu	37	7	29927727	29927727	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	68	0	4	4	0	0	0
FAM188B	84182	ucsc.edu	37	7	30893073	30893073	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	25	0	1	1	0	0	0
INMT-FAM188B	100526825	ucsc.edu	37	7	30898827	30898827	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	65	0	0	0	0	0	0
FKBP9	11328	ucsc.edu	37	7	33042378	33042378	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	6	57	0	100	100	0	0	0
RP9	6100	bcgsc.ca	37	7	33136943	33136943	+	Silent	SNP	C	C	A	rs148957070	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	113	8	101	0	14	14	0	0	0
SFRP4	6424	bcgsc.ca	37	7	37947206	37947206	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	109	9	153	0	3	3	0	0	0
AMPH	273	ucsc.edu;bcgsc.ca	37	7	38431349	38431349	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	73	9	86	0	0	0	0	0	0
INHBA	3624	ucsc.edu	37	7	41729760	41729760	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	62	0	4	4	0	0	0
INHBA	3624	bcgsc.ca	37	7	41739736	41739736	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	546	23	814	2	2	2	0	0	0
POLR2J4	84820	ucsc.edu	37	7	44012841	44012841	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	50	1	6	6	0	0	0
PGAM2	5224	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	44105125	44105125	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	107	38	136	0	2	2	0	0	0
AEBP1	165	ucsc.edu	37	7	44147650	44147650	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	16	4	21	0	146	146	0	0	0
NPC1L1	29881	bcgsc.ca	37	7	44556893	44556893	+	Missense_Mutation	SNP	C	C	A	rs115395682	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	148	12	177	1	0	0	0	0	0
TMED4	222068	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	44621125	44621125	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	76	41	85	0	144	79	65	0	0
OGDH	4967	bcgsc.ca	37	7	44664055	44664055	+	Missense_Mutation	SNP	G	G	T	rs148704374	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	257	13	272	0	29	29	0	0	0
MYO1G	64005	ucsc.edu	37	7	45016628	45016628	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	84	0	2	2	0	0	0
ADCY1	107	ucsc.edu;bcgsc.ca	37	7	45750242	45750242	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	6	53	0	0	0	0	0	0
PKD1L1	168507	ucsc.edu;bcgsc.ca	37	7	47897400	47897400	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	88	10	100	0	1	1	0	0	0
PKD1L1	168507	ucsc.edu	37	7	47917178	47917178	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	5	91	0	0	0	0	0	0
ABCA13	154664	bcgsc.ca	37	7	48349626	48349626	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	202	13	252	0	1	1	0	0	0
FIGNL1	63979	bcgsc.ca	37	7	50513309	50513309	+	Missense_Mutation	SNP	C	C	A	rs144606954	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	160	12	156	0	7	7	0	0	0
GRB10	2887	bcgsc.ca	37	7	50694533	50694533	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	167	10	271	0	0	0	0	0	0
CCT6A	908	bcgsc.ca	37	7	56122125	56122125	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	174	14	192	0	85	85	0	0	0
PHKG1	5260	ucsc.edu	37	7	56156628	56156628	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	84	0	2	2	0	0	0
ERV3-1	2086	ucsc.edu	37	7	64453327	64453327	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	74	0	7	7	0	0	0
CCT6P1	643253	bcgsc.ca	37	7	65220971	65220971	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	7	38	0	0	0	0	0	0
TMEM248	55069	bcgsc.ca	37	7	66418350	66418350	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	239	11	248	0	1	1	0	0	0
STAG3L4	64940	ucsc.edu	37	7	66767734	66767734	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	35	0	6	6	0	0	0
AUTS2	26053	ucsc.edu	37	7	70228063	70228063	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	115	0	9	9	0	0	0
WBSCR17	64409	bcgsc.ca	37	7	70885929	70885929	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	231	11	343	0	24	24	0	0	0
WBSCR17	64409	bcgsc.ca	37	7	71135089	71135089	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	279	14	330	1	0	0	0	0	0
MLXIPL	51085	ucsc.edu	37	7	73012039	73012039	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	56	0	0	0	0	0	0
WBSCR22	114049	ucsc.edu;bcgsc.ca	37	7	73112161	73112161	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	9	113	0	0	0	0	0	0
POR	5447	ucsc.edu	37	7	75613141	75613141	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	35	0	94	94	0	0	0
SRCRB4D	136853	ucsc.edu	37	7	76019590	76019590	+	Missense_Mutation	SNP	C	C	A	rs10227141	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	57	0	1	1	0	0	0
DTX2	113878	ucsc.edu	37	7	76131680	76131680	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	49	1	2	2	0	0	0
PTPN12	5782	bcgsc.ca	37	7	77267951	77267951	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	219	10	168	0	0	0	0	0	0
SEMA3C	10512	bcgsc.ca	37	7	80394556	80394556	+	Missense_Mutation	SNP	C	C	A	rs149429389	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	127	8	91	0	0	0	0	0	0
CACNA2D1	781	ucsc.edu	37	7	81634774	81634774	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	24	0	5	5	0	0	0
KIAA1324L	222223	bcgsc.ca	37	7	86541472	86541472	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	244	13	210	0	8	8	0	0	0
CROT	54677	bcgsc.ca	37	7	86998785	86998785	+	Missense_Mutation	SNP	C	C	A	rs142614130	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	238	13	218	0	0	0	0	0	0
ABCB4	5244	ucsc.edu;bcgsc.ca	37	7	87074215	87074215	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	78	9	39	0	0	0	0	0	0
ADAM22	53616	bcgsc.ca	37	7	87743915	87743915	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	91	7	98	0	0	0	0	0	0
SRI	6717	bcgsc.ca	37	7	87837865	87837865	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	98	7	53	0	151	151	0	0	0
AKAP9	10142	bcgsc.ca	37	7	91726132	91726132	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	112	9	117	1	31	30	1	0	0
ANKIB1	54467	ucsc.edu	37	7	91980341	91980341	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	27	0	14	14	0	0	0
ASNS	440	bcgsc.ca	37	7	97481702	97481702	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	168	8	160	0	10	10	0	0	0
LMTK2	22853	ucsc.edu	37	7	97832956	97832956	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	47	0	23	23	0	0	0
TRRAP	8295	bcgsc.ca	37	7	98543388	98543388	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	192	13	142	0	0	0	0	0	0
TRRAP	8295	ucsc.edu	37	7	98555700	98555700	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	44	0	10	10	0	0	0
TRRAP	8295	bcgsc.ca	37	7	98589795	98589795	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	311	15	377	0	28	28	0	0	0
ATP5J2-PTCD1	100526740	bcgsc.ca	37	7	99026739	99026739	+	Missense_Mutation	SNP	C	C	A	rs200914747	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	157	8	234	0	2	2	0	0	0
ZSCAN21	7589	ucsc.edu	37	7	99662135	99662135	+	Silent	SNP	C	C	A	rs200616676	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	87	0	3	3	0	0	0
COPS6	10980	bcgsc.ca	37	7	99689103	99689103	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	182	10	202	1	138	138	0	0	0
AP4M1	9179	bcgsc.ca	37	7	99700542	99700542	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	104	7	122	0	6	6	0	0	0
AP4M1	9179	ucsc.edu	37	7	99704099	99704099	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	77	1	19	19	0	0	0
C7orf43	55262	ucsc.edu;bcgsc.ca	37	7	99753421	99753421	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	6	102	0	11	11	0	0	0
ZCWPW1	55063	ucsc.edu	37	7	100014802	100014802	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	56	0	0	0	0	0	0
PCOLCE	5118	bcgsc.ca	37	7	100205372	100205372	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	115	9	147	0	42	42	0	0	0
TFR2	7036	bcgsc.ca	37	7	100231074	100231074	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	5	31	0	1	1	0	0	0
SRRT	51593	ucsc.edu	37	7	100479007	100479007	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	72	1	12	12	0	0	0
MUC17	140453	bcgsc.ca	37	7	100684573	100684573	+	Silent	SNP	G	G	T	rs144023476	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	535	19	773	0	0	0	0	0	0
CLDN15	24146	ucsc.edu	37	7	100880740	100880740	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	43	0	9	9	0	0	0
CUX1	1523	ucsc.edu	37	7	101845248	101845248	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	115	0	21	21	0	0	0
CUX1	1523	ucsc.edu	37	7	101870842	101870842	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	125	0	29	29	0	0	0
ORAI2	80228	bcgsc.ca	37	7	102087040	102087040	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	76	7	119	0	30	30	0	0	0
LRWD1	222229	ucsc.edu	37	7	102109394	102109394	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	65	0	16	16	0	0	0
RELN	5649	bcgsc.ca	37	7	103124179	103124179	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	162	11	230	0	112	112	0	0	0
RELN	5649	ucsc.edu	37	7	103155711	103155711	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	81	0	37	37	0	0	0
CDHR3	222256	ucsc.edu	37	7	105658434	105658434	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	61	0	0	0	0	0	0
NRCAM	4897	bcgsc.ca	37	7	107866747	107866747	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	175	10	175	0	19	19	0	0	0
DOCK4	9732	ucsc.edu	37	7	111430662	111430662	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	37	0	0	0	0	0	0
TES	26136	bcgsc.ca	37	7	115889179	115889179	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	119	9	96	0	81	81	0	0	0
CAV1	857	bcgsc.ca	37	7	116199315	116199315	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	88	7	68	0	19	19	0	0	0
CFTR	1080	bcgsc.ca	37	7	117180331	117180331	+	Silent	SNP	G	G	T	rs200520623	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	145	9	151	0	0	0	0	0	0
CADPS2	93664	ucsc.edu	37	7	122078477	122078477	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	58	0	12	12	0	0	0
LEP	3952	bcgsc.ca	37	7	127892080	127892080	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	155	10	241	2	0	0	0	0	0
FAM71F2	346653	ucsc.edu;bcgsc.ca	37	7	128315725	128315725	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	6	61	0	1	1	0	0	0
FLNC	2318	ucsc.edu	37	7	128483926	128483926	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	83	0	15	15	0	0	0
AHCYL2	23382	bcgsc.ca	37	7	129045004	129045004	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	243	15	178	0	17	17	0	0	0
STRIP2	57464	bcgsc.ca	37	7	129096329	129096329	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	114	9	124	0	0	0	0	0	0
KLHDC10	23008	bcgsc.ca	37	7	129770510	129770510	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	148	10	175	0	15	15	0	0	0
MEST	4232	ucsc.edu	37	7	130140318	130140318	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	31	0	24	24	0	0	0
PLXNA4	91584	ucsc.edu	37	7	131912285	131912285	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	86	0	0	0	0	0	0
PLXNA4	91584	ucsc.edu	37	7	132192563	132192563	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	81	0	0	0	0	0	0
EXOC4	60412	bcgsc.ca	37	7	133314871	133314871	+	Silent	SNP	C	C	A	rs201636348	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	152	11	138	0	15	15	0	0	0
EXOC4	60412	bcgsc.ca	37	7	133689828	133689828	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	224	12	199	0	33	33	0	0	0
AKR1B1	231	bcgsc.ca	37	7	134133219	134133219	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	114	9	128	0	231	230	0	1	0
BPGM	669	ucsc.edu	37	7	134346493	134346493	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	6	63	0	24	24	0	0	0
WDR91	29062	bcgsc.ca	37	7	134873212	134873212	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	228	11	309	0	52	52	0	0	0
NUP205	23165	ucsc.edu	37	7	135269597	135269597	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	49	0	5	5	0	0	0
DGKI	9162	bcgsc.ca	37	7	137308229	137308229	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	307	15	275	0	0	0	0	0	0
ATP6V0A4	50617	bcgsc.ca	37	7	138394469	138394469	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	163	10	212	0	0	0	0	0	0
DENND2A	27147	ucsc.edu	37	7	140225584	140225584	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	42	0	0	0	0	0	0
ADCK2	90956	ucsc.edu	37	7	140374447	140374447	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	61	0	18	18	0	0	0
MGAM	8972	ucsc.edu	37	7	141708397	141708397	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	63	0	1	1	0	0	0
C7orf34	135927	ucsc.edu	37	7	142636728	142636728	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	93	0	0	0	0	0	0
OR9A2	135924	bcgsc.ca	37	7	142724094	142724094	+	Silent	SNP	C	C	A	rs201128692	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	158	11	181	0	0	0	0	0	0
PIP	5304	bcgsc.ca	37	7	142836664	142836664	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	269	15	289	1	0	0	0	0	0
EPHA1	2041	ucsc.edu	37	7	143088723	143088723	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	91	0	1	1	0	0	0
EPHA1	2041	bcgsc.ca	37	7	143098584	143098584	+	Missense_Mutation	SNP	C	C	A	rs144146635	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	182	11	313	0	8	8	0	0	0
TAS2R41	259287	ucsc.edu	37	7	143175358	143175358	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	83	0	0	0	0	0	0
ZNF786	136051	ucsc.edu	37	7	148769047	148769047	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	67	0	4	4	0	0	0
ZNF212	7988	ucsc.edu	37	7	148951474	148951474	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	6	104	0	5	5	0	0	0
SSPO	23145	ucsc.edu	37	7	149481029	149481029	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	34	0	0	0	0	0	0
SSPO	23145	ucsc.edu	37	7	149512269	149512269	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	93	0	0	0	0	0	0
ZNF862	643641	ucsc.edu	37	7	149559308	149559308	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	83	0	8	8	0	0	0
RARRES2	5919	bcgsc.ca	37	7	150037213	150037213	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	608	24	962	2	531	529	0	1	1
ABCB8	11194	bcgsc.ca	37	7	150733657	150733657	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	105	10	159	0	18	18	0	0	0
CHPF2	54480	ucsc.edu	37	7	150935064	150935064	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	97	0	36	36	0	0	0
NUB1	51667	ucsc.edu	37	7	151053255	151053255	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	52	0	60	60	0	0	0
GALNT11	63917	ucsc.edu	37	7	151815860	151815860	+	Missense_Mutation	SNP	C	C	A	rs143956410		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	73	0	1	1	0	0	0
MLL3	58508	bcgsc.ca	37	7	151859528	151859528	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	378	18	393	1	14	14	0	0	0
WDR60	55112	ucsc.edu	37	7	158727108	158727108	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	16	0	0	0	0	0	0
WDR60	55112	ucsc.edu	37	7	158734705	158734705	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	44	0	19	19	0	0	0
CSMD1	64478	ucsc.edu	37	8	2815228	2815228	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	18	4	21	0	0	0	0	0	0
CSMD1	64478	ucsc.edu	37	8	2823308	2823308	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	28	0	0	0	0	0	0
CSMD1	64478	bcgsc.ca	37	8	4851896	4851896	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	7	64	1	0	0	0	0	0
RP1L1	94137	bcgsc.ca	37	8	10480111	10480111	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	279	12	281	0	0	0	0	0	0
SOX7	83595	bcgsc.ca	37	8	10587804	10587804	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	77	0	0	0	0	0	0
BLK	640	ucsc.edu	37	8	11400737	11400737	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	94	1	0	0	0	0	0
SLC7A2	6542	ucsc.edu	37	8	17422621	17422621	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	39	0	0	0	0	0	0
MTUS1	57509	ucsc.edu	37	8	17503502	17503502	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	48	0	29	29	0	0	0
SLC18A1	6570	ucsc.edu	37	8	20005127	20005127	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	54	0	0	0	0	0	0
HR	55806	bcgsc.ca	37	8	21984791	21984791	+	Silent	SNP	C	C	A	rs143466437	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	216	11	332	1	1	1	0	0	0
PHYHIP	9796	ucsc.edu	37	8	22085800	22085800	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	5	44	0	2	2	0	0	0
EGR3	1960	bcgsc.ca	37	8	22548166	22548166	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	101	8	187	0	0	0	0	0	0
TNFRSF10B	8795	ucsc.edu	37	8	22900712	22900712	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	61	0	35	35	0	0	0
ADAM28	10863	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	24209520	24209520	+	Silent	SNP	T	T	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	135	56	116	0	3	2	1	0	0
CDCA2	157313	bcgsc.ca	37	8	25364993	25364993	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	331	17	398	0	0	0	0	0	0
BNIP3L	665	hgsc.bcm.edu	37	8	26240664	26240664	+	Silent	SNP	C	C	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	2	66	0	51	51	0	0	0
EPHX2	2053	bcgsc.ca	37	8	27369366	27369366	+	Missense_Mutation	SNP	C	C	A	rs72475821	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	160	12	158	0	28	27	1	0	0
EPHX2	2053	bcgsc.ca	37	8	27369410	27369410	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	148	11	187	1	28	28	0	0	0
ZNF395	55893	ucsc.edu	37	8	28214208	28214208	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	49	0	41	41	0	0	0
HMBOX1	79618	ucsc.edu	37	8	28827861	28827861	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	7	86	1	9	9	0	0	0
TTI2	80185	ucsc.edu	37	8	33367451	33367451	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	64	0	0	0	0	0	0
TTI2	80185	hgsc.bcm.edu;bcgsc.ca	37	8	33369626	33369626	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	173	12	260	0	5	5	0	0	0
GPR124	25960	ucsc.edu	37	8	37696490	37696490	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	80	0	0	0	0	0	0
RAB11FIP1	80223	broad.mit.edu	37	8	37729419	37729419	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	176	7	164	0	4	4	0	0	0
GOT1L1	137362	ucsc.edu	37	8	37794841	37794841	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	34	0	0	0	0	0	0
C8orf86	389649	bcgsc.ca	37	8	38373927	38373927	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	131	10	108	0	0	0	0	0	0
PLEKHA2	59339	ucsc.edu	37	8	38775549	38775549	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	38	0	12	12	0	0	0
ADAM2	2515	ucsc.edu;bcgsc.ca	37	8	39646211	39646211	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	90	9	49	0	0	0	0	0	0
IDO1	3620	ucsc.edu	37	8	39780987	39780987	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	42	0	0	0	0	0	0
IDO2	169355	ucsc.edu	37	8	39872900	39872900	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	86	0	0	0	0	0	0
ANK1	286	ucsc.edu	37	8	41554205	41554205	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	64	0	0	0	0	0	0
ANK1	286	ucsc.edu	37	8	41555567	41555567	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	61	0	0	0	0	0	0
ANK1	286	bcgsc.ca	37	8	41615556	41615556	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	459	18	648	0	0	0	0	0	0
KAT6A	7994	bcgsc.ca	37	8	41844989	41844989	+	Silent	SNP	G	G	T	rs149778068	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	230	10	270	0	14	14	0	0	0
PLAT	5327	ucsc.edu	37	8	42042613	42042613	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	86	0	5	5	0	0	0
IKBKB	3551	bcgsc.ca	37	8	42129637	42129637	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	195	14	192	0	10	10	0	0	0
SLC20A2	6575	bcgsc.ca	37	8	42294977	42294977	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	136	12	169	1	22	22	0	0	0
HGSNAT	138050	bcgsc.ca	37	8	43037294	43037294	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	361	15	414	0	1	1	0	0	0
HGSNAT	138050	ucsc.edu	37	8	43054661	43054661	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	55	0	45	45	0	0	0
PRKDC	5591	ucsc.edu	37	8	48800126	48800126	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	16	4	16	0	17	17	0	0	0
RGS20	8601	ucsc.edu	37	8	54870845	54870845	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	6	59	0	0	0	0	0	0
XKR4	114786	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	56435874	56435874	+	Silent	SNP	C	C	G	rs4263738	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	19	78	0	13	5	8	0	0
CYP7A1	1581	bcgsc.ca	37	8	59409542	59409542	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	222	10	211	0	0	0	0	0	0
NSMAF	8439	ucsc.edu	37	8	59502578	59502578	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	46	0	0	0	0	0	0
CHD7	55636	ucsc.edu	37	8	61654271	61654271	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	43	0	9	9	0	0	0
CYP7B1	9420	bcgsc.ca	37	8	65528597	65528597	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	109	10	76	0	6	6	0	0	0
VCPIP1	80124	bcgsc.ca	37	8	67577661	67577661	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	217	15	247	0	15	15	0	0	0
CSPP1	79848	bcgsc.ca	37	8	68007603	68007603	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	154	11	115	0	5	5	0	0	0
SULF1	23213	bcgsc.ca	37	8	70512987	70512987	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	257	15	224	0	0	0	0	0	0
SLCO5A1	81796	bcgsc.ca	37	8	70585518	70585518	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	249	14	242	0	0	0	0	0	0
NCOA2	10499	bcgsc.ca	37	8	71050542	71050542	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	7	34	0	16	16	0	0	0
NCOA2	10499	ucsc.edu	37	8	71082535	71082535	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	4	25	0	8	8	0	0	0
EYA1	2138	bcgsc.ca	37	8	72129213	72129213	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	143	8	117	0	0	0	0	0	0
TRPA1	8989	bcgsc.ca	37	8	72963104	72963104	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	148	9	110	0	0	0	0	0	0
TERF1	7013	bcgsc.ca	37	8	73926222	73926222	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	174	13	126	1	0	0	0	0	0
STAU2	27067	bcgsc.ca	37	8	74601011	74601011	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	308	14	260	0	28	28	0	0	0
HNF4G	3174	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	76465335	76465335	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	120	58	83	0	20	13	7	0	0
ZFHX4	79776	ucsc.edu	37	8	77745595	77745595	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	33	0	0	0	0	0	0
LRRCC1	85444	bcgsc.ca	37	8	86050584	86050584	+	Missense_Mutation	SNP	G	G	T	rs200656827	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	177	10	110	0	0	0	0	0	0
RIPK2	8767	bcgsc.ca	37	8	90775202	90775202	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	120	9	93	0	0	0	0	0	0
NECAB1	64168	ucsc.edu	37	8	91893343	91893343	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	20	0	15	15	0	0	0
PDP1	54704	bcgsc.ca	37	8	94935500	94935500	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	202	12	242	0	10	10	0	0	0
RAD54B	25788	ucsc.edu	37	8	95411771	95411771	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	82	9	75	1	0	0	0	0	0
MATN2	4147	ucsc.edu	37	8	99044486	99044486	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	24	0	0	0	0	0	0
SPAG1	6674	bcgsc.ca	37	8	101195643	101195643	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	88	8	66	0	4	4	0	0	0
RNF19A	25897	bcgsc.ca	37	8	101276923	101276923	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	221	11	165	0	40	40	0	0	0
RIMS2	9699	bcgsc.ca	37	8	105261714	105261714	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	104	9	76	0	0	0	0	0	0
DCSTAMP	81501	bcgsc.ca	37	8	105367245	105367245	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	131	10	125	0	0	0	0	0	0
DPYS	1807	bcgsc.ca	37	8	105441930	105441930	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	72	9	58	0	0	0	0	0	0
ZFPM2	23414	ucsc.edu	37	8	106815088	106815088	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	55	0	0	0	0	0	0
PKHD1L1	93035	ucsc.edu	37	8	110402713	110402713	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	15	0	0	0	0	0	0
RAD21	5885	bcgsc.ca	37	8	117864870	117864870	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	116	9	82	0	36	36	0	0	0
ENPP2	5168	ucsc.edu;bcgsc.ca	37	8	120599284	120599284	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	7	46	0	0	0	0	0	0
ZHX1	11244	bcgsc.ca	37	8	124267152	124267152	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	276	12	281	1	31	31	0	0	0
FER1L6	654463	bcgsc.ca	37	8	125109528	125109528	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	9	148	1	0	0	0	0	0
TRMT12	55039	bcgsc.ca	37	8	125463808	125463808	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	149	10	208	0	1	1	0	0	0
TATDN1	83940	bcgsc.ca	37	8	125528161	125528161	+	Missense_Mutation	SNP	C	C	A	rs201105584	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	108	9	80	0	31	31	0	0	0
ZNF572	137209	bcgsc.ca	37	8	125988961	125988961	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	104	9	128	0	3	3	0	0	0
SQLE	6713	ucsc.edu	37	8	126011786	126011786	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	62	0	3	3	0	0	0
FAM84B	157638	ucsc.edu	37	8	127569209	127569209	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	60	0	10	10	0	0	0
ADCY8	114	bcgsc.ca	37	8	131916248	131916248	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	357	17	329	0	0	0	0	0	0
FAM135B	51059	bcgsc.ca	37	8	139163791	139163791	+	Missense_Mutation	SNP	G	G	T	rs147601721	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	126	8	157	0	0	0	0	0	0
COL22A1	169044	ucsc.edu	37	8	139890116	139890116	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	51	0	0	0	0	0	0
PTK2	5747	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	141745382	141745382	+	Silent	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	29	15	41	0	56	25	30	0	1
GPR20	2843	ucsc.edu	37	8	142367838	142367838	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	76	0	0	0	0	0	0
ARC	23237	ucsc.edu	37	8	143694641	143694641	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	81	0	0	0	0	0	0
CYP11B1	1584	ucsc.edu	37	8	143958558	143958558	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	76	0	0	0	0	0	0
C8orf31	286122	ucsc.edu	37	8	144124643	144124643	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	84	0	3	3	0	0	0
RHPN1	114822	ucsc.edu	37	8	144459604	144459604	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	64	0	16	16	0	0	0
FAM83H	286077	bcgsc.ca	37	8	144809762	144809762	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	13	4	20	0	10	10	0	0	0
PUF60	22827	ucsc.edu	37	8	144900224	144900224	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	40	0	133	133	0	0	0
PLEC	5339	ucsc.edu	37	8	144994326	144994326	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	91	1	62	62	0	0	0
OPLAH	26873	broad.mit.edu	37	8	145113801	145113801	+	Splice_Site	DEL	T	T	-	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	6	2	14	0	0	0	0	0	0
SLC52A2	79581	bcgsc.ca	37	8	145583324	145583324	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	150	10	191	0	36	36	0	0	0
KANK1	23189	ucsc.edu	37	9	731226	731226	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	31	0	24	24	0	0	0
GLIS3	169792	bcgsc.ca	37	9	4125801	4125801	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	215	13	206	0	6	6	0	0	0
JAK2	3717	bcgsc.ca	37	9	5044416	5044416	+	Missense_Mutation	SNP	C	C	A	rs147483622	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	167	10	90	0	5	5	0	0	0
PDCD1LG2	80380	ucsc.edu	37	9	5534918	5534918	+	Nonsense_Mutation	SNP	G	G	T	rs61760970	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	54	5	95	0	1	1	0	0	0
PDCD1LG2	80380	ucsc.edu	37	9	5535009	5535009	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	47	0	1	1	0	0	0
KIAA1432	57589	bcgsc.ca	37	9	5757329	5757329	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	372	16	351	1	10	10	0	0	0
KIAA2026	158358	bcgsc.ca	37	9	5920622	5920622	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	581	24	641	3	13	13	0	0	0
KIAA2026	158358	bcgsc.ca	37	9	5921984	5921984	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	356	16	265	0	7	6	1	0	0
GLDC	2731	ucsc.edu	37	9	6554682	6554682	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	36	0	0	0	0	0	0
GLDC	2731	ucsc.edu	37	9	6554706	6554706	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	5	34	0	38	38	0	0	0
KDM4C	23081	ucsc.edu	37	9	6986622	6986622	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	55	0	10	10	0	0	0
C9orf123	90871	broad.mit.edu	37	9	7799724	7799724	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	53	0	84	84	0	0	0
CNTLN	54875	bcgsc.ca	37	9	17484395	17484395	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	227	12	152	0	8	8	0	0	0
DMRTA1	63951	ucsc.edu	37	9	22451757	22451757	+	Silent	SNP	C	C	A	rs141336718	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	7	87	0	19	19	0	0	0
CAAP1	79886	bcgsc.ca	37	9	26842554	26842554	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	416	16	352	0	26	26	0	0	0
DDX58	23586	hgsc.bcm.edu;bcgsc.ca	37	9	32485174	32485174	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	235	13	156	1	0	0	0	0	0
KIF24	347240	ucsc.edu	37	9	34297085	34297085	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	6	16	0	0	0	0	0	0
ARID3C	138715	ucsc.edu	37	9	34622446	34622446	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	6	121	0	0	0	0	0	0
SIGMAR1	10280	ucsc.edu	37	9	34637338	34637338	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	5	30	0	47	47	0	0	0
UNC13B	10497	ucsc.edu	37	9	35397683	35397683	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	53	0	34	34	0	0	0
RUSC2	9853	ucsc.edu	37	9	35556026	35556026	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	60	6	117	0	33	33	0	0	0
TESK1	7016	ucsc.edu	37	9	35609499	35609499	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	99	0	35	35	0	0	0
TLN1	7094	ucsc.edu	37	9	35698483	35698483	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	57	0	135	135	0	0	0
GLIPR2	152007	ucsc.edu	37	9	36150940	36150940	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	61	0	1	1	0	0	0
EXOSC3	51010	ucsc.edu	37	9	37784995	37784995	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	39	0	10	10	0	0	0
SHB	6461	ucsc.edu	37	9	37974796	37974796	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	96	10	79	1	48	48	0	0	0
PTAR1	375743	ucsc.edu	37	9	72347100	72347100	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	60	0	22	22	0	0	0
PTAR1	375743	ucsc.edu	37	9	72356752	72356752	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	26	0	20	20	0	0	0
C9orf135	138255	bcgsc.ca	37	9	72521022	72521022	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	123	9	113	2	0	0	0	0	0
TRPM6	140803	bcgsc.ca	37	9	77354735	77354735	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	143	9	166	0	0	0	0	0	0
TRPM6	140803	bcgsc.ca	37	9	77435227	77435227	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	86	8	74	0	0	0	0	0	0
PCSK5	5125	ucsc.edu	37	9	78911607	78911607	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	62	0	1	1	0	0	0
PRUNE2	158471	ucsc.edu	37	9	79319830	79319830	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	31	0	75	75	0	0	0
PRUNE2	158471	bcgsc.ca	37	9	79323694	79323694	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	169	11	205	0	57	57	0	0	0
PRUNE2	158471	bcgsc.ca	37	9	79324370	79324370	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	269	15	318	1	28	28	0	0	0
TLE1	7088	bcgsc.ca	37	9	84231009	84231009	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	221	11	250	0	18	18	0	0	0
SPATA31D1	389763	bcgsc.ca	37	9	84608536	84608536	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	303	17	343	3	0	0	0	0	0
SPATA31D1	389763	bcgsc.ca	37	9	84609142	84609142	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	226	14	322	0	0	0	0	0	0
SPATA31D1	389763	ucsc.edu	37	9	84609370	84609370	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	5	26	0	0	0	0	0	0
RMI1	80010	bcgsc.ca	37	9	86617477	86617477	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	272	15	209	0	6	6	0	0	0
SLC28A3	64078	bcgsc.ca	37	9	86900316	86900316	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	93	8	104	0	0	0	0	0	0
DAPK1	1612	bcgsc.ca	37	9	90311943	90311943	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	277	13	223	0	36	36	0	0	0
DAPK1	1612	ucsc.edu	37	9	90321447	90321447	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	45	0	69	69	0	0	0
DAPK1	1612	ucsc.edu;bcgsc.ca	37	9	90321872	90321872	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	8	118	1	85	85	0	0	0
LOC286238	0	ucsc.edu	37	9	91266902	91266902	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	6	52	0	0	0	0	0	0
SEMA4D	10507	bcgsc.ca	37	9	91994503	91994503	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	224	10	261	0	27	27	0	0	0
NFIL3	4783	bcgsc.ca	37	9	94172746	94172746	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	454	16	395	1	20	20	0	0	0
ECM2	1842	bcgsc.ca	37	9	95267840	95267840	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	263	11	173	0	3	3	0	0	0
WNK2	65268	ucsc.edu	37	9	96055293	96055293	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	5	54	0	0	0	0	0	0
MIRLET7A1	406881	bcgsc.ca	37	9	96938286	96938286	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	113	9	102	0	1	1	0	0	0
FBP1	2203	ucsc.edu	37	9	97382752	97382752	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	53	1	44	44	0	0	0
C9orf3	84909	ucsc.edu	37	9	97522204	97522204	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	75	1	0	0	0	0	0
CCDC180	0	ucsc.edu	37	9	100077228	100077228	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	5	42	0	0	0	0	0	0
TDRD7	23424	bcgsc.ca	37	9	100249462	100249462	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	141	10	102	0	0	0	0	0	0
HEMGN	55363	bcgsc.ca	37	9	100693307	100693307	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	120	10	143	0	0	0	0	0	0
GABBR2	9568	ucsc.edu	37	9	101235607	101235607	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	50	1	1	1	0	0	0
COL15A1	1306	ucsc.edu	37	9	101706443	101706443	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	80	0	0	0	0	0	0
ALG2	85365	ucsc.edu	37	9	101984130	101984130	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	40	0	7	7	0	0	0
SEC61B	10952	bcgsc.ca	37	9	101992685	101992685	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	255	14	216	0	71	71	0	0	0
TEX10	54881	bcgsc.ca	37	9	103064574	103064574	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	171	12	128	0	1	1	0	0	0
ALDOB	229	bcgsc.ca	37	9	104190796	104190796	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	161	11	143	1	0	0	0	0	0
RNF20	56254	bcgsc.ca	37	9	104309134	104309134	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	128	8	118	0	19	19	0	0	0
ABCA1	19	bcgsc.ca	37	9	107602594	107602594	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	8	106	0	12	12	0	0	0
CTNNAL1	8727	bcgsc.ca	37	9	111745483	111745483	+	Missense_Mutation	SNP	G	G	T	rs140530317	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	80	7	52	0	11	11	0	0	0
SVEP1	79987	bcgsc.ca	37	9	113194224	113194224	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	181	10	131	0	2	2	0	0	0
SVEP1	79987	ucsc.edu	37	9	113243650	113243650	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	36	0	0	0	0	0	0
KIAA0368	23392	ucsc.edu	37	9	114132754	114132754	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	36	0	41	41	0	0	0
KIAA0368	23392	bcgsc.ca	37	9	114134734	114134734	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	253	12	216	0	18	18	0	0	0
KIAA0368	23392	bcgsc.ca	37	9	114178594	114178594	+	Silent	SNP	G	G	T	rs200785736		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	8	86	1	22	22	0	0	0
KIAA0368	23392	bcgsc.ca	37	9	114246956	114246956	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	257	11	275	0	0	0	0	0	0
KIAA0368	23392	bcgsc.ca	37	9	114247015	114247015	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	275	12	274	0	0	0	0	0	0
FKBP15	23307	ucsc.edu	37	9	115928364	115928364	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	33	0	16	16	0	0	0
HDHD3	81932	ucsc.edu	37	9	116136568	116136568	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	61	0	40	40	0	0	0
RGS3	5998	ucsc.edu	37	9	116276779	116276779	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	7	94	0	16	16	0	0	0
COL27A1	85301	bcgsc.ca	37	9	116925049	116925049	+	Silent	SNP	C	C	A	rs200096843		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	95	9	139	0	17	17	0	0	0
COL27A1	85301	ucsc.edu	37	9	116968545	116968545	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	62	0	14	14	0	0	0
AKNA	80709	ucsc.edu	37	9	117104331	117104331	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	89	0	11	11	0	0	0
TNC	3371	bcgsc.ca	37	9	117819658	117819658	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	363	18	306	1	0	0	0	0	0
DBC1	1620	ucsc.edu	37	9	122000988	122000988	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	66	7	97	0	2	2	0	0	0
CDK5RAP2	55755	bcgsc.ca	37	9	123330632	123330632	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	301	15	264	0	8	8	0	0	0
FBXW2	26190	bcgsc.ca	37	9	123538394	123538394	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	175	9	209	0	45	45	0	0	0
DAB2IP	153090	ucsc.edu	37	9	124522683	124522683	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	58	0	55	55	0	0	0
PTGS1	5742	bcgsc.ca	37	9	125148814	125148814	+	Missense_Mutation	SNP	G	G	T	rs202234148	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	245	14	304	0	6	6	0	0	0
OR1N2	138882	bcgsc.ca	37	9	125315673	125315673	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	277	14	306	0	0	0	0	0	0
MIR601	693186	ucsc.edu	37	9	126164828	126164828	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	72	7	86	0	0	0	0	0	0
MIR181B2	406956	ucsc.edu	37	9	127456023	127456023	+	RNA	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	45	0	0	0	0	0	0
GAPVD1	26130	bcgsc.ca	37	9	128067396	128067396	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	100	9	77	0	4	4	0	0	0
GAPVD1	26130	ucsc.edu	37	9	128069691	128069691	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	64	6	44	0	0	0	0	0	0
LRSAM1	90678	ucsc.edu	37	9	130249980	130249980	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	44	0	20	20	0	0	0
FAM129B	64855	ucsc.edu	37	9	130280133	130280133	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	5	32	0	212	212	0	0	0
TTC16	158248	ucsc.edu	37	9	130487069	130487069	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	4	38	0	0	0	0	0	0
ST6GALNAC6	30815	ucsc.edu	37	9	130653237	130653237	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	78	0	21	21	0	0	0
TRUB2	26995	ucsc.edu	37	9	131072155	131072155	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	53	0	0	0	0	0	0
TRUB2	26995	bcgsc.ca	37	9	131076114	131076114	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	145	11	215	3	33	32	0	0	1
SPTAN1	6709	ucsc.edu	37	9	131373992	131373992	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	53	0	0	0	0	0	0
PKN3	29941	ucsc.edu	37	9	131469684	131469684	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	58	1	0	0	0	0	0
TBC1D13	54662	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	131565636	131565636	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	65	34	109	0	30	16	14	0	0
ENDOG	2021	ucsc.edu	37	9	131583043	131583043	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	18	4	27	0	81	81	0	0	0
CCBL1	883	ucsc.edu	37	9	131597921	131597921	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	73	1	9	9	0	0	0
LRRC8A	56262	bcgsc.ca	37	9	131670331	131670331	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	133	9	190	0	43	43	0	0	0
NUP188	23511	bcgsc.ca	37	9	131730825	131730825	+	Missense_Mutation	SNP	G	G	T	rs181700778	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	125	8	125	0	2	2	0	0	0
FAM73B	84895	ucsc.edu	37	9	131811716	131811716	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	48	0	15	15	0	0	0
PPP2R4	5524	bcgsc.ca	37	9	131885364	131885364	+	Missense_Mutation	SNP	C	C	A	rs11554661	bycluster	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	192	12	255	2	63	63	0	0	0
ABL1	25	bcgsc.ca	37	9	133748300	133748300	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	109	8	131	0	37	37	0	0	0
ABL1	25	bcgsc.ca	37	9	133760855	133760855	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	102	7	130	0	34	34	0	0	0
LAMC3	10319	ucsc.edu;bcgsc.ca	37	9	133952712	133952712	+	Silent	SNP	G	G	T	rs200521528	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	10	77	0	0	0	0	0	0
NUP214	8021	bcgsc.ca	37	9	134019862	134019862	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	181	13	309	0	14	14	0	0	0
PRRC2B	84726	ucsc.edu	37	9	134350927	134350927	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	44	0	27	27	0	0	0
PRRC2B	84726	ucsc.edu	37	9	134361557	134361557	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	18	4	22	0	0	0	0	0	0
DDX31	64794	bcgsc.ca	37	9	135523846	135523846	+	Missense_Mutation	SNP	C	C	A	rs200289752	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	254	15	241	2	11	11	0	0	0
DDX31	64794	ucsc.edu	37	9	135527835	135527835	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	84	8	83	0	0	0	0	0	0
AK8	158067	ucsc.edu	37	9	135601313	135601313	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	6	46	0	0	0	0	0	0
TSC1	7248	bcgsc.ca	37	9	135786057	135786057	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	236	14	315	0	9	9	0	0	0
CEL	1056	ucsc.edu;bcgsc.ca	37	9	135940073	135940073	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	6	94	0	0	0	0	0	0
ADAMTSL2	9719	bcgsc.ca	37	9	136412218	136412218	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	296	15	426	1	0	0	0	0	0
DBH	1621	ucsc.edu	37	9	136501832	136501832	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	24	4	33	0	0	0	0	0	0
DBH	1621	ucsc.edu	37	9	136508555	136508555	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	62	7	129	0	0	0	0	0	0
RXRA	6256	bcgsc.ca	37	9	137300869	137300869	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	104	8	182	0	20	20	0	0	0
FCN2	2220	bcgsc.ca	37	9	137779022	137779022	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	108	9	170	0	0	0	0	0	0
FCN1	2219	bcgsc.ca	37	9	137803076	137803076	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	276	15	376	0	0	0	0	0	0
CARD9	64170	bcgsc.ca	37	9	139266355	139266355	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	264	11	531	1	1	1	0	0	0
SNAPC4	6621	ucsc.edu	37	9	139272066	139272066	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	4	85	0	21	21	0	0	0
SNAPC4	6621	ucsc.edu	37	9	139276335	139276335	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	106	0	5	5	0	0	0
SNAPC4	6621	ucsc.edu	37	9	139289303	139289303	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	66	0	9	9	0	0	0
SDCCAG3	10807	ucsc.edu	37	9	139301658	139301658	+	Missense_Mutation	SNP	G	G	T	rs199971666	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	43	0	16	16	0	0	0
SEC16A	9919	ucsc.edu;bcgsc.ca	37	9	139361523	139361523	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	63	9	90	0	0	0	0	0	0
NOTCH1	4851	ucsc.edu	37	9	139390699	139390699	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	64	0	25	25	0	0	0
MAMDC4	158056	ucsc.edu	37	9	139749757	139749757	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	50	5	71	0	6	6	0	0	0
MAMDC4	158056	ucsc.edu	37	9	139751481	139751481	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	80	0	0	0	0	0	0
FUT7	2529	ucsc.edu	37	9	139925207	139925207	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	44	0	0	0	0	0	0
DPP7	29952	ucsc.edu	37	9	140007906	140007906	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	6	68	0	67	67	0	0	0
SSNA1	8636	ucsc.edu	37	9	140083648	140083648	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	59	0	135	134	1	0	0
NELFB	25920	ucsc.edu	37	9	140161443	140161443	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	78	0	83	83	0	0	0
NSMF	26012	ucsc.edu	37	9	140347574	140347574	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	92	0	97	97	0	0	0
PNPLA7	375775	ucsc.edu	37	9	140354850	140354850	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	5	38	0	10	10	0	0	0
CACNA1B	774	ucsc.edu	37	9	140941391	140941391	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	71	0	0	0	0	0	0
CACNA1B	774	bcgsc.ca	37	9	140948315	140948315	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	367	16	450	1	0	0	0	0	0
AKAP17A	8227	ucsc.edu	37	X	1720028	1720028	+	Silent	SNP	G	G	T	rs146848129	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	104	0	11	11	0	0	0
NLGN4X	57502	ucsc.edu	37	X	5827147	5827147	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	5	50	0	0	0	0	0	0
STS	412	ucsc.edu	37	X	7175288	7175288	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	31	0	0	0	0	0	0
PNPLA4	8228	ucsc.edu	37	X	7894127	7894127	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	17	0	22	22	0	0	0
KAL1	3730	ucsc.edu	37	X	8591693	8591693	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	50	0	0	0	0	0	0
SHROOM2	357	ucsc.edu	37	X	9862612	9862612	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	33	0	28	28	0	0	0
WWC3	55841	ucsc.edu	37	X	10096192	10096192	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	50	0	0	0	0	0	0
ARHGAP6	395	ucsc.edu	37	X	11174684	11174684	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	34	0	7	7	0	0	0
AMELX	265	bcgsc.ca	37	X	11316355	11316355	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	218	12	194	2	0	0	0	0	0
ARHGAP6	395	ucsc.edu	37	X	11682935	11682935	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	20	4	26	0	4	4	0	0	0
PRPS2	5634	ucsc.edu	37	X	12817352	12817352	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	51	5	74	0	21	21	0	0	0
CA5B	11238	bcgsc.ca	37	X	15790730	15790730	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	130	10	159	0	0	0	0	0	0
GRPR	2925	ucsc.edu	37	X	16142472	16142472	+	Silent	SNP	G	G	T	rs35636070	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	61	6	87	0	0	0	0	0	0
TXLNG	55787	ucsc.edu;bcgsc.ca	37	X	16859600	16859600	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	81	8	74	0	10	10	0	0	0
NHS	4810	ucsc.edu	37	X	17743909	17743909	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	62	0	11	11	0	0	0
SUPT20HL2	170067	ucsc.edu	37	X	24329488	24329488	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	69	0	0	0	0	0	0
PCYT1B	9468	ucsc.edu	37	X	24637123	24637123	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	44	0	0	0	0	0	0
MAGEB18	286514	ucsc.edu	37	X	26157846	26157846	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	28	0	0	0	0	0	0
MAGEB10	139422	ucsc.edu	37	X	27840340	27840340	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	4	28	0	0	0	0	0	0
DCAF8L1	139425	ucsc.edu	37	X	27999049	27999049	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	24	0	0	0	0	0	0
GK	2710	bcgsc.ca	37	X	30709268	30709268	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	149	10	106	0	7	7	0	0	0
TAB3	257397	ucsc.edu	37	X	30873153	30873153	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	52	0	21	21	0	0	0
DMD	1756	ucsc.edu	37	X	31279100	31279100	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	31	0	0	0	0	0	0
DMD	1756	ucsc.edu	37	X	32613912	32613912	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	31	0	0	0	0	0	0
MAGEB16	139604	ucsc.edu	37	X	35820968	35820968	+	Missense_Mutation	SNP	C	C	A	rs141135450	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	5	54	0	0	0	0	0	0
FAM47C	442444	ucsc.edu	37	X	37027236	37027236	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	89	1	0	0	0	0	0
FAM47C	442444	ucsc.edu	37	X	37027370	37027370	+	Missense_Mutation	SNP	G	G	T	rs140151778	byfrequency;alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	91	1	0	0	0	0	0
SRPX	8406	ucsc.edu	37	X	38037550	38037550	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	6	40	0	0	0	0	0	0
BCOR	54880	ucsc.edu	37	X	39923700	39923700	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	57	0	21	21	0	0	0
USP9X	8239	ucsc.edu	37	X	41075900	41075900	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	47	5	20	0	0	0	0	0	0
KDM6A	7403	ucsc.edu	37	X	44918624	44918624	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	49	5	35	0	2	2	0	0	0
KDM6A	7403	ucsc.edu	37	X	44919322	44919322	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	28	0	0	0	0	0	0
KDM6A	7403	ucsc.edu	37	X	44920615	44920615	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	6	23	0	2	2	0	0	0
RP2	6102	ucsc.edu	37	X	46719425	46719425	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	35	0	0	0	0	0	0
PHF16	9767	ucsc.edu	37	X	46918094	46918094	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	39	0	2	2	0	0	0
RGN	9104	ucsc.edu	37	X	46952307	46952307	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	29	1	0	0	0	0	0
UBA1	7317	ucsc.edu	37	X	47074246	47074246	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	62	0	214	214	0	0	0
USP11	8237	ucsc.edu	37	X	47101653	47101653	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	5	40	0	29	29	0	0	0
USP11	8237	ucsc.edu	37	X	47106787	47106787	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	59	0	70	70	0	0	0
ZNF157	7712	ucsc.edu	37	X	47272039	47272039	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	4	34	0	1	1	0	0	0
ZNF630	57232	bcgsc.ca	37	X	47919887	47919887	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	107	9	91	1	3	3	0	0	0
EBP	10682	ucsc.edu	37	X	48385608	48385608	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	73	0	55	55	0	0	0
RBM3	5935	ucsc.edu	37	X	48434010	48434010	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	6	65	0	292	292	0	0	0
KCND1	3750	ucsc.edu	37	X	48826570	48826570	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	16	4	31	0	1	1	0	0	0
GRIPAP1	56850	ucsc.edu	37	X	48849859	48849859	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	17	5	34	0	13	13	0	0	0
MIR362	574030	ucsc.edu	37	X	49773580	49773580	+	RNA	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	34	0	0	0	0	0	0
GSPT2	23708	ucsc.edu	37	X	51486758	51486758	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	27	4	61	0	7	7	0	0	0
GSPT2	23708	ucsc.edu	37	X	51487957	51487957	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	70	7	71	0	6	6	0	0	0
XAGE5	170627	ucsc.edu	37	X	52847214	52847214	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	27	0	0	0	0	0	0
KDM5C	8242	ucsc.edu;bcgsc.ca	37	X	53222749	53222749	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	25	6	44	0	34	34	0	0	0
SMC1A	8243	ucsc.edu	37	X	53407589	53407589	+	Missense_Mutation	SNP	C	C	A	rs138015913	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	36	0	13	13	0	0	0
SMC1A	8243	ucsc.edu	37	X	53407596	53407596	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	39	0	32	32	0	0	0
HSD17B10	3028	ucsc.edu	37	X	53458366	53458366	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	30	0	97	97	0	0	0
HSD17B10	3028	ucsc.edu	37	X	53458407	53458407	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	5	35	0	95	95	0	0	0
HUWE1	10075	ucsc.edu	37	X	53581878	53581878	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	21	4	39	0	0	0	0	0	0
HUWE1	10075	ucsc.edu	37	X	53589171	53589171	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	28	0	65	65	0	0	0
HUWE1	10075	ucsc.edu	37	X	53607876	53607876	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	5	42	0	15	15	0	0	0
HUWE1	10075	ucsc.edu	37	X	53610634	53610634	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	52	0	37	37	0	0	0
HUWE1	10075	ucsc.edu	37	X	53629561	53629561	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	22	0	47	47	0	0	0
HUWE1	10075	ucsc.edu	37	X	53651559	53651559	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	46	5	28	0	0	0	0	0	0
PHF8	23133	ucsc.edu	37	X	54037718	54037718	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	25	0	0	0	0	0	0
ITIH6	347365	ucsc.edu	37	X	54777814	54777814	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	46	0	0	0	0	0	0
PFKFB1	5207	ucsc.edu	37	X	54960266	54960266	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	56	1	0	0	0	0	0
PFKFB1	5207	ucsc.edu	37	X	55020413	55020413	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	21	0	0	0	0	0	0
FAAH2	158584	ucsc.edu	37	X	57475058	57475058	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	73	7	80	0	10	10	0	0	0
ZC4H2	55906	ucsc.edu	37	X	64138934	64138934	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	71	0	1	1	0	0	0
AWAT2	158835	ucsc.edu	37	X	69262197	69262197	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	44	0	0	0	0	0	0
ARR3	407	ucsc.edu	37	X	69497980	69497980	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	5	23	0	0	0	0	0	0
RAB41	347517	ucsc.edu	37	X	69504140	69504140	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	69	0	1	1	0	0	0
KIF4A	24137	ucsc.edu	37	X	69624574	69624574	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	5	26	0	0	0	0	0	0
TEX11	56159	ucsc.edu	37	X	69890365	69890365	+	Splice_Site	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	35	4	36	0	0	0	0	0	0
TEX11	56159	ucsc.edu	37	X	69902665	69902665	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	31	5	20	0	0	0	0	0	0
MED12	9968	ucsc.edu	37	X	70347860	70347860	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	71	0	8	8	0	0	0
MED12	9968	ucsc.edu	37	X	70347872	70347872	+	Silent	SNP	G	G	T	rs185658730	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	74	0	13	13	0	0	0
NLGN3	54413	ucsc.edu;bcgsc.ca	37	X	70389594	70389594	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	5	34	0	0	0	0	0	0
TAF1	6872	ucsc.edu	37	X	70596811	70596811	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	77	0	0	0	0	0	0
TAF1	6872	ucsc.edu	37	X	70621570	70621570	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	71	7	81	0	9	9	0	0	0
ACRC	93953	bcgsc.ca	37	X	70823664	70823664	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	175	10	231	0	0	0	0	0	0
NHSL2	340527	ucsc.edu	37	X	71360119	71360119	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	55	6	64	1	1	1	0	0	0
RPS4X	6191	ucsc.edu	37	X	71493218	71493218	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	20	0	730	728	1	0	1
CITED1	4435	ucsc.edu	37	X	71521714	71521714	+	Silent	SNP	G	G	T	rs201380209	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	58	0	1	1	0	0	0
PHKA1	5255	ucsc.edu	37	X	71840688	71840688	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	5	48	0	1	1	0	0	0
MAGEE2	139599	ucsc.edu	37	X	75004627	75004627	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	38	4	51	0	0	0	0	0	0
PBDC1	51260	ucsc.edu	37	X	75393427	75393427	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	26	4	33	0	0	0	0	0	0
BRWD3	254065	ucsc.edu	37	X	79932779	79932779	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	30	0	9	9	0	0	0
BRWD3	254065	ucsc.edu	37	X	79945543	79945543	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	56	6	34	0	3	3	0	0	0
HDX	139324	ucsc.edu	37	X	83723735	83723735	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	6	58	0	1	1	0	0	0
CHM	1121	ucsc.edu	37	X	85236741	85236741	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	14	0	0	0	0	0	0
DACH2	117154	ucsc.edu	37	X	85769337	85769337	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	28	0	0	0	0	0	0
TGIF2LX	90316	ucsc.edu	37	X	89177125	89177125	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	48	5	82	0	0	0	0	0	0
FAM133A	286499	ucsc.edu	37	X	92964429	92964429	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	5	41	0	0	0	0	0	0
NOX1	27035	ucsc.edu	37	X	100104822	100104822	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	39	0	0	0	0	0	0
ARMCX3	51566	ucsc.edu	37	X	100880267	100880267	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	93	0	51	51	0	0	0
BHLHB9	80823	ucsc.edu	37	X	102005016	102005016	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	39	4	39	0	1	1	0	0	0
NXF3	56000	bcgsc.ca	37	X	102334297	102334297	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	111	9	202	0	0	0	0	0	0
NXF3	56000	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	102337711	102337711	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	91	87	155	1	0	0	0	0	0
SLC25A53	401612	ucsc.edu	37	X	103349652	103349652	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	52	5	96	0	0	0	0	0	0
ZCCHC18	644353	ucsc.edu	37	X	103359522	103359522	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	16	4	18	0	0	0	0	0	0
IL1RAPL2	26280	bcgsc.ca	37	X	105011205	105011205	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	158	10	118	1	0	0	0	0	0
NRK	203447	ucsc.edu	37	X	105152718	105152718	+	Splice_Site	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	30	0	0	0	0	0	0
NRK	203447	ucsc.edu	37	X	105152775	105152775	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	49	0	0	0	0	0	0
COL4A6	1288	ucsc.edu	37	X	107424137	107424137	+	Silent	SNP	G	G	T	rs200299007	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	18	0	0	0	0	0	0
COL4A6	1288	ucsc.edu	37	X	107681419	107681419	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	23	4	44	0	0	0	0	0	0
COL4A5	1287	ucsc.edu	37	X	107867553	107867553	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	26	0	0	0	0	0	0
GUCY2F	2986	ucsc.edu	37	X	108719037	108719037	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	34	4	105	0	0	0	0	0	0
ACSL4	2182	ucsc.edu	37	X	108926382	108926382	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	57	6	61	0	24	24	0	0	0
RGAG1	57529	bcgsc.ca	37	X	109697626	109697626	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	102	8	112	0	0	0	0	0	0
LHFPL1	340596	bcgsc.ca	37	X	111914584	111914584	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	148	11	215	1	0	0	0	0	0
IL13RA2	3598	ucsc.edu	37	X	114239760	114239760	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	67	7	47	0	0	0	0	0	0
LRCH2	57631	ucsc.edu	37	X	114357399	114357399	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	32	4	26	0	1	1	0	0	0
DOCK11	139818	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	117731503	117731503	+	Silent	SNP	A	A	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	91	87	90	0	0	0	0	0	0
DOCK11	139818	bcgsc.ca	37	X	117785972	117785972	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	161	9	128	0	87	87	0	0	0
KIAA1210	57481	ucsc.edu	37	X	118222930	118222930	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	58	0	0	0	0	0	0
KIAA1210	57481	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	118223094	118223094	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	50	57	0	0	0	0	0	0
KIAA1210	57481	ucsc.edu	37	X	118223336	118223336	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	40	4	56	0	0	0	0	0	0
KIAA1210	57481	ucsc.edu;bcgsc.ca	37	X	118281512	118281512	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	6	47	0	0	0	0	0	0
ATP1B4	23439	bcgsc.ca	37	X	119496039	119496039	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	128	8	177	0	0	0	0	0	0
OCRL	4952	ucsc.edu	37	X	128722215	128722215	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	37	4	51	0	22	22	0	0	0
ZDHHC9	51114	bcgsc.ca	37	X	128946750	128946750	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	88	8	93	0	41	41	0	0	0
BCORL1	63035	bcgsc.ca	37	X	129162645	129162645	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	162	11	170	0	15	15	0	0	0
ELF4	2000	ucsc.edu	37	X	129205341	129205341	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	30	4	38	0	12	12	0	0	0
RBMX2	51634	ucsc.edu	37	X	129546526	129546526	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	45	4	73	0	10	10	0	0	0
FRMD7	90167	bcgsc.ca	37	X	131212726	131212726	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	195	11	215	2	0	0	0	0	0
FAM127C	441518	ucsc.edu	37	X	134156207	134156207	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	59	0	8	8	0	0	0
SLC9A6	10479	bcgsc.ca	37	X	135095130	135095130	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	204	11	186	0	24	24	0	0	0
VGLL1	51442	ucsc.edu	37	X	135618256	135618256	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	67	0	0	0	0	0	0
VGLL1	51442	ucsc.edu	37	X	135618272	135618272	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	77	0	3	3	0	0	0
SLITRK2	84631	ucsc.edu	37	X	144905624	144905624	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	44	4	55	0	0	0	0	0	0
MAGEA8	4107	ucsc.edu	37	X	149013255	149013255	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	56	0	0	0	0	0	0
HMGB3	3149	ucsc.edu	37	X	150155614	150155614	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	4	63	0	0	0	0	0	0
PASD1	139135	ucsc.edu	37	X	150840986	150840986	+	Missense_Mutation	SNP	C	C	A	rs150496278	alternate_allele	TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	58	6	73	1	0	0	0	0	0
GABRE	2564	ucsc.edu	37	X	151123242	151123242	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	28	4	47	0	0	0	0	0	0
GABRQ	55879	ucsc.edu	37	X	151815602	151815602	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	43	4	62	0	0	0	0	0	0
ZNF275	10838	ucsc.edu	37	X	152612320	152612320	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	42	5	75	0	5	5	0	0	0
ATP2B3	492	bcgsc.ca	37	X	152827635	152827635	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	118	10	171	0	3	3	0	0	0
ATP2B3	492	bcgsc.ca	37	X	152845563	152845563	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	119	9	182	2	0	0	0	0	0
L1CAM	3897	bcgsc.ca	37	X	153129787	153129787	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	107	9	165	0	0	0	0	0	0
L1CAM	3897	ucsc.edu	37	X	153132302	153132302	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	22	4	30	0	0	0	0	0	0
HCFC1	3054	ucsc.edu;bcgsc.ca	37	X	153215063	153215063	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	79	8	101	0	0	0	0	0	0
HCFC1	3054	ucsc.edu	37	X	153227725	153227725	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	19	4	23	0	15	15	0	0	0
FLNA	2316	ucsc.edu	37	X	153581823	153581823	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	36	4	74	0	0	0	0	0	0
EMD	2010	bcgsc.ca	37	X	153608345	153608345	+	Silent	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	121	9	180	0	78	78	0	0	0
RPL10	6134	bcgsc.ca	37	X	153627684	153627684	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	82	7	119	0	0	0	0	0	0
PLXNA3	55558	ucsc.edu	37	X	153692782	153692782	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	41	4	71	0	19	19	0	0	0
PLXNA3	55558	ucsc.edu	37	X	153696321	153696321	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	33	4	75	0	11	11	0	0	0
GAB3	139716	ucsc.edu	37	X	153924260	153924260	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	59	6	35	0	0	0	0	0	0
F8	2157	bcgsc.ca	37	X	154090068	154090068	+	Silent	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	170	11	212	1	9	9	0	0	0
IL9R	3581	bcgsc.ca	37	X	155231119	155231119	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	181	11	472	2	0	0	0	0	0
BHMT	635	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	78426827	78426828	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	276	105	276	0	0	0	0	0	0
IREB2	3658	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	78765688	78765689	+	Missense_Mutation	DNP	GT	GT	AC	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	GT	GT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	108	49	116	1	0	0	0	0	0
ZNF573	126231	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	38230139	38230140	+	Nonsense_Mutation	DNP	CC	CC	AA	novel		TCGA-G7-6797-01A-11D-1961-08	TCGA-G7-6797-10A-01D-1962-08	CC	CC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	b1bd2e14-32b6-4c57-bad1-59c0591876c2	5df531ff-b58f-4f9b-8103-b154da29a87c	296	132	274	0	0	0	0	0	0
