Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	NormalRefReads_WU	NormalVarReads_WU	NormalVAF_WU	TumorRefReads_WU	TumorVarReads_WU	TumorVAF_WU	RNARefReads_WU	RNAVarReads_WU	RNAVAF_WU
DNMT3A	0	genome.wustl.edu	36	2	25310746	25310746	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2809-03D-01W-0755-09	TCGA-AB-2809-11D-01W-0755-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	d86f567d-84f8-4a95-af1d-5a26ada92830	158c65f7-cfad-4a5f-a81b-9d869cd45ac3	2	25310746	25310746	C	T	SNP	DNMT3A	NM_022552.3	human	genbank	54_36p	-1	reviewed	missense	c.2645	p.R882H	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_PWWP,HMMSmart_SM00293,HMMPfam_DNA_methylase,superfamily_FYVE/PHD zinc finger,PatternScan_C5_MTASE_1,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_Tudor/PWWP/MBT	-	no_errors	906	223	19.70	65	41	38.32	NA	NA	NA
STEAP2	0	genome.wustl.edu	36	7	89694251	89694251	+	Nonsense_Mutation	SNP	C	C	T			TCGA-AB-2809-03D-01W-0755-09	TCGA-AB-2809-11D-01W-0755-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	d86f567d-84f8-4a95-af1d-5a26ada92830	158c65f7-cfad-4a5f-a81b-9d869cd45ac3	7	89694251	89694251	C	T	SNP	STEAP2	NM_001040665.1	human	genbank	54_36p	+1	reviewed	nonsense	c.523	p.R175*	0.992	HMMPfam_F420_oxidored,superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_F420_oxidored,HMMPfam_Ferric_reduct,superfamily_NAD(P)-binding Rossmann-fold domains	-	no_errors	135	5	3.55	126	49	27.84	NA	NA	NA
NIN	0	genome.wustl.edu	36	14	50293976	50293976	+	Silent	SNP	T	T	C			TCGA-AB-2809-03D-01W-0755-09	TCGA-AB-2809-11D-01W-0755-09	T	T	T	C	T	T	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	d86f567d-84f8-4a95-af1d-5a26ada92830	158c65f7-cfad-4a5f-a81b-9d869cd45ac3	14	50293976	50293976	T	C	SNP	NIN	NM_020921.3	human	genbank	54_36p	-1	reviewed	silent	c.3522	p.E1174	0.902	NULL	HMMPfam_efhand,superfamily_EF-hand	-	no_errors	202	16	7.34	124	66	34.55	NA	NA	NA
NAPSA	0	genome.wustl.edu	36	19	55554088	55554088	+	Missense_Mutation	SNP	C	C	T			TCGA-AB-2809-03D-01W-0755-09	TCGA-AB-2809-11D-01W-0755-09	C	C	C	T	C	C	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	d86f567d-84f8-4a95-af1d-5a26ada92830	158c65f7-cfad-4a5f-a81b-9d869cd45ac3	19	55554088	55554088	C	T	SNP	NAPSA	NM_004851.1	human	genbank	54_36p	-1	reviewed	missense	c.1027	p.V343I	1.000	HMMPfam_Asp,superfamily_Pept_Aspartic	HMMPfam_Asp,PatternScan_ASP_PROTEASE,superfamily_Pept_Aspartic	-	no_errors	2523	74	2.85	73	30	29.13	NA	NA	NA
NPM1	0	genome.wustl.edu	36	5	170770148	170770149	+	Frame_Shift_Ins	INS	-	-	TCTG			TCGA-AB-2809-03D-01W-0755-09	TCGA-AB-2809-11D-01W-0755-09	-	-	-	TCTG	-	-	Verified	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq	1	dbGAP	Illumina HiSeq	d86f567d-84f8-4a95-af1d-5a26ada92830	158c65f7-cfad-4a5f-a81b-9d869cd45ac3	5	170770148	170770149	-	TCTG	INS	NPM1	NM_002520.1	human	genbank	54_36p	+1	validated	frame_shift_ins	c.859_860	p.W288fs	1.000:1.000	NULL	HMMPfam_Nucleoplasmin,superfamily_Nucleoplasmin-like core domain	-	no_errors	NA	NA	NA	NA	NA	NA	NA	NA	NA
