Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	dataset	type	classification	start	end	gene	chr	ref_allele	tum_allele1	tum_allele2	context
SPEN	23013	broad.mit.edu	36	1	16132924	16132924	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10			G	C	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Silent	SNP	16132924	16132924	SPEN	1	G	G	C	45
CLCNKA	1187	broad.mit.edu	36	1	16232309	16232309	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	16232309	16232309	CLCNKA	1	A	A	C	7
CACNA1C	775	broad.mit.edu	36	12	2658978	2658978	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10			G	A	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Silent	SNP	2658978	2658978	CACNA1C	12	G	G	A	39
ARF6	382	broad.mit.edu	36	14	49430725	49430725	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	49430725	49430725	ARF6	14	A	A	G	1
SPTB	6710	broad.mit.edu	36	14	64329966	64329966	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	64329966	64329966	SPTB	14	G	G	A	46
BAHCC1	57597	broad.mit.edu	36	17	77045297	77045297	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	77045297	77045297	BAHCC1	17	G	G	T	35
MUC16	94025	broad.mit.edu	36	19	8927447	8927447	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10			G	C	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	8927447	8927447	MUC16	19	G	G	C	33
COL5A3	50509	broad.mit.edu	36	19	9952504	9952504	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10			G	A	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	9952504	9952504	COL5A3	19	G	G	A	42
ZNF507	22847	broad.mit.edu	36	19	37536140	37536140	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	37536140	37536140	ZNF507	19	C	C	T	21
MEGF8	1954	broad.mit.edu	36	19	47546353	47546353	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	47546353	47546353	MEGF8	19	C	C	T	31
PPP6R1	22870	broad.mit.edu	36	19	60439947	60439947	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	60439947	60439947	PPP6R1	19	C	C	T	29
FZD7	8324	broad.mit.edu	36	2	202608783	202608783	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	202608783	202608783	FZD7	2	G	G	A	38
NOP56	10528	broad.mit.edu	36	20	2584148	2584148	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	2584148	2584148	NOP56	20	G	G	A	44
XIRP1	165904	broad.mit.edu	36	3	39204122	39204122	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10			C	T	C	C	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	39204122	39204122	XIRP1	3	C	C	T	26
DUSP7	1849	broad.mit.edu	36	3	52059944	52059944	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10			G	A	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	52059944	52059944	DUSP7	3	G	G	A	37
HADH	3033	broad.mit.edu	36	4	109174914	109174914	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	109174914	109174914	HADH	4	G	G	A	33
SFRP2	6423	broad.mit.edu	36	4	154922237	154922237	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10			G	A	G	G	Unknown	Valid	Somatic	x	x	Sequenom_PCR_WGA			x	Broad	Missense_Mutation	SNP	154922237	154922237	SFRP2	4	G	G	A	37
TMEM200A	114801	broad.mit.edu	36	6	130804293	130804293	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	130804293	130804293	TMEM200A	6	C	C	G	28
PCLO	27445	broad.mit.edu	36	7	82423663	82423663	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Silent	SNP	82423663	82423663	PCLO	7	T	T	C	56
RBM28	55131	broad.mit.edu	36	7	127758150	127758150	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	127758150	127758150	RBM28	7	A	A	C	16
JPH1	56704	broad.mit.edu	36	8	75319448	75319448	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	75319448	75319448	JPH1	8	G	G	A	41
COLEC10	10584	broad.mit.edu	36	8	120187264	120187264	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	120187264	120187264	COLEC10	8	G	G	A	40
GTF3C4	9329	broad.mit.edu	36	9	134543966	134543966	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	x	x	---			x	Broad	Missense_Mutation	SNP	134543966	134543966	GTF3C4	9	A	A	G	16
TP53	7157	broad.mit.edu	36	17	7520099	7520099	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	Missense_Mutation	SNP	7520099	7520099	TP53	17	C	C	G	22
KIF26B	55083	broad.mit.edu	36	1	243832597	243832612	+	Frame_Shift_Del	DEL	CTTGTACGATCCCCTG	-	CTTGTACGATCCCCTG	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	Frame_Shift_Del	DEL	243832597	243832612	KIF26B	1	CTTGTACGATCCCCTG	-	CTTGTACGATCCCCTG	24
MYOF	26509	broad.mit.edu	36	10	95124664	95124665	+	Frame_Shift_Ins	INS	-	T	-	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10							Unknown	Unknown	Unknown	Phase_I	Capture	---			Illumina GAIIx	Broad	Frame_Shift_Ins	INS	95124664	95124665	MYOF	10	-	T	-	48
CDK12	51755	broad.mit.edu	36	17	34925519	34925520	+	Frame_Shift_Ins	INS	-	G	-	novel	Unknown	TCGA-20-0987-01	TCGA-20-0987-10			G	-	-	-	Unknown	Valid	Somatic	Phase_I	Capture				Illumina GAIIx	Broad	Frame_Shift_Ins	INS	34925519	34925520	CDK12	17	-	G	-	63
