Redactions
For TCGA data, redaction is the removal of cases from the data prior to publication or release. Redacted cases are generally rare, but cases must be redacted when the TSS/BCR subject link is incorrect ("unknown patient identity"), or in the case of genotype mismatch, completely wrong cancer, or completely wrong organ/tissue. Redaction occurs regardless of a case's analyte characterization or DCC data deposition status.
Rescission is the removal of samples from the list of redactions. This happens if the reason for redaction is eventually cleared up. For clarity, rescinded redactions do not appear in this report.
Table 1. Get Full Table
| Barcode | UUID | Date | Type | Category | Notes |
|---|---|---|---|---|---|
| TCGA-A7-A0DC | cb9f5e50-f49d-4899-8895-9367afcc1015 | 01/25/2011 | BRCA | Tumor type incorrect | DCIS and not invasive breast carcinoma from Jay Bowen/NWCH |
| TCGA-A7-A0DC | cb9f5e50-f49d-4899-8895-9367afcc1015 | 12/14/2010 | BRCA | Tumor type incorrect | Redaction due to incorrect type of tumor being submitted. |
| TCGA-AN-A0FE | e4321d99-ed3b-4fc8-b016-2ff47d93a064 | 10/28/2010 | BRCA | Subject identity unknown | Identical subject to TCGA-AN-A0FG |
| TCGA-AN-A0FG | 51d991f6-d998-420e-9357-48736c9ea0c1 | 10/28/2010 | BRCA | Subject identity unknown | Identical subject to TCGA-AN-A0FE |
| TCGA-AR-A0U1-01A-11R-A114-13 | acd25a3b-1975-45a6-acdf-6433eecc05ae | 01/25/2013 | BRCA | Biospecimen identity unknown | RNA aliquot UUID: acd25a3b-1975-45a6-acdf-6433eecc05ae was found to have inconclusive identity (RNA only). There is no replacement aliquot for this UUID. |
| TCGA-AR-A0U1-01A-11R-A115-07 | 3450eaab-777a-46ab-9d13-8e0783c4a686 | 01/25/2013 | BRCA | Biospecimen identity unknown | RNA aliquot UUID: 3450eaab-777a-46ab-9d13-8e0783c4a686 was found to have inconclusive identity (RNA only). There is no replacement aliquot for this UUID. |
| TCGA-BH-A0B2 | 57a1604c-60b7-4b30-a75e-f70939532c5c | 01/25/2011 | BRCA | Genotype mismatch | Normal tissue identity mismatch from Jay Bowen/NWCH |
| TCGA-BH-A0B2 | 57a1604c-60b7-4b30-a75e-f70939532c5c | 05/01/2013 | BRCA | Genotype mismatch | This duplicates annot id 1233. It was issued to engage automatic nonviewability of related data. |
| TCGA-BH-A0HL-01A-11R-A034-07 | (none) | 01/21/2013 | BRCA | Tumor type incorrect | RNA aliquot UUID: 791dd985-420e-46a0-a770-ebaf0d2beaf1 was incorrectly assigned this barcode. The correct tcgaBarcode is TCGA-C4-A0F1-01A-11R-A034-07. |
| TCGA-BH-A0HL-01A-11R-A035-13 | (none) | 01/21/2013 | BRCA | Tumor type incorrect | NA |
| TCGA-BH-A0HN-01A-11R-A084-07 | (none) | 01/21/2013 | BRCA | Tumor type incorrect | RNA aliquot UUID: c0ccb685-0789-4559-9189-05b841173aff was incorrectly assigned this barcode. The correct tcgaBarcode is TCGA-C4-A0F7-01A-11R-A084-07. |
| TCGA-BH-A0HN-01A-11R-A085-13 | (none) | 01/21/2013 | BRCA | Tumor type incorrect | NA |
| TCGA-E2-A1IP | 826d8224-55fe-48c7-a5fe-ad81ac1ebba3 | 06/15/2011 | BRCA | Genotype mismatch | Tumor and normal do not match |
| TCGA-E9-A1NC-01A-12R-A156-13 | fc5854f7-4865-468e-806b-7b1426b72889 | 01/25/2013 | BRCA | Biospecimen identity unknown | RNA aliquot UUID: fc5854f7-4865-468e-806b-7b1426b72889 was found to have inconclusive identity (RNA only). There is no replacement aliquot for this UUID. |
| TCGA-E9-A1NC-01A-12R-A157-07 | 60770e58-3b35-4222-97e9-d92e973f0203 | 01/25/2013 | BRCA | Biospecimen identity unknown | RNA aliquot UUID: 60770e58-3b35-4222-97e9-d92e973f0203 found to have inconclusive identity (RNA only). Replacement aliquot (TCGA-E9-A1NC-01A-21R-Full Aliquot ID will be updated when it ships) will ship to UNC ~1/30/2013. |