Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
A2ML1	144568	broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	8990976	8990976	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	A2ML1	NM_144670	exon9	c.C900T	p.T300T	.	.	111	50	197	1	.	93
AASDH	132949	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	57250311	57250311	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	AASDH	NM_181806	exon2	c.A155T	p.H52L	.	.	235	92	253	0	.	94
ABCA1	19	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	107599794	107599794	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ABCA1	NM_005502	exon10	c.T1109C	p.I370T	.	.	65	28	70	1	.	1016
ABCA12	26154	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	215833480	215833480	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ABCA12	NM_173076	exon38	c.T5742C	p.D1914D	.	.	122	44	109	0	.	99
ABCA12	26154	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	215914355	215914355	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ABCA12	NM_173076	exon6	c.T688A	p.S230T	.	.	95	43	111	0	.	99
ABCA13	154664	ucsc.edu;bcgsc.ca	37	7	48634410	48634410	+	Splice_Site	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ABCA13	NM_152701	exon58	c.14744+1G>A	.	.	.	182	73	214	2	.	521
ABCA4	24	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	94568641	94568641	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ABCA4	NM_000350	exon5	c.T500G	p.L167R	.	.	97	33	113	0	.	162
ABCC4	10257	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	95858957	95858957	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ABCC4	NM_005845	exon8	c.C990A	p.I330I	.	.	120	58	168	0	.	515
ABCC5	10057	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	183689367	183689367	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ABCC5	NM_005688	exon11	c.A1745T	p.D582V	.	.	52	21	108	0	.	137
ABLIM2	84448	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	8029484	8029484	+	Splice_Site	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ABLIM2	NM_001130083	exon13	c.1267+2T>A	.	.	.	121	42	106	0	.	47
ACAP2	23527	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	195112843	195112843	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ACAP2	NM_012287	exon2	c.A87T	p.A29A	.	.	775	294	806	1	.	136
ACE	1636	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	61566056	61566056	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ACE	NM_000789	exon16	c.T2353G	p.W785G	.	.	70	29	68	0	.	94
ACOXL	55289	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	111556610	111556610	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ACOXL	NM_001142807	exon7	c.T480A	p.V160V	.	.	118	62	115	0	.	90
ACPP	55	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	132075574	132075574	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ACPP	NM_001099	exon10	c.A1013T	p.E338V	.	.	99	26	158	0	.	91
ACR	49	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	51178223	51178223	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ACR	NM_001097	exon3	c.T383C	p.I128T	.	.	126	58	156	0	.	90
ACSM5	54988	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	16	20432662	20432663	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ACSM5	NM_017888	exon5	c.706_707insC	p.A236fs	.	.	66	29	86	0	.	70
ADAM22	53616	bcgsc.ca	37	7	87782583	87782583	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	ADAM22_ENST00000315984,NS,carcinoma,0	ADAM22	NM_021722	exon21	c.G1729T	p.G577W	.	.	174	75	230	5	.	230
ADAMTS13	11093	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	136324153	136324153	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ADAMTS13	NM_139025	exon29	c.T4135C	p.W1379R	.	.	136	60	193	2	.	229
ADAMTS16	170690	broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	5242253	5242253	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ADAMTS16	NM_139056	exon17	c.A2611T	p.S871C	.	.	45	19	74	1	.	275
ADAMTS19	171019	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	128863439	128863439	+	Splice_Site	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ADAMTS19	NM_133638	exon5	c.1069-2A>T	.	.	.	247	104	315	1	.	295
ADAMTS2	9509	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	178548746	178548746	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ADAMTS2	NM_014244	exon21	c.A3094T	p.I1032F	.	.	67	23	84	0	.	228
ADAMTS7	11173	broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	79080627	79080627	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ADAMTS7	NM_014272	exon8	c.C1268T	p.A423V	.	.	84	41	121	1	.	226
ADAMTS7	11173	broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	79080629	79080629	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ADAMTS7	NM_014272	exon8	c.C1266T	p.D422D	.	.	85	41	120	1	.	226
ADCY5	111	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	123051454	123051454	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ADCY5	NM_183357	exon4	c.T1475A	p.M492K	.	.	141	50	173	2	.	94
ADCY8	114	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	131955635	131955635	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ADCY8	NM_001115	exon4	c.C1315T	p.L439F	.	.	175	77	116	0	.	157
ADNP2	22850	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	77896097	77896097	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ADNP2	NM_014913	exon4	c.A2801G	p.H934R	.	.	78	31	57	0	.	140
ADRA1B	147	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	159344340	159344340	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ADRA1B	NM_000679	exon1	c.G428A	p.R143H	.	.	56	25	60	0	.	522
ADRBK1	156	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	67047308	67047308	+	Splice_Site	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ADRBK1	NM_001619	exon6	c.442-2A>T	.	.	.	176	80	94	0	.	521
ADTRP	84830	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	11768527	11768527	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001143948	exon3	c.C297T	p.A99A	.	.	262	57	162	1	.	.
AFF2	2334	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	147743516	147743516	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	AFF2	NM_002025	exon3	c.A268G	p.N90D	.	.	394	176	248	0	.	135
AFMID	125061	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	76183458	76183458	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	AFMID	NM_001145526	exon1	c.G7C	p.D3H	.	.	100	43	107	1	.	136
AGAP3	116988	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	150839513	150839513	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	AGAP3	NM_031946	exon16	c.A2065T	p.S689C	.	.	76	9	110	0	.	92
AGPAT5	55326	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	6612657	6612657	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	AGPAT5	NM_018361	exon7	c.G831A	p.M277I	.	.	294	20	540	0	.	90
AGTPBP1	23287	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	9	88292376	88292376	+	Silent	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	AGTPBP1	NM_015239	exon6	c.T411G	p.S137S	.	.	122	6	110	0	.	158
AKNAD1	254268	broad.mit.edu	37	1	109369904	109369904	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	AKNAD1	NM_152763	exon11	c.A1859G	p.K620R	.	.	87	3	115	0	.	93
ALDH1A3	220	broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	101438327	101438327	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ALDH1A3	NM_000693	exon8	c.C820T	p.L274L	.	.	165	22	181	1	.	651
ALOX12B	242	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	7989531	7989531	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ALOX12B	NM_001139	exon2	c.A155T	p.Q52L	.	.	74	33	102	0	.	226
ALS2	57679	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	202593826	202593826	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ALS2	NM_020919	exon14	c.G2661A	p.K887K	.	.	162	86	180	0	.	275
ALS2CR11	151254	bcgsc.ca	37	2	202400648	202400648	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ALS2CR11	NM_001168217	exon13	c.T1602A	p.A534A	.	.	28	12	33	0	.	155
ANK3	288	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	61829030	61829030	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ANK3	NM_020987	exon37	c.C11609A	p.T3870N	.	.	354	202	252	0	.	107
ANKRD26	22852	broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	27306632	27306632	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ANKRD26	NM_014915	exon30	c.A4305G	p.L1435L	.	.	159	93	96	1	.	138
ANKRD32	84250	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	93989111	93989111	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ANKRD32	NM_032290	exon8	c.A1017T	p.I339I	.	.	449	201	488	0	.	92
ANKRD50	57182	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	125592808	125592808	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ANKRD50	NM_020337	exon4	c.G1624T	p.D542Y	.	.	141	58	144	1	.	90
ANKRD66	100287718	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	46721651	46721651	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001162435	exon4	c.T521A	p.I174N	.	.	190	101	95	0	.	.
ANO8	57719	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	17441186	17441186	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ANO8	NM_020959	exon9	c.T1121C	p.L374P	.	.	74	31	92	0	.	93
APEX2	27301	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	55033578	55033578	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	APEX2	NM_014481	exon6	c.A1267T	p.T423S	.	.	86	62	124	0	.	659
APLP1	333	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	36370026	36370026	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	APLP1	NM_001024807	exon16	c.C1764A	p.I588I	.	.	21	9	44	0	.	92
APOB	338	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	21229513	21229513	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	APOB	NM_000384	exon26	c.T10227A	p.S3409R	.	.	109	48	103	0	.	175
ARC	23237	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	143694546	143694546	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ARC	NM_015193	exon1	c.G1087T	p.A363S	.	.	86	36	53	0	.	135
ARFIP1	27236	ucsc.edu;bcgsc.ca	37	4	153802126	153802126	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ARFIP1	NM_001025595	exon6	c.G423T	p.Q141H	.	.	353	136	398	3	.	91
ARHGAP21	57584	ucsc.edu;bcgsc.ca;mdanderson.org	37	10	25010790	25010790	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ARHGAP21	NM_020824	exon2	c.T39C	p.D13D	.	.	246	153	216	3	.	235
ARHGAP23	57636	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	36619393	36619393	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ARHGAP23	NM_001199417	exon5	c.C384A	p.V128V	.	.	107	39	136	0	.	205
ARHGAP5	394	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	32560362	32560362	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ARHGAP5	NM_001173	exon2	c.A487G	p.I163V	.	.	95	50	104	1	.	94
ARHGEF15	22899	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	8215862	8215862	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ARHGEF15	NM_025014	exon2	c.G505C	p.D169H	.	.	38	14	39	0	.	230
ARHGEF4	50649	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	131803692	131803692	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ARHGEF4	NM_015320	exon14	c.T2003C	p.L668P	.	.	50	13	57	0	.	292
ARHGEF7	8874	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	111938504	111938504	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ARHGEF7	NM_001113511	exon18	c.A2024G	p.K675R	.	.	78	8	80	0	.	232
ARL6IP1	23204	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	16	18810100	18810100	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ARL6IP1	NM_015161	exon2	c.G93A	p.L31L	.	.	120	48	132	0	.	90
ARVCF	421	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	22	19969151	19969151	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ARVCF	NM_001670	exon5	c.A479G	p.D160G	.	.	38	19	44	0	.	91
ASAH1	427	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	17933073	17933073	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ASAH1	NM_001127505	exon2	c.A150T	p.S50S	.	.	65	55	141	0	.	90
ASB5	140458	ucsc.edu;bcgsc.ca	37	4	177142394	177142394	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ASB5	NM_080874	exon5	c.T582C	p.V194V	.	.	413	169	461	4	.	228
ASIC4	55515	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	220396495	220396495	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_182847	exon2	c.G979T	p.G327W	.	.	292	113	409	1	.	.
ASTN1	460	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	176927577	176927577	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ASTN1	NM_004319	exon10	c.G1640A	p.S547N	.	.	278	72	206	0	.	319
ASXL1	171023	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	20	31023559	31023580	+	Frame_Shift_Del	DEL	AGGCTGACACTAGAGAAGCTGC	AGGCTGACACTAGAGAAGCTGC	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	AGGCTGACACTAGAGAAGCTGC	AGGCTGACACTAGAGAAGCTGC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ASXL1	NM_015338	exon12	c.3044_3065del	p.1015_1022del	.	.	61	24	75	0	.	2057
ASZ1	136991	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	117003770	117003770	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ASZ1	NM_130768	exon13	c.T1308C	p.H436H	.	.	85	26	73	0	.	515
ATP2C2	9914	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	84459339	84459339	+	Splice_Site	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ATP2C2	NM_014861	exon11	c.920-2A>T	.	.	.	168	64	152	0	.	91
ATP6V1F	9296	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	7	128505618	128505618	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ATP6V1F	NM_001198909	exon3	c.G430T	p.E144X	.	.	64	27	79	0	.	91
ATPBD4	89978	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	35830633	35830633	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ATPBD4	NM_001141972	exon3	c.A154T	p.T52S	.	.	157	70	151	0	.	90
AVPR1B	553	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	206230897	206230897	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	AVPR1B	NM_000707	exon2	c.C1030A	p.H344N	.	.	257	72	138	0	.	569
AZI1	22994	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	79170793	79170793	+	Silent	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	AZI1	NM_014984	exon14	c.G1710C	p.V570V	.	.	240	109	240	0	.	136
B3GALNT1	8706	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	160803874	160803874	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	B3GALNT1	NM_001038628	exon8	c.T669C	p.H223H	.	.	69	25	84	0	.	91
B4GALNT3	283358	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	666812	666812	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	B4GALNT3	NM_173593	exon16	c.G2419T	p.D807Y	.	.	147	54	165	0	.	92
BAI1	575	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	143558633	143558633	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BAI1	NM_001702	exon4	c.T1216G	p.C406G	.	.	54	10	42	0	.	1129
BANK1	55024	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	102783820	102783820	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BANK1	NM_017935	exon4	c.A762T	p.L254F	.	.	157	64	192	0	.	93
BCAT2	587	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	49309901	49309901	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BCAT2	NM_001190	exon3	c.G173C	p.G58A	.	.	60	22	60	0	.	91
BDKRB2	624	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	96707662	96707662	+	Missense_Mutation	SNP	G	G	T	rs201791629	alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BDKRB2	NM_000623	exon3	c.G997T	p.V333L	.	.	99	44	117	0	.	662
BICD1	636	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	32369200	32369200	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BICD1	NM_001714	exon2	c.C233G	p.S78C	.	.	150	58	163	0	.	153
BICD1	636	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	32490444	32490444	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BICD1	NM_001714	exon7	c.A2264G	p.Y755C	.	.	114	50	130	0	.	153
BICD2	23299	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	95477644	95477644	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BICD2	NM_001003800	exon7	c.A2360T	p.Q787L	.	.	81	35	85	0	.	226
BOC	91653	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	112993376	112993376	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BOC	NM_033254	exon9	c.A1389T	p.P463P	.	.	129	61	182	0	.	157
BRDT	676	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	92428482	92428482	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BRDT	NM_001242806	exon2	c.T171C	p.D57D	.	.	128	46	124	0	.	374
BRIX1	55299	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	34922851	34922851	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BRIX1	NM_018321	exon6	c.G488A	p.R163Q	.	.	381	136	419	0	.	90
BRPF3	27154	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	36169160	36169160	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BRPF3	NM_015695	exon2	c.A1061C	p.Q354P	.	.	131	21	89	0	.	92
BTBD11	121551	broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	108008836	108008836	+	Splice_Site	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BTBD11	NM_001018072	exon7	c.1900-2A>C	.	.	.	112	46	151	1	.	93
BTF3	689	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	72798773	72798773	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BTF3	NM_001037637	exon4	c.C348A	p.I116I	.	.	36	15	42	0	.	90
BZRAP1	9256	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	56384317	56384317	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	BZRAP1	NM_004758	exon25	c.A4996G	p.K1666E	.	.	43	17	48	0	.	229
C11orf65	160140	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	108264018	108264018	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C11orf65	NM_152587	exon7	c.T648C	p.A216A	.	.	211	80	310	2	.	91
C16orf62	57020	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	19640035	19640035	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C16orf62	NM_020314	exon17	c.A1727C	p.N576T	.	.	82	26	107	0	.	69
C16orf93	90835	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	30771751	30771751	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C16orf93	NM_001195620	exon4	c.T323A	p.L108Q	.	.	98	35	115	0	.	90
C16orf96	342346	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	4625242	4625242	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001145011	exon5	c.A761T	p.Q254L	.	.	26	6	31	0	.	.
C1orf101	257044	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	244681971	244681971	+	Silent	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C1orf101	NM_173807	exon8	c.T507G	p.V169V	.	.	623	137	387	0	.	154
C1orf173	127254	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	75039093	75039093	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C1orf173	NM_001002912	exon14	c.T2301C	p.Y767Y	.	.	102	43	130	1	.	94
C1orf227	149643	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	213009317	213009317	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C1orf227	NM_001024601	exon2	c.A175C	p.T59P	.	.	302	213	204	1	.	514
C1orf94	84970	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	34663030	34663030	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C1orf94	NM_001134734	exon2	c.A525T	p.R175S	.	.	104	46	88	0	.	90
C20orf194	25943	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	3274839	3274839	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C20orf194	NM_001009984	exon25	c.T2184C	p.P728P	.	.	61	26	61	1	.	68
C20orf26	26074	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	20144825	20144825	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C20orf26	NM_015585	exon11	c.T1158A	p.A386A	.	.	60	19	77	0	.	94
C20orf26	26074	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	20269371	20269371	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C20orf26	NM_015585	exon23	c.T2915C	p.I972T	.	.	166	66	218	0	.	94
C2orf81	388963	hgsc.bcm.edu	37	2	74642265	74642266	+	In_Frame_Ins	INS	-	-	CGCGGAGGGGCGGGTGGCGCCGCC	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001145054	exon4	c.958_959insGGCGGCGCCACCCGCCCCTCCGCG	p.S320delinsGGATRPSAS	.	.	47	31	70	0	.	.
C3orf30	152405	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	118865983	118865983	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C3orf30	NM_152539	exon1	c.A947G	p.E316G	.	.	136	57	130	0	.	92
C3orf36	80111	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	133647332	133647332	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C3orf36	NM_025041	exon1	c.T316C	p.C106R	.	.	134	45	175	0	.	91
C3orf58	205428	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	143708572	143708572	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C3orf58	NM_173552	exon3	c.G1182A	p.R394R	.	.	142	69	140	2	.	91
C5orf22	55322	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	31534522	31534522	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C5orf22	NM_018356	exon2	c.T225C	p.F75F	.	.	92	23	111	0	.	92
C5orf42	65250	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	37206332	37206332	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C5orf42	NM_023073	exon17	c.A3116T	p.Q1039L	.	.	306	30	343	0	.	94
C6orf25	80739	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	31691511	31691511	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C6orf25	NM_138277	exon2	c.T157C	p.C53R	.	.	90	16	75	1	.	90
C6orf47	57827	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	6	31627616	31627616	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C6orf47	NM_021184	exon1	c.G109T	p.E37X	.	.	247	47	163	0	.	91
C9orf50	375759	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	9	132375462	132375471	+	Frame_Shift_Del	DEL	GAACAGAAGG	GAACAGAAGG	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	GAACAGAAGG	GAACAGAAGG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	C9orf50	NM_199350	exon6	c.1103_1112del	p.368_371del	.	.	87	25	106	0	.	91
CABP4	57010	broad.mit.edu	37	11	67223820	67223820	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CABP4	NM_145200	exon3	c.A448T	p.S150C	.	.	145	5	75	0	.	90
CABP5	56344	broad.mit.edu;bcgsc.ca	37	19	48537602	48537602	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CABP5	NM_019855	exon5	c.T366A	p.D122E	.	.	75	5	103	0	.	91
CACNA1B	774	broad.mit.edu	37	9	140773571	140773571	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CACNA1B	NM_001243812	exon2	c.A350T	p.H117L	.	.	52	15	48	0	.	138
CACNA1D	776	hgsc.bcm.edu;broad.mit.edu	37	3	53700544	53700544	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CACNA1D	NM_001128840	exon7	c.G1098A	p.W366X	.	.	128	6	123	0	.	100
CACNA1E	777	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	181753861	181753861	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CACNA1E	NM_001205293	exon41	c.C5535A	p.H1845Q	.	.	202	42	152	0	.	95
CACNA2D1	781	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	81714106	81714106	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CACNA2D1	NM_000722	exon7	c.G637T	p.G213C	.	.	263	114	302	0	.	96
CALU	813	ucsc.edu	37	7	128394434	128394434	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CALU	NM_001199671	exon4	c.A364T	p.K122X	.	.	117	44	110	2	.	90
CAMK2N1	55450	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	20811760	20811760	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CAMK2N1	NM_018584	exon1	c.C113G	p.A38G	.	.	46	17	47	0	.	93
CAMKMT	79823	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	44933426	44933426	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CAMKMT	NM_024766	exon5	c.G438A	p.R146R	.	.	90	40	94	0	.	90
CAMSAP2	23271	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	200817745	200817745	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_203459	exon11	c.A1848T	p.S616S	.	.	219	42	80	0	.	.
CAND2	23066	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	12858225	12858225	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CAND2	NM_001162499	exon10	c.T1794A	p.L598L	.	.	123	105	149	1	.	72
CARD11	84433	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	2968233	2968233	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CARD11	NM_032415	exon13	c.A1753T	p.S585C	.	.	28	9	30	0	.	870
CARTPT	9607	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	71016426	71016426	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CARTPT	NM_004291	exon3	c.T335C	p.L112P	.	.	88	42	114	0	.	91
CASC1	55259	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	12	25267703	25267703	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CASC1	NM_001082972	exon13	c.C1672T	p.Q558X	.	.	113	45	165	0	.	92
CATSPERB	79820	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	92126218	92126218	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CATSPERB	NM_024764	exon15	c.T1395C	p.F465F	.	.	34	13	52	0	.	138
CC2D1A	54862	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	14029727	14029727	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CC2D1A	NM_017721	exon10	c.G1021T	p.V341L	.	.	167	64	211	0	.	90
CCDC105	126402	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	15122107	15122107	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCDC105	NM_173482	exon1	c.A470G	p.Q157R	.	.	73	26	58	0	.	91
CCDC135	84229	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	57760018	57760018	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCDC135	NM_032269	exon13	c.C1797A	p.P599P	.	.	239	115	294	0	.	90
CCDC136	64753	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	7	128434789	128434789	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCDC136	NM_001201372	exon4	c.G463T	p.E155X	.	.	222	83	314	1	.	24
CCDC136	64753	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	128450365	128450365	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCDC136	NM_022742	exon12	c.T1973G	p.L658W	.	.	158	69	149	0	.	24
CCDC144C	348254	ucsc.edu;bcgsc.ca	37	17	20294987	20294987	+	RNA	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	291	107	305	0	.	.
CCDC144C	348254	ucsc.edu;bcgsc.ca	37	17	20295802	20295802	+	RNA	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	354	121	448	6	.	.
CCDC178	374864	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	30554635	30554635	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001105528	exon21	c.T2399A	p.L800Q	.	.	43	15	48	0	.	.
CCDC36	339834	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	49293846	49293846	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCDC36	NM_001135197	exon8	c.T916C	p.W306R	.	.	67	59	89	1	.	92
CCDC80	151887	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	112358178	112358178	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCDC80	NM_199511	exon2	c.A575G	p.Q192R	.	.	130	63	126	0	.	92
CCDC83	220047	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	85622367	85622411	+	In_Frame_Del	DEL	TTCATGAACTGGAAGCAGAAAATTTGGTGCTTATTGATCAACTAT	TTCATGAACTGGAAGCAGAAAATTTGGTGCTTATTGATCAACTAT	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	TTCATGAACTGGAAGCAGAAAATTTGGTGCTTATTGATCAACTAT	TTCATGAACTGGAAGCAGAAAATTTGGTGCTTATTGATCAACTAT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCDC83	NM_173556	exon8	c.716_760del	p.239_254del	.	.	156	15	232	0	.	91
CCKBR	887	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	6292239	6292239	+	Splice_Site	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCKBR	NM_176875	exon5	c.812-2A>G	.	.	.	40	25	50	0	.	574
CCL14	6358	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	34311402	34311402	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCL14	NM_032962	exon3	c.A214G	p.N72D	.	.	98	38	111	0	.	90
CCL25	6370	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	8117950	8117950	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCL25	NM_001201359	exon2	c.T17A	p.L6Q	.	.	46	22	71	0	.	90
CCNF	899	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	2499281	2499281	+	Splice_Site	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCNF	NM_001761	exon12	c.1219-2A>T	.	.	.	60	25	82	0	.	658
CCSER1	401145	broad.mit.edu	37	4	91549185	91549185	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001145065	exon6	c.C1734A	p.S578S	.	.	281	7	277	0	.	.
CCSER1	401145	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	91229854	91229854	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001145065	exon2	c.A419G	p.E140G	.	.	126	56	131	0	.	.
CCT4	10575	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	62112155	62112155	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCT4	NM_001256721	exon2	c.G180C	p.M60I	.	.	105	51	124	0	.	92
CCT8	10694	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	30437364	30437364	+	Silent	SNP	A	A	C	rs143385323	byfrequency;alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CCT8	NM_006585	exon7	c.T687G	p.G229G	.	.	75	38	90	0	A|0.999;G|0.001	90
CD101	9398	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	117556093	117556093	+	Missense_Mutation	SNP	G	G	T	rs201304832	alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CD101	NM_001256109	exon4	c.G907T	p.V303F	.	.	108	42	136	0	G|0.999;A|0.001	94
CD200R1L	344807	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	112546319	112546319	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CD200R1L	NM_001008784	exon3	c.G325T	p.D109Y	.	.	170	63	183	1	.	91
CD22	933	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	35823773	35823773	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CD22	NM_001185100	exon3	c.A358T	p.R120W	.	.	76	26	89	0	.	526
CD69	969	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	9907785	9907785	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CD69	NM_001781	exon3	c.A260G	p.E87G	.	.	103	42	131	0	.	90
CDCA2	157313	broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	25319603	25319603	+	Missense_Mutation	SNP	G	G	T	rs149260399	alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CDCA2	NM_152562	exon4	c.G266T	p.R89L	.	.	53	40	120	1	G|1.000;A|0.000	90
CDCA7	83879	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	174230178	174230178	+	Splice_Site	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CDCA7	NM_031942	exon7	c.895-2A>C	.	.	.	65	34	80	0	.	91
CDHR1	92211	broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	85970915	85970915	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CDHR1	NM_001171971	exon13	c.T1479A	p.A493A	.	.	138	42	114	1	.	91
CDK2AP2	10263	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	67274928	67274928	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CDK2AP2	NM_005851	exon3	c.A221G	p.Y74C	.	.	215	102	147	1	.	90
CDK9	1025	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	130551623	130551623	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CDK9	NM_001261	exon7	c.A920T	p.D307V	.	.	82	38	87	1	.	521
CDON	50937	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	125891234	125891234	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CDON	NM_016952	exon3	c.T258C	p.S86S	.	.	58	17	82	0	.	158
CEACAM1	634	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	43013273	43013273	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CEACAM1	NM_001712	exon9	c.A1569G	p.V523V	.	.	126	61	154	0	.	515
CELF2	10659	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	11207586	11207586	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CELF2	NM_006561	exon2	c.G212A	p.G71E	.	.	115	69	91	0	.	90
CELSR2	1952	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	109801366	109801366	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CELSR2	NM_001408	exon2	c.G3623C	p.R1208P	.	.	57	25	74	0	.	526
CEP192	55125	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	18	13113583	13113583	+	Splice_Site	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CEP192	NM_032142	exon41	c.7048-2A>T	.	.	.	70	32	62	0	.	27
CHD8	57680	broad.mit.edu;bcgsc.ca	37	14	21861848	21861848	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CHD8	NM_001170629	exon31	c.C6106T	p.P2036S	.	.	78	29	99	2	.	277
CHD9	80205	broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	53337778	53337778	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CHD9	NM_025134	exon31	c.A5860T	p.N1954Y	.	.	185	82	208	1	.	272
CHRM5	1133	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	34355220	34355220	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CHRM5	NM_012125	exon3	c.T302G	p.L101R	.	.	138	54	172	0	.	91
CHSY3	337876	ucsc.edu;bcgsc.ca	37	5	129243821	129243821	+	Missense_Mutation	SNP	A	A	T	rs146180146	byfrequency	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CHSY3	NM_175856	exon2	c.A854T	p.Y285F	.	.	146	68	147	2	A|0.999;T|0.001	25
CHURC1-FNTB	100529261	broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	65527939	65527939	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001202559	exon14	c.T1406G	p.V469G	.	.	152	59	187	1	.	.
CIC	23152	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	42795109	42795109	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CIC	NM_015125	exon10	c.C2189G	p.S730W	.	.	104	46	109	0	.	591
CIT	11113	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	120271925	120271925	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CIT	NM_001206999	exon6	c.T624A	p.A208A	.	.	122	45	147	0	.	399
CLCN1	1180	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	143044041	143044041	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CLCN1	NM_000083	exon20	c.A2402T	p.E801V	.	.	64	30	118	0	.	156
CLEC14A	161198	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	38724410	38724410	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CLEC14A	NM_175060	exon1	c.G818A	p.C273Y	.	.	59	30	77	0	.	94
CLEC1B	51266	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	10147839	10147839	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CLEC1B	NM_016509	exon5	c.A445T	p.I149F	.	.	40	13	55	0	.	90
CLN6	54982	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	68504126	68504126	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CLN6	NM_017882	exon4	c.A373T	p.S125C	.	.	57	30	105	0	.	91
CLVS2	134829	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	123319264	123319264	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CLVS2	NM_001010852	exon2	c.T342C	p.Y114Y	.	.	76	28	95	0	.	27
CMAHP	8418	broad.mit.edu;ucsc.edu	37	6	25106452	25106452	+	RNA	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	46	12	28	0	.	.
CNGA4	1262	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	6262882	6262882	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CNGA4	NM_001037329	exon5	c.A1139T	p.D380V	.	.	88	34	133	1	.	91
CNTNAP4	85445	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	76509861	76509861	+	Missense_Mutation	SNP	G	G	A	rs150806968		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CNTNAP4	NM_138994	exon10	c.G1462A	p.G488S	.	.	75	29	112	0	G|1.000;A|0.000	70
COASY	80347	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	40715081	40715081	+	Silent	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	COASY	NM_001042532	exon3	c.G528C	p.L176L	.	.	106	52	121	1	.	115
COG1	9382	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	71196782	71196782	+	Missense_Mutation	SNP	G	G	A	rs149528257	byfrequency	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	COG1	NM_018714	exon6	c.G1148A	p.R383Q	.	.	123	54	143	1	G|1.000;A|0.000	91
COL11A1	1301	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	103453234	103453234	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	COL11A1	NM_080629	exon30	c.A2493T	p.A831A	.	.	91	35	113	0	.	586
COL1A2	1278	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	94040245	94040245	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	COL1A2	NM_000089	exon22	c.T1242C	p.A414A	.	.	66	25	113	0	.	521
COL20A1	57642	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	61947981	61947981	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	COL20A1	NM_020882	exon21	c.T2601C	p.S867S	.	.	38	16	77	0	.	90
COL22A1	169044	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	139705929	139705929	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	COL22A1	NM_152888	exon35	c.A2714C	p.Q905P	.	.	133	32	73	0	.	103
COL4A2	1284	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	111158834	111158834	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	COL4A2	NM_001846	exon46	c.T4475A	p.L1492Q	.	.	272	29	325	1	.	95
COL4A4	1286	bcgsc.ca	37	2	227917051	227917051	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	COL4A4	NM_000092	exon32	c.C2938A	p.P980T	.	.	92	36	106	3	.	142
COL4A4	1286	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	227886777	227886777	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	COL4A4	NM_000092	exon44	c.C4203T	p.G1401G	.	.	247	105	240	1	.	142
COL4A6	1288	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	107464587	107464587	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	COL4A6	NM_001847	exon4	c.T165C	p.I55I	.	.	153	73	89	0	.	199
COL6A6	131873	broad.mit.edu	37	3	130285963	130285963	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	COL6A6	NM_001102608	exon4	c.T1700G	p.V567G	.	.	164	4	188	0	.	76
COL6A6	131873	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	130290136	130290136	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	COL6A6	NM_001102608	exon6	c.T2876G	p.M959R	.	.	193	80	240	0	.	76
COLGALT2	23127	bcgsc.ca	37	1	183908097	183908097	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_015101	exon12	c.C1679T	p.T560M	.	.	472	321	277	2	.	.
COX3	5742	broad.mit.edu;bcgsc.ca	37	MT	9921	9921	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	ENST00000362079	exon1	c.G715A	p.A239T	.	.	49	46	19	0	.	.
CPEB1	64506	broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	83226572	83226572	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CPEB1	NM_030594	exon4	c.A544T	p.S182C	.	.	117	54	161	1	.	136
CPED1	79974	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	120781062	120781062	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001105533	exon14	c.G1881T	p.G627G	.	.	94	36	117	1	.	.
CR2	1380	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	207646133	207646133	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CR2	NM_001006658	exon10	c.A1587T	p.P529P	.	.	135	38	89	0	.	232
CRB2	286204	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	126133122	126133122	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CRB2	NM_173689	exon7	c.A1790T	p.E597V	.	.	32	7	28	1	.	91
CSHL1	1444	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	61987231	61987231	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CSHL1	NM_022579	exon5	c.T509A	p.L170H	.	.	150	71	137	0	.	90
CSMD1	64478	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	3889582	3889582	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CSMD1	NM_033225	exon4	c.T455A	p.L152Q	.	.	50	41	117	0	.	86
CSMD2	114784	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	34174805	34174805	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CSMD2	NM_052896	exon22	c.T3340C	p.F1114L	.	.	97	34	152	1	.	103
CSMD3	114788	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	113988150	113988150	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CSMD3	NM_198123	exon7	c.G1258T	p.A420S	.	.	316	145	150	0	.	1132
CSMD3	114788	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	8	113326785	113326785	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CSMD3	NM_198123	exon48	c.T7422A	p.Y2474X	.	.	354	83	184	0	.	1132
CSPP1	79848	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	67976717	67976717	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CSPP1	NM_024790	exon1	c.A84T	p.R28R	.	.	123	73	85	0	.	138
CTAG2	30848	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	153880820	153880820	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CTAG2	NM_020994	exon2	c.C355A	p.P119T	.	.	178	88	134	0	.	131
CTNNB1	1499	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	41266127	41266150	+	In_Frame_Del	DEL	ACAGCTCCTTCTCTGAGTGGTAAA	ACAGCTCCTTCTCTGAGTGGTAAA	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	ACAGCTCCTTCTCTGAGTGGTAAA	ACAGCTCCTTCTCTGAGTGGTAAA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	CTNNB1,NS,carcinoma,-1	CTNNB1	NM_001098209	exon3	c.124_147del	p.42_49del	.	.	130	63	196	0	.	24361
CTTNBP2	83992	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	117407202	117407202	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CTTNBP2	NM_033427	exon9	c.G2807T	p.G936V	.	.	76	32	72	0	.	94
CUL9	23113	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	43155101	43155101	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CUL9	NM_015089	exon6	c.T1505C	p.L502P	.	.	187	25	110	0	.	529
CYP2B7P1	1556	broad.mit.edu	37	19	41455083	41455083	+	RNA	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CYP2B7P1	.	.	.	.	.	.	56	28	96	2	.	70
CYTH2	9266	hgsc.bcm.edu	37	19	48978146	48978146	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	CYTH2	NM_017457	exon8	c.G748T	p.G250W	.	.	97	4	127	0	.	228
DACH2	117154	broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	85906101	85906101	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DACH2	NM_053281	exon4	c.A703T	p.N235Y	.	.	295	142	183	1	.	136
DACT2	168002	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	168709146	168709146	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DACT2	NM_214462	exon4	c.T1291A	p.C431S	.	.	123	55	112	0	.	226
DARC	2532	broad.mit.edu;bcgsc.ca	37	1	159176132	159176132	+	Silent	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DARC	NM_001122951	exon1	c.C909G	p.P303P	.	.	147	101	96	2	.	659
DARC	2532	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	159176146	159176146	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DARC	NM_001122951	exon1	c.T923C	p.L308P	.	.	160	37	104	0	.	659
DAZAP1	26528	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	19	1434882	1434882	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DAZAP1	NM_018959	exon12	c.G1195C	p.V399L	.	.	80	29	96	0	.	153
DBN1	1627	broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	176886227	176886227	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DBN1	NM_080881	exon12	c.T1004C	p.I335T	.	.	26	6	26	0	.	587
DBNL	28988	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	44096470	44096470	+	Missense_Mutation	SNP	C	C	A	rs145524590	alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DBNL	NM_001122956	exon5	c.C442A	p.R148S	.	.	90	13	81	0	C|1.000;T|0.000	91
DCAF10	79269	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	37861138	37861138	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DCAF10	NM_024345	exon7	c.G1313T	p.C438F	.	.	34	8	48	0	.	115
DCAF12L2	340578	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	125298937	125298937	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DCAF12L2	NM_001013628	exon1	c.G971T	p.G324V	.	.	185	85	115	1	.	113
DCC	1630	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	50923756	50923756	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DCC	NM_005215	exon18	c.A2767T	p.T923S	.	.	145	60	184	0	.	225
DCHS2	54798	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	155156385	155156385	+	Missense_Mutation	SNP	T	T	A	rs147174513		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DCHS2	NM_017639	exon25	c.A8054T	p.D2685V	.	.	101	44	94	0	T|1.000;A|0.000	94
DCHS2	54798	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	155226268	155226268	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DCHS2	NM_017639	exon16	c.A4011G	p.Q1337Q	.	.	95	37	99	0	.	94
DCN	1634	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	91546950	91546950	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DCN	NM_001920	exon6	c.T669A	p.L223L	.	.	82	37	100	0	.	555
DDX10	1662	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	108709284	108709284	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DDX10	NM_004398	exon14	c.G2077A	p.E693K	.	.	186	62	236	0	.	1145
DDX23	9416	ucsc.edu	37	12	49224989	49224989	+	Silent	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DDX23	NM_004818	exon16	c.T2175G	p.G725G	.	.	121	7	161	8	.	539
DENND2A	27147	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	140285439	140285439	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DENND2A	NM_015689	exon3	c.T1195C	p.L399L	.	.	134	51	144	0	.	138
DENND3	22898	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	142146872	142146872	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DENND3	NM_014957	exon2	c.C127A	p.P43T	.	.	98	51	68	1	.	91
DEPDC1B	55789	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	59899225	59899225	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DEPDC1B	NM_001145208	exon9	c.G1235T	p.R412I	.	.	69	22	81	0	.	91
DGAT1	8694	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	145540683	145540684	+	Splice_Site	INS	-	-	CC	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_012079	exon16	c.1248+2->GG	.	.	.	114	57	68	0	.	.
DGKD	8527	broad.mit.edu;bcgsc.ca	37	2	234368877	234368877	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DGKD	NM_152879	exon24	c.A2867C	p.Q956P	.	.	234	9	259	0	.	676
DGKK	139189	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	50125538	50125538	+	RNA	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DGKK	.	.	.	.	.	.	81	73	101	0	.	227
DHX9	1660	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	182836133	182836133	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DHX9	NM_001357	exon14	c.A1512T	p.G504G	.	.	167	35	117	0	.	92
DICER1	23405	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	95560494	95560494	+	Splice_Site	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DICER1	NM_177438	exon25	c.5096-1G>T	.	.	.	47	17	60	0	.	961
DIEXF	27042	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	210015611	210015611	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DIEXF	NM_014388	exon9	c.A1487G	p.H496R	.	.	163	44	93	0	.	91
DISC1	27185	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	231829654	231829654	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DISC1	NM_001164541	exon2	c.A150T	p.T50T	.	.	134	25	93	0	.	91
DLGAP5	9787	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	55629758	55629758	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DLGAP5	NM_014750	exon13	c.C1584G	p.I528M	.	.	47	14	72	0	.	92
DLL3	10683	bcgsc.ca	37	19	39994714	39994714	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DLL3	NM_016941	exon5	c.T656A	p.V219E	.	.	31	14	35	1	.	1083
DMBT1	1755	broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	124339354	124339354	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DMBT1	NM_007329	exon10	c.C940A	p.P314T	.	.	150	43	155	2	.	494
DNAH14	127602	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	225270296	225270296	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DNAH14	NM_001373	exon20	c.C3182T	p.T1061I	.	.	462	102	261	0	.	23
DNAH2	146754	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	7644139	7644139	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DNAH2	NM_020877	exon10	c.G1518A	p.R506R	.	.	52	18	51	0	.	102
DNAH2	146754	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	7660453	7660453	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DNAH2	NM_020877	exon12	c.T1949A	p.L650Q	.	.	73	29	146	0	.	102
DNAH7	56171	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	196729249	196729249	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DNAH7	NM_018897	exon41	c.A7130T	p.H2377L	.	.	143	67	165	2	.	102
DNAH7	56171	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	196913052	196913052	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DNAH7	NM_018897	exon4	c.A218T	p.E73V	.	.	59	25	61	0	.	102
DNAH8	1769	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	38994404	38994404	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DNAH8	NM_001206927	exon92	c.T13797A	p.V4599V	.	.	81	20	61	0	.	615
DNAH8	1769	ucsc.edu;bcgsc.ca	37	6	38709609	38709609	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DNAH8	NM_001206927	exon8	c.A1239T	p.P413P	.	.	725	156	389	3	.	615
DNAH9	1770	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	11696953	11696953	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DNAH9	NM_001372	exon42	c.A8195G	p.Q2732R	.	.	102	40	111	0	.	168
DNASE1L1	1774	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	153633398	153633398	+	Silent	SNP	C	C	T	rs150301252	byfrequency	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DNASE1L1	NM_006730	exon3	c.G162A	p.V54V	.	.	224	114	132	1	C|1.000;T|0.000	554
DPCR1	135656	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	30917770	30917770	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DPCR1	NM_080870	exon2	c.A1529G	p.E510G	.	.	182	52	120	1	.	90
DPP10	57628	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	116593732	116593732	+	Splice_Site	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DPP10	NM_020868	exon22	c.1951-1G>T	.	.	.	125	46	127	0	.	142
DPP4	1803	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	162895528	162895528	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DPP4	NM_001935	exon7	c.G423T	p.Q141H	.	.	164	58	180	0	.	93
DSCAML1	57453	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	117387274	117387274	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DSCAML1	NM_020693	exon8	c.T1871A	p.V624E	.	.	83	20	130	1	.	159
DSE	29940	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	116757673	116757673	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DSE	NM_001080976	exon6	c.A2042T	p.Q681L	.	.	118	55	110	0	.	91
DSP	1832	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	7556029	7556029	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DSP	NM_004415	exon2	c.G249T	p.M83I	.	.	183	38	134	2	.	518
DSP	1832	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	7581019	7581019	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DSP	NM_004415	exon23	c.G4596T	p.E1532D	.	.	275	73	115	1	.	518
DSP	1832	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	7581656	7581656	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DSP	NM_004415	exon23	c.A5233G	p.K1745E	.	.	330	72	197	1	.	518
DST	667	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	56497806	56497806	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DST	NM_001723	exon14	c.G2040T	p.Q680H	.	.	136	26	94	0	.	523
DST	667	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	6	56328485	56328485	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DST	NM_015548	exon81	c.C14896T	p.R4966X	.	.	168	30	83	0	.	523
DTX2	113878	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	7	76112438	76112438	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DTX2	NM_001102596	exon2	c.A882T	p.P294P	.	.	143	55	154	0	.	524
DYNC2H1	79659	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	102991298	102991298	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DYNC2H1	NM_001377	exon7	c.T1122G	p.N374K	.	.	135	58	136	1	.	68
DYNC2H1	79659	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	103026215	103026215	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DYNC2H1	NM_001377	exon25	c.A3729T	p.K1243N	.	.	125	49	139	0	.	68
DZIP1	22873	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	96237036	96237036	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DZIP1	NM_198968	exon22	c.G2478T	p.V826V	.	.	123	50	181	0	.	92
DZIP1L	199221	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	137787119	137787119	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	DZIP1L	NM_173543	exon13	c.C1706A	p.P569Q	.	.	55	18	100	2	.	92
ECSIT	51295	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	11618657	11618657	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ECSIT	NM_016581	exon6	c.A805G	p.S269G	.	.	60	21	59	2	.	91
EDN1	1906	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	12290873	12290873	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EDN1	NM_001955	exon1	c.T11G	p.L4W	.	.	156	37	80	1	.	91
EEF1E1	9521	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	8097609	8097609	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EEF1E1	NM_001135650	exon2	c.T179C	p.L60S	.	.	227	60	150	0	.	186
EFNB2	1948	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	107145427	107145427	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EFNB2	NM_004093	exon5	c.G963A	p.M321I	.	.	32	9	32	0	.	91
EGF	1950	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	110904598	110904598	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EGF	NM_001963	exon16	c.A2392G	p.N798D	.	.	111	56	121	0	.	524
EHMT1	79813	broad.mit.edu	37	9	140671204	140671204	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EHMT1	NM_001145527	exon12	c.A1926T	p.I642I	.	.	285	7	325	0	.	154
ELF5	2001	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	34515128	34515128	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ELF5	NM_198381	exon3	c.A283T	p.S95C	.	.	95	45	117	0	.	227
ELMOD1	55531	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	107526788	107526788	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_018712	exon11	c.A828G	p.T276T	.	.	59	30	84	0	.	.
ELN	2006	broad.mit.edu	37	7	73456990	73456990	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ELN	NM_001081753	exon6	c.T279A	p.P93P	.	.	78	4	90	0	.	95
EMD	2010	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	X	153607910	153607910	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EMD	NM_000117	exon1	c.G66T	p.P22P	.	.	100	46	77	0	.	130
EMILIN1	11117	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	27302028	27302028	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EMILIN1	NM_007046	exon1	c.A95G	p.Y32C	.	.	47	16	70	0	.	91
EMR3	84658	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	14772862	14772862	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EMR3	NM_032571	exon4	c.G268A	p.G90R	.	.	109	47	122	0	.	528
ENO2	2026	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	7026812	7026812	+	Silent	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ENO2	NM_001975	exon6	c.G378C	p.R126R	.	.	43	16	50	0	.	226
ENPP2	5168	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	120628551	120628551	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ENPP2	NM_001130863	exon8	c.T731A	p.L244Q	.	.	195	93	71	0	.	292
ENPP3	5169	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	132006562	132006562	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ENPP3	NM_005021	exon13	c.A1179T	p.I393I	.	.	186	88	211	0	.	95
ENTHD1	150350	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	40257983	40257983	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ENTHD1	NM_152512	exon3	c.G379T	p.V127F	.	.	194	81	209	0	.	93
EPB41L3	23136	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	5397253	5397253	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EPB41L3	NM_012307	exon18	c.C2645A	p.A882E	.	.	81	24	90	0	.	95
EPHA2	1969	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	16459692	16459692	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EPHA2	NM_004431	exon11	c.A2036T	p.E679V	.	.	47	25	52	0	.	1419
EPHA5	2044	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	66356415	66356415	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EPHA5	NM_004439	exon5	c.C1082G	p.P361R	.	.	174	52	207	1	.	1430
EPHA5	2044	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	66467379	66467379	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EPHA5	NM_004439	exon3	c.A890T	p.E297V	.	.	55	23	58	0	.	1430
EPHA5	2044	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	66467935	66467935	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EPHA5	NM_004439	exon3	c.T334A	p.W112R	.	.	50	22	63	0	.	1430
EPHA6	285220	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	96585699	96585699	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EPHA6	NM_001080448	exon2	c.G416A	p.G139E	.	.	506	202	553	2	.	1561
EPHB6	2051	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	142563375	142563375	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EPHB6	NM_004445	exon8	c.C1092T	p.A364A	.	.	44	13	97	0	.	1489
EPHX4	253152	broad.mit.edu;bcgsc.ca	37	1	92495733	92495733	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EPHX4	NM_173567	exon1	c.T97C	p.S33P	.	.	102	36	93	2	.	90
EPHX4	253152	broad.mit.edu;bcgsc.ca	37	1	92495735	92495735	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EPHX4	NM_173567	exon1	c.C99A	p.S33S	.	.	103	36	90	1	.	90
EPRS	2058	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	220156702	220156702	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EPRS	NM_004446	exon22	c.A3129G	p.I1043M	.	.	466	97	289	1	.	92
ERCC4	2072	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	16	14020498	14020498	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ERCC4	NM_005236	exon3	c.A469T	p.K157X	.	.	80	31	87	0	.	665
EVC2	132884	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	5642427	5642427	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EVC2	NM_147127	exon10	c.G1284T	p.M428I	.	.	139	77	115	1	.	155
EVC2	132884	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	5578129	5578129	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EVC2	NM_147127	exon18	c.C3110T	p.A1037V	.	.	72	37	62	0	.	155
EXOSC10	5394	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	11141273	11141273	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	EXOSC10	NM_002685	exon11	c.A1303T	p.S435C	.	.	128	55	161	0	.	116
FAM129B	64855	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	130279260	130279260	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM129B	NM_022833	exon8	c.C849A	p.A283A	.	.	57	21	81	0	.	68
FAM13B	51306	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	137284750	137284750	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001101800	exon17	c.A1988G	p.K663R	.	.	77	35	63	0	.	.
FAM13C	220965	broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	61014197	61014197	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM13C	NM_198215	exon11	c.A1243C	p.K415Q	.	.	116	36	109	2	.	70
FAM150A	389658	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	53451056	53451056	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM150A	NM_207413	exon4	c.T337C	p.C113R	.	.	701	160	521	0	.	68
FAM163A	148753	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	179783192	179783192	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM163A	NM_173509	exon5	c.T372G	p.F124L	.	.	356	37	229	0	.	91
FAM186A	121006	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	50749396	50749396	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM186A	NM_001145475	exon4	c.T1219C	p.Y407H	.	.	69	33	75	0	.	68
FAM208B	54906	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	5789185	5789185	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_017782	exon15	c.G3801T	p.V1267V	.	.	132	13	90	0	.	.
FAM27L	284123	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	21825482	21825482	+	RNA	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	221	87	272	0	.	.
FAM47A	158724	broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	34149063	34149063	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM47A	NM_203408	exon1	c.T1333A	p.C445S	.	.	131	114	173	2	.	134
FAM47B	170062	bcgsc.ca	37	X	34962030	34962030	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM47B	NM_152631	exon1	c.1082delG	p.R361fs	.	.	112	94	116	2	.	196
FAM5B	57795	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	177245534	177245534	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM5B	NM_021165	exon6	c.T976C	p.S326P	.	.	691	69	495	0	.	28
FAM5C	339479	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	190067337	190067337	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM5C	NM_199051	exon8	c.A2112T	p.L704L	.	.	303	67	147	0	.	228
FAM71B	153745	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	156590341	156590341	+	Missense_Mutation	SNP	G	G	T	rs200982218	alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM71B	NM_130899	exon2	c.C935A	p.A312E	.	.	53	29	52	0	G|0.999;A|0.000	96
FAM71F2	346653	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	128323061	128323061	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001012454	exon5	c.A778G	p.K260E	.	.	77	39	111	0	.	.
FAM74A3	728495	broad.mit.edu;bcgsc.ca;mdanderson.org	37	9	40716298	40716298	+	RNA	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM74A3	.	.	.	.	.	.	247	48	254	0	.	23
FAM83B	222584	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	54805800	54805800	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM83B	NM_001010872	exon5	c.T2031C	p.P677P	.	.	534	118	279	2	.	96
FAM83B	222584	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	54804890	54804890	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM83B	NM_001010872	exon5	c.A1121T	p.Q374L	.	.	409	95	239	0	.	96
FAM86DP	692099	broad.mit.edu	37	3	75472170	75472170	+	RNA	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	910	10	755	0	.	.
FAM86EP	348926	broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	3949736	3949736	+	RNA	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	75	38	54	0	.	.
FAM96A	84191	broad.mit.edu	37	15	64365211	64365211	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM96A	NM_032231	exon5	c.T402C	p.N134N	.	.	102	4	111	0	.	90
FAM98B	283742	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	38773693	38773693	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAM98B	NM_001042429	exon7	c.A930C	p.E310D	.	.	150	60	149	0	.	515
FARP2	9855	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	242380941	242380941	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FARP2	NM_014808	exon13	c.C1381T	p.L461F	.	.	89	40	96	0	.	93
FASTK	10922	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	150774867	150774867	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FASTK	NM_006712	exon6	c.G1040A	p.G347D	.	.	88	36	101	0	.	359
FAT2	2196	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	150930189	150930189	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAT2	NM_001447	exon7	c.C4540T	p.L1514F	.	.	68	29	79	0	.	96
FAT3	120114	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	92498202	92498202	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FAT3	NM_001008781	exon5	c.T4142C	p.V1381A	.	.	115	46	143	0	.	73
FBLN1	2192	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	45970507	45970507	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FBLN1	NM_006486	exon15	c.C1814T	p.T605I	.	.	57	22	82	0	.	515
FBN1	2200	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	15	48741033	48741033	+	Missense_Mutation	SNP	G	G	T	rs145082616	alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FBN1	NM_000138	exon46	c.C5603A	p.T1868K	.	.	69	7	60	0	G|1.000;A|0.000	92
FCGR2A	2212	broad.mit.edu;bcgsc.ca	37	1	161479859	161479859	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FCGR2A	NM_001136219	exon4	c.T614C	p.V205A	.	.	818	26	580	1	.	91
FCGR2A	2212	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	161479767	161479767	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FCGR2A	NM_001136219	exon4	c.C522T	p.I174I	.	.	1276	240	853	1	.	91
FCGR3B	2215	broad.mit.edu	37	1	161600918	161600918	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FCGR3B	NM_001271035	exon1	c.A75G	p.I25M	.	.	559	7	335	0	.	22
FCRL6	343413	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	159779343	159779343	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FCRL6	NM_001004310	exon5	c.A756G	p.S252S	.	.	144	99	100	1	.	93
FER1L6	654463	ucsc.edu;bcgsc.ca	37	8	125103740	125103740	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FER1L6	NM_001039112	exon34	c.G4468A	p.D1490N	.	.	380	182	228	2	.	100
FERMT3	83706	ucsc.edu;bcgsc.ca	37	11	63978540	63978540	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FERMT3	NM_031471	exon4	c.G411T	p.E137D	.	.	45	4	99	0	.	23
FGD5	152273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	3	14860937	14860937	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FGD5	NM_152536	exon1	c.C359A	p.S120X	.	.	187	158	204	1	.	231
FGFBP1	9982	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	15938116	15938116	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FGFBP1	NM_005130	exon3	c.A140T	p.Q47L	.	.	219	128	149	0	.	90
FGFR2	2263	broad.mit.edu	37	10	123298177	123298177	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FGFR2	NM_000141	exon6	c.A677T	p.K226M	.	.	193	5	154	0	.	2607
FHAD1	114827	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	15707218	15707218	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FHAD1	NM_052929	exon28	c.G3661A	p.A1221T	.	.	86	40	75	0	.	69
FLG	2312	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	152280562	152280562	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FLG	NM_002016	exon3	c.A6800T	p.H2267L	.	.	367	71	245	0	.	106
FLG2	388698	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	152328113	152328113	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FLG2	NM_001014342	exon3	c.T2149C	p.S717P	.	.	290	55	160	2	.	151
FLG2	388698	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	152329823	152329823	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FLG2	NM_001014342	exon3	c.T439A	p.S147T	.	.	388	272	266	0	.	151
FMNL1	752	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	43311537	43311537	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FMNL1	NM_005892	exon6	c.C584A	p.S195Y	.	.	63	11	89	0	.	91
FMOD	2331	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	203316593	203316593	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FMOD	NM_002023	exon2	c.A806G	p.K269R	.	.	183	36	111	0	.	137
FN3KRP	79672	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	80674715	80674715	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FN3KRP	NM_024619	exon1	c.C84T	p.G28G	.	.	449	206	586	2	.	115
FNDC1	84624	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	159654905	159654905	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FNDC1	NM_032532	exon11	c.G3361T	p.A1121S	.	.	53	32	44	0	.	138
FOXB2	442425	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	9	79635447	79635447	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FOXB2	NM_001013735	exon1	c.T877A	p.S293T	.	.	40	20	43	0	.	205
FOXF1	2294	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	16	86544400	86544400	+	Nonsense_Mutation	SNP	C	C	A	rs121909336		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FOXF1	NM_001451	exon1	c.C225A	p.Y75X	.	.	121	43	136	0	.	226
FOXN2	3344	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	48602463	48602463	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FOXN2	NM_002158	exon7	c.A1177G	p.I393V	.	.	100	44	101	1	.	226
FPGT-TNNI3K	100526835	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	1	74833633	74833633	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001112808	exon15	c.A1609T	p.K537X	.	.	332	114	379	0	.	.
FPGT-TNNI3K	100526835	ucsc.edu;bcgsc.ca;mdanderson.org	37	1	74901765	74901765	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001112808	exon20	c.C2077A	p.H693N	.	.	135	57	161	1	.	.
FREM1	158326	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	14859459	14859459	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FREM1	NM_144966	exon5	c.T353G	p.I118R	.	.	119	49	178	0	.	138
FRMD5	84978	broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	44202176	44202176	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FRMD5	NM_032892	exon5	c.T331A	p.Y111N	.	.	45	15	61	1	.	91
FRS3	10817	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	41739273	41739273	+	Splice_Site	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FRS3	NM_006653	exon8	c.565-2A>T	.	.	.	37	11	16	0	.	92
FTHL17	53940	ucsc.edu;bcgsc.ca	37	X	31089830	31089830	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FTHL17	NM_031894	exon1	c.A241T	p.I81F	.	.	131	112	145	2	.	130
FURIN	5045	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	15	91423153	91423153	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FURIN	NM_002569	exon12	c.C1315T	p.Q439X	.	.	122	56	174	0	.	1083
FZD10	11211	broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	130648002	130648002	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FZD10	NM_007197	exon1	c.A515C	p.Q172P	.	.	99	42	98	1	.	658
FZD1	8321	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	90895564	90895564	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FZD1	NM_003505	exon1	c.A1369G	p.I457V	.	.	56	20	57	0	.	658
FZD3	7976	broad.mit.edu	37	8	28384888	28384888	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FZD3	NM_017412	exon5	c.A611G	p.Y204C	.	.	86	3	195	0	.	659
FZD3	7976	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	28385435	28385435	+	Silent	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	FZD3	NM_017412	exon5	c.G1158C	p.G386G	.	.	69	50	142	0	.	659
GABBR1	2550	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	29599361	29599361	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GABBR1	NM_021904	exon3	c.A101T	p.H34L	.	.	160	37	136	1	.	521
GABBR1	2550	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	29591692	29591692	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GABBR1	NM_001470	exon7	c.C767A	p.A256D	.	.	278	57	215	0	.	521
GABPB1	2553	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	50578223	50578223	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GABPB1	NM_002041	exon8	c.A1077T	p.P359P	.	.	104	45	130	0	.	153
GABRA5	2558	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	27114454	27114454	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GABRA5	NM_001165037	exon3	c.T59A	p.I20N	.	.	132	45	139	0	.	91
GATM	2628	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	45668899	45668899	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GATM	NM_001482	exon2	c.A188C	p.D63A	.	.	100	37	99	0	.	90
GBGT1	26301	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	9	136029632	136029632	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GBGT1	NM_021996	exon7	c.C376G	p.Q126E	.	.	33	11	37	0	.	90
GBP6	163351	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	89848365	89848365	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GBP6	NM_198460	exon8	c.A1295G	p.H432R	.	.	169	54	200	0	.	92
GDPD1	284161	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	57351120	57351120	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GDPD1	NM_182569	exon10	c.A931T	p.N311Y	.	.	65	25	44	0	.	90
GEMIN5	25929	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	154311783	154311783	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GEMIN5	NM_015465	exon4	c.T537C	p.I179I	.	.	158	70	155	0	.	228
GH2	2689	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	61957713	61957713	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GH2	NM_002059	exon5	c.T622C	p.C208R	.	.	91	11	114	0	.	93
GIN1	54826	ucsc.edu;bcgsc.ca	37	5	102444366	102444366	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GIN1	NM_017676	exon2	c.G46A	p.A16T	.	.	81	30	105	2	.	92
GIT2	9815	broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	110421240	110421240	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GIT2	NM_057170	exon6	c.A561G	p.A187A	.	.	168	72	171	1	.	226
GJA10	84694	bcgsc.ca	37	6	90604594	90604594	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GJA10	NM_032602	exon1	c.G407T	p.R136M	.	.	119	61	136	3	.	90
GJD2	57369	broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	35045130	35045130	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GJD2	NM_020660	exon2	c.A515G	p.K172R	.	.	169	67	233	2	.	90
GK5	256356	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	141884551	141884551	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GK5	NM_001039547	exon16	c.A1503G	p.P501P	.	.	143	60	158	1	.	90
GLI2	2736	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	121743964	121743964	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	GLI2,NS,carcinoma,0	GLI2	NM_005270	exon12	c.G2067T	p.G689G	.	.	138	66	160	0	.	954
GLI4	2738	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	144351615	144351615	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GLI4	NM_138465	exon2	c.G49T	p.V17F	.	.	151	68	98	0	.	91
GLP1R	2740	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	39040691	39040691	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GLP1R	NM_002062	exon6	c.T563A	p.I188N	.	.	146	42	92	0	.	659
GLTPD1	80772	bcgsc.ca	37	1	1263033	1263033	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001029885	exon3	c.C535A	p.P179T	.	.	60	6	102	0	.	.
GLTSCR1	29998	bcgsc.ca	37	19	48185325	48185325	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GLTSCR1	NM_015711	exon7	c.A2199T	p.P733P	.	.	18	4	37	0	.	48
GPATCH2	55105	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	217783743	217783743	+	Splice_Site	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPATCH2	NM_018040	exon6	c.1019-1G>T	.	.	.	124	35	61	0	.	91
GPC4	2239	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	132458433	132458433	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPC4	NM_001448	exon3	c.G451T	p.V151L	.	.	200	91	118	0	.	226
GPR110	266977	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	46976727	46976727	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPR110	NM_153840	exon11	c.A2444T	p.Q815L	.	.	457	122	275	0	.	71
GPR112	139378	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	135488040	135488040	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPR112	NM_153834	exon23	c.A8844T	p.L2948F	.	.	157	26	76	0	.	183
GPR113	165082	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	26540974	26540974	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPR113	NM_001145168	exon2	c.T196G	p.C66G	.	.	96	45	128	2	.	94
GPR116	221395	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	46826559	46826559	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPR116	NM_015234	exon17	c.G3081T	p.L1027F	.	.	148	42	100	1	.	91
GPR123	84435	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	134910562	134910562	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPR123	NM_001083909	exon3	c.C88A	p.L30I	.	.	54	32	44	0	.	90
GPR133	283383	broad.mit.edu	37	12	131590300	131590300	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPR133	NM_198827	exon17	c.T1777A	p.S593T	.	.	9	3	18	0	.	191
GPR133	283383	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	131456098	131456098	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPR133	NM_198827	exon4	c.A283G	p.S95G	.	.	77	34	85	0	.	191
GPR22	2845	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	107114661	107114661	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPR22	NM_005295	exon3	c.T156A	p.I52I	.	.	195	83	174	0	.	92
GPR45	11250	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	105858393	105858393	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPR45	NM_007227	exon1	c.C78A	p.S26S	.	.	121	50	132	0	.	154
GPR89B	51463	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	147408746	147408746	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPR89B	NM_016334	exon2	c.A48T	p.L16L	.	.	383	87	249	0	.	158
GPSM1	26086	broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	139231978	139231978	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GPSM1	NM_015597	exon5	c.A659G	p.Y220C	.	.	157	73	189	1	.	90
GRIA2	2891	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	158142912	158142912	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GRIA2	NM_000826	exon2	c.A182G	p.H61R	.	.	125	55	140	2	.	515
GRID2IP	392862	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	6550307	6550307	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001145118	exon10	c.C1586A	p.P529H	.	.	60	29	64	0	.	.
GRIK3	2899	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	37315910	37315910	+	Splice_Site	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GRIK3	NM_000831	exon10	c.1326+2T>C	.	.	.	45	16	53	0	.	158
GRIK5	2901	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	42510881	42510881	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GRIK5	NM_002088	exon15	c.T1953C	p.P651P	.	.	49	17	59	0	.	90
GRIP2	80852	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	14561754	14561754	+	RNA	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GRIP2	.	.	.	.	.	.	76	55	86	1	.	69
GRK7	131890	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	141497734	141497734	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GRK7	NM_139209	exon1	c.G608T	p.G203V	.	.	170	70	193	1	.	522
GRM3	2913	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	86416372	86416372	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GRM3	NM_000840	exon3	c.A1264G	p.M422V	.	.	89	9	135	0	.	528
GRM4	2914	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	34003458	34003458	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GRM4	NM_000841	exon9	c.A2429T	p.Q810L	.	.	377	69	228	0	.	525
GRM5	2915	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	88338049	88338049	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GRM5	NM_000842	exon5	c.C1231A	p.L411I	.	.	117	52	140	0	.	949
GRXCR2	643226	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	5	145239349	145239349	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GRXCR2	NM_001080516	exon3	c.T694A	p.C232S	.	.	213	11	258	0	.	22
GSDMC	56169	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	130778031	130778031	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GSDMC	NM_031415	exon4	c.T413C	p.L138S	.	.	117	29	73	0	.	93
GTF2IRD2P1	401375	bcgsc.ca	37	7	72657548	72657548	+	RNA	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	917	256	921	7	.	.
GTF3C1	2975	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	27472839	27472839	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GTF3C1	NM_001520	exon37	c.G6162T	p.K2054N	.	.	45	18	68	0	.	94
GTSE1	51512	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	46719148	46719148	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GTSE1	NM_016426	exon8	c.G1494T	p.T498T	.	.	57	23	82	0	.	187
GUCY1A3	2982	ucsc.edu;bcgsc.ca;mdanderson.org	37	4	156634600	156634600	+	Silent	SNP	T	T	C	rs143472664	byfrequency	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	GUCY1A3	NM_001130687	exon7	c.T1437C	p.N479N	.	.	245	101	243	0	T|0.995;C|0.005	93
HAS1	3036	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	52219555	52219555	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HAS1	NM_001523	exon4	c.G1015T	p.D339Y	.	.	103	38	163	0	.	92
HCG4	54435	broad.mit.edu	37	6	29760801	29760801	+	RNA	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	16	3	14	0	.	.
HDAC9	9734	broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	18705951	18705951	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HDAC9	NM_178425	exon11	c.A1583G	p.N528S	.	.	110	39	111	1	.	227
HDC	3067	broad.mit.edu	37	15	50546442	50546442	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HDC	NM_002112	exon6	c.T605C	p.L202S	.	.	122	4	159	0	.	156
HEATR1	55127	bcgsc.ca	37	1	236719465	236719465	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HEATR1	NM_018072	exon38	c.C5449A	p.L1817I	.	.	374	248	243	5	.	93
HEATR1	55127	broad.mit.edu	37	1	236732332	236732332	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HEATR1	NM_018072	exon29	c.C4041A	p.N1347K	.	.	351	5	180	0	.	93
HECTD1	25831	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	14	31641123	31641123	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HECTD1	NM_015382	exon8	c.C1276T	p.Q426X	.	.	312	121	352	1	.	570
HECTD4	283450	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	112688787	112688787	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001109662	exon24	c.A3302T	p.K1101I	.	.	127	58	158	0	.	.
HECW2	57520	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	197183894	197183894	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HECW2	NM_020760	exon9	c.G1720A	p.D574N	.	.	101	39	108	0	.	668
HELZ2	85441	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	62203527	62203527	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001037335	exon2	c.A212T	p.D71V	.	.	83	23	79	0	.	.
HIPK3	10114	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	33358716	33358716	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HIPK3	NM_001048200	exon4	c.G1317T	p.M439I	.	.	60	27	91	0	.	336
HIST1H2BJ	8970	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	27100194	27100194	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HIST1H2BJ	NM_021058	exon1	c.G336T	p.V112V	.	.	174	34	93	0	.	90
HIST1H3D	8351	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	26197264	26197264	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HIST1H3D	NM_003530	exon2	c.T215G	p.V72G	.	.	339	64	192	1	.	90
HKR1	284459	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	37854185	37854185	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HKR1	NM_181786	exon6	c.A1488T	p.P496P	.	.	128	50	103	0	.	92
HLA-DMB	3109	broad.mit.edu;bcgsc.ca	37	6	32905064	32905064	+	Silent	SNP	A	A	G	rs147622332		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HLA-DMB	NM_002118	exon3	c.T507C	p.N169N	.	.	450	74	256	1	A|1.000;G|0.000	90
HMMR	3161	broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	162900512	162900512	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HMMR	NM_001142556	exon9	c.A853G	p.K285E	.	.	313	136	349	2	.	90
HOXA6	3203	ucsc.edu	37	7	27185230	27185230	+	RNA	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HOXA6	.	.	.	.	.	.	25	12	19	0	.	91
HPS4	89781	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	26860234	26860234	+	Silent	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HPS4	NM_022081	exon11	c.C1362G	p.P454P	.	.	52	20	82	0	.	90
HRH2	3274	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	175112498	175112498	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HRH2	NM_001131055	exon3	c.A1163T	p.H388L	.	.	207	87	284	1	.	91
HRH4	59340	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	22057255	22057255	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HRH4	NM_021624	exon3	c.T902C	p.L301S	.	.	142	55	172	0	.	92
HRNR	388697	bcgsc.ca	37	1	152186189	152186189	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HRNR	NM_001009931	exon3	c.C7916A	p.S2639Y	.	.	211	74	206	0	.	93
HRNR	388697	broad.mit.edu	37	1	152188237	152188237	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HRNR	NM_001009931	exon3	c.T5868A	p.S1956S	.	.	659	19	671	0	.	93
HS6ST1	9394	broad.mit.edu	37	2	129026114	129026114	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HS6ST1	NM_004807	exon2	c.G858A	p.R286R	.	.	132	28	142	0	.	91
HSPA13	6782	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	15746215	15746215	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HSPA13	NM_006948	exon5	c.A1139C	p.K380T	.	.	149	71	153	0	.	226
HSPA1L	3305	broad.mit.edu;ucsc.edu	37	6	31779395	31779395	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HSPA1L	NM_005527	exon2	c.G355T	p.E119X	.	.	563	140	332	2	.	230
HYDIN	54768	broad.mit.edu	37	16	71054178	71054178	+	Missense_Mutation	SNP	T	T	C	rs6416709	byfrequency	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	HYDIN	NM_001270974	exon22	c.A3229G	p.I1077V	.	.	69	5	87	0	T|0.500;C|0.500	92
ICAM5	7087	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	10404581	10404581	+	Missense_Mutation	SNP	G	G	T	rs147604357	alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ICAM5	NM_003259	exon7	c.G1673T	p.R558L	.	.	41	19	52	0	G|0.999;A|0.000	153
IFFO1	25900	broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	6659920	6659920	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IFFO1	NM_001039670	exon3	c.G871A	p.A291T	.	.	85	24	121	2	.	68
IFI35	3430	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	41166312	41166312	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IFI35	NM_005533	exon7	c.G863T	p.G288V	.	.	52	29	80	0	.	91
IFIT5	24138	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	91174557	91174558	+	Frame_Shift_Ins	INS	-	-	GA	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IFIT5	NM_012420	exon1	c.2_3insGA	p.M1fs	.	.	78	45	40	0	.	90
IFNAR1	3454	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	34715660	34715660	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IFNAR1	NM_000629	exon4	c.A463T	p.M155L	.	.	113	48	98	0	.	91
IFT122	55764	ucsc.edu;bcgsc.ca;mdanderson.org	37	3	129180119	129180119	+	Silent	SNP	A	A	G	rs138793724	byfrequency	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IFT122	NM_052985	exon6	c.A474G	p.Q158Q	.	.	144	57	210	0	A|0.996;G|0.004	92
IFT81	28981	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	110565247	110565247	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IFT81	NM_014055	exon2	c.A62G	p.Y21C	.	.	249	83	249	0	.	91
IGSF10	285313	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	151160801	151160801	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IGSF10	NM_178822	exon5	c.A5934G	p.P1978P	.	.	94	38	108	0	.	102
IGSF10	285313	ucsc.edu;bcgsc.ca	37	3	151156029	151156029	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IGSF10	NM_178822	exon6	c.A6320G	p.N2107S	.	.	281	119	295	3	.	102
IGSF9B	22997	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	133807314	133807314	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IGSF9B	NM_014987	exon5	c.C636T	p.S212S	.	.	83	28	104	0	.	68
IKBKB	3551	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	42171857	42171857	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IKBKB	NM_001556	exon9	c.A710G	p.Q237R	.	.	95	61	165	0	.	1164
IKZF1	10320	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	50467947	50467947	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IKZF1	NM_006060	exon8	c.C1182T	p.C394C	.	.	87	43	115	0	.	1242
IL17C	27189	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	88705453	88705453	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IL17C	NM_013278	exon2	c.T71A	p.L24H	.	.	71	8	79	0	.	90
IL17RC	84818	ucsc.edu;bcgsc.ca	37	3	9974301	9974301	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IL17RC	NM_153461	exon17	c.A1610G	p.K537R	.	.	151	129	214	2	.	92
IL18RAP	8807	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	103040730	103040730	+	Missense_Mutation	SNP	A	A	T	rs138125296	byfrequency;alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IL18RAP	NM_003853	exon5	c.A435T	p.L145F	.	.	177	79	161	0	A|1.000;G|0.000	95
IL1RAP	3556	ucsc.edu;bcgsc.ca	37	3	190347188	190347188	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IL1RAP	NM_001167929	exon8	c.A952G	p.I318V	.	.	250	93	297	3	.	91
IMPA2	3613	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	12009936	12009936	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IMPA2	NM_014214	exon3	c.C285A	p.S95R	.	.	92	42	101	0	.	226
IMPG1	3617	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	76744355	76744355	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IMPG1	NM_001563	exon3	c.C451A	p.L151M	.	.	102	30	105	1	.	93
INPP4B	8821	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	142949992	142949992	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	INPP4B	NM_003866	exon27	c.G2718T	p.M906I	.	.	89	47	115	0	.	228
INSRR	3645	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	156816454	156816454	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	INSRR	NM_014215	exon8	c.A1667T	p.Q556L	.	.	223	40	152	1	.	1403
INTS1	26173	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	7	1513873	1513873	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001080453	exon41	c.G5760T	p.P1920P	.	.	21	11	19	0	.	.
IRAK3	11213	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	66638446	66638446	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IRAK3	NM_007199	exon9	c.T1068A	p.D356E	.	.	101	35	118	0	.	1379
IRGC	56269	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	44223324	44223324	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IRGC	NM_019612	exon2	c.C614A	p.A205D	.	.	34	14	33	0	.	70
IRX1	79192	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	3600372	3600372	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IRX1	NM_024337	exon2	c.C1310A	p.P437Q	.	.	37	17	37	0	.	228
ISLR2	57611	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	74426996	74426996	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ISLR2	NM_001130138	exon4	c.C1901G	p.P634R	.	.	89	40	112	0	.	90
ITGA11	22801	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	15	68609680	68609680	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ITGA11	NM_001004439	exon21	c.G2638T	p.E880X	.	.	101	39	130	0	.	538
ITGA9	3680	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	37774280	37774280	+	Silent	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ITGA9	NM_002207	exon19	c.A2145C	p.S715S	.	.	74	63	92	0	.	715
ITM2C	81618	mdanderson.org	37	2	231741675	231741675	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ITM2C	NM_030926	exon4	c.A554G	p.N185S	.	.	86	10	93	1	.	90
ITPR3	3710	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	33646238	33646238	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ITPR3	NM_002224	exon29	c.A3689G	p.Q1230R	.	.	289	82	191	1	.	1085
IVL	3713	ucsc.edu;bcgsc.ca;mdanderson.org	37	1	152883220	152883220	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	IVL	NM_005547	exon2	c.T947A	p.L316Q	.	.	313	140	211	2	.	93
JPH2	57158	mdanderson.org	37	20	42744412	42744412	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	JPH2	NM_020433	exon4	c.G1903T	p.A635S	.	.	45	18	47	0	.	91
KAT6A	7994	broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	41798813	41798813	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001099412	exon16	c.A2586G	p.P862P	.	.	33	24	84	1	.	.
KBTBD12	166348	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	127642796	127642796	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KBTBD12	NM_207335	exon1	c.A892T	p.S298C	.	.	131	60	162	0	.	23
KBTBD8	84541	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	67049479	67049479	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KBTBD8	NM_032505	exon2	c.C91T	p.H31Y	.	.	271	93	208	0	.	587
KCNA2	3737	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	111146974	111146974	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KCNA2	NM_001204269	exon3	c.A431T	p.E144V	.	.	95	45	82	0	.	91
KCNA3	3738	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	111216207	111216207	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KCNA3	NM_002232	exon1	c.G1225T	p.V409F	.	.	70	28	92	0	.	95
KCNAB1	7881	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	155838579	155838579	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KCNAB1	NM_172160	exon1	c.T179A	p.L60Q	.	.	132	53	138	1	.	94
KCNH1	3756	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	211192594	211192594	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KCNH1	NM_172362	exon6	c.T563A	p.L188Q	.	.	58	29	25	0	.	94
KCNK18	338567	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	118969679	118969679	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KCNK18	NM_181840	exon3	c.A1024G	p.I342V	.	.	132	36	107	0	.	91
KCNN3	3782	hgsc.bcm.edu	37	1	154842221	154842222	+	Nonsense_Mutation	INS	-	-	CTGCTGCTGCTGCTGCTA	rs3831942	alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KCNN3	NM_001204087	exon1	c.220_221insTAGCAGCAGCAGCAGCAG	p.Q74delinsX	.	.	113	55	73	0	.	91
KCNQ3	3786	broad.mit.edu;bcgsc.ca	37	8	133141583	133141583	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KCNQ3	NM_004519	exon15	c.G2545T	p.G849C	.	.	166	46	78	2	.	138
KCP	375616	broad.mit.edu;ucsc.edu;mdanderson.org	37	7	128543812	128543812	+	RNA	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KCP	.	.	.	.	.	.	157	61	168	0	.	68
KCTD1	284252	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	18	24126984	24126984	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KCTD1	NM_001142730	exon1	c.A1517T	p.Q506L	.	.	26	15	26	0	.	91
KDR	3791	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	55973948	55973948	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KDR	NM_002253	exon10	c.C1368G	p.I456M	.	.	115	43	154	0	.	2298
KERA	11081	broad.mit.edu;bcgsc.ca	37	12	91445249	91445249	+	Silent	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KERA	NM_007035	exon3	c.A933C	p.A311A	.	.	56	27	52	2	.	91
KIAA1024	23251	ucsc.edu;bcgsc.ca;mdanderson.org	37	15	79749155	79749155	+	Missense_Mutation	SNP	C	C	A	rs3750000	byfrequency;alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIAA1024	NM_015206	exon2	c.C666A	p.N222K	.	.	138	59	131	1	C|0.960;T|0.040	183
KIAA1211	57482	broad.mit.edu	37	4	57179442	57179442	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIAA1211	NM_020722	exon7	c.T434C	p.I145T	.	.	95	2	114	0	.	70
KIAA1217	56243	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	24833078	24833078	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIAA1217	NM_019590	exon19	c.A4879T	p.R1627W	.	.	119	64	84	0	.	98
KIAA1549L	25758	broad.mit.edu	37	11	33667340	33667340	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_012194	exon16	c.T4627A	p.S1543T	.	.	187	6	208	0	.	.
KIAA1549L	25758	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	33628353	33628353	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_012194	exon13	c.A4155T	p.A1385A	.	.	118	47	119	0	.	.
KIAA1551	55196	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	32137297	32137297	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_018169	exon4	c.A3408G	p.K1136K	.	.	90	35	101	0	.	.
KIAA1586	57691	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	56917944	56917944	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIAA1586	NM_020931	exon4	c.A647G	p.H216R	.	.	260	61	128	0	.	44
KIAA1731	85459	bcgsc.ca	37	11	93462640	93462640	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIAA1731	NM_033395	exon26	c.C7343T	p.S2448L	.	.	138	56	140	3	.	22
KIAA1804	0	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	233515084	233515084	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIAA1804	NM_032435	exon9	c.A2332T	p.T778S	.	.	299	64	193	2	.	523
KIF18A	81930	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	28119476	28119476	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIF18A	NM_031217	exon2	c.G19T	p.D7Y	.	.	155	64	138	2	.	92
KIF1B	23095	broad.mit.edu;ucsc.edu	37	1	10363425	10363425	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIF1B	NM_183416	exon21	c.A2182T	p.K728X	.	.	334	141	381	2	.	93
KIF24	347240	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	34263160	34263160	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIF24	NM_194313	exon9	c.G1454T	p.C485F	.	.	121	46	157	0	.	22
KIF26A	26153	broad.mit.edu	37	14	104618412	104618412	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIF26A	NM_015656	exon3	c.T349A	p.C117S	.	.	81	4	113	0	.	24
KIF26A	26153	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	104640574	104640574	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIF26A	NM_015656	exon11	c.C2120A	p.A707D	.	.	88	41	127	1	.	24
KIF26B	55083	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	245772585	245772585	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIF26B	NM_018012	exon8	c.A1669T	p.I557F	.	.	509	105	331	1	.	25
KIF4A	24137	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	69572476	69572476	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIF4A	NM_012310	exon14	c.A1458G	p.A486A	.	.	152	77	104	0	.	134
KIF6	221458	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	39387773	39387773	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIF6	NM_145027	exon15	c.T1761A	p.S587S	.	.	170	37	98	1	.	713
KIT	3815	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	4	55564702	55564702	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KIT	NM_000222	exon3	c.C590A	p.S197X	.	.	75	34	100	0	.	20166
KITLG	4254	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	88910260	88910260	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KITLG	NM_003994	exon5	c.A371G	p.K124R	.	.	44	22	69	0	.	227
KLC2	64837	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	66029592	66029592	+	Splice_Site	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KLC2	NM_001134775	exon4	c.460-2A>T	.	.	.	109	45	115	0	.	90
KLF17	128209	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	44595431	44595431	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KLF17	NM_173484	exon2	c.C488T	p.S163F	.	.	91	29	86	1	.	92
KLHL29	114818	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	23918605	23918605	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KLHL29	NM_052920	exon9	c.T1655A	p.L552Q	.	.	64	21	93	0	.	70
KRT23	25984	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	39084545	39084545	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KRT23	NM_015515	exon6	c.A866G	p.E289G	.	.	57	28	89	0	.	91
KRT34	3885	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	39538297	39538297	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KRT34	NM_021013	exon1	c.G328A	p.A110T	.	.	179	69	175	0	.	90
KRT5	3852	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	52913903	52913903	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KRT5	NM_000424	exon1	c.T178A	p.Y60N	.	.	68	26	81	0	.	90
KRTAP16-1	100505753	hgsc.bcm.edu;bcgsc.ca;mdanderson.org	37	17	39464117	39464117	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001146182	exon1	c.C1389T	p.C463C	.	.	103	32	124	0	.	.
KRTAP19-8	728299	ucsc.edu;bcgsc.ca	37	21	32410677	32410677	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KRTAP19-8	NM_001099219	exon1	c.A86G	p.Y29C	.	.	139	64	203	3	.	1
KRTAP29-1	100533177	hgsc.bcm.edu;bcgsc.ca;mdanderson.org	37	17	39459055	39459055	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001257309	exon1	c.C49T	p.P17S	.	.	102	36	94	0	.	.
KRTAP4-6	81871	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	39296524	39296524	+	Silent	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_030976	exon1	c.C216G	p.T72T	.	.	45	19	47	0	.	.
KRTAP5-1	387264	broad.mit.edu;bcgsc.ca	37	11	1605913	1605913	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KRTAP5-1	NM_001005922	exon1	c.T567C	p.S189S	.	.	103	14	129	2	.	44
KRTAP5-3	387266	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	1629498	1629498	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KRTAP5-3	NM_001012708	exon1	c.T118A	p.C40S	.	.	93	39	126	0	.	92
KRTAP5-4	387267	bcgsc.ca	37	11	1643066	1643066	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001012709	exon1	c.T258C	p.G86G	.	.	227	13	300	9	.	.
KRTAP5-6	440023	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	1718512	1718532	+	In_Frame_Del	DEL	GGCTGTGGGGGCTGTGGCTCT	GGCTGTGGGGGCTGTGGCTCT	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	GGCTGTGGGGGCTGTGGCTCT	GGCTGTGGGGGCTGTGGCTCT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KRTAP5-6	NM_001012416	exon1	c.37_57del	p.13_19del	.	.	142	44	159	0	.	90
KTN1	3895	ucsc.edu;bcgsc.ca	37	14	56079277	56079277	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	KTN1	NM_004986	exon2	c.A511G	p.K171E	.	.	231	94	221	2	.	1147
LAMB3	3914	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	209789949	209789949	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LAMB3	NM_000228	exon22	c.A3249T	p.Q1083H	.	.	281	50	205	0	.	156
LAMB4	22798	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	107706917	107706917	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LAMB4	NM_007356	exon20	c.A2575T	p.S859C	.	.	117	48	125	0	.	140
LAMP3	27074	ucsc.edu;bcgsc.ca	37	3	182872047	182872047	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LAMP3	NM_014398	exon2	c.A182C	p.H61P	.	.	172	58	208	4	.	92
LAPTM5	7805	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	31215394	31215394	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LAPTM5	NM_006762	exon2	c.C90G	p.I30M	.	.	59	27	102	0	.	226
LDB3	11155	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	88441277	88441277	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LDB3	NM_007078	exon4	c.C406A	p.P136T	.	.	63	19	35	0	.	92
LEPREL1	55214	broad.mit.edu;mdanderson.org	37	3	189838134	189838134	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LEPREL1	NM_018192	exon1	c.G387A	p.G129G	.	.	24	8	25	0	.	155
LEPREL1	55214	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	189690681	189690681	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LEPREL1	NM_018192	exon11	c.T1681C	p.C561R	.	.	250	106	268	0	.	155
LGSN	51557	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	6	63990332	63990334	+	In_Frame_Del	DEL	TCT	TCT	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	TCT	TCT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LGSN	NM_016571	exon4	c.1122_1124del	p.374_375del	.	.	78	39	75	0	.	227
LHX3	8022	broad.mit.edu;bcgsc.ca	37	9	139089345	139089345	+	Silent	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LHX3	NM_014564	exon6	c.A1035C	p.P345P	.	.	63	31	69	2	.	91
LILRA3	11026	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	54803142	54803142	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LILRA3	NM_006865	exon4	c.C535T	p.R179W	.	.	130	47	174	1	.	91
LILRA3	11026	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	54803146	54803146	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LILRA3	NM_006865	exon4	c.A531G	p.S177S	.	.	129	45	166	1	.	91
LILRA3	11026	hgsc.bcm.edu;broad.mit.edu;ucsc.edu	37	19	54803147	54803147	+	Nonsense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LILRA3	NM_006865	exon4	c.C530G	p.S177X	.	.	129	46	167	0	.	91
LILRB3	11025	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	54721082	54721082	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LILRB3	NM_001081450	exon13	c.T1779C	p.D593D	.	.	166	80	176	0	.	93
LIPI	149998	broad.mit.edu;ucsc.edu;bcgsc.ca	37	21	15516949	15516949	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LIPI	NM_198996	exon9	c.A1353G	p.P451P	.	.	229	80	229	1	.	70
LMBRD1	55788	hgsc.bcm.edu;bcgsc.ca	37	6	70411411	70411411	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LMBRD1	NM_018368	exon11	c.1007delG	p.G336fs	.	.	242	99	213	0	.	91
LMX1B	4010	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	129455877	129455877	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LMX1B	NM_001174146	exon5	c.A816T	p.A272A	.	.	88	37	145	0	.	90
LOC100128164	0	broad.mit.edu;bcgsc.ca	37	3	169663993	169663993	+	RNA	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	63	23	77	0	.	.
LOC100130700	0	bcgsc.ca	37	16	34741037	34741037	+	RNA	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	111	43	100	0	.	.
LOC100507377	0	bcgsc.ca	37	12	74565413	74565413	+	RNA	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	17	5	19	0	.	.
LOC150935	0	mdanderson.org	37	2	240702026	240702026	+	RNA	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	351	159	469	0	.	.
LOC284933	0	bcgsc.ca;mdanderson.org	37	22	48935257	48935257	+	RNA	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	67	30	107	1	.	.
LOC389458	0	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	5112652	5112652	+	RNA	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	93	41	131	0	.	.
LOC392196	0	broad.mit.edu	37	8	11985933	11985933	+	RNA	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	6	4	14	0	.	.
LRFN5	145581	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	42356398	42356398	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRFN5	NM_152447	exon3	c.C570A	p.T190T	.	.	91	38	86	0	.	97
LRIT1	26103	ucsc.edu;bcgsc.ca	37	10	85992413	85992413	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRIT1	NM_015613	exon4	c.G1142T	p.R381M	.	.	193	111	160	2	.	90
LRIT3	345193	broad.mit.edu	37	4	110772808	110772808	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRIT3	NM_198506	exon2	c.A265T	p.T89S	.	.	129	6	137	0	.	90
LRRC37A6P	387646	broad.mit.edu;ucsc.edu	37	10	27536081	27536081	+	RNA	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	18	6	15	0	.	.
LRRC46	90506	broad.mit.edu;bcgsc.ca	37	17	45911898	45911898	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRRC46	NM_033413	exon3	c.G224A	p.G75E	.	.	90	7	113	1	.	91
LRRC4B	94030	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	51022208	51022208	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRRC4B	NM_001080457	exon3	c.C762T	p.S254S	.	.	66	21	77	0	.	205
LRRC7	57554	bcgsc.ca	37	1	70504419	70504419	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRRC7	NM_020794	exon19	c.2798delC	p.S933fs	.	.	258	109	302	1	.	163
LRRIQ1	84125	broad.mit.edu	37	12	85450316	85450316	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRRIQ1	NM_001079910	exon8	c.A1745G	p.K582R	.	.	383	5	294	0	.	95
LRRIQ1	84125	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	85518207	85518207	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRRIQ1	NM_001079910	exon17	c.G3917T	p.S1306I	.	.	76	32	70	0	.	95
LRRIQ3	127255	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	74621535	74621535	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRRIQ3	NM_001105659	exon4	c.G589A	p.E197K	.	.	347	135	327	0	.	92
LRRK1	79705	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	101523888	101523888	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRRK1	NM_024652	exon4	c.G417T	p.L139F	.	.	65	24	89	0	.	602
LRRK1	79705	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	101595197	101595197	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRRK1	NM_024652	exon27	c.C4101A	p.A1367A	.	.	125	57	156	0	.	602
LRRK2	120892	broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	40760830	40760830	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRRK2	NM_198578	exon50	c.G7413A	p.L2471L	.	.	360	140	429	2	.	533
LRTM1	57408	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	54958771	54958771	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LRTM1	NM_020678	exon2	c.A479T	p.Q160L	.	.	140	123	187	0	.	90
LTBP4	8425	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	41133127	41133127	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LTBP4	.	.	.	.	.	.	44	13	45	0	.	93
LY9	4063	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	160784465	160784465	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LY9	NM_001261457	exon4	c.T986C	p.I329T	.	.	265	163	164	1	.	91
LYPD5	284348	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	44306498	44306498	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	LYPD5	NM_001031749	exon1	c.G35T	p.C12F	.	.	38	15	68	0	.	90
MAB21L1	4081	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	36049699	36049699	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MAB21L1	NM_005584	exon1	c.C577A	p.P193T	.	.	34	12	55	0	.	92
MAB21L2	10586	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	151504564	151504564	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MAB21L2	NM_006439	exon1	c.T383C	p.I128T	.	.	58	20	55	0	.	91
MACF1	23499	ucsc.edu	37	1	39549947	39549947	+	Silent	SNP	T	T	A	rs449805		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MACF1	NM_012090	exon3	c.T57A	p.S19S	.	.	76	12	93	0	T|1.000;A|0.000	165
MAEL	84944	broad.mit.edu;bcgsc.ca;mdanderson.org	37	1	166974609	166974609	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MAEL	NM_032858	exon8	c.A820C	p.M274L	.	.	407	20	249	1	.	91
MAGEB5	347541	hgsc.bcm.edu;bcgsc.ca;mdanderson.org	37	X	26235588	26235588	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MAGEB5	NM_001271752	exon2	c.T170C	p.M57T	.	.	132	111	124	0	.	109
MAGEC3	139081	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	140969387	140969387	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MAGEC3	NM_138702	exon4	c.C714T	p.G238G	.	.	141	60	89	0	.	555
MAGEE2	139599	broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	75004449	75004449	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MAGEE2	NM_138703	exon1	c.T438C	p.V146V	.	.	112	49	74	1	.	132
MALT1	10892	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	56414872	56414872	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MALT1	NM_006785	exon17	c.A2273G	p.H758R	.	.	95	30	95	1	.	660
MAML3	55534	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	140651774	140651774	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MAML3	NM_018717	exon4	c.C2115A	p.S705S	.	.	112	65	97	0	.	455
MAP2	4133	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	210557752	210557752	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MAP2	NM_002374	exon7	c.T858A	p.P286P	.	.	141	60	165	0	.	591
MAP3K12	7786	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	53878895	53878895	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MAP3K12	NM_001193511	exon6	c.C1084T	p.L362L	.	.	123	52	126	0	.	604
MARS2	92935	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	198570872	198570872	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MARS2	NM_138395	exon1	c.A743T	p.E248V	.	.	106	43	122	2	.	92
MBL2	4153	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	54528161	54528161	+	Silent	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MBL2	NM_000242	exon4	c.T483G	p.S161S	.	.	153	46	144	0	.	91
MC5R	4161	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	13826194	13826194	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MC5R	NM_005913	exon1	c.A430C	p.I144L	.	.	84	32	105	0	.	526
MCF2	4168	broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	138701843	138701843	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MCF2	NM_001171876	exon10	c.T890A	p.L297Q	.	.	784	347	430	2	.	227
MCM9	254394	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	119136767	119136767	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MCM9	NM_017696	exon12	c.A2652G	p.P884P	.	.	47	17	84	0	.	515
MED13L	23389	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	116446847	116446847	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MED13L	NM_015335	exon10	c.A1371G	p.S457S	.	.	123	41	122	0	.	232
MEFV	4210	broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	3306451	3306451	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MEFV	NM_000243	exon1	c.A137T	p.Q46L	.	.	138	67	136	1	.	228
MEN1	4221	bcgsc.ca	37	11	64573793	64573793	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	MEN1,NS,carcinoid-endocrine_tumour,-1	MEN1	NM_130800	exon7	c.975delC	p.P325fs	.	.	94	69	202	1	.	3017
MEN1	4221	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	64575092	64575092	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MEN1	NM_130800	exon4	c.A730G	p.M244V	.	.	42	31	99	0	.	3017
MEP1B	4225	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	29793483	29793483	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MEP1B	NM_005925	exon11	c.A1540C	p.N514H	.	.	89	35	89	0	.	92
METTL13	51603	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	171753199	171753199	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	METTL13	NM_015935	exon2	c.G473T	p.C158F	.	.	190	49	112	0	.	91
MFAP4	4239	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	19289686	19289686	+	Silent	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MFAP4	NM_001198695	exon3	c.C249G	p.P83P	.	.	137	59	137	0	.	514
MGA	23269	bcgsc.ca	37	15	42058279	42058279	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MGA	NM_001164273	exon24	c.G7999C	p.G2667R	.	.	397	165	439	5	.	522
MGAM	8972	broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	141752594	141752594	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MGAM	NM_004668	exon26	c.C2969T	p.S990F	.	.	96	34	111	1	.	70
MGAM	8972	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	141755835	141755835	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MGAM	NM_004668	exon29	c.C3519T	p.Y1173Y	.	.	54	19	70	0	.	70
MGAM	8972	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	141764190	141764190	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MGAM	NM_004668	exon37	c.A4352G	p.E1451G	.	.	70	29	100	0	.	70
MGAT5B	146664	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	74921070	74921070	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MGAT5B	NM_198955	exon8	c.C1081A	p.R361R	.	.	54	20	78	0	.	93
MICALL1	85377	broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	38321666	38321666	+	Splice_Site	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MICALL1	NM_033386	exon8	c.1083-2A>T	.	.	.	111	46	149	1	.	153
MIR206	406989	broad.mit.edu;ucsc.edu;mdanderson.org	37	6	52009189	52009189	+	RNA	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	194	37	149	1	.	.
MKL2	57496	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	14341108	14341108	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MKL2	NM_014048	exon12	c.C1991T	p.P664L	.	.	72	26	99	0	.	95
MKRN7P	7686	ucsc.edu;bcgsc.ca	37	20	45093458	45093458	+	RNA	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	31	11	31	0	.	.
MLL2	8085	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	49432023	49432023	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MLL2	NM_003482	exon34	c.A9116G	p.D3039G	.	.	138	59	143	0	.	612
MLL3	58508	bcgsc.ca	37	7	151970877	151970877	+	Missense_Mutation	SNP	G	G	A	rs138627563	byfrequency	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MLL3	NM_170606	exon7	c.C925T	p.P309S	.	.	298	11	297	6	G|0.978;A|0.022	1398
MLLT3	4300	broad.mit.edu	37	9	20413747	20413747	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MLLT3	NM_004529	exon5	c.T1097C	p.V366A	.	.	153	6	254	0	.	660
MLX	6945	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	40721541	40721541	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MLX	NM_170607	exon6	c.G555T	p.Q185H	.	.	79	32	83	0	.	90
MOV10L1	54456	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	50580530	50580530	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MOV10L1	NM_018995	exon16	c.C2091T	p.D697D	.	.	79	37	85	0	.	93
MPHOSPH10	10199	ucsc.edu;bcgsc.ca	37	2	71376544	71376544	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MPHOSPH10	NM_005791	exon10	c.A1857G	p.L619L	.	.	468	185	483	2	.	93
MROH5	389690	broad.mit.edu;ucsc.edu;mdanderson.org	37	8	142444651	142444651	+	RNA	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	52	12	30	0	.	.
MRPS16	51021	ucsc.edu	37	10	75008797	75008797	+	RNA	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MRPS16	.	.	.	.	.	.	203	1	126	0	.	90
MRPS27	23107	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	71519592	71519592	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MRPS27	NM_015084	exon10	c.A923T	p.Q308L	.	.	97	48	121	0	.	90
MTMR10	54893	bcgsc.ca	37	15	31233790	31233790	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MTMR10	NM_017762	exon16	c.T2217C	p.F739F	.	.	90	34	97	2	.	91
MTMR11	10903	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	149902441	149902441	+	Splice_Site	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MTMR11	NM_181873	exon15	c.1249-2A>G	.	.	.	76	11	35	0	.	90
MTUS2	23281	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	30066785	30066785	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MTUS2	NM_001033602	exon10	c.T3538C	p.L1180L	.	.	98	35	99	0	.	218
MUC16	94025	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	9048117	9048117	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MUC16	NM_024690	exon5	c.A33514G	p.I11172V	.	.	71	28	112	0	.	566
MUC20	200958	broad.mit.edu	37	3	195451813	195451813	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_152673	exon2	c.A339T	p.S113S	.	.	661	84	813	0	.	.
MUC21	394263	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	30955854	30955854	+	Silent	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MUC21	NM_001010909	exon3	c.A1584C	p.P528P	.	.	255	42	189	0	.	92
MUC2	4583	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	1087958	1087958	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MUC2	NM_002457	exon25	c.T3433C	p.C1145R	.	.	61	25	94	0	.	90
MUC4	4585	broad.mit.edu;mdanderson.org	37	3	195509331	195509331	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MUC4	NM_018406	exon2	c.G9120A	p.P3040P	.	.	138	17	190	0	.	90
MUC4	4585	mdanderson.org	37	3	195509235	195509235	+	Silent	SNP	C	C	T	rs77084193	alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MUC4	NM_018406	exon2	c.G9216A	p.P3072P	.	.	151	18	208	0	C|0.250;A|0.750	90
MUC6	4588	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	11	1031239	1031239	+	Nonsense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MUC6	NM_005961	exon5	c.C504G	p.Y168X	.	.	124	51	121	0	.	23
MURC	347273	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	103348527	103348527	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MURC	NM_001018116	exon2	c.A889G	p.I297V	.	.	120	50	153	1	.	69
MX2	4600	broad.mit.edu;ucsc.edu;bcgsc.ca	37	21	42762601	42762601	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MX2	NM_002463	exon6	c.A842T	p.E281V	.	.	81	38	112	2	.	92
MYH13	8735	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	10212854	10212854	+	Silent	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MYH13	NM_003802	exon34	c.C4950G	p.V1650V	.	.	47	21	49	0	.	6
MYH4	4622	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	10351254	10351254	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MYH4	NM_017533	exon34	c.C4846A	p.L1616M	.	.	155	55	191	1	.	102
MYH6	4624	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	23865974	23865974	+	Silent	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MYH6	NM_002471	exon19	c.A2221C	p.R741R	.	.	110	40	124	0	.	94
MYH7	4625	ucsc.edu;bcgsc.ca	37	14	23901694	23901694	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MYH7	NM_000257	exon6	c.T524G	p.L175R	.	.	121	52	148	2	.	94
MYO15A	51168	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	18061879	18061879	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MYO15A	NM_016239	exon51	c.G9010T	p.A3004S	.	.	190	80	203	2	.	97
MYO1D	4642	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	31048069	31048069	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MYO1D	NM_015194	exon15	c.C1885T	p.R629C	.	.	125	10	155	0	.	137
MYO3A	53904	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	26465717	26465717	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MYO3A	NM_017433	exon31	c.G4381T	p.G1461C	.	.	98	5	87	0	.	1007
MYO3A	53904	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	26377316	26377316	+	Missense_Mutation	SNP	G	G	T	rs200209381	alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MYO3A	NM_017433	exon15	c.G1544T	p.R515L	.	.	166	42	106	0	G|0.999;A|0.000	1007
MYT1	4661	broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	62844964	62844964	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MYT1	NM_004535	exon10	c.C1595A	p.P532H	.	.	59	33	64	1	.	704
MYT1L	23040	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	2	1983303	1983303	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	MYT1L	NM_015025	exon7	c.G79T	p.E27X	.	.	92	32	141	0	.	95
NABP2	79035	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	56619991	56619991	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_024068	exon5	c.A319G	p.N107D	.	.	165	65	188	0	.	.
NACA2	342538	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	17	59667968	59667968	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NACA2	NM_199290	exon1	c.A574T	p.R192X	.	.	110	43	109	0	.	91
NAGK	55577	broad.mit.edu	37	2	71297920	71297920	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NAGK	NM_017567	exon3	c.G302T	p.R101M	.	.	188	5	195	0	.	115
NANOG	79923	broad.mit.edu	37	12	7947412	7947412	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NANOG	NM_024865	exon4	c.C639T	p.I213I	.	.	275	95	258	0	.	90
NANOS3	342977	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	13988465	13988465	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NANOS3	NM_001098622	exon1	c.T403A	p.Y135N	.	.	52	29	77	0	.	69
NANP	140838	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	25596957	25596957	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NANP	NM_152667	exon2	c.G351T	p.M117I	.	.	89	37	121	0	.	90
NAV3	89795	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	78513452	78513452	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NAV3	NM_014903	exon15	c.C3476G	p.T1159S	.	.	132	56	169	0	.	279
NBEA	26960	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	35729982	35729982	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NBEA	NM_015678	exon19	c.T2517A	p.I839I	.	.	90	18	62	0	.	144
NBEAL2	23218	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	47042832	47042832	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NBEAL2	NM_015175	exon29	c.G4548T	p.L1516L	.	.	41	36	56	0	.	69
NBR1	4077	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	41349033	41349033	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NBR1	NM_031862	exon16	c.A1936G	p.T646A	.	.	187	11	201	0	.	130
NCOA6	23054	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	20	33324500	33324500	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NCOA6	NM_014071	exon12	c.A5956T	p.R1986X	.	.	123	54	146	0	.	292
NCSTN	23385	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	160314603	160314606	+	Frame_Shift_Del	DEL	GATT	GATT	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	GATT	GATT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NCSTN	NM_015331	exon2	c.177_180del	p.59_60del	.	.	183	116	124	0	.	658
NEB	4703	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	152522831	152522831	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NEB	NM_004543	exon41	c.T4804A	p.Y1602N	.	.	86	34	93	0	.	145
NEBL	10529	broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	21120179	21120179	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NEBL	NM_006393	exon16	c.C1617A	p.S539R	.	.	69	38	77	1	.	92
NEBL	10529	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	21178773	21178773	+	Splice_Site	SNP	C	C	A	rs139581346	byfrequency;alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NEBL	NM_006393	exon4	c.258+1G>T	.	.	.	299	170	209	0	C|0.999;T|0.001	92
NEFH	4744	ucsc.edu	37	22	29885564	29885564	+	Silent	SNP	A	A	G	rs202065964		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NEFH	NM_021076	exon4	c.A1935G	p.E645E	.	.	158	51	133	1	.	90
NEFH	4744	ucsc.edu	37	22	29885594	29885594	+	Silent	SNP	A	A	T	rs79235463	byfrequency	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NEFH	NM_021076	exon4	c.A1965T	p.P655P	.	.	214	62	236	0	A|0.500;T|0.500	90
NEO1	4756	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	73564819	73564819	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NEO1	NM_001172623	exon19	c.G2881C	p.V961L	.	.	91	35	123	0	.	116
NES	10763	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	156641502	156641502	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NES	NM_006617	exon4	c.A2478T	p.L826L	.	.	194	126	130	1	.	520
NEURL	9148	ucsc.edu;bcgsc.ca	37	10	105350031	105350031	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NEURL	NM_004210	exon6	c.T1627A	p.Y543N	.	.	130	79	118	3	.	226
NEURL1B	54492	broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	172097160	172097160	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001142651	exon2	c.A404T	p.E135V	.	.	13	4	27	0	.	.
NFAT5	10725	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	16	69703941	69703943	+	In_Frame_Del	DEL	AGA	AGA	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	AGA	AGA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NFAT5	NM_001113178	exon8	c.1431_1433del	p.477_478del	.	.	235	85	308	0	.	90
NLGN4X	57502	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	6069058	6069058	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NLGN4X	NM_181332	exon2	c.C450A	p.N150K	.	.	51	41	74	0	.	195
NLRP10	338322	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	7981937	7981937	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NLRP10	NM_176821	exon2	c.A1222T	p.R408W	.	.	57	23	57	0	.	209
NME1	4830	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	49239133	49239133	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NME1	NM_198175	exon6	c.A461T	p.E154V	.	.	104	53	131	0	.	251
NOBOX	135935	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	144096135	144096135	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NOBOX	NM_001080413	exon8	c.T1377C	p.P459P	.	.	159	76	171	3	.	69
NOL6	65083	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	33469275	33469275	+	Silent	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NOL6	NM_022917	exon6	c.G792C	p.P264P	.	.	98	45	116	0	.	92
NOS1	4842	broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	117710243	117710243	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NOS1	NM_000620	exon10	c.A1786G	p.T596A	.	.	130	56	141	1	.	154
NOSTRIN	115677	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	169681160	169681160	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NOSTRIN	NM_001039724	exon3	c.A130C	p.S44R	.	.	600	221	701	0	.	90
NOTCH3	4854	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	15281192	15281192	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NOTCH3	NM_000435	exon27	c.T5064C	p.S1688S	.	.	51	24	86	0	.	855
NOVA2	4858	broad.mit.edu;mdanderson.org	37	19	46444123	46444123	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NOVA2	NM_002516	exon4	c.G477A	p.Q159Q	.	.	10	3	32	0	.	226
NPAP1	23742	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	15	24921224	24921224	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_018958	exon1	c.G210T	p.R70S	.	.	46	21	39	0	.	.
NPAP1	23742	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	24921716	24921716	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_018958	exon1	c.G702A	p.L234L	.	.	61	32	57	0	.	.
NPAS3	64067	broad.mit.edu;ucsc.edu	37	14	34270267	34270267	+	Nonsense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NPAS3	NM_001164749	exon12	c.C2754G	p.Y918X	.	.	100	36	116	1	.	93
NPAS3	64067	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	34269082	34269082	+	Silent	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NPAS3	NM_001164749	exon12	c.G1569C	p.P523P	.	.	121	54	152	0	.	93
NRCAM	4897	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	107820770	107820770	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NRCAM	NM_001037132	exon22	c.G2748A	p.P916P	.	.	104	62	105	0	.	156
NRDE2	55051	ucsc.edu;bcgsc.ca	37	14	90744720	90744720	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_017970	exon14	c.G3455T	p.R1152L	.	.	106	42	141	2	.	.
NRXN1	9378	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	2	50149221	50149221	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NRXN1	NM_001135659	exon24	c.C4505A	p.S1502X	.	.	125	53	126	0	.	92
NSMCE1	197370	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	27268833	27268833	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NSMCE1	NM_145080	exon2	c.A59G	p.Q20R	.	.	106	49	146	0	.	90
NSUN4	387338	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	46810731	46810732	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NSUN4	NM_199044	exon2	c.352_353insT	p.P118fs	.	.	82	34	74	0	.	90
NTNG2	84628	broad.mit.edu	37	9	135114574	135114574	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NTNG2	NM_032536	exon6	c.A1138G	p.T380A	.	.	77	4	104	0	.	90
NTRK3	4916	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	88472454	88472454	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NTRK3	NM_001012338	exon17	c.T2101A	p.S701T	.	.	162	70	197	0	.	3538
NUDC	10726	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	27268120	27268120	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NUDC	NM_006600	exon3	c.A332G	p.E111G	.	.	175	15	200	0	.	91
NUP153	9972	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	17706588	17706588	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NUP153	NM_005124	exon1	c.G31T	p.G11C	.	.	87	9	57	0	.	637
NUP210	23225	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	13401819	13401819	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NUP210	NM_024923	exon15	c.A2105G	p.N702S	.	.	115	101	161	0	.	256
NYNRIN	57523	broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	24882219	24882219	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	NYNRIN	NM_025081	exon7	c.G2659A	p.A887T	.	.	102	47	152	1	.	3
OBSCN	84033	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	228462464	228462464	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OBSCN	NM_001271223	exon24	c.G7000T	p.D2334Y	.	.	96	16	73	0	.	403
OBSCN	84033	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	228559946	228559946	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OBSCN	NM_001271223	exon105	c.A24338T	p.E8113V	.	.	192	39	113	0	.	403
OLFML2A	169611	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	127549471	127549471	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OLFML2A	NM_182487	exon2	c.A308G	p.E103G	.	.	70	35	76	0	.	68
OPA1	4976	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	3	193332727	193332727	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OPA1	NM_130832	exon2	c.A248T	p.Q83L	.	.	246	17	280	0	.	68
OPA1	4976	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	3	193374929	193374929	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OPA1	NM_130837	exon23	c.G2239T	p.E747X	.	.	131	64	191	0	.	68
OR10A5	144124	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	6867208	6867208	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR10A5	NM_178168	exon1	c.G295T	p.A99S	.	.	222	92	237	0	.	71
OR10K1	391109	broad.mit.edu	37	1	158435496	158435496	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR10K1	NM_001004473	exon1	c.A145G	p.I49V	.	.	358	8	220	0	.	69
OR10Z1	128368	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	158577013	158577013	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR10Z1	NM_001004478	exon1	c.C785A	p.P262H	.	.	231	45	125	2	.	70
OR14A16	284532	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	247978552	247978552	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR14A16	NM_001001966	exon1	c.C480A	p.G160G	.	.	230	52	129	1	.	46
OR1A1	8383	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	17	3119514	3119514	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR1A1	NM_014565	exon1	c.C600A	p.Y200X	.	.	85	36	99	0	.	70
OR2A12	346525	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	143792917	143792917	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR2A12	NM_001004135	exon1	c.C717A	p.T239T	.	.	136	44	173	0	.	92
OR2AG1	144125	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	6806883	6806883	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR2AG1	NM_001004489	exon1	c.C615T	p.T205T	.	.	104	43	83	0	.	68
OR2F1	26211	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	143657623	143657623	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR2F1	NM_012369	exon1	c.T560A	p.L187Q	.	.	161	56	172	0	.	71
OR2F2	135948	bcgsc.ca	37	7	143633258	143633258	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR2F2	NM_001004685	exon1	c.933delA	p.L311fs	.	.	59	26	50	1	.	94
OR2G3	81469	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	247769234	247769234	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR2G3	NM_001001914	exon1	c.C347A	p.A116D	.	.	288	202	186	1	.	68
OR2G6	391211	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	248685871	248685871	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR2G6	NM_001013355	exon1	c.T924C	p.S308S	.	.	74	8	37	0	.	71
OR2M3	127062	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	248366439	248366439	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR2M3	NM_001004689	exon1	c.C70T	p.H24Y	.	.	563	114	339	0	.	70
OR2M7	391196	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	248487089	248487089	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR2M7	NM_001004691	exon1	c.A782T	p.Q261L	.	.	374	82	249	1	.	70
OR2T4	127074	bcgsc.ca	37	1	248524967	248524967	+	Missense_Mutation	SNP	A	A	G	rs200915140		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR2T4	NM_001004696	exon1	c.A85G	p.M29V	.	.	195	18	198	3	.	68
OR4D2	124538	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	56247411	56247411	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR4D2	NM_001004707	exon1	c.A395G	p.Y132C	.	.	73	28	74	0	.	114
OR4K17	390436	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	20586546	20586546	+	Silent	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR4K17	NM_001004715	exon1	c.A981C	p.I327I	.	.	70	33	99	1	.	71
OR51A4	401666	bcgsc.ca	37	11	4967735	4967735	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR51A4	NM_001005329	exon1	c.T596C	p.I199T	.	.	776	259	787	3	.	71
OR51L1	119682	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	5020779	5020779	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR51L1	NM_001004755	exon1	c.A567G	p.L189L	.	.	127	55	168	2	.	69
OR51V1	283111	ucsc.edu;bcgsc.ca	37	11	5221747	5221747	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR51V1	NM_001004760	exon1	c.C184A	p.P62T	.	.	88	36	136	2	.	69
OR56A5	390084	hgsc.bcm.edu;bcgsc.ca;mdanderson.org	37	11	5988980	5988980	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001146033	exon1	c.A745T	p.I249F	.	.	157	63	195	0	.	.
OR6B1	135946	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	143701238	143701238	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR6B1	NM_001005281	exon1	c.T149A	p.L50Q	.	.	165	64	204	0	.	91
OR6K2	81448	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	158669520	158669520	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR6K2	NM_001005279	exon1	c.A923G	p.Q308R	.	.	437	84	229	1	.	69
OR6T1	219874	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	123814484	123814484	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR6T1	NM_001005187	exon1	c.A62T	p.H21L	.	.	104	50	137	1	.	69
OR8G2	26492	hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	124095466	124095466	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001007249	exon1	c.T69A	p.T23T	.	.	126	53	168	0	.	.
OR8H2	390151	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	55873220	55873220	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR8H2	NM_001005200	exon1	c.G702T	p.K234N	.	.	182	73	157	1	.	70
OR8J1	219477	broad.mit.edu	37	11	56127949	56127949	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR8J1	NM_001005205	exon1	c.T227A	p.V76D	.	.	252	7	278	0	.	70
OR8J3	81168	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	55904587	55904587	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR8J3	NM_001004064	exon1	c.C608A	p.A203E	.	.	76	33	53	0	.	70
OR8J3	81168	hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	55904573	55904573	+	Missense_Mutation	SNP	C	C	A	rs1384094	byfrequency	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR8J3	NM_001004064	exon1	c.G622T	p.V208F	.	.	84	36	48	0	C|0.992;A|0.008	70
OR8K1	390157	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	56113774	56113774	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OR8K1	NM_001002907	exon1	c.T260A	p.M87K	.	.	149	53	145	0	.	70
OSGIN1	29948	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	83998905	83998905	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OSGIN1	NM_182981	exon6	c.G727A	p.V243I	.	.	35	15	42	0	.	68
OSR1	130497	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	19552136	19552136	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OSR1	NM_145260	exon3	c.A701G	p.Q234R	.	.	115	48	108	0	.	257
OTOGL	283310	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	80750668	80750668	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_173591	exon48	c.A5966T	p.E1989V	.	.	269	120	247	1	.	.
OTUD6A	139562	bcgsc.ca	37	X	69282892	69282892	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OTUD6A	NM_207320	exon1	c.G518T	p.R173L	.	.	186	86	104	2	.	541
OXGR1	27199	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	97639601	97639601	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	OXGR1	NM_080818	exon4	c.C413A	p.P138Q	.	.	107	41	150	1	.	70
P2RY10	27334	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	78216943	78216943	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	P2RY10	NM_198333	exon2	c.C926A	p.A309D	.	.	188	84	125	0	.	542
P2RY6	5031	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	73007940	73007940	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	P2RY6	NM_176796	exon4	c.T377A	p.L126Q	.	.	38	8	25	0	.	501
PA2G4P4	647033	broad.mit.edu;ucsc.edu	37	3	156528254	156528254	+	RNA	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	26	12	29	0	.	.
PABPC4L	132430	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	4	135121999	135121999	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001114734	exon2	c.T350A	p.L117X	.	.	71	31	78	0	.	.
PAK2	5062	bcgsc.ca	37	3	196529917	196529917	+	Silent	SNP	A	A	G	rs183020057	by1000genomes	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PAK2	NM_002577	exon4	c.A318G	p.L106L	.	.	91	6	96	1	A|1.000;G|0.000	957
PAK6	56924	bcgsc.ca	37	15	40557098	40557098	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PAK6	NM_001128629	exon3	c.C112A	p.P38T	.	.	430	166	607	4	.	996
PAK7	57144	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	9525119	9525119	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PAK7	NM_177990	exon8	c.T1766C	p.F589S	.	.	139	48	169	0	.	1434
PARD3	56288	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	34759158	34759158	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PARD3	NM_001184788	exon4	c.C437T	p.P146L	.	.	130	34	117	0	.	92
PARD3B	117583	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	206036933	206036933	+	Splice_Site	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PARD3B	NM_057177	exon12	c.1621-2A>T	.	.	.	128	50	148	0	.	140
PARD6G	84552	bcgsc.ca	37	18	77918344	77918344	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PARD6G	NM_032510	exon3	c.C441A	p.I147I	.	.	50	4	69	0	.	90
PCBP3	54039	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	47320533	47320533	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCBP3	NM_001130141	exon4	c.A218G	p.E73G	.	.	222	66	308	1	.	227
PCDH11X	27328	hgsc.bcm.edu;broad.mit.edu	37	X	91131828	91131828	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCDH11X	NM_001168363	exon2	c.A589T	p.K197X	.	.	554	238	333	1	.	193
PCDH11X	27328	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	91873264	91873264	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCDH11X	NM_032968	exon7	c.T3369A	p.A1123A	.	.	245	116	112	0	.	193
PCDHA3	56145	broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	140183244	140183244	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCDHA3	NM_031497	exon1	c.T2462A	p.L821Q	.	.	93	36	82	1	.	98
PCDHA5	56143	broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	140202294	140202294	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCDHA5	NM_018908	exon1	c.T934G	p.Y312D	.	.	147	60	150	1	.	137
PCDHAC1	56135	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140308412	140308412	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCDHAC1	NM_031882	exon1	c.A1935G	p.P645P	.	.	74	23	74	0	.	28
PCDHB10	56126	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140572771	140572771	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCDHB10	NM_018930	exon1	c.G646T	p.D216Y	.	.	133	51	147	0	.	92
PCDHB6	56130	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140531986	140531986	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCDHB6	NM_018939	exon1	c.G2148T	p.R716S	.	.	45	22	57	0	.	91
PCDHB7	56129	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	140553027	140553027	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCDHB7	NM_018940	exon1	c.A611T	p.E204V	.	.	168	91	161	0	.	95
PCDHGA3	56112	broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	140723872	140723872	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCDHGA3	NM_032011	exon1	c.A272C	p.D91A	.	.	142	54	164	1	.	68
PCLO	27445	bcgsc.ca	37	7	82785057	82785057	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCLO	NM_014510	exon2	c.C900T	p.S300S	.	.	154	54	167	6	.	29
PCLO	27445	broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	82580709	82580709	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCLO	NM_014510	exon6	c.A9195T	p.T3065T	.	.	93	45	125	1	.	29
PCLO	27445	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	82467649	82467649	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCLO	NM_014510	exon15	c.A14107G	p.N4703D	.	.	66	22	72	0	.	29
PCLO	27445	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	82581285	82581285	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCLO	NM_014510	exon5	c.C8984A	p.S2995Y	.	.	168	85	161	0	.	29
PCLO	27445	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	82764725	82764725	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PCLO	NM_014510	exon3	c.G2141T	p.G714V	.	.	151	71	167	0	.	29
PDGFRA	5156	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	55152024	55152024	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PDGFRA	NM_006206	exon18	c.T2456G	p.L819R	.	.	52	21	51	1	.	9497
PDPR	55066	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	70190550	70190550	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PDPR	NM_017990	exon19	c.C2408A	p.A803D	.	.	83	34	111	1	.	135
PEF1	553115	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	32101091	32101091	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PEF1	NM_012392	exon2	c.A57T	p.G19G	.	.	270	105	308	0	.	68
PEG3	5178	hgsc.bcm.edu;broad.mit.edu	37	19	57327366	57327366	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PEG3	NM_001146184	exon9	c.A2444G	p.H815R	.	.	148	6	177	0	.	164
PENK	5179	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	57354153	57354153	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PENK	NM_001135690	exon4	c.T482A	p.L161Q	.	.	202	26	173	1	.	517
PHACTR3	116154	broad.mit.edu;bcgsc.ca	37	20	58180075	58180075	+	Silent	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PHACTR3	NM_080672	exon1	c.C6G	p.A2A	.	.	18	6	22	0	.	93
PHC1	1911	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	9083485	9083485	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PHC1	NM_004426	exon7	c.C1067A	p.T356K	.	.	121	36	79	0	.	154
PHF13	148479	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	6679911	6679911	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PHF13	NM_153812	exon3	c.A190G	p.T64A	.	.	261	94	268	3	.	514
PHF3	23469	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	64389990	64389990	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PHF3	NM_015153	exon2	c.A334T	p.R112W	.	.	124	60	149	0	.	229
PHF6	84295	ucsc.edu;bcgsc.ca;mdanderson.org	37	X	133547942	133547942	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PHF6	NM_032335	exon7	c.A678G	p.R226R	.	.	631	311	342	2	.	131
PHKB	5257	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	47622887	47622887	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PHKB	NM_000293	exon10	c.C942G	p.S314R	.	.	73	26	68	0	.	154
PIK3R2	5296	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	18273890	18273890	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PIK3R2	NM_005027	exon10	c.A1223G	p.E408G	.	.	147	50	178	0	.	1311
PIP5K1B	8395	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	71555562	71555562	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PIP5K1B	NM_003558	exon14	c.C1358A	p.A453D	.	.	147	64	146	0	.	240
PKHD1L1	93035	bcgsc.ca	37	8	110499010	110499010	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PKHD1L1	NM_177531	exon59	c.A9840T	p.V3280V	.	.	395	180	236	4	.	145
PKHD1L1	93035	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	110509272	110509272	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PKHD1L1	NM_177531	exon64	c.C10452G	p.C3484W	.	.	318	68	140	0	.	145
PLA2G3	50487	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	31533830	31533830	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PLA2G3	NM_015715	exon4	c.G932T	p.G311V	.	.	90	37	144	0	.	226
PLCB4	5332	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	9288511	9288511	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PLCB4	NM_182797	exon2	c.T50G	p.L17W	.	.	80	51	80	0	.	274
PLCB4	5332	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	9352961	9352961	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PLCB4	NM_182797	exon9	c.T597A	p.I199I	.	.	165	80	186	0	.	274
PLCXD2	257068	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	111394182	111394182	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PLCXD2	NM_001185106	exon1	c.C90A	p.V30V	.	.	213	91	266	0	.	227
PLD1	5337	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	171395376	171395376	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PLD1	NM_002662	exon17	c.A1976G	p.Q659R	.	.	113	56	147	0	.	660
PLEKHG4B	153478	ucsc.edu;bcgsc.ca	37	5	140560	140560	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PLEKHG4B	NM_052909	exon1	c.T138A	p.S46S	.	.	263	130	286	3	.	228
PLEKHH1	57475	broad.mit.edu;bcgsc.ca;mdanderson.org	37	14	68038976	68038976	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PLEKHH1	NM_020715	exon11	c.C1710T	p.D570D	.	.	34	15	39	0	.	22
PLEKHS1	79949	broad.mit.edu;bcgsc.ca	37	10	115535616	115535616	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_024889	exon11	c.G1082T	p.G361V	.	.	210	7	142	0	.	.
PLIN4	729359	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	4510630	4510630	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PLIN4	NM_001080400	exon3	c.G3300T	p.K1100N	.	.	63	30	65	0	.	68
PLXNA4	91584	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	131908376	131908376	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PLXNA4	NM_020911	exon9	c.A2007G	p.P669P	.	.	84	50	135	0	.	91
PNMAL1	55228	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	46974216	46974216	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PNMAL1	NM_018215	exon2	c.T77C	p.L26S	.	.	101	38	109	2	.	68
PNPLA1	285848	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	36238348	36238348	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PNPLA1	NM_001145717	exon1	c.C112T	p.L38L	.	.	401	111	250	2	.	137
POLH	5429	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	43555153	43555153	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	POLH	NM_006502	exon4	c.A417T	p.A139A	.	.	296	83	187	1	.	290
POLQ	10721	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	121208148	121208148	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	POLQ	NM_199420	exon16	c.G3630A	p.Q1210Q	.	.	121	53	109	0	.	664
POM121L2	94026	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	27279131	27279131	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_033482	exon1	c.T819A	p.S273R	.	.	152	30	101	0	.	.
POU3F4	5456	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	82764127	82764127	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	POU3F4	NM_000307	exon1	c.C795A	p.S265R	.	.	367	152	226	1	.	131
PPFIA2	8499	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	82147865	82147865	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PPFIA2	NM_001220476	exon2	c.C136G	p.L46V	.	.	120	49	138	0	.	231
PPFIBP1	8496	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	12	27832961	27832961	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PPFIBP1	NM_177444	exon20	c.T1880A	p.L627X	.	.	74	39	90	0	.	228
PPIG	9360	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	170465241	170465241	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PPIG	NM_004792	exon7	c.A350G	p.K117R	.	.	356	154	378	0	.	92
PPP1R3F	89801	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	49143177	49143177	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PPP1R3F	NM_033215	exon4	c.A2025G	p.I675M	.	.	115	99	134	0	.	229
PPP1R42	286187	broad.mit.edu;bcgsc.ca	37	8	67930067	67930067	+	Splice_Site	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	48	29	36	0	.	.
PPP1R9A	55607	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	94540283	94540283	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PPP1R9A	NM_017650	exon2	c.T858C	p.S286S	.	.	134	59	163	1	.	208
PRAMEF12	390999	hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	12837669	12837669	+	Missense_Mutation	SNP	G	G	A	rs201008398	byfrequency;alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRAMEF12	NM_001080830	exon3	c.G1379A	p.G460D	.	.	275	125	291	0	G|0.993;T|0.007	25
PRB2	653247	broad.mit.edu	37	12	11546586	11546586	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRB2	NM_006248	exon3	c.A426T	p.P142P	.	.	382	7	443	4	.	22
PRB2	653247	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	11546400	11546400	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRB2	NM_006248	exon3	c.A612T	p.P204P	.	.	322	46	369	0	.	22
PREX2	80243	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	68965436	68965436	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PREX2	NM_025170	exon9	c.C1048A	p.H350N	.	.	192	130	142	0	.	390
PRKDC	5591	bcgsc.ca	37	8	48869825	48869825	+	Splice_Site	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRKDC	NM_001081640	exon4	c.232-2A>G	.	.	.	206	128	167	4	.	1515
PRKDC	5591	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	48695065	48695065	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRKDC	.	.	.	.	.	.	59	15	39	0	.	1515
PRKRIR	5612	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	76063253	76063253	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRKRIR	NM_004705	exon5	c.T941A	p.I314K	.	.	387	135	401	1	.	93
PRL	5617	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	22287693	22287693	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRL	NM_000948	exon5	c.C622A	p.H208N	.	.	143	43	63	0	.	90
PRPF4B	8899	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	4057278	4057278	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRPF4B	NM_003913	exon13	c.A2590G	p.K864E	.	.	122	25	64	0	.	1308
PRPS1L1	221823	broad.mit.edu;bcgsc.ca;mdanderson.org	37	7	18066634	18066634	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRPS1L1	NM_175886	exon1	c.A772G	p.I258V	.	.	147	11	173	1	.	1
PRRX2	51450	broad.mit.edu	37	9	132481558	132481558	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRRX2	NM_016307	exon2	c.A308C	p.K103T	.	.	86	4	106	0	.	91
PRSS16	10279	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	27216671	27216671	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRSS16	NM_005865	exon3	c.A283T	p.I95L	.	.	295	57	220	2	.	94
PRSS50	29122	ucsc.edu;bcgsc.ca	37	3	46757130	46757130	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRSS50	NM_013270	exon3	c.G365T	p.R122L	.	.	218	182	338	3	.	90
PRTFDC1	56952	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	25145922	25145922	+	Missense_Mutation	SNP	A	A	T	rs148662493		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRTFDC1	NM_020200	exon6	c.T426A	p.D142E	.	.	164	12	136	0	A|1.000;T|0.000	91
PRTFDC1	56952	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	25226147	25226147	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRTFDC1	NM_020200	exon3	c.T305C	p.M102T	.	.	86	22	79	0	.	91
PRTG	283659	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	55971629	55971629	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRTG	NM_173814	exon7	c.G988T	p.V330F	.	.	104	44	88	0	.	92
PRUNE2	158471	broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	79318669	79318669	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRUNE2	NM_015225	exon9	c.G7860A	p.T2620T	.	.	111	45	141	2	.	157
PRUNE2	158471	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	79325463	79325463	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PRUNE2	NM_015225	exon8	c.G1727T	p.S576I	.	.	74	27	83	0	.	157
PSAP	5660	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	73591653	73591653	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PSAP	NM_002778	exon3	c.A199G	p.K67E	.	.	116	19	85	0	.	91
PSMA4	5685	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	78837269	78837269	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PSMA4	NM_001102667	exon6	c.G346A	p.D116N	.	.	99	39	129	0	.	90
PSMA7	5688	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	20	60718284	60718284	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PSMA7	NM_002792	exon1	c.G76C	p.V26L	.	.	18	14	9	0	.	90
PSMA7	5688	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	20	60718296	60718296	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PSMA7	NM_002792	exon1	c.G64T	p.A22S	.	.	16	12	11	0	.	90
PTCHD1	139411	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	23397834	23397834	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PTCHD1	NM_173495	exon2	c.C478T	p.L160L	.	.	242	204	358	0	.	135
PTER	9317	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	16553155	16553155	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PTER	NM_001001484	exon6	c.T950C	p.L317P	.	.	156	31	123	0	.	92
PTH1R	5745	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	46937344	46937344	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PTH1R	NM_001184744	exon4	c.G298T	p.G100C	.	.	100	90	132	1	.	522
PTK7	5754	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	43109672	43109672	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PTK7	NM_001270398	exon12	c.T1796A	p.F599Y	.	.	88	27	49	0	.	1493
PTPLAD2	401494	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	21008034	21008034	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PTPLAD2	NM_001010915	exon6	c.T602C	p.M201T	.	.	98	43	98	0	.	91
PTPN13	5783	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	87732253	87732253	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PTPN13	NM_080685	exon47	c.C7369A	p.Q2457K	.	.	42	12	46	0	.	230
PTPRZ1	5803	bcgsc.ca	37	7	121691511	121691511	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PTPRZ1	NM_002851	exon24	c.T6114A	p.S2038R	.	.	379	155	428	4	.	699
PTPRZ1	5803	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	121653036	121653036	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PTPRZ1	NM_002851	exon12	c.T3936A	p.F1312L	.	.	146	57	157	0	.	699
PUS1	80324	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	132423731	132423731	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PUS1	NM_025215	exon4	c.C455A	p.A152D	.	.	88	42	100	0	.	577
PXDNL	137902	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	52320842	52320842	+	Silent	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PXDNL	NM_144651	exon17	c.C3342G	p.P1114P	.	.	193	73	145	0	.	70
PXDNL	137902	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	52321428	52321428	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PXDNL	NM_144651	exon17	c.T2756A	p.L919H	.	.	201	67	178	0	.	70
PYGM	5837	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	64527129	64527129	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	PYGM	NM_001164716	exon1	c.A242G	p.K81R	.	.	26	20	51	0	.	92
QPCT	25797	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	37599570	37599570	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	QPCT	NM_012413	exon6	c.T895A	p.Y299N	.	.	99	41	119	0	.	90
QSOX2	169714	bcgsc.ca	37	9	139108548	139108548	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	QSOX2	NM_181701	exon9	c.A1107T	p.P369P	.	.	63	27	77	3	.	91
RAB11FIP5	26056	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	73315575	73315575	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RAB11FIP5	NM_015470	exon3	c.A1171G	p.S391G	.	.	39	15	39	0	.	90
RAB3IL1	5866	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	61675695	61675695	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RAB3IL1	NM_001271686	exon2	c.A236G	p.H79R	.	.	19	14	47	0	.	228
RAI1	10743	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	17698925	17698925	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RAI1	NM_030665	exon3	c.A2663T	p.Q888L	.	.	66	33	80	0	.	91
RAP1GAP	5909	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	21940198	21940198	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RAP1GAP	NM_001145658	exon9	c.A589T	p.T197S	.	.	36	18	54	0	.	245
RAPGEF1	2889	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	134526250	134526250	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RAPGEF1	NM_198679	exon2	c.A151G	p.K51E	.	.	169	68	172	0	.	849
RARA	5914	broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	38512266	38512266	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RARA	NM_000964	exon9	c.G1177A	p.E393K	.	.	177	79	174	1	.	1083
RASA2	5922	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	141290358	141290358	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RASA2	NM_006506	exon11	c.T1131C	p.F377F	.	.	200	64	221	1	.	661
RASSF8	11228	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	26217535	26217535	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RASSF8	NM_007211	exon4	c.G208T	p.A70S	.	.	100	42	119	0	.	90
RBL1	5933	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	20	35632146	35632146	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RBL1	NM_183404	exon21	c.A2995T	p.R999X	.	.	228	97	213	0	.	419
RBL2	5934	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	53515713	53515713	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RBL2	NM_005611	exon21	c.A3215C	p.K1072T	.	.	111	57	121	0	.	841
RBM12	10137	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	34242510	34242510	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RBM12	NM_001198840	exon2	c.G735A	p.P245P	.	.	72	26	81	2	.	93
RCVRN	5957	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	9804355	9804355	+	Silent	SNP	C	C	T	rs144667256		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RCVRN	NM_002903	exon2	c.G444A	p.P148P	.	.	99	49	101	0	C|1.000;T|0.000	90
RDH8	50700	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	10129508	10129508	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RDH8	NM_015725	exon3	c.G424T	p.V142F	.	.	77	25	81	0	.	94
REREP3	646396	bcgsc.ca	37	15	22566923	22566923	+	RNA	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	104	8	141	0	.	.
RFPL2	10739	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	32586882	32586882	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RFPL2	NM_001098527	exon5	c.G1014A	p.E338E	.	.	264	116	250	0	.	91
RGS20	8601	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	54764467	54764467	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RGS20	NM_170587	exon1	c.A8T	p.Q3L	.	.	124	32	95	0	.	227
RIMS1	22999	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	72892030	72892030	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RIMS1	NM_014989	exon6	c.C856G	p.L286V	.	.	279	128	295	0	.	144
RIPK3	11035	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	14	24806550	24806550	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RIPK3	NM_006871	exon8	c.T1017A	p.S339S	.	.	28	13	52	0	.	946
RNF214	257160	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	11	117109396	117109396	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RNF214	NM_207343	exon3	c.A187T	p.R63X	.	.	137	58	150	0	.	90
RNF216	54476	broad.mit.edu;bcgsc.ca	37	7	5756357	5756357	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RNF216	NM_207111	exon10	c.A1685C	p.Q562P	.	.	89	6	127	0	.	274
RNF8	9025	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	37349083	37349083	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RNF8	NM_003958	exon7	c.G1394T	p.S465I	.	.	194	40	127	1	.	227
RNR2	6053	broad.mit.edu	37	MT	2332	2332	+	RNA	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	73	5	25	0	.	.
ROBO1	6091	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	78684981	78684981	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ROBO1	NM_002941	exon23	c.G3315T	p.Q1105H	.	.	326	95	275	0	.	67
ROBO1	6091	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	78711213	78711213	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ROBO1	NM_002941	exon15	c.T2018A	p.L673Q	.	.	291	86	232	0	.	67
ROBO2	6092	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	77629214	77629214	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ROBO2	NM_002942	exon16	c.A2445T	p.A815A	.	.	175	105	142	1	.	328
ROR1	4919	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	64515633	64515633	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ROR1	NM_001083592	exon3	c.T434C	p.V145A	.	.	75	26	97	0	.	1536
ROR2	4920	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	94486208	94486208	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ROR2	NM_004560	exon9	c.C2568A	p.V856V	.	.	39	16	73	0	.	1471
RP1	6101	broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	55533893	55533893	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RP1	NM_006269	exon2	c.C367T	p.R123C	.	.	142	89	75	1	.	102
RP1L1	94137	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	10465648	10465648	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RP1L1	NM_178857	exon4	c.A5960T	p.Q1987L	.	.	38	21	80	0	.	139
RPL27	6155	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	41150829	41150829	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RPL27	NM_000988	exon2	c.G62A	p.R21H	.	.	42	19	50	0	.	90
RTN4IP1	84816	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	107076839	107076839	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RTN4IP1	NM_032730	exon1	c.T58C	p.W20R	.	.	76	36	78	0	.	90
RUFY2	55680	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	70141014	70141014	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RUFY2	NM_017987	exon11	c.A1187T	p.N396I	.	.	116	37	81	0	.	91
RYR2	6262	bcgsc.ca	37	1	237765331	237765331	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RYR2	NM_001035	exon35	c.C4603A	p.P1535T	.	.	550	385	368	4	.	158
RYR2	6262	broad.mit.edu	37	1	237947958	237947958	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RYR2	NM_001035	exon90	c.G12946T	p.G4316X	.	.	191	123	102	2	.	158
RYR2	6262	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	237666678	237666678	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RYR2	NM_001035	exon22	c.A2486T	p.K829I	.	.	273	198	193	2	.	158
RYR2	6262	ucsc.edu;bcgsc.ca	37	1	237532841	237532841	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	RYR2	NM_001035	exon6	c.A317T	p.Q106L	.	.	208	144	141	3	.	158
SALL4	57167	broad.mit.edu	37	20	50408492	50408492	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SALL4	NM_020436	exon2	c.C530T	p.A177V	.	.	61	3	45	0	.	92
SAMD15	161394	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	77843998	77843998	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SAMD15	NM_001010860	exon1	c.T237A	p.P79P	.	.	127	53	129	0	.	90
SAMD9	54809	ucsc.edu;bcgsc.ca	37	7	92732405	92732405	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SAMD9	NM_001193307	exon2	c.G3006A	p.L1002L	.	.	140	54	136	2	.	140
SAR1A	56681	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	71917592	71917592	+	Silent	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SAR1A	NM_020150	exon5	c.A276C	p.A92A	.	.	127	43	92	0	.	227
SAT2	112483	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	7530941	7530941	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SAT2	NM_133491	exon1	c.C13A	p.R5R	.	.	89	31	101	0	.	90
SCN10A	6336	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	38766700	38766700	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SCN10A	NM_006514	exon17	c.T3193G	p.W1065G	.	.	60	45	140	1	.	99
SCN11A	11280	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	38926834	38926834	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SCN11A	NM_014139	exon17	c.T3009C	p.F1003F	.	.	118	102	144	1	.	99
SCN1A	6323	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	166897949	166897949	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SCN1A	NM_001165963	exon13	c.C2207T	p.P736L	.	.	73	30	72	0	.	147
SCNN1D	6339	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	1222886	1222886	+	Splice_Site	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SCNN1D	NM_001130413	exon10	c.1311-2A>T	.	.	.	71	24	114	0	.	90
SCYL3	57147	broad.mit.edu	37	1	169833526	169833526	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SCYL3	NM_020423	exon9	c.G939A	p.L313L	.	.	420	5	229	0	.	361
SEC23B	10483	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	18491619	18491619	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SEC23B	NM_032985	exon2	c.A140G	p.E47G	.	.	239	106	216	0	.	91
SEC24C	9632	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	75525661	75525661	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SEC24C	NM_004922	exon11	c.A1470T	p.V490V	.	.	108	34	123	0	.	92
SEMA4F	10505	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	74883712	74883712	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SEMA4F	NM_001271662	exon2	c.C197A	p.S66Y	.	.	119	52	148	0	.	93
SEMG1	6406	broad.mit.edu	37	20	43836938	43836938	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SEMG1	NM_003007	exon2	c.A1000T	p.S334C	.	.	299	7	384	0	.	92
SEPSECS	51091	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	25160667	25160667	+	Silent	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SEPSECS	NM_016955	exon2	c.A177C	p.A59A	.	.	265	154	199	0	.	90
SERPINE2	5270	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	224866418	224866418	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SERPINE2	NM_001136530	exon2	c.T236A	p.L79Q	.	.	63	27	63	0	.	290
SERPINI2	5276	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	167183368	167183368	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SERPINI2	NM_001012303	exon5	c.A602T	p.Q201L	.	.	102	43	106	0	.	228
SERTAD4	56256	ucsc.edu;bcgsc.ca;mdanderson.org	37	1	210414905	210414905	+	Silent	SNP	C	C	A	rs145855776	byfrequency;alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SERTAD4	NM_019605	exon4	c.C294A	p.T98T	.	.	223	35	138	3	C|0.999;T|0.001	92
SETD3	84193	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	99865385	99865385	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SETD3	NM_032233	exon13	c.A1416G	p.K472K	.	.	142	57	148	0	.	514
SEZ6L	23544	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	26702074	26702074	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SEZ6L	NM_021115	exon6	c.T1478C	p.L493P	.	.	90	32	75	1	.	95
SFTPA1	653509	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	81371581	81371581	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001093770	exon3	c.C45A	p.A15A	.	.	421	152	332	1	.	.
SHOC2	8036	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	112724768	112724768	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SHOC2	NM_007373	exon2	c.652delA	p.S218fs	.	.	133	42	102	0	.	524
SHROOM3	57619	broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	77675938	77675938	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SHROOM3	NM_020859	exon7	c.C4302T	p.A1434A	.	.	151	58	172	1	.	93
SIGLEC1	6614	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	3674934	3674934	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SIGLEC1	NM_023068	exon12	c.G3190A	p.V1064I	.	.	122	47	193	1	.	167
SIGLEC7	27036	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	51645871	51645871	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SIGLEC7	NM_016543	exon1	c.A245T	p.N82I	.	.	95	9	139	0	.	153
SIRT5	23408	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	13588600	13588600	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SIRT5	NM_012241	exon4	c.G153A	p.K51K	.	.	367	86	173	0	.	228
SLC16A9	220963	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	61443920	61443920	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC16A9	NM_194298	exon2	c.T130C	p.F44L	.	.	243	12	213	0	.	93
SLC1A6	6511	broad.mit.edu;ucsc.edu;mdanderson.org	37	19	15083653	15083653	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC1A6	NM_001272087	exon4	c.C70T	p.Q24X	.	.	107	48	106	1	.	186
SLC22A24	283238	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	62886696	62886696	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001136506	exon3	c.A618T	p.A206A	.	.	213	76	205	0	.	.
SLC22A4	6583	broad.mit.edu;bcgsc.ca	37	5	131647952	131647952	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC22A4	NM_003059	exon2	c.A492G	p.S164S	.	.	61	5	106	0	.	90
SLC23A2	9962	broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	4837746	4837746	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC23A2	NM_203327	exon17	c.A1825G	p.I609V	.	.	79	40	124	2	.	92
SLC25A51P1	442229	ucsc.edu;bcgsc.ca	37	6	66498415	66498415	+	RNA	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	52	24	55	1	.	.
SLC27A5	10998	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	59022230	59022230	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC27A5	NM_012254	exon2	c.C756T	p.L252L	.	.	52	25	55	0	.	90
SLC30A1	7779	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	211751602	211751602	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC30A1	NM_021194	exon1	c.G353T	p.G118V	.	.	205	43	105	0	.	93
SLC37A3	84255	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	140048534	140048534	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC37A3	NM_207113	exon10	c.A916G	p.N306D	.	.	90	44	120	0	.	93
SLC41A3	54946	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	3	125775394	125775416	+	Frame_Shift_Del	DEL	ATGGCCAGGCAATGCACCACGAT	ATGGCCAGGCAATGCACCACGAT	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	ATGGCCAGGCAATGCACCACGAT	ATGGCCAGGCAATGCACCACGAT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC41A3	NM_001008487	wholegene			.	.	88	14	140	0	.	90
SLC44A4	80736	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	6	31839119	31839119	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC44A4	NM_025257	exon9	c.T673G	p.F225V	.	.	168	7	117	0	.	156
SLC4A1	6521	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	42328926	42328926	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC4A1	NM_000342	exon18	c.C2342T	p.S781F	.	.	135	47	153	0	.	92
SLC4A8	9498	bcgsc.ca	37	12	51888775	51888775	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC4A8	NM_001039960	exon21	c.C2816G	p.P939R	.	.	171	68	193	5	.	95
SLC5A1	6523	broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	32495287	32495287	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC5A1	NM_000343	exon12	c.C1398A	p.P466P	.	.	74	30	129	1	.	91
SLC6A3	6531	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	1409895	1409895	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC6A3	NM_001044	exon10	c.C1339A	p.L447I	.	.	51	29	74	0	.	157
SLC6A4	6532	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	28534791	28534791	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC6A4	NM_001045	exon13	c.T1609A	p.W537R	.	.	117	43	205	0	.	94
SLC6A5	9152	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	20652295	20652295	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLC6A5	NM_004211	exon10	c.A1558C	p.I520L	.	.	134	52	151	0	.	156
SLC9C2	284525	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	173526479	173526479	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_178527	exon10	c.G1215T	p.M405I	.	.	445	95	262	0	.	.
SLFN13	146857	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	33767910	33767910	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLFN13	NM_144682	exon6	c.T2398A	p.F800I	.	.	114	52	92	0	.	91
SLIT2	9353	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	4	20255500	20255500	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLIT2	NM_004787	exon1	c.A62G	p.N21S	.	.	42	11	17	0	.	521
SLIT2	9353	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	4	20525440	20525440	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLIT2	NM_004787	exon13	c.C1188A	p.H396Q	.	.	251	15	208	0	.	521
SLITRK6	84189	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	86368800	86368800	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLITRK6	NM_032229	exon2	c.T1844G	p.L615R	.	.	173	69	194	0	.	137
SLMO1	10650	broad.mit.edu	37	18	12427085	12427085	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SLMO1	NM_001142405	exon4	c.A337T	p.T113S	.	.	180	7	166	0	.	90
SMG9	56006	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	44241827	44241827	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SMG9	NM_019108	exon9	c.A917T	p.Q306L	.	.	70	26	94	0	.	91
SMOX	54498	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	4155893	4155893	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SMOX	NM_175839	exon2	c.T191C	p.V64A	.	.	95	36	106	0	.	153
SOGA2	23255	broad.mit.edu;ucsc.edu;bcgsc.ca	37	18	8825710	8825710	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_015210	exon15	c.C4202A	p.P1401H	.	.	235	95	305	2	.	.
SOHLH1	402381	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	138589403	138589403	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SOHLH1	NM_001012415	exon4	c.A416T	p.Q139L	.	.	67	30	98	0	.	135
SORT1	6272	hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	109910100	109910100	+	Missense_Mutation	SNP	T	T	C	rs61797119	byfrequency	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SORT1	NM_002959	exon3	c.A370G	p.I124V	.	.	58	24	65	0	T|0.995;C|0.005	91
SOX12	6666	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	20	306791	306791	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SOX12	NM_006943	exon1	c.G223A	p.G75S	.	.	123	51	155	0	.	514
SPACA1	81833	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	88757710	88757710	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SPACA1	NM_030960	exon1	c.G87A	p.G29G	.	.	119	51	114	0	.	90
SPATA22	84690	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	3349813	3349813	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SPATA22	NM_032598	exon7	c.A755G	p.Y252C	.	.	409	155	423	0	.	90
SPATA31D5P	347127	broad.mit.edu	37	9	84533247	84533247	+	RNA	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	14	5	13	0	.	.
SPATA5L1	79029	hgsc.bcm.edu;broad.mit.edu;mdanderson.org	37	15	45694903	45694903	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SPATA5L1	NM_024063	exon1	c.G276C	p.R92S	.	.	14	8	10	0	.	94
SPOCK3	50859	broad.mit.edu;bcgsc.ca	37	4	168155255	168155255	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SPOCK3	NM_016950	exon2	c.G70T	p.A24S	.	.	109	42	129	1	.	136
SPTA1	6708	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	158632708	158632708	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SPTA1	NM_003126	exon17	c.G2248C	p.A750P	.	.	209	10	148	0	.	142
SPTBN1	6711	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	54882216	54882216	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SPTBN1	NM_003128	exon28	c.A5832G	p.S1944S	.	.	113	45	123	1	.	140
SPTBN4	57731	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	41071395	41071395	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SPTBN4	NM_020971	exon28	c.G5982A	p.R1994R	.	.	116	48	110	0	.	94
SRCAP	10847	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	30749727	30749727	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SRCAP	NM_006662	exon34	c.G8366A	p.G2789E	.	.	66	9	79	0	.	94
SRRM4	84530	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	119554788	119554788	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SRRM4	NM_194286	exon4	c.A412T	p.S138C	.	.	60	25	70	0	.	2
ST18	9705	broad.mit.edu	37	8	53076547	53076547	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ST18	NM_014682	exon13	c.A1399G	p.R467G	.	.	131	4	79	0	.	95
STAB1	23166	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	52554842	52554842	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	STAB1	NM_015136	exon55	c.G5729T	p.R1910L	.	.	42	32	54	0	.	139
STAB2	55576	ucsc.edu;bcgsc.ca	37	12	104025439	104025439	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	STAB2	NM_017564	exon6	c.A551G	p.Y184C	.	.	204	87	200	3	.	104
STEAP3	55240	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	120020691	120020691	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	STEAP3	NM_182915	exon6	c.G1274T	p.W425L	.	.	47	21	41	0	.	91
STK10	6793	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	171509351	171509351	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	STK10	NM_005990	exon12	c.G1968A	p.Q656Q	.	.	67	27	100	0	.	1022
STK31	56164	broad.mit.edu	37	7	23802521	23802521	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	STK31	NM_031414	exon11	c.T1395C	p.N465N	.	.	78	9	84	2	.	338
STK35	140901	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	2097911	2097911	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	STK35	NM_080836	exon3	c.A1492G	p.M498V	.	.	80	40	127	0	.	334
STMN2	11075	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	80553736	80553736	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	STMN2	NM_007029	exon3	c.C239T	p.S80F	.	.	300	20	266	0	.	515
STRC	161497	broad.mit.edu	37	15	43897534	43897534	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	STRC	NM_153700	exon19	c.A3858G	p.R1286R	.	.	492	13	531	0	.	90
SUCLG1	8802	ucsc.edu;bcgsc.ca	37	2	84668526	84668526	+	Missense_Mutation	SNP	C	C	A	rs146102400	byfrequency;alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SUCLG1	NM_003849	exon4	c.G376T	p.A126S	.	.	260	98	327	2	C|1.000;T|0.000	90
SUFU	51684	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	104268957	104268957	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SUFU	NM_001178133	exon2	c.A214T	p.S72C	.	.	130	89	150	0	.	2246
SUPT20HL1	100130302	hgsc.bcm.edu;ucsc.edu;bcgsc.ca	37	X	24383280	24383280	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001136234	exon1	c.G2403T	p.Q801H	.	.	77	66	121	1	.	.
SVEP1	79987	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	9	113341549	113341549	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SVEP1	NM_153366	exon1	c.C275T	p.S92F	.	.	51	21	60	0	.	75
SVEP1	79987	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	113168473	113168473	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SVEP1	NM_153366	exon38	c.A9407T	p.E3136V	.	.	153	62	145	0	.	75
SYK	6850	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	93650165	93650165	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SYK	NM_003177	exon12	c.A1716G	p.P572P	.	.	97	40	111	0	.	1402
SYNE1	23345	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	152765648	152765648	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SYNE1	NM_033071	exon30	c.C3756A	p.L1252L	.	.	60	33	101	0	.	607
SYNE2	23224	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	64519465	64519465	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SYNE2	NM_182914	exon48	c.G8834A	p.C2945Y	.	.	139	50	133	1	.	164
SYT2	127833	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	202571584	202571584	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SYT2	NM_177402	exon5	c.T555A	p.P185P	.	.	132	99	77	0	.	93
SYT3	84258	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	51128790	51128790	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	SYT3	NM_032298	exon6	c.G1434T	p.E478D	.	.	84	27	114	0	.	155
TAF1L	138474	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	32632432	32632432	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TAF1L	NM_153809	exon1	c.G3146C	p.R1049P	.	.	217	81	215	0	.	870
TANC1	85461	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	160087091	160087091	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TANC1	NM_033394	exon27	c.C5154A	p.P1718P	.	.	111	43	135	0	.	92
TARM1	441864	broad.mit.edu	37	19	54577220	54577220	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001135686	exon4	c.C610A	p.P204T	.	.	134	4	186	0	.	.
TBP	6908	hgsc.bcm.edu	37	6	170871013	170871013	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TBP	NM_003194	exon3	c.A189G	p.Q63Q	.	.	85	3	79	0	.	91
TCEB3CL2	100506888	bcgsc.ca;mdanderson.org	37	18	44543310	44543310	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001242907	exon1	c.C1062G	p.D354E	.	.	293	18	351	0	.	.
TCF4	6925	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	53303052	53303052	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TCF4	NM_001243226	exon1	c.A77T	p.Y26F	.	.	116	40	120	0	.	523
TCHH	7062	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	152081242	152081242	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TCHH	NM_007113	exon3	c.A4451G	p.D1484G	.	.	246	49	147	0	.	72
TCN1	6947	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	59623413	59623413	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TCN1	NM_001062	exon6	c.A866T	p.Q289L	.	.	264	66	205	1	.	92
TDRD9	122402	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	104460669	104460669	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TDRD9	NM_153046	exon10	c.G1181T	p.G394V	.	.	77	29	63	0	.	70
TEK	7010	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	27203079	27203079	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TEK	NM_000459	exon13	c.C2171A	p.A724D	.	.	134	56	185	0	.	1584
TENM3	55714	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	183659668	183659668	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001080477	exon17	c.A3350G	p.D1117G	.	.	86	41	88	0	.	.
TEX11	56159	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	69772028	69772028	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TEX11	NM_001003811	exon29	c.T2513A	p.L838Q	.	.	467	215	326	1	.	178
THOP1	7064	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	2810300	2810300	+	Splice_Site	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	THOP1	NM_003249	exon10	c.1456-2A>T	.	.	.	45	19	61	0	.	92
THRSP	7069	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	77775013	77775013	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	THRSP	NM_003251	exon1	c.A86G	p.Q29R	.	.	70	32	63	0	.	69
TIE1	7075	broad.mit.edu	37	1	43787098	43787098	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TIE1	NM_005424	exon21	c.C3180A	p.A1060A	.	.	108	5	125	2	.	1404
TIGD5	84948	broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	144681732	144681732	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TIGD5	NM_032862	exon1	c.G1659A	p.L553L	.	.	75	27	46	2	.	90
TLE2	7089	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	3019696	3019696	+	Splice_Site	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_003260	exon7	c.369+1G>T	.	.	.	110	40	156	3	.	.
TLR3	7098	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	186997908	186997908	+	Silent	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TLR3	NM_003265	exon2	c.A135C	p.V45V	.	.	105	41	135	0	.	524
TLX1NB	100038246	broad.mit.edu;mdanderson.org	37	10	102849344	102849344	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001085398	exon3	c.C319A	p.R107R	.	.	99	59	78	2	.	.
TM9SF4	9777	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	30738606	30738606	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TM9SF4	NM_014742	exon12	c.G1173T	p.V391V	.	.	110	50	133	0	.	514
TMC1	117531	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	9	75404071	75404071	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TMC1	NM_138691	exon15	c.A1062T	p.V354V	.	.	139	8	130	0	.	91
TMEM132B	114795	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	126138603	126138603	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TMEM132B	NM_052907	exon9	c.A2584G	p.K862E	.	.	91	44	132	0	.	185
TMEM151B	441151	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	44243711	44243711	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_001137560	exon3	c.T1148A	p.L383Q	.	.	59	18	36	0	.	.
TMEM179	388021	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	14	105070865	105070865	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TMEM179	NM_207379	exon1	c.C214T	p.R72C	.	.	43	19	63	0	.	514
TMEM198B	440104	broad.mit.edu	37	12	56227551	56227551	+	RNA	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	11	5	8	0	.	.
TMEM79	84283	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	156255759	156255759	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TMEM79	NM_032323	exon2	c.T742A	p.F248I	.	.	143	95	83	1	.	90
TMF1	7110	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	69097054	69097054	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TMF1	NM_007114	exon2	c.A802G	p.I268V	.	.	68	30	58	0	.	90
TMPRSS11A	339967	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	68780363	68780363	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TMPRSS11A	NM_182606	exon9	c.T1047C	p.D349D	.	.	235	30	251	0	.	69
TMPRSS11A	339967	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	68795630	68795630	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TMPRSS11A	NM_182606	exon5	c.T458C	p.L153S	.	.	165	79	213	0	.	69
TNN	63923	broad.mit.edu	37	1	175048522	175048522	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TNN	NM_022093	exon3	c.T463A	p.C155S	.	.	45	4	22	0	.	138
TNPO1	3842	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	72188978	72188978	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TNPO1	NM_002270	exon16	c.G1801T	p.V601F	.	.	104	45	80	0	.	228
TNPO1	3842	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	72201205	72201205	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TNPO1	NM_002270	exon24	c.A2665G	p.K889E	.	.	75	26	77	0	.	228
TNRC6B	23112	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	22	40708962	40708962	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TNRC6B	NM_001162501	exon19	c.G4639T	p.A1547S	.	.	106	39	110	0	.	22
TNS1	7145	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	218750502	218750502	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TNS1	NM_022648	exon13	c.A706G	p.I236V	.	.	74	29	72	0	.	156
TNS3	64759	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	47342734	47342734	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TNS3	NM_022748	exon22	c.A3271T	p.T1091S	.	.	100	11	112	0	.	94
TPBG	7162	broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	83074944	83074944	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TPBG	NM_001166392	exon2	c.T266A	p.L89Q	.	.	24	8	39	0	.	514
TPH2	121278	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	72425319	72425319	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TPH2	NM_173353	exon11	c.T1317C	p.I439I	.	.	141	60	156	0	.	93
TPRA1	131601	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	127298924	127298924	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TPRA1	NM_001142646	exon2	c.A66G	p.P22P	.	.	39	4	52	0	.	90
TRHR	7201	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	110100121	110100121	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TRHR	NM_003301	exon1	c.T380G	p.I127S	.	.	416	77	237	0	.	620
TRIM28	10155	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	59057222	59057222	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TRIM28	NM_005762	exon3	c.A545G	p.Q182R	.	.	123	48	124	1	.	870
TRIM51HP	440041	broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	55065414	55065414	+	RNA	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	83	28	73	0	.	.
TRIO	7204	ucsc.edu;bcgsc.ca	37	5	14336822	14336822	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TRIO	NM_007118	exon11	c.A2032G	p.T678A	.	.	387	145	455	3	.	562
TRPA1	8989	broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	72938310	72938310	+	Splice_Site	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TRPA1	NM_007332	exon26	c.2938-2A>T	.	.	.	111	58	69	1	.	230
TRPC6	7225	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	101375282	101375282	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TRPC6	NM_004621	exon2	c.G418T	p.A140S	.	.	97	40	120	0	.	93
TRPM2	7226	bcgsc.ca	37	21	45811258	45811258	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TRPM2	NM_003307	exon11	c.1544delC	p.T515fs	.	.	98	37	139	1	.	92
TSNAX	7257	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	231700443	231700443	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TSNAX	NM_005999	exon6	c.G665T	p.R222L	.	.	359	240	237	0	.	90
TSPAN18	90139	broad.mit.edu	37	11	44941470	44941470	+	Silent	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TSPAN18	NM_130783	exon7	c.A535C	p.R179R	.	.	98	4	141	0	.	68
TTC25	83538	broad.mit.edu;ucsc.edu;mdanderson.org	37	17	40117322	40117322	+	RNA	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TTC25	.	.	.	.	.	.	135	50	135	0	.	23
TTK	7272	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	80746315	80746315	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TTK	NM_003318	exon17	c.A2048G	p.Q683R	.	.	104	39	87	0	.	1299
TTN	7273	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	179544108	179544108	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TTN	NM_001267550	exon142	c.C33700A	p.P11234T	.	.	136	48	168	1	.	636
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	179431803	179431803	+	Silent	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TTN	NM_001267550	exon326	c.A79056G	p.L26352L	.	.	119	43	120	0	.	636
TTN	7273	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	179587117	179587117	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TTN	NM_001267550	exon77	c.A22397C	p.Q7466P	.	.	98	38	109	0	.	636
TUBB2B	347733	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	6	3227741	3227741	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TUBB2B	NM_178012	exon1	c.G37T	p.G13C	.	.	37	11	21	0	.	153
TXNDC12	51060	bcgsc.ca	37	1	52492992	52492992	+	Silent	SNP	C	C	G	rs199865786	alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TXNDC12	NM_015913	exon4	c.G240C	p.T80T	.	.	241	102	268	6	C|0.999;T|0.000	91
TYR	7299	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	88911129	88911129	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	TYR	NM_000372	exon1	c.T8A	p.L3Q	.	.	57	28	103	0	.	92
U2AF2	11338	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	56173908	56173908	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	U2AF2	NM_001012478	exon6	c.G527T	p.G176V	.	.	131	52	156	1	.	91
UBL4B	164153	broad.mit.edu;ucsc.edu;mdanderson.org	37	1	110655547	110655547	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	UBL4B	NM_203412	exon1	c.G391T	p.E131X	.	.	98	37	117	1	.	69
UBR4	23352	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	19433356	19433356	+	Silent	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	UBR4	NM_020765	exon82	c.C12210T	p.A4070A	.	.	184	83	255	0	.	612
ULK1	8408	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	12	132393332	132393332	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ULK1	NM_003565	exon6	c.G460T	p.A154S	.	.	37	19	44	0	.	758
UMODL1	89766	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	43496123	43496123	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	UMODL1	NM_173568	exon2	c.T86A	p.L29H	.	.	92	34	131	0	.	93
UNC5B	219699	ucsc.edu;bcgsc.ca;mdanderson.org	37	10	73051388	73051388	+	Silent	SNP	T	T	C	rs3740460	byfrequency	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	UNC5B	NM_170744	exon10	c.T1494C	p.D498D	.	.	90	52	83	1	T|0.845;C|0.155	228
UNC79	57578	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	94046694	94046694	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_020818	exon19	c.T2102A	p.L701Q	.	.	104	53	102	0	.	.
UNC80	285175	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	210805966	210805966	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	UNC80	NM_032504	exon43	c.T6470C	p.L2157P	.	.	112	52	135	0	.	90
USP7	7874	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	8988707	8988707	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	USP7	NM_003470	exon29	c.G3045T	p.E1015D	.	.	88	33	104	0	.	661
UTP14A	10813	bcgsc.ca	37	X	129055406	129055406	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	UTP14A	NM_006649	exon11	c.A1191T	p.P397P	.	.	280	129	238	5	.	132
UTP15	84135	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	72868323	72868323	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	UTP15	NM_032175	exon7	c.A683G	p.Y228C	.	.	143	56	173	0	.	90
VBP1	7411	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	X	154444801	154444801	+	Silent	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	VBP1	NM_003372	exon1	c.C42G	p.A14A	.	.	130	72	69	0	.	226
VEPH1	79674	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	157031464	157031464	+	Silent	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	VEPH1	NM_001167912	exon11	c.G1956T	p.G652G	.	.	91	33	103	0	.	155
VRTN	55237	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	74825421	74825421	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	VRTN	NM_018228	exon2	c.G1935T	p.M645I	.	.	126	48	125	0	.	155
VWA3B	200403	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	98797635	98797635	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	VWA3B	NM_144992	exon9	c.T1271C	p.I424T	.	.	125	48	196	0	.	139
VWA7	80737	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	31735467	31735467	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_025258	exon11	c.G1568T	p.G523V	.	.	190	42	108	0	.	.
WDFY4	57705	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	10	49982657	49982657	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	WDFY4	NM_020945	exon14	c.C2708A	p.S903X	.	.	137	43	87	0	.	22
WDR43	23160	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	29169340	29169340	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	WDR43	NM_015131	exon17	c.A1829T	p.D610V	.	.	126	44	120	0	.	69
WDR47	22911	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	109525342	109525342	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	WDR47	NM_001142550	exon12	c.G2179A	p.G727S	.	.	138	61	133	0	.	91
WDR66	144406	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	122413230	122413230	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	WDR66	NM_144668	exon18	c.A2852G	p.K951R	.	.	156	55	200	0	.	92
WDR70	55100	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	37721261	37721261	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	WDR70	NM_018034	exon14	c.G1461A	p.M487I	.	.	153	63	176	0	.	187
WDR87	83889	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	38377306	38377306	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_031951	exon6	c.G6888A	p.K2296K	.	.	210	93	224	1	.	.
WDR93	56964	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	15	90272996	90272996	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	WDR93	NM_020212	exon11	c.A1206G	p.K402K	.	.	93	5	135	0	.	24
WFDC3	140686	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	44405762	44405762	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	WFDC3	NM_080614	exon5	c.T445A	p.C149S	.	.	151	62	190	0	.	90
WFDC3	140686	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	44418554	44418554	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	WFDC3	NM_080614	exon2	c.T61A	p.W21R	.	.	66	20	115	0	.	90
WNT4	54361	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	22446623	22446623	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	WNT4	NM_030761	exon5	c.T976C	p.C326R	.	.	33	15	57	0	.	524
XIRP2	129446	ucsc.edu;bcgsc.ca	37	2	168106056	168106056	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	XIRP2	NM_152381	exon9	c.A8154G	p.L2718L	.	.	271	102	347	3	.	104
XPO6	23214	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	16	28137133	28137141	+	In_Frame_Del	DEL	CGGCAGTCG	CGGCAGTCG	-	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	CGGCAGTCG	CGGCAGTCG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	XPO6	NM_015171	exon13	c.1635_1643del	p.545_548del	.	.	51	17	71	0	.	227
XRN1	54464	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	142145680	142145680	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	XRN1	NM_001042604	exon3	c.A312T	p.S104S	.	.	68	40	94	0	.	93
YIF1B	90522	broad.mit.edu;bcgsc.ca	37	19	38798334	38798334	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	YIF1B	NM_001039672	exon6	c.G598A	p.E200K	.	.	63	27	97	2	.	68
ZBED2	79413	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	111312691	111312691	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZBED2	NM_024508	exon2	c.C358A	p.Q120K	.	.	67	30	70	0	.	91
ZBTB37	84614	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	173842760	173842760	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZBTB37	NM_032522	exon4	c.A1079T	p.Y360F	.	.	234	38	130	0	.	90
ZBTB39	9880	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	57397645	57397645	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZBTB39	NM_014830	exon2	c.G1057C	p.E353Q	.	.	117	48	128	0	.	135
ZCCHC6	79670	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	88961390	88961390	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZCCHC6	NM_024617	exon3	c.A526G	p.K176E	.	.	90	28	118	0	.	92
ZDHHC13	54503	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	19170823	19170823	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZDHHC13	NM_019028	exon5	c.T464A	p.L155Q	.	.	124	55	133	1	.	90
ZDHHC13	54503	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	19170802	19170802	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZDHHC13	NM_019028	exon5	c.A443C	p.E148A	.	.	134	51	135	0	.	90
ZFP36L1	677	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	69256435	69256435	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZFP36L1	NM_001244701	exon3	c.C1039A	p.L347I	.	.	63	34	96	0	.	91
ZFPM2	23414	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	106813578	106813578	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	ZFPM2,NS,carcinoma,-1	ZFPM2	NM_012082	exon8	c.G1268A	p.S423N	.	.	299	134	149	0	.	139
ZFYVE16	9765	bcgsc.ca	37	5	79747529	79747529	+	Splice_Site	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZFYVE16	NM_001105251	exon11	c.3607+1G>T	.	.	.	85	5	81	0	.	90
ZFYVE9	9372	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	52761649	52761649	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZFYVE9	NM_004799	exon12	c.A3333G	p.A1111A	.	.	102	43	115	0	.	230
ZGPAT	84619	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	62366141	62366141	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZGPAT	NM_032527	exon5	c.G1016T	p.R339I	.	.	94	35	88	0	.	90
ZIM3	114026	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	19	57646378	57646378	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZIM3	NM_052882	exon5	c.G1327T	p.G443X	.	.	127	50	143	0	.	92
ZMYND15	84225	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	17	4649179	4649179	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZMYND15	NM_001267822	exon14	c.C2147A	p.A716E	.	.	245	129	315	0	.	90
ZNF143	7702	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	9499989	9499989	+	Silent	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF143	NM_003442	exon6	c.A426T	p.T142T	.	.	75	22	98	0	.	90
ZNF252P	286101	broad.mit.edu	37	8	146203004	146203004	+	RNA	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	54	24	17	0	.	.
ZNF256	10172	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	58452722	58452722	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF256	NM_005773	exon3	c.A1454G	p.H485R	.	.	56	21	60	0	.	92
ZNF264	9422	broad.mit.edu	37	19	57724334	57724334	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF264	NM_003417	exon4	c.A1869T	p.Q623H	.	.	96	5	93	0	.	92
ZNF285	26974	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	44892183	44892183	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF285	NM_152354	exon4	c.A224C	p.Q75P	.	.	175	67	197	0	.	94
ZNF287	57336	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	16470686	16470686	+	Silent	SNP	T	T	C	rs201476319	alternate_allele	TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF287	NM_020653	exon2	c.A360G	p.A120A	.	.	85	35	98	1	T|0.999;G|0.001	90
ZNF28	7576	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	53303548	53303548	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF28	NM_006969	exon4	c.A1550G	p.H517R	.	.	65	21	104	0	.	91
ZNF311	282890	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	28962885	28962885	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF311	NM_001010877	exon7	c.A1894G	p.R632G	.	.	208	38	130	0	.	22
ZNF330	27309	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	142145639	142145639	+	Splice_Site	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF330	NM_014487	exon3	c.121-2A>T	.	.	.	354	156	349	0	.	90
ZNF334	55713	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	45130946	45130946	+	Silent	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF334	NM_018102	exon5	c.A1032T	p.T344T	.	.	97	40	107	0	.	92
ZNF436	80818	hgsc.bcm.edu	37	1	23689069	23689069	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF436	NM_001077195	exon4	c.A806G	p.Q269R	.	.	114	5	140	0	.	153
ZNF451	26036	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	57011970	57011970	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF451	NM_001031623	exon10	c.T1087A	p.Y363N	.	.	345	65	169	1	.	93
ZNF451	26036	ucsc.edu;bcgsc.ca	37	6	57011971	57011971	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF451	NM_001031623	exon10	c.A1088T	p.Y363F	.	.	345	64	170	2	.	93
ZNF473	25888	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	50549039	50549039	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF473	NM_015428	exon5	c.A1339G	p.N447D	.	.	104	45	106	1	.	91
ZNF483	158399	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	9	114289679	114289679	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF483	NM_133464	exon2	c.C4A	p.Q2K	.	.	117	9	104	0	.	91
ZNF496	84838	broad.mit.edu;ucsc.edu	37	1	247492170	247492170	+	Splice_Site	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF496	NM_032752	exon5	c.391-2A>G	.	.	.	68	13	75	2	.	91
ZNF521	25925	broad.mit.edu;ucsc.edu;bcgsc.ca	37	18	22805628	22805628	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF521	NM_015461	exon4	c.T2254A	p.Y752N	.	.	82	36	78	1	.	275
ZNF529	57711	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	37047079	37047079	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF529	NM_001145649	exon4	c.A35G	p.H12R	.	.	297	123	264	3	.	67
ZNF676	163223	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	22375842	22375842	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF676	NM_001001411	exon2	c.C106A	p.H36N	.	.	63	14	107	1	.	90
ZNF678	339500	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	227834348	227834348	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF678	NM_178549	exon3	c.A227G	p.N76S	.	.	100	69	60	1	.	91
ZNF683	257101	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	26694278	26694278	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	NM_173574	exon3	c.C125G	p.A42G	.	.	75	36	107	0	.	.
ZNF687	57592	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	151262629	151262630	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF687	NM_020832	exon7	c.2996_2997insG	p.E999fs	.	.	164	30	114	0	.	92
ZNF702P	79986	ucsc.edu;bcgsc.ca	37	19	53473169	53473169	+	RNA	SNP	T	T	A	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	310	137	346	3	.	.
ZNF707	286075	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	8	144776308	144776308	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF707	NM_001100598	exon6	c.A724G	p.S242G	.	.	89	10	49	0	.	67
ZNF708	7562	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	19	21477081	21477081	+	Nonsense_Mutation	SNP	A	A	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF708	NM_021269	exon4	c.T687A	p.C229X	.	.	32	15	27	0	.	516
ZNF724P	440519	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	23415022	23415022	+	RNA	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF724P	.	.	.	.	.	.	64	28	96	1	.	23
ZNF76	7629	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	35260758	35260758	+	Silent	SNP	G	G	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF76	NM_003427	exon11	c.G1266T	p.A422A	.	.	239	58	160	0	.	90
ZNF786	136051	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	148767562	148767562	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNF786	NM_152411	exon4	c.A2302G	p.K768E	.	.	138	58	111	0	.	50
ZNRF4	148066	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	5455751	5455751	+	Silent	SNP	C	C	T	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZNRF4	NM_181710	exon1	c.C249T	p.V83V	.	.	25	11	31	0	.	135
ZSCAN23	222696	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	28402633	28402633	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZSCAN23	NM_001012455	exon4	c.A779G	p.Q260R	.	.	275	66	148	0	.	68
ZZEF1	23140	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	3937451	3937451	+	Silent	SNP	A	A	G	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	ZZEF1	NM_015113	exon40	c.T6442C	p.L2148L	.	.	202	78	199	0	.	93
AC010240.3	0	bcgsc.ca	37	5	132323674	132323675	+	RNA	DNP	CG	CG	AT	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	CG	CG	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	.	.	.	.	.	
RP1-15D7.1	0	bcgsc.ca	37	6	27620427	27620428	+	RNA	DNP	AG	AG	GA	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	AG	AG	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	.	.	.	.	.	.	.	.	
ZNF479	90827	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	7	57188114	57188115	+	Missense_Mutation	DNP	CC	CC	AA	novel		TCGA-CC-A7IH-01A-11D-A33K-10	TCGA-CC-A7IH-10A-01D-A33K-10	CC	CC	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	6d3ad3bc-b5be-4233-a04b-909afa0302cf	aa24c0b3-7197-431d-b840-98fb061c54f6	.	.	.	.	.	p.W336F	.	.	.	.	.	.	.	
