Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	TranscriptID	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov_SOL	TVarCov_SOL	NTotCov_SOL	NVarCov_SOL	dbSNPPopFreq	COSMIC_Gene_Freq
AADAT	51166	bcgsc.ca	37	4	170991770	170991770	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AADAT	NM_182662	exon7	c.G688T	p.D230Y	.	.	63	4	104	0	.	90
AARS2	57505	bcgsc.ca	37	6	44274241	44274241	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AARS2	NM_020745	exon8	c.A1178G	p.N393S	.	.	181	6	218	0	.	91
AASS	10157	bcgsc.ca	37	7	121718010	121718010	+	Silent	SNP	A	A	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AASS	NM_005763	exon23	c.T2544A	p.S848S	.	.	74	4	118	0	.	92
AASS	10157	bcgsc.ca	37	7	121731794	121731794	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AASS	NM_005763	exon18	c.A1979G	p.N660S	.	.	154	5	237	1	.	92
ABCA13	154664	bcgsc.ca	37	7	48407410	48407410	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ABCA13	NM_152701	exon32	c.T10708C	p.F3570L	.	.	151	5	228	1	.	521
ABCA13	154664	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	48467402	48467402	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ABCA13	NM_152701	exon42	c.C12499T	p.H4167Y	.	.	106	52	151	0	.	521
ABCA5	23461	bcgsc.ca	37	17	67309270	67309270	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ABCA5	NM_018672	exon2	c.C270T	p.S90S	.	.	108	5	97	0	.	93
ABCA7	10347	broad.mit.edu	37	19	1051463	1051463	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ABCA7	NM_019112	exon21	c.A2840G	p.K947R	.	.	85	5	129	0	.	98
ABCA8	10351	bcgsc.ca	37	17	66887674	66887674	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ABCA8	NM_007168	exon22	c.A2980G	p.S994G	.	.	49	4	55	0	.	93
ABCB1	5243	bcgsc.ca	37	7	87175322	87175322	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ABCB1	NM_000927	exon16	c.A1744G	p.T582A	.	.	83	4	117	0	.	582
ABCB1	5243	bcgsc.ca	37	7	87183249	87183249	+	Splice_Site	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ABCB1	NM_000927	exon11	c.828-1G>A	.	.	.	84	4	123	0	.	582
ABCC11	85320	bcgsc.ca	37	16	48209279	48209279	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ABCC11	NM_033151	exon25	c.A3588G	p.A1196A	.	.	60	4	80	0	.	95
ABCC2	1244	bcgsc.ca	37	10	101590115	101590115	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ABCC2	NM_000392	exon20	c.T2672C	p.V891A	.	.	49	4	123	0	.	91
ABHD2	11057	bcgsc.ca	37	15	89698597	89698597	+	Splice_Site	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ABHD2	NM_152924	exon5	c.371-1G>T	.	.	.	71	4	79	0	.	227
ABI3BP	25890	bcgsc.ca	37	3	100585779	100585779	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ABI3BP	NM_015429	exon10	c.T953C	p.L318S	.	.	201	6	198	0	.	138
ACAA2	10449	bcgsc.ca	37	18	47322216	47322216	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ACAA2	NM_006111	exon4	c.T348C	p.C116C	.	.	145	5	199	0	.	91
ACAN	176	bcgsc.ca	37	15	89401191	89401191	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ACAN	NM_001135	exon12	c.T5375C	p.V1792A	.	.	80	4	117	0	.	25
ACD	65057	bcgsc.ca	37	16	67691730	67691730	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ACD	NM_001082486	exon11	c.T1491C	p.G497G	.	.	76	4	101	0	.	228
ACLY	47	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	40024989	40024989	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ACLY	NM_001096	exon28	c.G3184A	p.V1062M	.	.	48	19	76	0	.	228
ACN9	57001	bcgsc.ca	37	7	96747193	96747193	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ACN9	NM_020186	exon1	c.T158C	p.F53S	.	.	55	4	91	0	.	90
ACOX2	8309	bcgsc.ca	37	3	58519854	58519854	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ACOX2	NM_003500	exon4	c.G342A	p.V114V	.	.	87	4	105	1	.	90
ACTC1	70	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	35085586	35085586	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ACTC1	NM_005159	exon3	c.C314T	p.T105I	.	.	88	62	155	0	.	92
ACTN2	88	ucsc.edu;bcgsc.ca	37	1	236906333	236906333	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ACTN2	NM_001103	exon11	c.T1245C	p.T415T	.	.	40	4	59	0	.	95
ADAD1	132612	bcgsc.ca	37	4	123342520	123342520	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ADAD1	NM_139243	exon12	c.A1592G	p.E531G	.	.	76	4	77	0	.	90
ADAM20	8748	bcgsc.ca	37	14	70989740	70989740	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ADAM20	NM_003814	exon2	c.T1885C	p.S629P	.	.	74	4	143	0	.	226
ADAM9	8754	bcgsc.ca	37	8	38940488	38940488	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ADAM9	NM_003816	exon18	c.T1964C	p.V655A	.	.	56	4	189	0	.	227
ADD2	119	bcgsc.ca	37	2	70905892	70905892	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ADD2	NM_001185055	exon10	c.G1375A	p.V459I	.	.	66	4	98	0	.	93
ADGB	79747	bcgsc.ca	37	6	147045344	147045344	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_024694	exon18	c.C2118T	p.P706P	.	.	76	4	120	0	.	.
ADNP	23394	bcgsc.ca	37	20	49510105	49510105	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ADNP	NM_015339	exon5	c.A1146G	p.S382S	.	.	61	4	58	0	.	92
AFF4	27125	bcgsc.ca	37	5	132270384	132270384	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AFF4	NM_014423	exon3	c.T373C	p.S125P	.	.	142	5	188	0	.	229
AFP	174	hgsc.bcm.edu	37	4	74319616	74319616	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AFP	NM_001134	exon13	c.1785+2T>C	.	.	.	122	9	184	0	.	91
AGXT2L1	64850	bcgsc.ca	37	4	109667959	109667959	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AGXT2L1	NM_031279	exon10	c.A1131G	p.K377K	.	.	89	4	154	0	.	91
AHCYL2	23382	bcgsc.ca	37	7	129029042	129029042	+	Splice_Site	SNP	T	T	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AHCYL2	NM_001130720	exon3	c.616+2T>A	.	.	.	106	5	122	0	.	70
AHNAK	79026	bcgsc.ca	37	11	62288656	62288656	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AHNAK	NM_001620	exon5	c.A13233G	p.E4411E	.	.	106	6	179	2	.	109
AHNAK	79026	bcgsc.ca	37	11	62291050	62291050	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AHNAK	NM_001620	exon5	c.T10839C	p.P3613P	.	.	142	5	207	0	.	109
AHRR	57491	bcgsc.ca	37	5	353953	353953	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AHRR	NM_001242412	exon3	c.C183A	p.I61I	.	.	77	4	97	0	.	225
AIPL1	23746	bcgsc.ca	37	17	6337333	6337333	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AIPL1	NM_014336	exon2	c.T182C	p.I61T	.	.	92	4	165	0	.	90
AK7	122481	ucsc.edu	37	14	96864543	96864543	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AK7	NM_152327	exon2	c.G237A	p.V79V	.	.	36	4	58	0	.	228
AK8	158067	bcgsc.ca	37	9	135601167	135601167	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AK8	NM_152572	exon13	c.G1348A	p.A450T	.	.	54	4	80	0	.	90
AKAP9	10142	bcgsc.ca	37	7	91722534	91722534	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AKAP9	NM_005751	exon39	c.T9482C	p.V3161A	.	.	56	4	62	0	.	755
AKR1A1	10327	bcgsc.ca	37	1	46033832	46033832	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AKR1A1	NM_001202413	exon6	c.C535T	p.R179C	.	.	76	4	96	0	.	226
AKTIP	64400	bcgsc.ca	37	16	53528104	53528104	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AKTIP	NM_022476	exon8	c.T656C	p.V219A	.	.	62	4	88	0	.	90
ALAS2	212	bcgsc.ca	37	X	55042133	55042133	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ALAS2	NM_000032	exon8	c.A1046G	p.Q349R	.	.	85	4	109	0	.	131
ALDH9A1	223	bcgsc.ca	37	1	165652340	165652340	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ALDH9A1	NM_000696	exon3	c.A335G	p.E112G	.	.	87	4	66	0	.	226
ALG13	79868	bcgsc.ca	37	X	111003051	111003051	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ALG13	NM_001099922	exon27	c.C3238T	p.P1080S	.	.	127	6	159	0	.	130
ALKBH3	221120	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	43923153	43923153	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ALKBH3	NM_139178	exon8	c.A547T	p.N183Y	.	.	65	26	104	0	.	90
ALKBH4	54784	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	102100057	102100057	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ALKBH4	NM_017621	exon2	c.G315T	p.R105S	.	.	29	12	56	0	.	90
ALLC	55821	bcgsc.ca	37	2	3726062	3726062	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ALLC	NM_018436	exon4	c.A89G	p.D30G	.	.	90	4	81	0	.	23
ALOX5	240	bcgsc.ca	37	10	45877944	45877944	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ALOX5	NM_001256153	exon2	c.A164G	p.D55G	.	.	84	6	104	0	.	228
ALOX5	240	bcgsc.ca	37	10	45935960	45935960	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ALOX5	NM_001256153	exon8	c.T1064C	p.V355A	.	.	71	4	104	0	.	228
AMBN	258	bcgsc.ca	37	4	71469638	71469638	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AMBN	NM_016519	exon12	c.A798G	p.A266A	.	.	67	4	79	0	.	94
AMH	268	bcgsc.ca	37	19	2251776	2251776	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AMH	NM_000479	exon5	c.G1503T	p.P501P	.	.	31	4	28	0	.	130
AMHR2	269	bcgsc.ca	37	12	53819565	53819565	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AMHR2	NM_020547	exon6	c.T714C	p.A238A	.	.	45	4	55	0	.	628
AMPD1	270	ucsc.edu;bcgsc.ca	37	1	115218550	115218550	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AMPD1	NM_000036	exon11	c.A1562G	p.E521G	.	.	28	4	42	0	.	293
AMPH	273	bcgsc.ca	37	7	38466575	38466575	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AMPH	NM_139316	exon15	c.T1194C	p.G398G	.	.	95	4	130	0	.	95
ANAPC10	10393	bcgsc.ca	37	4	145916537	145916537	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANAPC10	NM_001256709	exon7	c.T579C	p.R193R	.	.	140	5	231	0	.	650
ANAPC2	29882	ucsc.edu	37	9	140080742	140080742	+	Silent	SNP	G	G	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANAPC2	NM_013366	exon3	c.C807G	p.T269T	.	.	42	4	56	0	.	227
ANK2	287	bcgsc.ca	37	4	114282033	114282033	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANK2	NM_001148	exon39	c.A10736G	p.H3579R	.	.	87	4	131	1	.	583
ANK3	288	bcgsc.ca	37	10	61831123	61831123	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANK3	NM_020987	exon37	c.C9516T	p.P3172P	.	.	146	5	275	0	.	107
ANKDD1A	348094	bcgsc.ca	37	15	65219179	65219179	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANKDD1A	NM_182703	exon6	c.A551G	p.D184G	.	.	67	4	121	0	.	69
ANKRD12	23253	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	18	9255525	9255525	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANKRD12	NM_015208	exon9	c.A2260T	p.I754F	.	.	24	11	64	0	.	92
ANKRD16	54522	bcgsc.ca	37	10	5925998	5925998	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANKRD16	NM_001009943	exon4	c.C621T	p.T207T	.	.	26	3	60	0	.	90
ANKRD34A	284615	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	1	145474731	145474731	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANKRD34A	NM_001039888	exon4	c.T1403A	p.L468X	.	.	43	16	27	0	.	68
ANKRD52	283373	ucsc.edu;bcgsc.ca	37	12	56648360	56648360	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANKRD52	NM_173595	exon8	c.693+2T>C	.	.	.	45	5	61	0	.	70
ANKRD53	79998	bcgsc.ca	37	2	71209216	71209216	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANKRD53	NM_001115116	exon4	c.C768T	p.H256H	.	.	52	4	80	0	.	90
ANXA10	11199	bcgsc.ca	37	4	169060657	169060657	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANXA10	NM_007193	exon3	c.A121G	p.I41V	.	.	68	4	81	0	.	90
ANXA10	11199	bcgsc.ca	37	4	169086396	169086396	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANXA10	NM_007193	exon6	c.401-2A>G	.	.	.	113	6	145	0	.	90
ANXA9	8416	bcgsc.ca	37	1	150956467	150956467	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ANXA9	NM_003568	exon5	c.C189T	p.A63A	.	.	60	4	79	0	.	90
AP3M2	10947	bcgsc.ca	37	8	42019799	42019799	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AP3M2	NM_001134296	exon5	c.G446A	p.G149E	.	.	20	3	46	0	.	90
AP4E1	23431	bcgsc.ca	37	15	51216188	51216188	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AP4E1	NM_007347	exon4	c.A407G	p.N136S	.	.	107	5	177	0	.	90
AP4M1	9179	bcgsc.ca	37	7	99702668	99702668	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AP4M1	NM_004722	exon9	c.A674G	p.E225G	.	.	85	4	120	0	.	90
APOM	55937	bcgsc.ca	37	6	31623809	31623809	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	APOM	NM_019101	exon1	c.G66A	p.Q22Q	.	.	142	5	129	0	.	90
APPL1	26060	bcgsc.ca	37	3	57291298	57291298	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	APPL1	NM_012096	exon15	c.A1272G	p.R424R	.	.	194	6	181	0	.	153
AQR	9716	bcgsc.ca	37	15	35222460	35222460	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AQR	NM_014691	exon12	c.A1013G	p.Q338R	.	.	34	2	53	0	.	135
ARAF	369	bcgsc.ca	37	X	47424717	47424717	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ARAF	NM_001256196	exon6	c.C534T	p.P178P	.	.	33	4	57	0	.	1557
ARG2	384	bcgsc.ca	37	14	68113682	68113682	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ARG2	NM_001172	exon6	c.A662G	p.D221G	.	.	17	3	47	0	.	90
ARHGAP12	94134	bcgsc.ca	37	10	32197252	32197252	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ARHGAP12	NM_001270698	exon3	c.G532A	p.G178S	.	.	98	5	162	1	.	227
ARHGAP15	55843	bcgsc.ca	37	2	144461070	144461070	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ARHGAP15	NM_018460	exon13	c.A1221G	p.K407K	.	.	93	4	79	0	.	653
ARHGAP24	83478	bcgsc.ca	37	4	86896085	86896085	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ARHGAP24	NM_001025616	exon7	c.A777G	p.V259V	.	.	47	4	79	0	.	227
ARHGAP31	57514	bcgsc.ca	37	3	119121100	119121100	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ARHGAP31	NM_020754	exon10	c.G1501T	p.V501F	.	.	55	4	71	0	.	92
ARHGAP31	57514	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	119087231	119087231	+	Silent	SNP	C	C	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ARHGAP31	NM_020754	exon3	c.C216G	p.G72G	.	.	86	57	86	0	.	92
ARHGAP35	2909	bcgsc.ca	37	19	47421973	47421973	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_004491	exon1	c.A41G	p.Y14C	.	.	153	6	201	0	.	.
ARHGEF19	128272	bcgsc.ca	37	1	16525645	16525645	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ARHGEF19	NM_153213	exon15	c.G2251C	p.G751R	.	.	80	5	162	0	.	229
ARHGEF26	26084	bcgsc.ca	37	3	153840593	153840593	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ARHGEF26	NM_001251962	exon2	c.C812T	p.P271L	.	.	40	4	56	0	.	47
ARHGEF28	64283	bcgsc.ca	37	5	73197023	73197023	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001080479	exon31	c.G3988A	p.G1330R	.	.	96	4	112	0	.	.
ARHGEF7	8874	bcgsc.ca	37	13	111932910	111932910	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ARHGEF7	NM_001113511	exon16	c.G1674A	p.V558V	.	.	75	4	104	0	.	232
ARMC3	219681	ucsc.edu;bcgsc.ca	37	10	23326201	23326201	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ARMC3	NM_173081	exon19	c.T2412C	p.A804A	.	.	51	5	108	0	.	90
ARPP21	10777	bcgsc.ca	37	3	35763176	35763176	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ARPP21	NM_016300	exon14	c.C1075A	p.Q359K	.	.	58	4	87	0	.	93
ASGR2	433	bcgsc.ca	37	17	7017521	7017521	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ASGR2	NM_080912	exon2	c.G39A	p.S13S	.	.	64	5	152	0	.	91
ASNS	440	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	97481701	97481701	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ASNS	NM_133436	exon13	c.G1556A	p.R519H	.	.	125	50	135	0	.	91
ASPHD1	253982	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	29912566	29912566	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ASPHD1	NM_181718	exon1	c.C274T	p.L92F	.	.	110	22	92	0	.	68
ATAD5	79915	bcgsc.ca	37	17	29220372	29220372	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ATAD5	NM_024857	exon21	c.A4501G	p.M1501V	.	.	87	4	124	0	.	93
ATG2B	55102	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	96795907	96795907	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ATG2B	NM_018036	exon12	c.A1795C	p.S599R	.	.	85	50	166	0	.	93
ATP1A1	476	bcgsc.ca	37	1	116941584	116941584	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ATP1A1	NM_001160233	exon17	c.A2326G	p.I776V	.	.	73	4	148	1	.	91
ATP6V0A2	23545	ucsc.edu;bcgsc.ca	37	12	124220107	124220107	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ATP6V0A2	NM_012463	exon8	c.A761G	p.N254S	.	.	57	5	61	0	.	92
ATP8A1	10396	bcgsc.ca	37	4	42416692	42416692	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ATP8A1	NM_006095	exon36	c.A3349G	p.N1117D	.	.	63	4	86	0	.	92
ATP8A1	10396	bcgsc.ca	37	4	42592839	42592839	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ATP8A1	NM_006095	exon7	c.T513C	p.S171S	.	.	57	5	104	0	.	92
ATP8A2	51761	bcgsc.ca	37	13	26542743	26542743	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ATP8A2	NM_016529	exon35	c.G3303A	p.L1101L	.	.	68	4	135	0	.	138
ATP8B2	57198	bcgsc.ca	37	1	154315987	154315987	+	Silent	SNP	G	G	A	rs71628607	byfrequency	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ATP8B2	NM_020452	exon17	c.G1800A	p.L600L	.	.	99	5	106	1	G|0.996;A|0.004	92
ATR	545	bcgsc.ca	37	3	142281135	142281135	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ATR	NM_001184	exon4	c.T1109C	p.V370A	.	.	131	6	147	0	.	1139
ATRX	546	bcgsc.ca	37	X	76875918	76875918	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ATRX	NM_000489	exon20	c.A5217G	p.R1739R	.	.	89	4	184	0	.	248
ATRX	546	bcgsc.ca	37	X	76907659	76907659	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ATRX	NM_000489	exon15	c.A4502G	p.E1501G	.	.	70	4	111	0	.	248
AUP1	550	bcgsc.ca	37	2	74754458	74754458	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	AUP1	NM_181575	exon10	c.A994G	p.N332D	.	.	57	4	67	0	.	90
B3GAT3	26229	bcgsc.ca	37	11	62389348	62389348	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	B3GAT3	NM_012200	exon1	c.G72A	p.L24L	.	.	48	4	42	0	.	90
B4GALT4	8702	bcgsc.ca	37	3	118931503	118931503	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	B4GALT4	NM_212543	exon9	c.C928A	p.R310R	.	.	52	4	68	0	.	90
BAIAP3	8938	bcgsc.ca	37	16	1390960	1390960	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BAIAP3	NM_003933	exon6	c.T551C	p.I184T	.	.	79	5	64	1	.	91
BANK1	55024	bcgsc.ca	37	4	102951158	102951158	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BANK1	NM_017935	exon10	c.G1636A	p.G546S	.	.	71	4	141	0	.	93
BCAN	63827	bcgsc.ca	37	1	156618591	156618591	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BCAN	NM_198427	exon6	c.T1001C	p.L334P	.	.	67	5	67	0	.	516
BCAR3	8412	bcgsc.ca	37	1	94140384	94140384	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BCAR3	NM_001261409	exon2	c.G103A	p.A35T	.	.	67	4	108	0	.	228
BCAS1	8537	bcgsc.ca	37	20	52612527	52612527	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BCAS1	NM_003657	exon5	c.T786C	p.P262P	.	.	193	6	145	1	.	652
BCL2L12	83596	bcgsc.ca	37	19	50173550	50173550	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BCL2L12	NM_138639	exon6	c.C759G	p.F253L	.	.	87	4	99	0	.	651
BDH2	56898	bcgsc.ca	37	4	104003251	104003251	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BDH2	NM_020139	exon9	c.T671C	p.L224S	.	.	112	6	300	1	.	90
BIRC6	57448	bcgsc.ca	37	2	32602787	32602787	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BIRC6	NM_016252	exon2	c.C457T	p.P153S	.	.	83	4	146	0	.	233
BIRC6	57448	bcgsc.ca	37	2	32836526	32836526	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BIRC6	NM_016252	exon73	c.A14271G	p.K4757K	.	.	69	4	113	0	.	233
BIRC6	57448	ucsc.edu;bcgsc.ca	37	2	32773060	32773060	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BIRC6	NM_016252	exon64	c.A12954G	p.E4318E	.	.	45	4	77	0	.	233
BLM	641	bcgsc.ca	37	15	91352406	91352406	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BLM	NM_000057	exon20	c.A3791G	p.D1264G	.	.	97	6	137	0	.	664
BOLL	66037	bcgsc.ca	37	2	198643716	198643716	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BOLL	NM_197970	exon3	c.A240G	p.R80R	.	.	54	4	75	0	.	92
BTAF1	9044	bcgsc.ca	37	10	93744065	93744065	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BTAF1	NM_003972	exon19	c.A2331G	p.E777E	.	.	81	4	142	0	.	92
BUB1B	701	bcgsc.ca	37	15	40477806	40477806	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	BUB1B	NM_001211	exon8	c.A1021G	p.T341A	.	.	138	5	170	0	.	1509
C11orf24	53838	bcgsc.ca	37	11	68029197	68029197	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C11orf24	NM_022338	exon4	c.G1266A	p.L422L	.	.	156	7	153	0	.	90
C11orf63	79864	bcgsc.ca	37	11	122756830	122756830	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C11orf63	NM_024806	exon2	c.A273G	p.E91E	.	.	60	4	90	0	.	93
C11orf95	65998	broad.mit.edu	37	11	63533331	63533331	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001144936	exon2	c.A585G	p.E195E	.	.	30	4	51	0	.	.
C12orf40	283461	ucsc.edu;bcgsc.ca	37	12	40040182	40040182	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C12orf40	NM_001031748	exon4	c.C254T	p.P85L	.	.	42	4	93	0	.	96
C12orf43	64897	ucsc.edu	37	12	121448945	121448945	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C12orf43	NM_022895	exon2	c.T150C	p.A50A	.	.	33	4	62	0	.	90
C12orf66	144577	bcgsc.ca	37	12	64587687	64587687	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C12orf66	NM_152440	exon3	c.G1273A	p.E425K	.	.	83	4	118	1	.	515
C16orf54	283897	ucsc.edu;bcgsc.ca	37	16	29755768	29755768	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_175900	exon2	c.T505C	p.W169R	.	.	42	4	35	0	.	.
C16orf88	400506	bcgsc.ca	37	16	19725816	19725816	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C16orf88	NM_001012991	exon2	c.G542A	p.G181E	.	.	71	4	89	0	.	68
C17orf78	284099	bcgsc.ca	37	17	35734879	35734879	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_173625	exon2	c.A121G	p.S41G	.	.	202	6	296	1	.	.
C19orf57	79173	bcgsc.ca	37	19	14003700	14003700	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C19orf57	NM_024323	exon5	c.T292C	p.S98P	.	.	124	6	160	1	.	93
C1orf101	257044	bcgsc.ca	37	1	244715937	244715937	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C1orf101	NM_173807	exon9	c.A850G	p.R284G	.	.	166	6	230	0	.	154
C1QBP	708	ucsc.edu;bcgsc.ca	37	17	5336663	5336663	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C1QBP	NM_001212	exon5	c.T649C	p.S217P	.	.	37	4	83	0	.	91
C2CD3	26005	bcgsc.ca	37	11	73843967	73843967	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C2CD3	NM_015531	exon7	c.T1139C	p.L380P	.	.	158	5	196	0	.	75
C2orf16	84226	bcgsc.ca	37	2	27800062	27800062	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C2orf16	NM_032266	exon1	c.A623G	p.D208G	.	.	72	4	98	0	.	67
C2orf78	388960	bcgsc.ca	37	2	74043728	74043728	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C2orf78	NM_001080474	exon3	c.A2378G	p.Q793R	.	.	71	4	89	0	.	24
C3	718	bcgsc.ca	37	19	6711041	6711041	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C3	NM_000064	exon12	c.T1436C	p.M479T	.	.	87	4	125	0	.	95
C5	727	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	123792742	123792742	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C5	NM_001735	exon7	c.A691G	p.I231V	.	.	186	88	389	0	.	92
C5orf22	55322	bcgsc.ca	37	5	31538694	31538694	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C5orf22	NM_018356	exon4	c.T705C	p.T235T	.	.	78	4	100	0	.	92
C5orf30	90355	bcgsc.ca	37	5	102611878	102611878	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C5orf30	NM_033211	exon3	c.A258G	p.E86E	.	.	75	4	111	0	.	68
C7orf41	222166	bcgsc.ca	37	7	30174857	30174857	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C7orf41	NM_152793	exon1	c.C105T	p.A35A	.	.	71	5	88	0	.	90
C8B	732	bcgsc.ca	37	1	57415271	57415271	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C8B	NM_000066	exon6	c.G821A	p.R274Q	.	.	96	4	129	0	.	92
C9orf24	84688	ucsc.edu;bcgsc.ca	37	9	34385758	34385758	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	C9orf24	NM_032596	exon2	c.C157A	p.R53R	.	.	36	4	113	0	.	91
CABIN1	23523	bcgsc.ca	37	22	24456461	24456461	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CABIN1	NM_001199281	exon12	c.C1474A	p.L492M	.	.	57	4	67	0	.	94
CACNA2D4	93589	bcgsc.ca	37	12	1995143	1995143	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CACNA2D4	NM_172364	exon9	c.A1056G	p.R352R	.	.	58	4	72	0	.	23
CALCA	796	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	14990439	14990439	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CALCA	NM_001741	exon4	c.T332A	p.I111N	.	.	130	64	190	0	.	514
CAMKK2	10645	bcgsc.ca	37	12	121712139	121712139	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CAMKK2	NM_153500	exon2	c.T191C	p.V64A	.	.	71	4	92	0	.	450
CAMKV	79012	hgsc.bcm.edu	37	3	49897070	49897070	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CAMKV	NM_024046	exon11	c.1187delC	p.P396fs	.	.	187	17	200	0	.	613
CAND1	55832	bcgsc.ca	37	12	67699999	67699999	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CAND1	NM_018448	exon10	c.T2551C	p.L851L	.	.	94	4	145	0	.	516
CAPRIN1	4076	bcgsc.ca	37	11	34110998	34110998	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CAPRIN1	NM_203364	exon12	c.A1288G	p.T430A	.	.	60	4	84	0	.	91
CASP7	840	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	115457351	115457351	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CASP7	NM_001267057	exon2	c.G323A	p.R108H	.	.	75	17	126	0	.	660
CCDC112	153733	bcgsc.ca	37	5	114603602	114603602	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CCDC112	NM_001040440	exon10	c.T1561C	p.W521R	.	.	159	6	216	0	.	90
CCDC150	284992	bcgsc.ca	37	2	197521397	197521397	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001080539	exon3	c.A217G	p.S73G	.	.	134	5	125	0	.	.
CCDC178	374864	bcgsc.ca	37	18	30791873	30791873	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001105528	exon19	c.T2225C	p.L742P	.	.	81	4	121	0	.	.
CCDC30	728621	bcgsc.ca	37	1	43076707	43076707	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CCDC30	NM_001080850	exon10	c.A1442G	p.E481G	.	.	76	4	116	0	.	90
CCDC47	57003	bcgsc.ca	37	17	61843319	61843319	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CCDC47	NM_020198	exon2	c.G217A	p.G73R	.	.	92	4	166	0	.	90
CCDC78	124093	bcgsc.ca	37	16	775280	775280	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CCDC78	NM_001031737	exon5	c.A449G	p.N150S	.	.	19	3	37	0	.	91
CCPG1	9236	bcgsc.ca	37	15	55677909	55677909	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CCPG1	NM_020739	exon3	c.T64C	p.S22P	.	.	81	4	85	0	.	91
CCSER2	54462	bcgsc.ca	37	10	86237422	86237422	+	Splice_Site	SNP	T	T	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_018999	exon9	c.2325+2T>A	.	.	.	69	4	99	0	.	.
CCT6B	10693	bcgsc.ca	37	17	33267638	33267638	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CCT6B	NM_006584	exon8	c.A888G	p.G296G	.	.	53	4	89	0	.	91
CD101	9398	bcgsc.ca	37	1	117561014	117561014	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CD101	NM_001256109	exon6	c.T1849C	p.S617P	.	.	66	4	116	1	.	94
CD109	135228	bcgsc.ca	37	6	74516692	74516692	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CD109	NM_133493	exon25	c.A3086G	p.D1029G	.	.	69	4	104	0	.	155
CD27	939	ucsc.edu;bcgsc.ca	37	12	6559457	6559457	+	Silent	SNP	C	C	T	rs199876113		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CD27	NM_001242	exon3	c.C387T	p.T129T	.	.	37	4	47	0	C|0.999;T|0.000	659
CDC25B	994	bcgsc.ca	37	20	3781980	3781980	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CDC25B	NM_021873	exon8	c.A785G	p.E262G	.	.	68	4	86	0	.	849
CDC25C	995	bcgsc.ca	37	5	137666775	137666775	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CDC25C	NM_001790	exon2	c.T95C	p.L32P	.	.	75	5	82	0	.	846
CDH12	1010	bcgsc.ca	37	5	21760766	21760766	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CDH12	NM_004061	exon13	c.G1534T	p.A512S	.	.	59	4	72	0	.	92
CDH19	28513	bcgsc.ca	37	18	64212081	64212081	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CDH19	NM_021153	exon6	c.A835G	p.M279V	.	.	76	4	183	0	.	516
CDHR4	389118	bcgsc.ca	37	3	49829381	49829381	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001007540	exon16	c.T2150C	p.L717P	.	.	64	5	58	0	.	.
CDK17	5128	bcgsc.ca	37	12	96692720	96692720	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	CDK17,NS,carcinoma,-1	CDK17	NM_001170464	exon7	c.A642G	p.T214T	.	.	98	4	135	0	.	550
CDK5RAP3	80279	ucsc.edu;bcgsc.ca	37	17	46053334	46053334	+	Silent	SNP	A	A	G	rs202125432	byfrequency	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CDK5RAP3	NM_176096	exon8	c.A753G	p.E251E	.	.	31	7	55	1	A|0.949;G|0.051	226
CDK6	1021	bcgsc.ca	37	7	92355050	92355050	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CDK6	NM_001259	exon4	c.C427G	p.H143D	.	.	73	4	118	0	.	1402
CDK7	1022	bcgsc.ca	37	5	68550472	68550472	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CDK7	NM_001799	exon4	c.G204A	p.E68E	.	.	94	4	165	0	.	964
CDKL5	6792	ucsc.edu;bcgsc.ca	37	X	18664147	18664147	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CDKL5	NM_003159	exon19	c.A2734G	p.R912G	.	.	34	4	63	0	.	838
CELA3A	10136	bcgsc.ca	37	1	22329515	22329515	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CELA3A	NM_005747	exon2	c.T63C	p.P21P	.	.	57	5	102	0	.	45
CENPC1	1060	bcgsc.ca	37	4	68405582	68405582	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CENPC1	NM_001812	exon4	c.T207C	p.T69T	.	.	126	5	218	0	.	205
CEP78	84131	bcgsc.ca	37	9	80879119	80879119	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CEP78	NM_001098802	exon13	c.C1515T	p.A505A	.	.	90	4	190	0	.	69
CEP85L	387119	bcgsc.ca	37	6	118801581	118801581	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001178035	exon10	c.A1850G	p.Q617R	.	.	70	4	145	0	.	.
CEP85L	387119	bcgsc.ca	37	6	118887377	118887377	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001178035	exon4	c.C344T	p.S115F	.	.	134	5	228	0	.	.
CERS5	91012	bcgsc.ca	37	12	50529813	50529813	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_147190	exon7	c.G676T	p.G226W	.	.	90	4	117	0	.	.
CETN2	1069	bcgsc.ca	37	X	151998227	151998227	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CETN2	NM_004344	exon2	c.A81G	p.E27E	.	.	139	6	152	0	.	130
CGNL1	84952	bcgsc.ca	37	15	57754040	57754040	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CGNL1	NM_001252335	exon9	c.T2353C	p.Y785H	.	.	28	3	95	0	.	100
CGNL1	84952	bcgsc.ca	37	15	57836697	57836697	+	Silent	SNP	C	C	T	rs148984093		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CGNL1	NM_001252335	exon17	c.C3402T	p.I1134I	.	.	65	4	69	0	C|1.000;T|0.000	100
CHD7	55636	bcgsc.ca	37	8	61763634	61763634	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CHD7	NM_017780	exon27	c.A5578G	p.T1860A	.	.	101	6	111	0	.	141
CHPF	79586	bcgsc.ca	37	2	220404741	220404741	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CHPF	NM_024536	exon4	c.A1692G	p.A564A	.	.	63	5	75	0	.	90
CHRDL1	91851	bcgsc.ca	37	X	109964682	109964682	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CHRDL1	NM_001143981	exon5	c.A378G	p.G126G	.	.	92	4	163	0	.	130
CHRNB4	1143	bcgsc.ca	37	15	78927804	78927804	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CHRNB4	NM_000750	exon2	c.T181C	p.S61P	.	.	79	4	60	0	.	90
CISH	1154	hgsc.bcm.edu;bcgsc.ca	37	3	50645109	50645109	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CISH	NM_013324	exon4	c.757delG	p.A253fs	.	.	76	46	140	0	.	710
CIZ1	25792	bcgsc.ca	37	9	130940741	130940741	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CIZ1	NM_001257975	exon9	c.G1617A	p.V539V	.	.	68	4	106	0	.	92
CLDN20	49861	bcgsc.ca	37	6	155597108	155597108	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CLDN20	NM_001001346	exon2	c.C255T	p.V85V	.	.	68	4	106	0	.	90
CLDN8	9073	bcgsc.ca	37	21	31588118	31588118	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CLDN8	NM_199328	exon1	c.T126C	p.V42V	.	.	102	4	113	2	.	90
CLK3	1198	bcgsc.ca	37	15	74919983	74919983	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CLK3	NM_001130028	exon9	c.A1460G	p.H487R	.	.	133	5	207	0	.	358
CLN5	1203	ucsc.edu;bcgsc.ca	37	13	77569324	77569324	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CLN5	NM_006493	exon2	c.A447G	p.P149P	.	.	56	6	107	1	.	91
CLNK	116449	bcgsc.ca	37	4	10669482	10669482	+	Splice_Site	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CLNK	NM_052964	exon3	c.11+1G>A	.	.	.	59	4	141	0	.	23
CLUH	23277	bcgsc.ca	37	17	2595093	2595093	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_015229	exon24	c.T3634C	p.Y1212H	.	.	34	4	39	0	.	.
CMBL	134147	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	10288612	10288612	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CMBL	NM_138809	exon3	c.A245T	p.Q82L	.	.	60	16	57	0	.	69
CNGA1	1259	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	47939598	47939598	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CNGA1	NM_001142564	exon10	c.A1120G	p.M374V	.	.	92	43	140	0	.	92
CNOT1	23019	bcgsc.ca	37	16	58559930	58559930	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CNOT1	NM_016284	exon45	c.C6566T	p.P2189L	.	.	62	4	99	0	.	95
CNOT8	9337	bcgsc.ca	37	5	154250274	154250274	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CNOT8	NM_004779	exon4	c.A365G	p.Q122R	.	.	157	5	149	1	.	90
CNTFR	1271	bcgsc.ca	37	9	34564684	34564684	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CNTFR	NM_147164	exon4	c.G232A	p.G78S	.	.	72	4	126	0	.	518
CNTNAP3	79937	bcgsc.ca;mdanderson.org	37	9	39149891	39149891	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CNTNAP3	NM_033655	exon10	c.G1561A	p.D521N	.	.	621	91	1031	4	.	91
CNTRL	11064	bcgsc.ca	37	9	123933747	123933747	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CNTRL	NM_007018	exon38	c.A6338G	p.Q2113R	.	.	105	5	162	0	.	661
COA4	51287	broad.mit.edu	37	11	73584168	73584168	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_016565	exon2	c.C256T	p.H86Y	.	.	88	5	86	0	.	.
COBLL1	22837	bcgsc.ca	37	2	165561021	165561021	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	COBLL1	NM_014900	exon8	c.G1158T	p.Q386H	.	.	69	5	71	0	.	93
COG4	25839	bcgsc.ca	37	16	70524251	70524251	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	COG4	NM_015386	exon13	c.T1692C	p.T564T	.	.	64	4	110	0	.	90
COL11A1	1301	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	103461593	103461593	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	COL11A1	NM_080629	exon27	c.C2283T	p.P761P	.	.	20	16	88	0	.	586
COL15A1	1306	bcgsc.ca	37	9	101812030	101812030	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	COL15A1	NM_001855	exon29	c.A2852G	p.N951S	.	.	124	5	220	1	.	96
COL18A1	80781	bcgsc.ca	37	21	46930104	46930104	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	COL18A1	NM_030582	exon40	c.T4153C	p.S1385P	.	.	89	6	106	1	.	90
COL4A1	1282	bcgsc.ca	37	13	110828859	110828859	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	COL4A1	NM_001845	exon36	c.A2970G	p.G990G	.	.	71	4	144	0	.	654
COL6A5	256076	bcgsc.ca	37	3	130114035	130114035	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_153264	exon8	c.G3295A	p.A1099T	.	.	140	5	137	0	.	.
COL6A5	256076	bcgsc.ca	37	3	130137755	130137755	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_153264	exon25	c.A4930G	p.T1644A	.	.	75	4	135	0	.	.
COL7A1	1294	bcgsc.ca	37	3	48623008	48623008	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	COL7A1	NM_000094	exon31	c.C3876T	p.A1292A	.	.	53	4	57	0	.	160
COLQ	8292	bcgsc.ca	37	3	15515507	15515507	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	COLQ	NM_005677	exon10	c.A636G	p.K212K	.	.	148	5	216	0	.	90
CORO2B	10391	bcgsc.ca	37	15	69011523	69011523	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CORO2B	NM_006091	exon10	c.G1121A	p.G374D	.	.	39	4	49	0	.	158
COX11	1353	bcgsc.ca	37	17	53040768	53040768	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	COX11	NM_001162861	exon3	c.G547A	p.A183T	.	.	79	4	150	0	.	91
COX4I2	84701	bcgsc.ca	37	20	30232630	30232630	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	COX4I2	NM_032609	exon5	c.A439G	p.M147V	.	.	85	4	76	1	.	227
CPA5	93979	bcgsc.ca	37	7	129987635	129987635	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CPA5	NM_080385	exon4	c.G145A	p.D49N	.	.	80	4	69	0	.	92
CPED1	79974	bcgsc.ca	37	7	120907336	120907336	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_024913	exon21	c.G2701A	p.G901R	.	.	89	5	131	0	.	.
CPQ	10404	bcgsc.ca	37	8	97797254	97797254	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_016134	exon2	c.T129C	p.C43C	.	.	74	4	74	0	.	.
CPT1A	1374	bcgsc.ca	37	11	68560830	68560830	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CPT1A	NM_001876	exon9	c.A920G	p.Q307R	.	.	73	4	109	0	.	149
CPXM1	56265	ucsc.edu	37	20	2778895	2778895	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CPXM1	NM_001184699	exon4	c.G493A	p.A165T	.	.	44	4	55	0	.	94
CPZ	8532	bcgsc.ca	37	4	8602909	8602909	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CPZ	NM_001014447	exon3	c.T181C	p.F61L	.	.	99	5	120	0	.	93
CRHR1	1394	bcgsc.ca	37	17	43911399	43911399	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CRHR1	NM_001145146	exon13	c.T1179C	p.C393C	.	.	89	4	141	1	.	522
CRIP3	401262	ucsc.edu;bcgsc.ca	37	6	43274203	43274203	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CRIP3	NM_206922	exon5	c.T381C	p.C127C	.	.	42	4	65	0	.	91
CROCC	9696	ucsc.edu;bcgsc.ca	37	1	17274950	17274950	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CROCC	NM_014675	exon18	c.G2639A	p.G880D	.	.	26	4	41	0	.	137
CSGALNACT2	55454	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	43650967	43650967	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CSGALNACT2	NM_018590	exon2	c.C370T	p.L124F	.	.	66	33	97	0	.	69
CSMD1	64478	bcgsc.ca	37	8	2954381	2954381	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CSMD1	NM_033225	exon47	c.A7128G	p.E2376E	.	.	76	4	211	0	.	86
CSMD2	114784	bcgsc.ca	37	1	34015946	34015946	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CSMD2	NM_052896	exon55	c.G8316A	p.V2772V	.	.	63	4	73	0	.	103
CSMD2	114784	ucsc.edu;bcgsc.ca	37	1	34037319	34037319	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CSMD2	NM_052896	exon52	c.T7776C	p.T2592T	.	.	42	4	60	0	.	103
CSRP2BP	57325	broad.mit.edu	37	20	18125989	18125989	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CSRP2BP	NM_020536	exon2	c.G372A	p.W124X	.	.	74	5	101	0	.	525
CTNND1	1500	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	57569523	57569523	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CTNND1	NM_001085461	exon7	c.C1275T	p.H425H	.	.	77	36	128	0	.	272
CTPS1	1503	bcgsc.ca	37	1	41461715	41461715	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001905	exon8	c.A847G	p.M283V	.	.	115	5	135	0	.	.
CUBN	8029	bcgsc.ca	37	10	17113921	17113921	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CUBN	NM_001081	exon18	c.T2351C	p.I784T	.	.	58	4	94	0	.	166
CUEDC1	404093	hgsc.bcm.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	55945598	55945598	+	Missense_Mutation	SNP	C	C	G	rs34800498	byfrequency;alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CUEDC1	NM_001271875	exon8	c.G947C	p.R316P	.	.	76	43	102	0	C|0.958;T|0.042	228
CUL3	8452	bcgsc.ca	37	2	225362482	225362482	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CUL3	NM_001257198	exon12	c.A1713G	p.G571G	.	.	74	4	107	0	.	229
CUL4B	8450	bcgsc.ca	37	X	119678397	119678397	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CUL4B	NM_003588	exon8	c.A1076G	p.N359S	.	.	145	5	201	0	.	227
CXADRP2	646243	bcgsc.ca	37	15	22015731	22015731	+	RNA	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	.	.	.	.	.	.	113	42	147	0	.	.
CXorf23	256643	bcgsc.ca	37	X	19971116	19971116	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CXorf23	NM_198279	exon6	c.A1619G	p.E540G	.	.	81	4	98	0	.	130
CXorf36	79742	bcgsc.ca	37	X	45051162	45051162	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CXorf36	NM_176819	exon2	c.T332C	p.V111A	.	.	59	4	55	0	.	130
CYLD	1540	bcgsc.ca	37	16	50825587	50825587	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CYLD	NM_015247	exon16	c.C2227A	p.L743M	.	.	83	4	133	0	.	2444
CYLD	1540	bcgsc.ca	37	16	50828312	50828312	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CYLD	NM_015247	exon19	c.T2659C	p.F887L	.	.	126	5	231	1	.	2444
CYP19A1	1588	bcgsc.ca	37	15	51510736	51510736	+	Splice_Site	SNP	A	A	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CYP19A1	NM_031226	exon8	c.743+2T>A	.	.	.	69	4	86	0	.	93
CYP2C18	1562	bcgsc.ca	37	10	96493130	96493130	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CYP2C18	NM_000772	exon8	c.C1226T	p.P409L	.	.	89	4	170	0	.	95
CYP3A7	1551	bcgsc.ca	37	7	99311109	99311109	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	CYP3A7	NM_000765	exon9	c.A848G	p.D283G	.	.	133	6	165	1	.	91
DAO	1610	bcgsc.ca	37	12	109294263	109294263	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DAO	NM_001917	exon11	c.A996G	p.R332R	.	.	52	5	84	0	.	92
DBNDD2	55861	bcgsc.ca	37	20	44037057	44037057	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DBNDD2	NM_001048225	exon1	c.T256C	p.F86L	.	.	112	5	106	0	.	536
DCBLD2	131566	bcgsc.ca	37	3	98530111	98530111	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DCBLD2	NM_080927	exon12	c.T1503C	p.F501F	.	.	226	8	264	0	.	92
DCTN6	10671	bcgsc.ca	37	8	30038002	30038002	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DCTN6	NM_006571	exon6	c.332-2A>G	.	.	.	59	4	184	0	.	91
DCUN1D4	23142	broad.mit.edu;ucsc.edu	37	4	52779748	52779748	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DCUN1D4	NM_001040402	exon11	c.T877C	p.X293Q	.	.	34	5	48	0	.	92
DDB1	1642	ucsc.edu	37	11	61081653	61081653	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DDB1	NM_001923	exon14	c.G1619T	p.C540F	.	.	95	12	105	5	.	661
DDX17	10521	ucsc.edu;bcgsc.ca	37	22	38897272	38897272	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DDX17	NM_006386	exon2	c.G301A	p.G101S	.	.	29	4	43	0	.	229
DDX46	9879	bcgsc.ca	37	5	134121240	134121240	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DDX46	NM_014829	exon11	c.G1428A	p.V476V	.	.	67	4	95	0	.	227
DEF8	54849	bcgsc.ca	37	16	90027412	90027412	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DEF8	NM_207514	exon7	c.C771T	p.H257H	.	.	95	4	118	0	.	68
DENND5A	23258	bcgsc.ca	37	11	9200461	9200461	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DENND5A	NM_001243254	exon7	c.A1615G	p.S539G	.	.	82	4	141	0	.	91
DENND5A	23258	bcgsc.ca	37	11	9225267	9225267	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DENND5A	NM_001243254	exon4	c.A889G	p.N297D	.	.	88	4	127	0	.	91
DGKD	8527	bcgsc.ca	37	2	234375799	234375799	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DGKD	NM_152879	exon28	c.A3374G	p.K1125R	.	.	84	4	151	0	.	676
DGKI	9162	bcgsc.ca	37	7	137206656	137206656	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DGKI	NM_004717	exon21	c.A2204G	p.D735G	.	.	97	4	116	0	.	228
DHDDS	79947	bcgsc.ca	37	1	26772917	26772917	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DHDDS	NM_001243564	exon5	c.A434G	p.Y145C	.	.	52	4	101	0	.	93
DHX37	57647	bcgsc.ca	37	12	125451766	125451766	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DHX37	NM_032656	exon12	c.1409-2A>G	.	.	.	43	4	54	0	.	227
DHX38	9785	bcgsc.ca	37	16	72142190	72142190	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DHX38	NM_014003	exon22	c.C3029T	p.T1010I	.	.	85	4	81	0	.	227
DHX58	79132	bcgsc.ca	37	17	40263454	40263454	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DHX58	NM_024119	exon4	c.T230C	p.V77A	.	.	63	4	61	0	.	90
DIS3	22894	bcgsc.ca	37	13	73351614	73351614	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DIS3	NM_014953	exon4	c.A598G	p.S200G	.	.	159	6	270	2	.	90
DIS3L2	129563	bcgsc.ca	37	2	233001428	233001428	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DIS3L2	NM_152383	exon8	c.G949T	p.G317W	.	.	147	5	174	0	.	136
DISP1	84976	bcgsc.ca	37	1	223116300	223116300	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DISP1	NM_032890	exon4	c.A135G	p.A45A	.	.	71	4	99	2	.	68
DIXDC1	85458	bcgsc.ca	37	11	111888568	111888568	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DIXDC1	.	.	.	.	.	.	148	5	201	0	.	91
DKC1	1736	bcgsc.ca	37	X	153997467	153997467	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DKC1	NM_001363	exon9	c.T797C	p.V266A	.	.	93	5	91	0	.	227
DLG1	1739	bcgsc.ca	37	3	196771555	196771555	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DLG1	NM_004087	exon26	c.A2720G	p.K907R	.	.	217	6	207	0	.	118
DLG4	1742	bcgsc.ca	37	17	7121960	7121960	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DLG4	NM_001365	exon3	c.20-2A>G	.	.	.	9	3	37	0	.	24
DLGAP1	9229	bcgsc.ca	37	18	3879861	3879861	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DLGAP1	NM_001242761	exon4	c.T208C	p.F70L	.	.	65	4	77	0	.	229
DLGAP3	58512	ucsc.edu	37	1	35334566	35334566	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DLGAP3	NM_001080418	exon7	c.T2125C	p.F709L	.	.	42	4	54	0	.	71
DMD	1756	bcgsc.ca	37	X	31224756	31224756	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DMD	NM_004006	exon66	c.T9592C	p.S3198P	.	.	89	4	112	0	.	265
DNAAF3	352909	bcgsc.ca	37	19	55676779	55676779	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001256714	exon4	c.T485C	p.F162S	.	.	65	4	99	0	.	.
DNAH10	196385	bcgsc.ca	37	12	124285896	124285896	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAH10	NM_207437	exon15	c.A2177G	p.E726G	.	.	118	5	175	0	.	95
DNAH10	196385	bcgsc.ca	37	12	124297722	124297722	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAH10	NM_207437	exon19	c.T2802C	p.R934R	.	.	92	4	134	0	.	95
DNAH11	8701	bcgsc.ca	37	7	21827057	21827057	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAH11	.	.	.	.	.	.	67	4	85	0	.	146
DNAH1	25981	bcgsc.ca	37	3	52434355	52434355	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAH1	NM_015512	exon78	c.A12691G	p.T4231A	.	.	85	4	101	0	.	67
DNAH2	146754	bcgsc.ca	37	17	7701103	7701103	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAH2	NM_020877	exon52	c.T8186C	p.V2729A	.	.	50	4	126	0	.	102
DNAH3	55567	bcgsc.ca	37	16	20976274	20976274	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAH3	NM_017539	exon53	c.A8932G	p.K2978E	.	.	165	6	152	1	.	167
DNAH6	1768	bcgsc.ca	37	2	84780130	84780130	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAH6	NM_001370	exon10	c.T1574C	p.L525P	.	.	83	4	161	0	.	69
DNAH6	1768	broad.mit.edu;bcgsc.ca	37	2	84881832	84881832	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAH6	NM_001370	exon35	c.A5683G	p.M1895V	.	.	114	6	216	0	.	69
DNAH8	1769	bcgsc.ca	37	6	38980012	38980012	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAH8	NM_001206927	exon90	c.A13393G	p.M4465V	.	.	75	4	93	0	.	615
DNAI1	27019	bcgsc.ca	37	9	34497184	34497184	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAI1	NM_012144	exon10	c.T888C	p.D296D	.	.	73	4	108	0	.	90
DNAJA1	3301	ucsc.edu;bcgsc.ca	37	9	33037026	33037026	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAJA1	NM_001539	exon8	c.G888A	p.K296K	.	.	38	4	72	0	.	226
DNAJA2	10294	bcgsc.ca	37	16	46993017	46993017	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAJA2	NM_005880	exon8	c.A945G	p.E315E	.	.	51	4	54	0	.	226
DNAJC6	9829	bcgsc.ca	37	1	65830448	65830448	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DNAJC6	NM_001256864	exon2	c.A324G	p.R108R	.	.	68	4	67	0	.	272
DNTTIP2	30836	bcgsc.ca	37	1	94338747	94338747	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_014597	exon4	c.A1830G	p.T610T	.	.	76	4	110	0	.	.
DOCK1	1793	bcgsc.ca	37	10	128829981	128829981	+	Silent	SNP	C	C	A	rs200438371		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DOCK1	NM_001380	exon17	c.C1629A	p.T543T	.	.	76	4	85	0	C|0.999;A|0.001	698
DOCK1	1793	bcgsc.ca	37	10	129172432	129172432	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DOCK1	NM_001380	exon35	c.A3566G	p.H1189R	.	.	51	4	104	1	.	698
DOCK1	1793	bcgsc.ca	37	10	129237365	129237365	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DOCK1	NM_001380	exon49	c.A5072G	p.E1691G	.	.	43	4	98	0	.	698
DOCK7	85440	bcgsc.ca	37	1	63021542	63021542	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DOCK7	NM_001271999	exon21	c.T2550C	p.H850H	.	.	66	4	94	0	.	92
DOK5	55816	bcgsc.ca	37	20	53266975	53266975	+	Missense_Mutation	SNP	T	T	C	rs201718507	alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DOK5	NM_018431	exon8	c.T878C	p.L293P	.	.	134	5	131	0	.	227
DOK7	285489	ucsc.edu;bcgsc.ca	37	4	3494936	3494936	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DOK7	NM_173660	exon7	c.C1223A	p.P408Q	.	.	33	4	63	0	.	91
DOPEY1	23033	bcgsc.ca	37	6	83858532	83858532	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DOPEY1	NM_015018	exon27	c.A5787G	p.K1929K	.	.	64	4	116	0	.	155
DPF3	8110	ucsc.edu;bcgsc.ca	37	14	73181159	73181159	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DPF3	NM_012074	exon6	c.A576G	p.E192E	.	.	34	4	54	0	.	1
DPP6	1804	bcgsc.ca	37	7	154263979	154263979	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DPP6	NM_130797	exon5	c.T605C	p.L202P	.	.	84	4	113	0	.	652
DPP8	54878	bcgsc.ca	37	15	65782614	65782614	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DPP8	NM_197960	exon7	c.G787T	p.A263S	.	.	20	3	50	0	.	91
DPY19L3	147991	bcgsc.ca	37	19	32959659	32959659	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DPY19L3	NM_001172774	exon16	c.A1637G	p.E546G	.	.	177	6	197	0	.	72
DPYD	1806	bcgsc.ca	37	1	97544537	97544537	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DPYD	NM_000110	exon23	c.T3073C	p.C1025R	.	.	73	4	91	0	.	278
DPYD	1806	bcgsc.ca	37	1	98157281	98157281	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	DPYD,NS,carcinoma,+1	DPYD	NM_000110	exon7	c.G754A	p.G252S	.	.	108	6	154	1	.	278
DQX1	165545	bcgsc.ca	37	2	74746183	74746183	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DQX1	NM_133637	exon11	c.G1981A	p.E661K	.	.	76	4	112	0	.	92
DRD2	1813	bcgsc.ca	37	11	113286289	113286289	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DRD2	NM_016574	exon5	c.T577C	p.S193P	.	.	178	8	245	1	.	92
DROSHA	29102	bcgsc.ca	37	5	31429602	31429602	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DROSHA	NM_013235	exon26	c.C3196A	p.R1066S	.	.	180	6	289	0	.	227
DTNA	1837	bcgsc.ca	37	18	32428274	32428274	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DTNA	NM_001390	exon13	c.C1280T	p.S427L	.	.	65	4	88	0	.	153
DTNB	1838	ucsc.edu;bcgsc.ca	37	2	25799831	25799831	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DTNB	NM_021907	exon8	c.T752C	p.M251T	.	.	44	4	89	0	.	137
DUOX2	50506	bcgsc.ca	37	15	45397864	45397864	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DUOX2	NM_014080	exon18	c.T2311C	p.F771L	.	.	79	4	75	0	.	95
DUS1L	64118	bcgsc.ca	37	17	80019512	80019512	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DUS1L	NM_022156	exon7	c.C679G	p.Q227E	.	.	76	4	88	0	.	91
DUS1L	64118	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	80017940	80017940	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DUS1L	NM_022156	exon11	c.G1052T	p.G351V	.	.	138	25	122	1	.	91
DUSP12	11266	bcgsc.ca	37	1	161719851	161719851	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DUSP12	NM_007240	exon1	c.A260G	p.E87G	.	.	126	5	96	0	.	226
DYNC1H1	1778	bcgsc.ca	37	14	102510937	102510937	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	DYNC1H1	NM_001376	exon72	c.A12908G	p.E4303G	.	.	73	4	123	0	.	98
EDARADD	128178	bcgsc.ca	37	1	236590691	236590691	+	Splice_Site	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EDARADD	NM_145861	exon4	c.161-1G>A	.	.	.	66	4	110	0	.	90
EDEM1	9695	bcgsc.ca	37	3	5246761	5246761	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EDEM1	NM_014674	exon6	c.T1052C	p.V351A	.	.	82	4	118	0	.	137
EEA1	8411	bcgsc.ca	37	12	93206788	93206788	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EEA1	NM_003566	exon16	c.A2011G	p.T671A	.	.	153	5	195	1	.	229
EFCAB4A	283229	bcgsc.ca	37	11	829426	829426	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EFCAB4A	NM_173584	exon4	c.A344G	p.E115G	.	.	78	4	97	0	.	90
EFEMP1	2202	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	56094351	56094351	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EFEMP1	NM_001039349	exon11	c.G1339T	p.A447S	.	.	36	18	83	1	.	520
EIF2AK4	440275	bcgsc.ca	37	15	40300255	40300255	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	EIF2AK4,NS,carcinoma,0	EIF2AK4	NM_001013703	exon25	c.G3435T	p.P1145P	.	.	138	6	183	0	.	757
EIF2AK4	440275	bcgsc.ca	37	15	40318226	40318226	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EIF2AK4	NM_001013703	exon33	c.A4438G	p.T1480A	.	.	61	4	82	0	.	757
EIF4A3	9775	bcgsc.ca	37	17	78113869	78113869	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EIF4A3	NM_014740	exon5	c.A443G	p.E148G	.	.	51	4	61	0	.	227
EIF4G3	8672	bcgsc.ca	37	1	21183955	21183955	+	Missense_Mutation	SNP	C	C	T	rs141698528	byfrequency;alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EIF4G3	NM_001198801	exon23	c.G3220A	p.V1074I	.	.	61	4	119	0	C|1.000;G|0.000	91
ELMO2	63916	bcgsc.ca	37	20	45003003	45003003	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ELMO2	NM_182764	exon14	c.T1247C	p.M416T	.	.	85	5	89	0	.	91
ELMOD3	84173	bcgsc.ca	37	2	85595874	85595874	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ELMOD3	NM_001135022	exon7	c.A265G	p.T89A	.	.	68	4	97	0	.	92
ELOVL1	64834	bcgsc.ca	37	1	43829716	43829716	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ELOVL1	NM_022821	exon8	c.G711T	p.W237C	.	.	158	5	195	0	.	90
EML5	161436	bcgsc.ca	37	14	89082585	89082585	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EML5	NM_183387	exon42	c.C5798A	p.A1933E	.	.	70	4	134	0	.	93
EML5	161436	bcgsc.ca	37	14	89105154	89105154	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EML5	NM_183387	exon31	c.A4335G	p.V1445V	.	.	60	4	100	0	.	93
EML6	400954	bcgsc.ca	37	2	55056511	55056511	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001039753	exon6	c.A744G	p.E248E	.	.	80	4	130	0	.	.
EMR1	2015	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	6919616	6919616	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EMR1	NM_001256253	exon13	c.G1478A	p.R493H	.	.	133	60	188	0	.	526
ENPP1	5167	bcgsc.ca	37	6	132181559	132181559	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ENPP1	NM_006208	exon8	c.C828T	p.D276D	.	.	90	4	160	0	.	95
ENTPD2	954	bcgsc.ca	37	9	139946720	139946720	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ENTPD2	NM_203468	exon2	c.A198G	p.T66T	.	.	51	4	107	0	.	90
EP300	2033	bcgsc.ca	37	22	41573904	41573904	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EP300	NM_001429	exon31	c.T6189C	p.S2063S	.	.	82	4	102	0	.	2011
EPHX1	2052	bcgsc.ca	37	1	226032297	226032297	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EPHX1	NM_001136018	exon8	c.A1139G	p.Q380R	.	.	42	4	53	0	.	281
EPYC	1833	bcgsc.ca	37	12	91357957	91357957	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EPYC	NM_004950	exon7	c.T945C	p.R315R	.	.	64	4	134	1	.	91
ERAP1	51752	bcgsc.ca	37	5	96126339	96126339	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ERAP1	NM_001198541	exon9	c.G1328A	p.C443Y	.	.	67	4	119	0	.	70
ERO1L	30001	ucsc.edu;bcgsc.ca	37	14	53149118	53149118	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ERO1L	NM_014584	exon3	c.G243T	p.L81L	.	.	48	4	119	0	.	90
ESPNP	284729	bcgsc.ca	37	1	17017747	17017747	+	RNA	SNP	A	A	G	rs201754604	byfrequency	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	.	.	.	.	.	.	82	5	234	2	A|0.973;G|0.027	.
ESR1	2099	bcgsc.ca	37	6	152265483	152265483	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	ESR1,brain,glioma,0	ESR1	NM_000125	exon4	c.C936T	p.A312A	.	.	69	5	107	0	.	1042
ESR2	2100	bcgsc.ca	37	14	64716350	64716350	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ESR2	NM_001214902	exon6	c.T1139C	p.L380P	.	.	86	4	183	0	.	611
ETF1	2107	bcgsc.ca	37	5	137853325	137853325	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ETF1	NM_004730	exon4	c.A327G	p.K109K	.	.	136	5	180	0	.	229
ETV4	2118	bcgsc.ca	37	17	41622973	41622973	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ETV4	NM_001986	exon2	c.A13G	p.M5V	.	.	45	4	44	0	.	658
EVC2	132884	bcgsc.ca	37	4	5567031	5567031	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EVC2	NM_147127	exon21	c.A3613G	p.S1205G	.	.	117	5	142	1	.	155
EVC2	132884	bcgsc.ca	37	4	5642459	5642459	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EVC2	NM_147127	exon10	c.G1252A	p.G418S	.	.	94	4	150	0	.	155
EXO1	9156	bcgsc.ca	37	1	242042549	242042549	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EXO1	NM_130398	exon13	c.A2013G	p.A671A	.	.	25	3	62	0	.	661
EXOC3L2	90332	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	45730995	45730995	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EXOC3L2	NM_138568	exon5	c.C329A	p.P110Q	.	.	82	24	85	2	.	91
EYA1	2138	bcgsc.ca	37	8	72211919	72211919	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EYA1	NM_000503	exon8	c.G593A	p.G198E	.	.	75	4	98	0	.	652
EYS	346007	bcgsc.ca	37	6	65622525	65622525	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	EYS	NM_001142800	exon16	c.A2493G	p.G831G	.	.	62	5	162	1	.	660
F13A1	2162	bcgsc.ca	37	6	6251049	6251049	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	F13A1	NM_000129	exon5	c.G685A	p.G229S	.	.	70	4	62	0	.	519
F7	2155	bcgsc.ca	37	13	113771126	113771126	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	F7	NM_000131	exon7	c.C618T	p.A206A	.	.	60	4	57	0	.	90
FAM102A	399665	ucsc.edu;bcgsc.ca	37	9	130705487	130705487	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAM102A	NM_001035254	exon11	c.T1139C	p.V380A	.	.	44	4	66	0	.	91
FAM122A	116224	bcgsc.ca	37	9	71395082	71395082	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAM122A	NM_138333	exon1	c.T2C	p.M1T	.	.	50	5	73	0	.	90
FAM126A	84668	bcgsc.ca	37	7	22985290	22985290	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAM126A	NM_032581	exon11	c.C1484T	p.S495L	.	.	76	4	109	0	.	90
FAM160A2	84067	bcgsc.ca	37	11	6235765	6235765	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAM160A2	NM_032127	exon11	c.G2475A	p.A825A	.	.	60	4	87	0	.	92
FAM184B	27146	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	17710586	17710586	+	Missense_Mutation	SNP	C	C	A	rs61746992	byfrequency;alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAM184B	NM_015688	exon2	c.G823T	p.D275Y	.	.	110	45	147	0	C|0.972;G|0.028	23
FAM186B	84070	bcgsc.ca	37	12	49997112	49997112	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAM186B	NM_032130	exon3	c.G361A	p.E121K	.	.	86	4	147	0	.	91
FAM188A	80013	bcgsc.ca	37	10	15821126	15821126	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAM188A	NM_024948	exon15	c.A1203G	p.E401E	.	.	64	4	119	0	.	228
FAM189A1	23359	bcgsc.ca	37	15	29544648	29544648	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAM189A1	NM_015307	exon3	c.T311C	p.V104A	.	.	122	6	207	0	.	22
FAM19A5	25817	bcgsc.ca	37	22	49103543	49103543	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAM19A5	NM_001082967	exon3	c.A277G	p.T93A	.	.	68	4	118	0	.	90
FAM20B	9917	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	179013021	179013021	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAM20B	NM_014864	exon2	c.C39T	p.L13L	.	.	209	75	127	0	.	93
FAM35A	54537	bcgsc.ca	37	10	88911420	88911420	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAM35A	NM_019054	exon3	c.A309G	p.E103E	.	.	190	6	359	0	.	94
FAM65A	79567	bcgsc.ca	37	16	67575597	67575597	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAM65A	NM_001193523	exon12	c.T1052C	p.V351A	.	.	52	4	70	0	.	92
FAM92A1P2	403315	broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	183959283	183959283	+	RNA	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	.	.	.	.	.	.	73	22	92	1	.	.
FANCD2	2177	bcgsc.ca	37	3	10076415	10076415	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FANCD2	NM_001018115	exon5	c.A310G	p.I104V	.	.	68	4	68	0	.	229
FAT3	120114	bcgsc.ca	37	11	92577221	92577221	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FAT3	NM_001008781	exon18	c.A10688G	p.D3563G	.	.	83	5	118	0	.	73
FBN2	2201	bcgsc.ca	37	5	127622441	127622441	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FBN2	NM_001999	exon55	c.G6981A	p.M2327I	.	.	128	6	200	0	.	146
FBN2	2201	bcgsc.ca	37	5	127730902	127730902	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FBN2	NM_001999	exon9	c.A1144G	p.R382G	.	.	87	5	100	0	.	146
FBN3	84467	bcgsc.ca	37	19	8174243	8174243	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FBN3	NM_032447	exon35	c.A4486G	p.T1496A	.	.	77	4	113	0	.	100
FBXL3	26224	ucsc.edu	37	13	77595785	77595785	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FBXL3	NM_012158	exon2	c.C211T	p.H71Y	.	.	36	5	58	0	.	226
FBXL4	26235	bcgsc.ca	37	6	99374469	99374469	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FBXL4	NM_012160	exon3	c.A396G	p.E132E	.	.	86	4	145	0	.	227
FBXL5	26234	bcgsc.ca	37	4	15613939	15613939	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FBXL5	NM_012161	exon10	c.C1949T	p.A650V	.	.	184	6	231	0	.	226
FBXO7	25793	bcgsc.ca	37	22	32894257	32894257	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FBXO7	NM_012179	exon9	c.T1309C	p.S437P	.	.	142	5	164	1	.	228
FCHO1	23149	ucsc.edu	37	19	17888988	17888988	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FCHO1	NM_001161358	exon18	c.C1302A	p.N434K	.	.	49	4	81	0	.	90
FGFBP1	9982	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	15938165	15938165	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FGFBP1	NM_005130	exon3	c.C91A	p.L31I	.	.	300	107	318	2	.	90
FGFR1OP	11116	bcgsc.ca	37	6	167427032	167427032	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FGFR1OP	NM_007045	exon7	c.A556G	p.S186G	.	.	69	4	88	0	.	683
FIG4	9896	bcgsc.ca	37	6	110081541	110081541	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FIG4	NM_014845	exon11	c.A1226G	p.H409R	.	.	87	4	175	0	.	69
FIZ1	84922	bcgsc.ca	37	19	56109073	56109073	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FIZ1	NM_032836	exon2	c.T159C	p.C53C	.	.	66	6	72	0	.	90
FLAD1	80308	ucsc.edu;bcgsc.ca	37	1	154956204	154956204	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FLAD1	NM_025207	exon1	c.A34G	p.R12G	.	.	41	4	54	0	.	93
FLG	2312	broad.mit.edu	37	1	152276604	152276604	+	Silent	SNP	G	G	A	rs147217287	byfrequency	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FLG	NM_002016	exon3	c.C10758T	p.A3586A	.	.	865	10	748	1	G|0.997;A|0.003	106
FLG	2312	broad.mit.edu	37	1	152284525	152284525	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FLG	NM_002016	exon3	c.T2837C	p.V946A	.	.	567	10	475	2	.	106
FLG	2312	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	152280175	152280175	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FLG	NM_002016	exon3	c.A7187G	p.H2396R	.	.	404	106	393	1	.	106
FLG2	388698	bcgsc.ca	37	1	152327511	152327511	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FLG2	NM_001014342	exon3	c.A2751G	p.S917S	.	.	221	7	216	0	.	151
FLNC	2318	broad.mit.edu	37	7	128494736	128494736	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FLNC	NM_001458	exon41	c.G6997C	p.A2333P	.	.	43	7	46	0	.	141
FLT1	2321	bcgsc.ca	37	13	29041172	29041172	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FLT1	NM_002019	exon3	c.A256G	p.K86E	.	.	128	6	271	0	.	1406
FNTB	2342	ucsc.edu	37	14	65453679	65453679	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FNTB	NM_002028	exon1	c.C8T	p.S3F	.	.	116	4	229	7	.	91
FOCAD	54914	ucsc.edu;bcgsc.ca	37	9	20717832	20717832	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_017794	exon5	c.G97T	p.G33C	.	.	38	4	78	0	.	.
FOXL1	2300	bcgsc.ca	37	16	86613339	86613339	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FOXL1	NM_005250	exon1	c.T1010C	p.V337A	.	.	50	4	72	0	.	227
FRAS1	80144	bcgsc.ca	37	4	79373487	79373487	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FRAS1	NM_025074	exon47	c.T6742C	p.L2248L	.	.	40	4	64	0	.	68
FRMPD1	22844	bcgsc.ca	37	9	37745879	37745879	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FRMPD1	NM_014907	exon16	c.A3850G	p.S1284G	.	.	90	4	152	0	.	159
FRYL	285527	bcgsc.ca	37	4	48517200	48517200	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FRYL	NM_015030	exon56	c.T7782C	p.C2594C	.	.	94	4	137	0	.	69
FST	10468	bcgsc.ca	37	5	52781803	52781803	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FST	NM_013409	exon6	c.A975G	p.E325E	.	.	206	6	247	0	.	90
FXR1	8087	bcgsc.ca	37	3	180693929	180693929	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FXR1	NM_005087	exon17	c.A1715G	p.E572G	.	.	185	6	235	0	.	153
FXR2	9513	bcgsc.ca	37	17	7496318	7496318	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_004860	exon13	c.T1512C	p.S504S	.	.	93	5	232	1	.	.
FXYD7	53822	bcgsc.ca	37	19	35642565	35642565	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	FXYD7	NM_022006	exon5	c.T209C	p.L70P	.	.	155	5	184	0	.	514
GAB1	2549	ucsc.edu;bcgsc.ca	37	4	144381615	144381615	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GAB1	NM_207123	exon9	c.A1868G	p.N623S	.	.	45	5	57	0	.	1146
GAD2	2572	bcgsc.ca	37	10	26518645	26518645	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GAD2	NM_000818	exon7	c.C779A	p.P260Q	.	.	83	4	154	0	.	515
GAL3ST3	89792	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	65810617	65810617	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GAL3ST3	NM_033036	exon3	c.C657T	p.D219D	.	.	40	20	49	0	.	91
GAL3ST4	79690	bcgsc.ca	37	7	99757768	99757768	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GAL3ST4	NM_024637	exon4	c.A1244G	p.D415G	.	.	59	4	89	0	.	47
GALNT13	114805	bcgsc.ca	37	2	154996911	154996911	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GALNT13	NM_052917	exon4	c.A204G	p.K68K	.	.	134	5	206	0	.	95
GALNT3	2591	bcgsc.ca	37	2	166613759	166613759	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GALNT3	NM_004482	exon8	c.1192-2A>G	.	.	.	52	4	45	0	.	92
GALNTL5	168391	bcgsc.ca	37	7	151700024	151700024	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GALNTL5	NM_145292	exon6	c.C884T	p.P295L	.	.	94	5	115	0	.	92
GANAB	23193	bcgsc.ca	37	11	62398194	62398194	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GANAB	NM_198335	exon12	c.C1331T	p.P444L	.	.	78	4	102	0	.	94
GANC	2595	bcgsc.ca	37	15	42632942	42632942	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GANC	NM_198141	exon18	c.A2142G	p.E714E	.	.	61	4	64	0	.	92
GAPVD1	26130	bcgsc.ca	37	9	128064907	128064907	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GAPVD1	NM_015635	exon3	c.A831G	p.P277P	.	.	71	4	112	0	.	93
GAR1	54433	bcgsc.ca	37	4	110743593	110743593	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GAR1	NM_018983	exon5	c.G520A	p.G174R	.	.	16	3	25	0	.	90
GBP2	2634	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	89573964	89573964	+	Missense_Mutation	SNP	C	C	T	rs200077424		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GBP2	NM_004120	exon11	c.G1670A	p.R557H	.	.	52	20	74	0	C|0.999;T|0.001	91
GCFC2	6936	bcgsc.ca	37	2	75933762	75933762	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001201335	exon2	c.A281G	p.D94G	.	.	77	4	112	0	.	.
GCN1L1	10985	ucsc.edu	37	12	120591563	120591563	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GCN1L1	NM_006836	exon32	c.C3852T	p.L1284L	.	.	46	4	104	0	.	94
GFRA2	2675	ucsc.edu;bcgsc.ca	37	8	21560353	21560353	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001495	exon7	c.G1182A	p.L394L	.	.	63	7	146	1	.	.
GIGYF2	26058	bcgsc.ca	37	2	233655428	233655428	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GIGYF2	NM_001103147	exon12	c.T799C	p.W267R	.	.	81	4	132	0	.	28
GLE1	2733	bcgsc.ca	37	9	131301908	131301908	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GLE1	NM_001499	exon14	c.C1895T	p.A632V	.	.	77	4	89	0	.	22
GNGT2	2793	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	47284179	47284179	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GNGT2	NM_031498	exon4	c.C150T	p.L50L	.	.	160	64	247	0	.	227
GNPTAB	79158	bcgsc.ca	37	12	102174351	102174351	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GNPTAB	NM_024312	exon6	c.T620C	p.V207A	.	.	90	4	142	0	.	92
GNS	2799	bcgsc.ca	37	12	65130872	65130872	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GNS	NM_002076	exon9	c.C1010T	p.P337L	.	.	85	4	118	0	.	514
GPD1	2819	bcgsc.ca	37	12	50500116	50500116	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GPD1	NM_005276	exon4	c.A406G	p.I136V	.	.	70	4	115	0	.	90
GPR112	139378	bcgsc.ca	37	X	135405197	135405197	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GPR112	NM_153834	exon5	c.C331A	p.R111S	.	.	46	4	76	0	.	183
GPR112	139378	bcgsc.ca	37	X	135427539	135427539	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GPR112	NM_153834	exon6	c.T1674C	p.S558S	.	.	76	4	117	0	.	183
GPR114	221188	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	57596061	57596061	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GPR114	NM_153837	exon2	c.C56T	p.A19V	.	.	47	23	68	0	.	90
GPR116	221395	bcgsc.ca	37	6	46832780	46832780	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GPR116	NM_015234	exon14	c.T1989C	p.P663P	.	.	86	4	98	0	.	91
GPR133	283383	bcgsc.ca	37	12	131456003	131456003	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GPR133	NM_198827	exon4	c.A188G	p.D63G	.	.	53	4	81	0	.	191
GPR18	2841	bcgsc.ca	37	13	99907599	99907599	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GPR18	NM_001098200	exon2	c.T528C	p.S176S	.	.	56	4	141	0	.	90
GPR98	84059	bcgsc.ca	37	5	90016810	90016810	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GPR98	NM_032119	exon45	c.A9682G	p.T3228A	.	.	113	6	145	0	.	103
GPRC5A	9052	bcgsc.ca	37	12	13061809	13061809	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GPRC5A	NM_003979	exon2	c.A626G	p.H209R	.	.	124	7	168	0	.	90
GPX6	257202	bcgsc.ca	37	6	28478643	28478643	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GPX6	.	.	.	.	.	.	90	4	90	0	.	95
GREB1	9687	bcgsc.ca	37	2	11755372	11755372	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GREB1	NM_014668	exon20	c.A3278G	p.K1093R	.	.	48	4	99	0	.	91
GREB1L	80000	ucsc.edu;bcgsc.ca	37	18	19020239	19020239	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001142966	exon9	c.T959C	p.F320S	.	.	33	4	51	0	.	.
GRHL3	57822	bcgsc.ca	37	1	24676578	24676578	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GRHL3	NM_021180	exon15	c.A1675G	p.N559D	.	.	77	4	210	0	.	91
GRIK1	2897	bcgsc.ca	37	21	31023534	31023534	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GRIK1	NM_175611	exon6	c.C858T	p.D286D	.	.	78	5	78	0	.	137
GRIP1	23426	bcgsc.ca	37	12	66838509	66838509	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GRIP1	NM_001178074	exon12	c.A1386G	p.R462R	.	.	163	5	193	0	.	494
GRM5	2915	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	88583097	88583097	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GRM5	NM_000842	exon3	c.G888A	p.A296A	.	.	146	78	193	0	.	949
GSTCD	79807	ucsc.edu;bcgsc.ca	37	4	106647833	106647833	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GSTCD	NM_001031720	exon4	c.C992T	p.A331V	.	.	38	4	115	0	.	92
GTF2A1	2957	bcgsc.ca	37	14	81662499	81662499	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GTF2A1	NM_015859	exon6	c.A565G	p.I189V	.	.	51	4	127	0	.	153
GTF2B	2959	bcgsc.ca	37	1	89323029	89323029	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GTF2B	NM_001514	exon6	c.A677G	p.K226R	.	.	84	4	142	0	.	154
GTPBP4	23560	bcgsc.ca	37	10	1058478	1058478	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GTPBP4	NM_012341	exon14	c.A1418G	p.E473G	.	.	123	6	190	0	.	92
GUF1	60558	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	44697656	44697656	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GUF1	NM_021927	exon15	c.A1740T	p.K580N	.	.	63	35	69	0	.	91
GYLTL1B	120071	bcgsc.ca	37	11	45948061	45948061	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	GYLTL1B	NM_152312	exon9	c.C1077T	p.F359F	.	.	49	4	64	0	.	92
HAUS5	23354	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	36106172	36106172	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HAUS5	NM_015302	exon6	c.G369A	p.Q123Q	.	.	42	22	61	0	.	68
HAUS6	54801	bcgsc.ca	37	9	19058995	19058995	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HAUS6	NM_017645	exon16	c.T1770C	p.T590T	.	.	141	7	313	0	.	92
HBZ	3050	bcgsc.ca	37	16	204368	204368	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HBZ	NM_005332	exon3	c.T398C	p.V133A	.	.	57	4	51	0	.	22
HCFC1	3054	bcgsc.ca	37	X	153224790	153224790	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HCFC1	NM_005334	exon9	c.C1597A	p.Q533K	.	.	63	4	74	0	.	132
HEATR5A	25938	bcgsc.ca	37	14	31795433	31795433	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HEATR5A	NM_015473	exon23	c.T3483C	p.S1161S	.	.	79	4	97	0	.	23
HECTD4	283450	bcgsc.ca	37	12	112685290	112685290	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001109662	exon28	c.T3911C	p.L1304P	.	.	90	4	125	0	.	.
HECW2	57520	bcgsc.ca	37	2	197171322	197171322	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HECW2	NM_020760	exon13	c.A2704G	p.N902D	.	.	64	4	43	0	.	668
HELB	92797	bcgsc.ca	37	12	66704358	66704358	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HELB	NM_033647	exon4	c.A1650G	p.K550K	.	.	66	4	75	0	.	515
HELLS	3070	bcgsc.ca	37	10	96350442	96350442	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HELLS	NM_018063	exon15	c.A1676G	p.K559R	.	.	93	4	169	0	.	92
HEPH	9843	bcgsc.ca	37	X	65417649	65417649	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HEPH	NM_138737	exon10	c.T1788C	p.A596A	.	.	86	4	114	0	.	135
HERC5	51191	bcgsc.ca	37	4	89385007	89385007	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HERC5	NM_016323	exon6	c.A782G	p.D261G	.	.	105	5	157	0	.	664
HEXDC	284004	bcgsc.ca	37	17	80377684	80377684	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HEXDC	NM_173620	exon2	c.T9C	p.G3G	.	.	145	5	147	0	.	92
HFE	3077	bcgsc.ca	37	6	26093168	26093168	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HFE	NM_000410	exon4	c.A872G	p.Q291R	.	.	157	5	149	1	.	90
HHLA3	11147	bcgsc.ca	37	1	70833355	70833355	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HHLA3	NM_001031693	exon3	c.A310G	p.T104A	.	.	67	4	99	0	.	90
HIF1AN	55662	bcgsc.ca	37	10	102295817	102295817	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HIF1AN	NM_017902	exon1	c.T102C	p.S34S	.	.	68	4	76	0	.	226
HIF1AN	55662	bcgsc.ca	37	10	102304725	102304725	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HIF1AN	NM_017902	exon4	c.C595T	p.H199Y	.	.	59	4	87	0	.	226
HKDC1	80201	ucsc.edu;bcgsc.ca	37	10	71002998	71002998	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HKDC1	NM_025130	exon7	c.A752G	p.D251G	.	.	38	4	80	0	.	95
HLA-DMB	3109	bcgsc.ca	37	6	32906571	32906571	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HLA-DMB	NM_002118	exon2	c.T227C	p.L76P	.	.	136	5	219	1	.	90
HMGCL	3155	bcgsc.ca	37	1	24137267	24137267	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HMGCL	NM_000191	exon6	c.T520C	p.C174R	.	.	59	4	213	0	.	90
HMGXB3	22993	bcgsc.ca	37	5	149403942	149403942	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HMGXB3	NM_014983	exon7	c.T1159C	p.S387P	.	.	84	4	82	0	.	24
HNF1A	6927	ucsc.edu;bcgsc.ca	37	12	121434085	121434085	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HNF1A	NM_000545	exon5	c.G976T	p.A326S	.	.	28	4	55	0	.	1745
HNRNPUL2	221092	bcgsc.ca	37	11	62490342	62490342	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HNRNPUL2	NM_001079559	exon5	c.A925G	p.T309A	.	.	83	5	114	0	.	22
HOGA1	112817	bcgsc.ca	37	10	99344489	99344489	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HOGA1	NM_138413	exon1	c.T29C	p.V10A	.	.	19	3	38	0	.	90
HOXC4	3221	bcgsc.ca	37	12	54448790	54448790	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HOXC4	NM_014620	exon4	c.A596G	p.Q199R	.	.	76	4	93	0	.	91
HPS3	84343	bcgsc.ca	37	3	148872983	148872983	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HPS3	NM_032383	exon8	c.T1490C	p.V497A	.	.	120	6	129	0	.	158
HPS4	89781	bcgsc.ca	37	22	26873096	26873096	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HPS4	NM_022081	exon4	c.C139T	p.L47L	.	.	77	4	83	0	.	90
HPS5	11234	bcgsc.ca	37	11	18327037	18327037	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HPS5	NM_181507	exon8	c.A828G	p.S276S	.	.	65	4	106	0	.	133
HSDL2	84263	bcgsc.ca	37	9	115166315	115166315	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HSDL2	NM_032303	exon2	c.C58T	p.R20C	.	.	85	5	124	1	.	90
HSF1	3297	bcgsc.ca	37	8	145535805	145535805	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HSF1	NM_005526	exon9	c.A1017G	p.E339E	.	.	63	4	73	0	.	46
HSPA4	3308	bcgsc.ca	37	5	132431925	132431925	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	HSPA4	NM_002154	exon14	c.T1786C	p.L596L	.	.	62	5	70	0	.	226
IARS	3376	ucsc.edu	37	9	95027211	95027211	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IARS	NM_013417	exon16	c.G1700A	p.W567X	.	.	35	4	63	0	.	92
ICAM3	3385	bcgsc.ca	37	19	10444978	10444978	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ICAM3	NM_002162	exon6	c.G1299A	p.L433L	.	.	72	4	131	1	.	131
ICAM4	3386	bcgsc.ca	37	19	10398740	10398740	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ICAM4	NM_001544	exon3	c.C776T	p.A259V	.	.	64	4	77	0	.	130
ICAM5	7087	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	10404831	10404831	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ICAM5	NM_003259	exon8	c.G1827A	p.V609V	.	.	44	22	56	0	.	153
IDH2	3418	bcgsc.ca	37	15	90631949	90631949	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IDH2	NM_002168	exon4	c.C404T	p.P135L	.	.	82	4	151	0	.	15118
IDI1	3422	bcgsc.ca	37	10	1090075	1090075	+	Silent	SNP	A	A	G	rs201845706	alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IDI1	NM_004508	exon2	c.T177C	p.P59P	.	.	167	6	236	1	A|0.999;T|0.001	90
IFT80	57560	broad.mit.edu;bcgsc.ca;mdanderson.org	37	3	159976324	159976324	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IFT80	NM_020800	exon20	c.T2323C	p.L775L	.	.	189	121	292	2	.	522
IGF2BP2	10644	bcgsc.ca	37	3	185375098	185375098	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IGF2BP2	NM_006548	exon12	c.G1362A	p.A454A	.	.	50	4	34	0	.	226
IGSF1	3547	bcgsc.ca	37	X	130420590	130420590	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IGSF1	NM_001555	exon2	c.T59C	p.L20P	.	.	86	4	140	0	.	133
IL12RB1	3594	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;mdanderson.org	37	19	18188364	18188364	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IL12RB1	NM_153701	exon5	c.C511T	p.Q171X	.	.	58	22	71	0	.	91
IL12RB2	3595	bcgsc.ca	37	1	67838370	67838370	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IL12RB2	NM_001559	exon12	c.T1621C	p.W541R	.	.	60	4	75	0	.	92
IL36RN	26525	ucsc.edu;bcgsc.ca	37	2	113820248	113820248	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IL36RN	NM_012275	exon5	c.T462C	p.C154C	.	.	28	4	33	0	.	91
INPP5B	3633	bcgsc.ca	37	1	38409310	38409310	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	INPP5B	NM_005540	exon6	c.280+2T>C	.	.	.	70	4	89	0	.	227
INPP5J	27124	bcgsc.ca	37	22	31529455	31529455	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	INPP5J	NM_001002837	exon11	c.G1291A	p.G431R	.	.	54	4	91	0	.	205
INSR	3643	ucsc.edu;bcgsc.ca	37	19	7126664	7126664	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	INSR	NM_001079817	exon16	c.2910-2A>G	.	.	.	32	4	29	0	.	1381
INTS10	55174	bcgsc.ca	37	8	19688002	19688002	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	INTS10	NM_018142	exon10	c.T1226C	p.V409A	.	.	67	4	130	0	.	91
INTS10	55174	ucsc.edu;bcgsc.ca	37	8	19682425	19682425	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	INTS10	NM_018142	exon8	c.G948A	p.L316L	.	.	43	4	105	0	.	91
INVS	27130	bcgsc.ca	37	9	103054624	103054624	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	INVS	NM_183245	exon14	c.T2085C	p.H695H	.	.	64	4	111	0	.	92
IPP	3652	bcgsc.ca	37	1	46165749	46165749	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IPP	NM_001145349	exon9	c.G1644T	p.L548F	.	.	90	4	68	0	.	91
IQUB	154865	bcgsc.ca	37	7	123143082	123143082	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IQUB	NM_178827	exon5	c.A783G	p.T261T	.	.	52	4	71	0	.	156
IRAK1BP1	134728	bcgsc.ca	37	6	79595093	79595093	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IRAK1BP1	NM_001010844	exon2	c.316-2A>G	.	.	.	87	4	214	1	.	90
ITFG1	81533	bcgsc.ca	37	16	47196465	47196465	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ITFG1	NM_030790	exon15	c.C1564T	p.P522S	.	.	70	4	89	0	.	91
ITGAX	3687	bcgsc.ca	37	16	31383958	31383958	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ITGAX	NM_000887	exon19	c.A2333G	p.Q778R	.	.	91	4	88	0	.	229
ITGB2	3689	bcgsc.ca	37	21	46321519	46321519	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ITGB2	NM_000211	exon6	c.T629C	p.L210P	.	.	88	4	113	0	.	717
ITPR2	3709	ucsc.edu;bcgsc.ca	37	12	26647251	26647251	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ITPR2	NM_002223	exon39	c.A5205G	p.S1735S	.	.	41	4	56	0	.	542
ITSN2	50618	bcgsc.ca	37	2	24432069	24432069	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ITSN2	NM_006277	exon36	c.T4495C	p.L1499L	.	.	69	4	114	0	.	539
IVNS1ABP	10625	bcgsc.ca	37	1	185278298	185278298	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	IVNS1ABP	NM_006469	exon4	c.G118T	p.G40C	.	.	90	4	63	0	.	94
JAKMIP3	282973	bcgsc.ca	37	10	133961468	133961468	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	JAKMIP3	NM_001105521	exon13	c.G1762A	p.E588K	.	.	50	4	106	0	.	23
JMJD1C	221037	bcgsc.ca	37	10	64960265	64960265	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	JMJD1C	NM_032776	exon11	c.A5247G	p.P1749P	.	.	77	4	172	0	.	275
JMY	133746	bcgsc.ca	37	5	78611829	78611829	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	JMY	NM_152405	exon10	c.C2666T	p.S889L	.	.	150	6	187	0	.	227
KALRN	8997	bcgsc.ca	37	3	124385344	124385344	+	Missense_Mutation	SNP	G	G	A	rs201076232		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KALRN	NM_001024660	exon46	c.G6391A	p.V2131M	.	.	89	4	102	0	G|0.999;A|0.001	738
KAT2A	2648	ucsc.edu;bcgsc.ca	37	17	40270418	40270418	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KAT2A	NM_021078	exon7	c.C1077T	p.F359F	.	.	49	4	48	0	.	523
KATNA1	11104	bcgsc.ca	37	6	149953941	149953941	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KATNA1	NM_007044	exon3	c.G274A	p.A92T	.	.	120	5	229	0	.	91
KCNH5	27133	bcgsc.ca	37	14	63447933	63447933	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KCNH5	NM_172375	exon6	c.C599T	p.P200L	.	.	65	4	154	0	.	98
KCNH8	131096	bcgsc.ca	37	3	19556862	19556862	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KCNH8	NM_144633	exon14	c.T2484C	p.T828T	.	.	21	3	35	0	.	524
KCNJ11	3767	bcgsc.ca	37	11	17409252	17409252	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KCNJ11	NM_000525	exon1	c.G387T	p.V129V	.	.	62	4	58	0	.	91
KCNJ15	3772	bcgsc.ca	37	21	39672188	39672188	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KCNJ15	NM_002243	exon4	c.A1005G	p.A335A	.	.	81	4	103	0	.	157
KCNK10	54207	bcgsc.ca	37	14	88652273	88652273	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KCNK10	NM_138318	exon7	c.T1238C	p.F413S	.	.	68	5	102	0	.	95
KCNK15	60598	bcgsc.ca	37	20	43379066	43379066	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KCNK15	NM_022358	exon2	c.T580C	p.F194L	.	.	93	4	89	0	.	90
KCNK5	8645	bcgsc.ca	37	6	39159020	39159020	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KCNK5	NM_003740	exon5	c.A1146G	p.E382E	.	.	70	4	82	0	.	227
KDM1A	23028	bcgsc.ca	37	1	23346419	23346419	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KDM1A	NM_015013	exon1	c.C330T	p.T110T	.	.	27	4	48	0	.	206
KDM4C	23081	bcgsc.ca	37	9	6805752	6805752	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KDM4C	NM_001146696	exon3	c.A364G	p.R122G	.	.	88	4	153	0	.	228
KDM5A	5927	bcgsc.ca	37	12	427285	427285	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KDM5A	NM_001042603	exon19	c.T2884C	p.C962R	.	.	87	4	121	0	.	227
KDR	3791	bcgsc.ca	37	4	55956160	55956160	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KDR	NM_002253	exon23	c.A3155G	p.D1052G	.	.	47	4	63	0	.	2298
KHNYN	23351	bcgsc.ca	37	14	24901234	24901234	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KHNYN	NM_015299	exon3	c.A767G	p.E256G	.	.	100	4	126	0	.	93
KIAA0226	9711	bcgsc.ca	37	3	197422736	197422736	+	Splice_Site	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIAA0226	NM_014687	exon10	c.1473+1G>T	.	.	.	80	4	80	0	.	22
KIAA0232	9778	bcgsc.ca	37	4	6863313	6863313	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIAA0232	NM_014743	exon7	c.T1204C	p.W402R	.	.	25	3	50	0	.	92
KIAA0317	9870	bcgsc.ca	37	14	75130778	75130778	+	Splice_Site	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIAA0317	NM_001039479	exon20	c.2194-1G>T	.	.	.	16	3	33	0	.	525
KIAA0317	9870	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	75140804	75140804	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIAA0317	NM_001039479	exon9	c.T1091A	p.V364E	.	.	50	14	105	0	.	525
KIAA0754	643314	bcgsc.ca	37	1	39878882	39878882	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_015038	exon1	c.A2945G	p.H982R	.	.	69	4	95	0	.	.
KIAA0947	23379	bcgsc.ca	37	5	5465115	5465115	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIAA0947	NM_015325	exon13	c.T5668C	p.S1890P	.	.	83	4	86	0	.	48
KIAA1244	57221	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	138612924	138612924	+	Silent	SNP	G	G	A	rs140287471		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIAA1244	NM_020340	exon19	c.G3102A	p.S1034S	.	.	85	32	135	1	G|1.000;A|0.000	228
KIAA1841	84542	bcgsc.ca	37	2	61304071	61304071	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIAA1841	NM_032506	exon6	c.C448T	p.H150Y	.	.	75	4	152	0	.	90
KIAA2026	158358	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	9	5920263	5920263	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIAA2026	NM_001017969	exon8	c.C5733A	p.L1911L	.	.	53	31	72	0	.	92
KIF13A	63971	bcgsc.ca	37	6	17837779	17837779	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIF13A	NM_001105567	exon10	c.T866C	p.L289P	.	.	82	4	113	0	.	137
KIF13B	23303	ucsc.edu;bcgsc.ca	37	8	28980997	28980997	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIF13B	NM_015254	exon28	c.A3365G	p.D1122G	.	.	16	4	81	0	.	22
KIF20B	9585	bcgsc.ca	37	10	91469737	91469737	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIF20B	NM_016195	exon5	c.A405G	p.Q135Q	.	.	71	4	124	0	.	93
KIF21B	23046	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	200960199	200960199	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIF21B	NM_017596	exon18	c.G2533T	p.D845Y	.	.	171	47	121	0	.	96
KIF22	3835	broad.mit.edu;ucsc.edu;mdanderson.org	37	16	29816332	29816332	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIF22	NM_007317	exon12	c.C1875A	p.H625Q	.	.	16	6	15	0	.	68
KIF24	347240	bcgsc.ca	37	9	34257952	34257952	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	C9orf48,NS,carcinoma,0	KIF24	NM_194313	exon11	c.G1653A	p.K551K	.	.	65	4	157	0	.	22
KIF5C	3800	bcgsc.ca	37	2	149806835	149806835	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIF5C	NM_004522	exon10	c.A827G	p.H276R	.	.	51	4	118	1	.	69
KIF6	221458	bcgsc.ca	37	6	39688495	39688495	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIF6	NM_145027	exon2	c.A159G	p.R53R	.	.	78	4	70	0	.	713
KIFC2	90990	bcgsc.ca	37	8	145693997	145693997	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KIFC2	NM_145754	exon9	c.A967G	p.R323G	.	.	82	4	92	0	.	92
KLHL14	57565	bcgsc.ca	37	18	30349617	30349617	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KLHL14	NM_020805	exon2	c.T938C	p.L313P	.	.	139	6	150	0	.	91
KLHL23	151230	bcgsc.ca	37	2	170592686	170592686	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KLHL23	NM_144711	exon2	c.T1162C	p.F388L	.	.	55	4	44	0	.	90
KLHL34	257240	bcgsc.ca	37	X	21674334	21674334	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KLHL34	NM_153270	exon1	c.C1573T	p.R525C	.	.	66	4	80	0	.	131
KLK1	3816	bcgsc.ca	37	19	51323218	51323218	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KLK1	NM_002257	exon4	c.C570T	p.V190V	.	.	160	6	195	0	.	226
KNTC1	9735	bcgsc.ca	37	12	123087579	123087579	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KNTC1	NM_014708	exon48	c.T4890C	p.S1630S	.	.	49	4	76	0	.	543
KRTAP5-1	387264	broad.mit.edu;bcgsc.ca;mdanderson.org	37	11	1606219	1606219	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	KRTAP5-1	NM_001005922	exon1	c.G261T	p.G87G	.	.	159	54	168	1	.	44
KRTAP7-1	337878	bcgsc.ca	37	21	32201897	32201897	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_181606	exon2	c.G120A	p.L40L	.	.	88	4	112	0	.	.
LAMA5	3911	bcgsc.ca	37	20	60885340	60885340	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LAMA5	NM_005560	exon77	c.T10628C	p.V3543A	.	.	65	5	33	0	.	93
LAMA5	3911	bcgsc.ca	37	20	60907456	60907456	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LAMA5	NM_005560	exon28	c.T3524C	p.L1175P	.	.	170	7	136	0	.	93
LAMTOR3	8649	bcgsc.ca	37	4	100806765	100806765	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LAMTOR3	NM_021970	exon5	c.A171G	p.T57T	.	.	83	4	212	2	.	658
LBX1	10660	bcgsc.ca	37	10	102987415	102987415	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LBX1	NM_006562	exon2	c.C458T	p.A153V	.	.	81	5	133	0	.	90
LDHD	197257	bcgsc.ca	37	16	75147495	75147495	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LDHD	NM_153486	exon8	c.C1093A	p.R365R	.	.	80	4	78	0	.	90
LIG3	3980	bcgsc.ca	37	17	33331476	33331476	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LIG3	NM_013975	exon20	c.A2981G	p.E994G	.	.	57	4	65	0	.	728
LIMK2	3985	bcgsc.ca	37	22	31669477	31669477	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LIMK2	NM_005569	exon14	c.G1598T	p.G533V	.	.	73	4	92	0	.	548
LIN28A	79727	bcgsc.ca	37	1	26751794	26751794	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LIN28A	NM_024674	exon3	c.A229G	p.S77G	.	.	73	4	179	2	.	226
LIN28B	389421	ucsc.edu;bcgsc.ca	37	6	105526351	105526351	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LIN28B	NM_001004317	exon4	c.A446G	p.K149R	.	.	27	4	61	0	.	90
LINC00521	256369	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	94467500	94467500	+	RNA	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	.	.	.	.	.	.	41	32	89	0	.	.
LIPE	3991	bcgsc.ca	37	19	42930764	42930764	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LIPE	NM_005357	exon1	c.A538G	p.T180A	.	.	192	6	245	0	.	154
LLGL1	3996	bcgsc.ca	37	17	18136109	18136109	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LLGL1	NM_004140	exon4	c.G385A	p.G129S	.	.	14	3	70	0	.	229
LPA	4018	bcgsc.ca	37	6	161026213	161026213	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LPA	NM_005577	exon19	c.T2810C	p.V937A	.	.	51	4	65	0	.	74
LPAR3	23566	bcgsc.ca	37	1	85279735	85279735	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LPAR3	NM_012152	exon3	c.T856C	p.S286P	.	.	100	5	105	0	.	502
LPCAT2	54947	bcgsc.ca	37	16	55584988	55584988	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LPCAT2	NM_017839	exon11	c.A1189G	p.R397G	.	.	60	4	103	0	.	90
LPCAT4	254531	bcgsc.ca	37	15	34657864	34657864	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LPCAT4	NM_153613	exon2	c.G153T	p.V51V	.	.	52	4	151	1	.	90
LPHN3	23284	bcgsc.ca	37	4	62903494	62903494	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LPHN3	NM_015236	exon21	c.G3433A	p.G1145S	.	.	115	5	108	0	.	508
LPP	4026	bcgsc.ca	37	3	188592253	188592253	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LPP	NM_005578	exon11	c.A1825G	p.S609G	.	.	67	4	57	0	.	659
LRBA	987	bcgsc.ca	37	4	151356787	151356787	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LRBA	NM_006726	exon47	c.T7028C	p.I2343T	.	.	119	5	135	0	.	157
LRBA	987	bcgsc.ca	37	4	151388922	151388922	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LRBA	NM_006726	exon45	c.A6716G	p.D2239G	.	.	138	5	211	1	.	157
LRCH2	57631	bcgsc.ca	37	X	114422916	114422916	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LRCH2	NM_001243963	exon2	c.T367C	p.F123L	.	.	87	4	150	0	.	131
LRP1	4035	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	12	57556190	57556190	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LRP1	NM_002332	exon14	c.G2293T	p.V765F	.	.	72	30	105	0	.	596
LRP1B	53353	bcgsc.ca	37	2	141474353	141474353	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LRP1B	NM_018557	exon36	c.T5791C	p.F1931L	.	.	159	5	184	1	.	311
LRRC36	55282	bcgsc.ca	37	16	67397549	67397549	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LRRC36	NM_018296	exon6	c.A634G	p.S212G	.	.	85	5	99	0	.	90
LRRC4C	57689	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	40137651	40137651	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LRRC4C	NM_001258419	exon7	c.G192A	p.R64R	.	.	92	39	97	0	.	521
LRRCC1	85444	bcgsc.ca	37	8	86050442	86050442	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LRRCC1	NM_033402	exon16	c.A2666G	p.K889R	.	.	153	6	196	1	.	90
LRRIQ1	84125	bcgsc.ca	37	12	85554455	85554455	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LRRIQ1	NM_001079910	exon24	c.A4785G	p.P1595P	.	.	96	4	135	0	.	95
LRRK1	79705	bcgsc.ca	37	15	101595217	101595217	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LRRK1	NM_024652	exon27	c.T4121C	p.L1374P	.	.	83	4	137	0	.	602
LRRK2	120892	ucsc.edu;bcgsc.ca	37	12	40619068	40619068	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LRRK2	NM_198578	exon1	c.C135A	p.F45L	.	.	25	4	59	0	.	533
LRRN3	54674	ucsc.edu;bcgsc.ca	37	7	110763773	110763773	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LRRN3	NM_018334	exon2	c.A945G	p.E315E	.	.	40	4	56	0	.	154
LSG1	55341	bcgsc.ca	37	3	194386320	194386320	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LSG1	NM_018385	exon5	c.T487C	p.F163L	.	.	131	5	117	0	.	90
LSM14B	149986	bcgsc.ca	37	20	60706512	60706512	+	Silent	SNP	T	T	C	rs185130682		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LSM14B	NM_144703	exon7	c.T936C	p.Y312Y	.	.	75	4	38	0	T|0.999;C|0.000	22
LTA	4049	ucsc.edu;bcgsc.ca	37	6	31540523	31540523	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LTA	NM_001159740	exon2	c.A4G	p.T2A	.	.	48	4	40	0	.	522
LTA4H	4048	bcgsc.ca	37	12	96412585	96412585	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LTA4H	NM_000895	exon8	c.G808A	p.G270S	.	.	73	4	96	0	.	91
LUZP1	7798	bcgsc.ca	37	1	23420376	23420376	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	LUZP1	NM_033631	exon4	c.T379C	p.F127L	.	.	51	4	103	0	.	90
MAB21L1	4081	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	13	36049572	36049572	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAB21L1	NM_005584	exon1	c.C704T	p.A235V	.	.	21	18	52	0	.	92
MAD1L1	8379	bcgsc.ca	37	7	2054140	2054140	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAD1L1	NM_003550	exon13	c.G1356A	p.M452I	.	.	49	4	31	0	.	1083
MAGEA11	4110	bcgsc.ca	37	X	148797833	148797833	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAGEA11	NM_005366	exon5	c.G687A	p.L229L	.	.	57	4	77	0	.	132
MAGED1	9500	bcgsc.ca	37	X	51638404	51638404	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAGED1	NM_001005333	exon4	c.A469G	p.K157E	.	.	72	5	96	0	.	133
MAGEL2	54551	bcgsc.ca	37	15	23891051	23891051	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_019066	exon1	c.G1839C	p.Q613H	.	.	63	4	109	0	.	.
MAOA	4128	bcgsc.ca	37	X	43592020	43592020	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAOA	NM_000240	exon9	c.G1030C	p.G344R	.	.	50	4	44	0	.	194
MAP1A	4130	bcgsc.ca	37	15	43819542	43819542	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAP1A	NM_002373	exon4	c.A5871G	p.T1957T	.	.	109	5	112	0	.	141
MAP4K3	8491	bcgsc.ca	37	2	39494339	39494339	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAP4K3	NM_003618	exon27	c.T2023C	p.C675R	.	.	55	4	101	0	.	550
MAP7	9053	ucsc.edu;bcgsc.ca	37	6	136682317	136682317	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAP7	NM_001198609	exon12	c.A1617G	p.R539R	.	.	13	4	20	0	.	90
MAP9	79884	bcgsc.ca	37	4	156276888	156276888	+	Missense_Mutation	SNP	T	T	C	rs139408083	byfrequency	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAP9	NM_001039580	exon9	c.A1270G	p.I424V	.	.	212	6	347	0	T|0.999;C|0.001	91
MAPK9	5601	bcgsc.ca	37	5	179669617	179669617	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAPK9	NM_002752	exon8	c.C827A	p.P276Q	.	.	142	5	172	0	.	1402
MAPKAPK3	7867	bcgsc.ca	37	3	50681923	50681923	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAPKAPK3	NM_004635	exon6	c.A588G	p.Q196Q	.	.	84	4	88	0	.	1423
MAPRE3	22924	bcgsc.ca	37	2	27246978	27246978	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAPRE3	NM_012326	exon4	c.G282A	p.E94E	.	.	50	4	92	0	.	91
MARCH5	54708	bcgsc.ca	37	10	94110894	94110894	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MARCH5	NM_017824	exon6	c.T767C	p.F256S	.	.	127	5	221	0	.	226
MAST4	375449	bcgsc.ca	37	5	66459644	66459644	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAST4	NM_001164664	exon29	c.A4637G	p.E1546G	.	.	67	4	74	0	.	647
MAT1A	4143	ucsc.edu	37	10	82034306	82034306	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAT1A	NM_000429	exon8	c.A1055G	p.N352S	.	.	46	4	71	0	.	90
MAT2A	4144	bcgsc.ca	37	2	85766462	85766462	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAT2A	NM_005911	exon1	c.T52C	p.F18L	.	.	76	5	135	0	.	90
MAT2A	4144	bcgsc.ca	37	2	85768764	85768764	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAT2A	NM_005911	exon4	c.T301C	p.Y101H	.	.	87	4	170	0	.	90
MAT2B	27430	bcgsc.ca	37	5	162939147	162939147	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAT2B	NM_013283	exon2	c.A203G	p.E68G	.	.	95	4	131	0	.	91
MAU2	23383	bcgsc.ca	37	19	19455686	19455686	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MAU2	NM_015329	exon11	c.A1106G	p.Q369R	.	.	54	4	61	0	.	91
MBD4	8930	broad.mit.edu	37	3	129155787	129155787	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MBD4	NM_003925	exon3	c.A700G	p.K234E	.	.	107	4	160	0	.	228
MBD5	55777	bcgsc.ca	37	2	149227651	149227651	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MBD5	NM_018328	exon9	c.T2139C	p.S713S	.	.	147	6	237	0	.	95
MCM4	4173	bcgsc.ca	37	8	48875359	48875359	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MCM4	NM_182746	exon6	c.A537G	p.K179K	.	.	225	6	231	1	.	230
MCTP1	79772	broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	94275895	94275895	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MCTP1	NM_024717	exon5	c.A1066G	p.T356A	.	.	16	6	53	0	.	92
MDH2	4191	broad.mit.edu	37	7	75693751	75693751	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MDH2	NM_005918	exon7	c.G728A	p.G243E	.	.	66	7	74	0	.	228
MDM1	56890	bcgsc.ca	37	12	68724930	68724930	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MDM1	NM_020128	exon2	c.G90A	p.V30V	.	.	52	4	78	0	.	95
MED13L	23389	bcgsc.ca	37	12	116424281	116424281	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MED13L	NM_015335	exon19	c.T4128C	p.S1376S	.	.	56	4	52	0	.	232
MED21	9412	bcgsc.ca	37	12	27180321	27180321	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MED21	NM_004264	exon3	c.A199G	p.K67E	.	.	90	4	113	0	.	227
MEGF11	84465	bcgsc.ca	37	15	66206238	66206238	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MEGF11	NM_032445	exon20	c.G2547A	p.V849V	.	.	87	4	112	0	.	69
MFSD2B	388931	bcgsc.ca	37	2	24244814	24244814	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MFSD2B	NM_001080473	exon8	c.T868C	p.F290L	.	.	65	4	108	0	.	24
MIR143HG	728264	ucsc.edu	37	5	148808462	148808462	+	RNA	SNP	A	A	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	.	.	.	.	.	.	38	4	54	0	.	.
MKL1	57591	bcgsc.ca	37	22	40820253	40820253	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MKL1	NM_020831	exon8	c.T434C	p.V145A	.	.	65	5	88	0	.	948
MKL1	57591	ucsc.edu;bcgsc.ca	37	22	40807623	40807623	+	Missense_Mutation	SNP	T	T	C	rs28661556	alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MKL1	NM_020831	exon15	c.A2567G	p.H856R	.	.	41	4	43	0	.	948
MLL2	8085	bcgsc.ca	37	12	49431408	49431408	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MLL2	NM_003482	exon34	c.A9731G	p.E3244G	.	.	71	4	105	0	.	612
MLL	4297	bcgsc.ca	37	11	118344512	118344512	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MLL	NM_001197104	exon3	c.A2638G	p.R880G	.	.	68	4	74	0	.	1255
MLL4	8085	bcgsc.ca	37	19	36209221	36209221	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MLL4	NM_014727	exon1	c.T301C	p.W101R	.	.	38	4	34	0	.	697
MLL5	55904	bcgsc.ca	37	7	104702650	104702650	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MLL5	NM_018682	exon3	c.A111G	p.K37K	.	.	86	4	159	0	.	93
MLLT4	4301	bcgsc.ca	37	6	168312117	168312117	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MLLT4	NM_001040000	exon15	c.A1985G	p.K662R	.	.	53	4	100	0	.	685
MOCOS	55034	bcgsc.ca	37	18	33795823	33795823	+	Silent	SNP	C	C	G	rs201533018	alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MOCOS	NM_017947	exon8	c.C1680G	p.V560V	.	.	50	4	59	0	C|0.999;T|0.000	91
MORC4	79710	bcgsc.ca	37	X	106228384	106228384	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MORC4	NM_001085354	exon5	c.C616A	p.Q206K	.	.	80	4	93	0	.	131
MORN1	79906	bcgsc.ca	37	1	2290036	2290036	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MORN1	NM_024848	exon9	c.C864T	p.T288T	.	.	69	4	163	0	.	92
MROH7	374977	bcgsc.ca	37	1	55166119	55166119	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001039464	exon18	c.C3090T	p.A1030A	.	.	55	4	61	0	.	.
MRPL1	65008	bcgsc.ca	37	4	78806452	78806452	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MRPL1	NM_020236	exon4	c.C445T	p.P149S	.	.	96	5	112	0	.	90
MRPL20	55052	bcgsc.ca	37	1	1337546	1337546	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MRPL20	NM_017971	exon4	c.A367G	p.R123G	.	.	22	4	69	0	.	22
MRPL22	29093	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	5	154346429	154346429	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MRPL22	NM_014180	exon7	c.G593A	p.R198H	.	.	63	33	49	0	.	90
MSH5	4439	broad.mit.edu;ucsc.edu	37	6	31729292	31729292	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MSH5	NM_025259	exon22	c.T2135C	p.L712P	.	.	26	4	62	1	.	661
MSH5	4439	bcgsc.ca	37	6	31712008	31712008	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MSH5	NM_025259	exon7	c.A630G	p.R210R	.	.	72	5	104	0	.	661
MSS51	118490	bcgsc.ca	37	10	75187968	75187968	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001024593	exon2	c.C75T	p.T25T	.	.	78	4	106	0	.	.
MTF2	22823	bcgsc.ca	37	1	93580544	93580544	+	Splice_Site	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MTF2	NM_001164391	exon6	c.77-1G>T	.	.	.	84	4	116	0	.	92
MTHFD1	4522	bcgsc.ca	37	14	64855174	64855174	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MTHFD1	NM_005956	exon1	c.A29G	p.K10R	.	.	85	4	167	0	.	92
MTUS2	23281	bcgsc.ca	37	13	29598939	29598939	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MTUS2	NM_001033602	exon1	c.C134A	p.T45K	.	.	49	4	84	0	.	218
MTX3	345778	bcgsc.ca	37	5	79284332	79284332	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001010891	exon5	c.A457G	p.T153A	.	.	106	5	128	0	.	.
MUC16	94025	bcgsc.ca	37	19	9017008	9017008	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MUC16	NM_024690	exon27	c.C37987T	p.H12663Y	.	.	153	7	207	0	.	566
MUC4	4585	bcgsc.ca	37	3	195479931	195479931	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MUC4	NM_018406	exon20	c.G15499A	p.V5167I	.	.	98	4	105	0	.	90
MYBL1	4603	bcgsc.ca	37	8	67492580	67492580	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MYBL1	NM_001080416	exon9	c.T889C	p.W297R	.	.	67	4	60	0	.	395
MYH10	4628	bcgsc.ca	37	17	8413129	8413129	+	Splice_Site	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MYH10	NM_005964	exon24	c.2997+1G>A	.	.	.	73	4	130	0	.	92
MYH15	22989	bcgsc.ca	37	3	108189579	108189579	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MYH15	NM_014981	exon14	c.G1409A	p.G470D	.	.	77	5	80	0	.	73
MYLK3	91807	bcgsc.ca	37	16	46746632	46746632	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MYLK3	NM_182493	exon10	c.C2042A	p.P681Q	.	.	81	4	147	0	.	374
MYO15A	51168	bcgsc.ca	37	17	18034807	18034807	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MYO15A	NM_016239	exon9	c.T4168C	p.S1390P	.	.	22	3	59	0	.	97
MYO1H	283446	bcgsc.ca	37	12	109834265	109834265	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001101421	exon3	c.A319G	p.S107G	.	.	60	4	71	0	.	.
MYO5A	4644	broad.mit.edu;bcgsc.ca	37	15	52656807	52656807	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MYO5A	NM_000259	exon24	c.T3253C	p.F1085L	.	.	130	6	199	0	.	93
MYO9B	4650	ucsc.edu;bcgsc.ca	37	19	17212654	17212654	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MYO9B	NM_001130065	exon2	c.A127G	p.T43A	.	.	48	4	59	1	.	67
MYOCD	93649	bcgsc.ca	37	17	12618881	12618881	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MYOCD	NM_001146312	exon3	c.A167G	p.D56G	.	.	47	4	78	0	.	93
MYOCD	93649	bcgsc.ca	37	17	12666956	12666956	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MYOCD	NM_001146312	exon14	c.T2956C	p.W986R	.	.	61	4	186	1	.	93
MYRIP	25924	bcgsc.ca	37	3	40231486	40231486	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	MYRIP	NM_015460	exon10	c.A1197G	p.E399E	.	.	92	5	95	0	.	94
NAALAD2	10003	bcgsc.ca	37	11	89909230	89909230	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NAALAD2	NM_005467	exon15	c.G1593T	p.K531N	.	.	54	5	56	0	.	92
NAPB	63908	bcgsc.ca	37	20	23361923	23361923	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NAPB	NM_022080	exon8	c.T593C	p.L198S	.	.	65	4	76	0	.	91
NARG2	79664	bcgsc.ca	37	15	60760349	60760349	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NARG2	NM_024611	exon4	c.A319G	p.S107G	.	.	107	6	162	0	.	227
NARS2	79731	bcgsc.ca	37	11	78176966	78176966	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NARS2	NM_024678	exon11	c.A1120G	p.K374E	.	.	142	5	213	0	.	92
NAV2	89797	bcgsc.ca	37	11	20075656	20075656	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NAV2	NM_001244963	exon19	c.A4581G	p.Q1527Q	.	.	46	4	55	0	.	96
NBAS	51594	bcgsc.ca	37	2	15417111	15417111	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NBAS	NM_015909	exon43	c.T5253C	p.I1751I	.	.	81	4	131	0	.	94
NBEAL2	23218	bcgsc.ca	37	3	47046509	47046509	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NBEAL2	NM_015175	exon39	c.C6342T	p.S2114S	.	.	66	4	87	0	.	69
NBEAL2	23218	ucsc.edu	37	3	47043988	47043988	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NBEAL2	NM_015175	exon32	c.C5279T	p.A1760V	.	.	39	4	30	0	.	69
NCK1	4690	bcgsc.ca	37	3	136664950	136664950	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NCK1	NM_006153	exon3	c.A752G	p.Q251R	.	.	73	4	116	0	.	847
NCKAP1L	3071	bcgsc.ca	37	12	54910075	54910075	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NCKAP1L	NM_005337	exon10	c.A994G	p.N332D	.	.	74	5	83	0	.	93
ND2	0	bcgsc.ca	37	MT	4997	4997	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	ENST00000361453	exon1	c.C528A	p.R176R	.	.	86	4	497	0	.	.
ND3	0	bcgsc.ca	37	MT	10385	10385	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	ENST00000361227	exon1	c.A327G	p.K109K	.	.	77	4	446	2	.	.
NDC80	10403	bcgsc.ca	37	18	2587866	2587866	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NDC80	NM_006101	exon8	c.T707C	p.F236S	.	.	93	4	105	0	.	91
NDUFS4	4724	bcgsc.ca	37	5	52899282	52899282	+	Silent	SNP	G	G	A	rs200926524	alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NDUFS4	NM_002495	exon2	c.G99A	p.R33R	.	.	73	4	111	1	G|0.999;T|0.000	90
NEB	4703	bcgsc.ca	37	2	152420222	152420222	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NEB	NM_001271208	exon119	c.A18591G	p.K6197K	.	.	77	4	128	0	.	145
NEBL	10529	bcgsc.ca	37	10	21169776	21169776	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NEBL	NM_006393	exon5	c.A427G	p.K143E	.	.	92	4	144	0	.	92
NELFE	7936	bcgsc.ca	37	6	31922176	31922176	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_002904	exon8	c.T786C	p.N262N	.	.	74	4	150	0	.	.
NEURL4	84461	bcgsc.ca	37	17	7221410	7221410	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NEURL4	NM_032442	exon25	c.G4034T	p.R1345L	.	.	61	4	128	2	.	46
NFKBID	84807	bcgsc.ca	37	19	36386977	36386977	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NFKBID	NM_139239	exon9	c.T511C	p.S171P	.	.	57	4	58	0	.	90
NFRKB	4798	bcgsc.ca	37	11	129751709	129751709	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NFRKB	NM_006165	exon10	c.A1306G	p.S436G	.	.	62	5	74	0	.	93
NFYA	4800	bcgsc.ca	37	6	41060709	41060709	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NFYA	NM_002505	exon8	c.A773G	p.E258G	.	.	124	5	110	0	.	226
NGDN	25983	bcgsc.ca	37	14	23946731	23946731	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NGDN	NM_015514	exon10	c.A890G	p.K297R	.	.	59	4	96	0	.	68
NHLRC1	378884	bcgsc.ca	37	6	18121789	18121789	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NHLRC1	NM_198586	exon1	c.A1049G	p.E350G	.	.	66	5	83	0	.	90
NHS	4810	ucsc.edu;bcgsc.ca	37	X	17744747	17744747	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NHS	NM_198270	exon6	c.T2458C	p.S820P	.	.	43	4	41	0	.	197
NHSL2	340527	bcgsc.ca	37	X	71359871	71359871	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NHSL2	NM_001013627	exon6	c.C2473A	p.Q825K	.	.	59	4	71	0	.	108
NIPBL	25836	bcgsc.ca	37	5	37000588	37000588	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NIPBL	NM_015384	exon12	c.A3418G	p.S1140G	.	.	89	5	127	0	.	293
NIT1	4817	bcgsc.ca	37	1	161090383	161090383	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NIT1	NM_005600	exon7	c.A812G	p.H271R	.	.	83	5	46	0	.	90
NKX1-2	390010	bcgsc.ca	37	10	126136262	126136262	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001146340	exon2	c.G669A	p.P223P	.	.	44	4	73	0	.	.
NLK	51701	bcgsc.ca	37	17	26519219	26519219	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NLK	NM_016231	exon10	c.T1509C	p.A503A	.	.	81	4	121	0	.	1403
NLN	57486	bcgsc.ca	37	5	65118671	65118671	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NLN	NM_020726	exon13	c.G2043T	p.M681I	.	.	73	4	91	0	.	90
NLRP11	204801	bcgsc.ca	37	19	56321162	56321162	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NLRP11	NM_145007	exon5	c.T814C	p.W272R	.	.	71	4	63	0	.	169
NLRP12	91662	bcgsc.ca	37	19	54313956	54313956	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NLRP12	NM_144687	exon3	c.G957T	p.L319L	.	.	23	3	52	0	.	211
NLRP13	126204	bcgsc.ca	37	19	56443671	56443671	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NLRP13	NM_176810	exon1	c.T7C	p.F3L	.	.	67	4	87	0	.	211
NLRP3	114548	bcgsc.ca	37	1	247582228	247582228	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NLRP3	NM_183395	exon1	c.T132C	p.G44G	.	.	64	4	47	0	.	674
NME4	4833	bcgsc.ca	37	16	449663	449663	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NME4	NM_005009	exon4	c.G364A	p.A122T	.	.	59	4	89	0	.	115
NMI	9111	bcgsc.ca	37	2	152132144	152132144	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NMI	NM_004688	exon6	c.A488G	p.E163G	.	.	86	4	142	0	.	90
NMS	129521	bcgsc.ca	37	2	101087012	101087012	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NMS	NM_001011717	exon1	c.A62G	p.Q21R	.	.	68	4	99	0	.	91
NOP14-AS1	317648	ucsc.edu	37	4	2940485	2940485	+	RNA	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	.	.	.	.	.	.	59	1	75	0	.	.
NOS1	4842	bcgsc.ca	37	12	117768518	117768518	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NOS1	NM_000620	exon2	c.C357T	p.T119T	.	.	51	4	79	0	.	154
NOTCH4	4855	bcgsc.ca	37	6	32190426	32190426	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NOTCH4	NM_004557	exon3	c.T313C	p.C105R	.	.	79	5	124	0	.	1321
NOTCH4	4855	ucsc.edu;bcgsc.ca	37	6	32169089	32169089	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NOTCH4	NM_004557	exon22	c.T3944C	p.L1315P	.	.	43	4	85	0	.	1321
NOTCH4	4855	ucsc.edu;bcgsc.ca	37	6	32183154	32183154	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NOTCH4	NM_004557	exon12	c.T1870C	p.C624R	.	.	45	4	92	0	.	1321
NPAT	4863	bcgsc.ca	37	11	108043497	108043497	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NPAT	NM_002519	exon13	c.C2214A	p.V738V	.	.	87	4	92	0	.	117
NPC1L1	29881	bcgsc.ca	37	7	44556358	44556358	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NPC1L1	NM_013389	exon17	c.T3544C	p.F1182L	.	.	78	4	92	0	.	94
NPHP3	27031	bcgsc.ca	37	3	132435649	132435649	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NPHP3	NM_153240	exon4	c.G775T	p.A259S	.	.	63	4	80	0	.	91
NR3C2	4306	bcgsc.ca	37	4	149075742	149075742	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NR3C2	NM_000901	exon5	c.A2325G	p.K775K	.	.	233	7	294	0	.	154
NR3C2	4306	bcgsc.ca	37	4	149357127	149357127	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NR3C2	NM_001166104	exon2	c.T886C	p.S296P	.	.	74	4	108	0	.	154
NRCAM	4897	bcgsc.ca	37	7	107832188	107832188	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NRCAM	NM_001037132	exon15	c.G1888A	p.V630M	.	.	79	4	85	0	.	156
NUCB2	4925	bcgsc.ca	37	11	17333474	17333474	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NUCB2	NM_005013	exon9	c.A816G	p.K272K	.	.	96	4	209	0	.	90
NUDT21	11051	ucsc.edu;bcgsc.ca	37	16	56481870	56481870	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NUDT21	NM_007006	exon2	c.A148G	p.K50E	.	.	43	4	107	0	.	90
NUDT22	84304	bcgsc.ca	37	11	63994533	63994533	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NUDT22	NM_001128613	exon2	c.C409T	p.L137L	.	.	23	3	29	0	.	90
NUP153	9972	bcgsc.ca	37	6	17675840	17675840	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NUP153	NM_005124	exon3	c.G496A	p.V166I	.	.	91	4	112	0	.	637
NUP153	9972	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	17640200	17640200	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NUP153	NM_005124	exon15	c.G1816C	p.G606R	.	.	78	24	92	0	.	637
NUP210	23225	bcgsc.ca	37	3	13372105	13372105	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NUP210	NM_024923	exon30	c.T3965C	p.V1322A	.	.	55	4	81	0	.	256
NXF3	56000	bcgsc.ca	37	X	102334169	102334169	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NXF3	NM_022052	exon16	c.T1358C	p.V453A	.	.	222	7	345	0	.	205
NXF3	56000	bcgsc.ca	37	X	102348040	102348040	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NXF3	.	.	.	.	.	.	11	11	23	0	.	205
NYNRIN	57523	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	14	24884257	24884257	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	NYNRIN	NM_025081	exon9	c.T3302C	p.M1101T	.	.	76	27	89	0	.	3
OAS3	4940	bcgsc.ca	37	12	113399005	113399005	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OAS3	NM_006187	exon8	c.T1787C	p.V596A	.	.	63	4	69	0	.	1
OAS3	4940	bcgsc.ca	37	12	113400706	113400706	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OAS3	NM_006187	exon9	c.A2083G	p.R695G	.	.	76	4	121	0	.	1
OBP2B	29989	bcgsc.ca	37	9	136081717	136081717	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OBP2B	NM_014581	exon5	c.A475G	p.T159A	.	.	57	4	94	0	.	68
OBSCN	84033	bcgsc.ca	37	1	228563761	228563761	+	Silent	SNP	C	C	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OBSCN	NM_001271223	exon110	c.C25710G	p.T8570T	.	.	79	4	113	0	.	403
OR11L1	391189	broad.mit.edu;bcgsc.ca	37	1	248004537	248004537	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR11L1	NM_001001959	exon1	c.T662C	p.I221T	.	.	115	6	150	0	.	71
OR13C4	138804	bcgsc.ca	37	9	107288589	107288589	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR13C4	NM_001001919	exon1	c.A902G	p.K301R	.	.	81	4	105	0	.	69
OR13J1	392309	ucsc.edu;bcgsc.ca	37	9	35869605	35869605	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR13J1	NM_001004487	exon1	c.A794G	p.K265R	.	.	35	4	52	0	.	68
OR1J2	26740	bcgsc.ca	37	9	125273536	125273536	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR1J2	NM_054107	exon1	c.T456C	p.S152S	.	.	270	7	460	2	.	72
OR2J3	442186	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	29080221	29080221	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR2J3	NM_001005216	exon1	c.C554A	p.P185Q	.	.	301	85	328	0	.	90
OR2M1P	388762	bcgsc.ca	37	1	248286062	248286062	+	RNA	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR2M1P	.	.	.	.	.	.	148	6	212	0	.	46
OR4D2	124538	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	17	56247344	56247344	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR4D2	NM_001004707	exon1	c.G328T	p.A110S	.	.	56	15	103	0	.	114
OR4X1	390113	bcgsc.ca	37	11	48285597	48285597	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR4X1	NM_001004726	exon1	c.G185T	p.S62I	.	.	181	7	233	0	.	71
OR51A7	119687	bcgsc.ca	37	11	4928860	4928860	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR51A7	NM_001004749	exon1	c.C261T	p.F87F	.	.	117	5	152	0	.	70
OR51G1	79324	bcgsc.ca	37	11	4945451	4945451	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR51G1	NM_001005237	exon1	c.T119C	p.V40A	.	.	70	4	80	0	.	70
OR51I2	390064	bcgsc.ca	37	11	5474638	5474638	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR51I2	.	.	.	.	.	.	29	4	41	0	.	72
OR52W1	120787	bcgsc.ca	37	11	6220919	6220919	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR52W1	NM_001005178	exon1	c.A466G	p.K156E	.	.	127	5	134	0	.	68
OR5D14	219436	bcgsc.ca	37	11	55563350	55563350	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR5D14	NM_001004735	exon1	c.T319C	p.C107R	.	.	173	5	285	0	.	70
OR6C74	254783	bcgsc.ca	37	12	55641940	55641940	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR6C74	NM_001005490	exon1	c.T869C	p.L290P	.	.	63	4	92	0	.	68
OR6T1	219874	bcgsc.ca	37	11	123813939	123813939	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR6T1	NM_001005187	exon1	c.T607C	p.S203P	.	.	65	4	91	0	.	69
OR7D4	125958	bcgsc.ca	37	19	9324607	9324607	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR7D4	NM_001005191	exon1	c.A907G	p.R303G	.	.	61	4	83	0	.	71
OR7G2	390882	bcgsc.ca	37	19	9213430	9213430	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR7G2	NM_001005193	exon1	c.T553C	p.L185L	.	.	75	4	115	0	.	69
OR8U1	219417	bcgsc.ca	37	11	56143122	56143122	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OR8U1	NM_001005204	exon1	c.A23G	p.Q8R	.	.	66	4	103	0	.	72
OSBPL10	114884	bcgsc.ca	37	3	31917987	31917987	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OSBPL10	NM_017784	exon3	c.A475G	p.K159E	.	.	78	4	146	0	.	69
OSBPL1A	114876	bcgsc.ca	37	18	21912917	21912917	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OSBPL1A	NM_080597	exon7	c.A614G	p.K205R	.	.	87	4	135	0	.	94
OSCP1	127700	bcgsc.ca	37	1	36904485	36904485	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OSCP1	NM_145047	exon2	c.T139C	p.F47L	.	.	66	4	96	0	.	4
OTUD3	23252	ucsc.edu;bcgsc.ca	37	1	20234091	20234091	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_015207	exon8	c.A1049G	p.Q350R	.	.	22	5	55	1	.	.
OTX1	5013	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	2	63282697	63282698	+	Frame_Shift_Del	DEL	AG	AG	-	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	AG	AG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	OTX1	NM_014562	exon5	c.311_312del	p.104_104del	.	.	92	22	173	0	.	70
P2RX5	5026	bcgsc.ca	37	17	3592894	3592894	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	P2RX5	NM_002561	exon7	c.T645C	p.S215S	.	.	142	5	339	3	.	22
PACSIN1	29993	bcgsc.ca	37	6	34498314	34498314	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PACSIN1	NM_020804	exon8	c.C987A	p.T329T	.	.	47	4	115	0	.	68
PAK2	5062	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	196547330	196547330	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PAK2	NM_002577	exon13	c.G1242A	p.V414V	.	.	146	40	135	0	.	957
PALD1	27143	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	72324191	72324191	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_014431	exon19	c.T2334C	p.Y778Y	.	.	79	19	168	0	.	.
PANX2	56666	ucsc.edu	37	22	50616108	50616108	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PANX2	NM_052839	exon2	c.G967A	p.D323N	.	.	40	4	66	1	.	131
PARD3	56288	bcgsc.ca	37	10	34663805	34663805	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PARD3	NM_001184788	exon11	c.A1665G	p.E555E	.	.	68	4	132	1	.	92
PARD3B	117583	bcgsc.ca	37	2	206265764	206265764	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PARD3B	NM_205863	exon19	c.T2658C	p.G886G	.	.	55	4	68	0	.	140
PARP3	10039	bcgsc.ca	37	3	51978545	51978545	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PARP3	NM_001003931	exon4	c.C473G	p.T158R	.	.	65	4	84	0	.	660
PARP4	143	bcgsc.ca	37	13	25077847	25077847	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PARP4	NM_006437	exon2	c.A68G	p.K23R	.	.	67	4	124	0	.	94
PARVA	55742	bcgsc.ca	37	11	12549411	12549411	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PARVA	NM_018222	exon13	c.A1178G	p.D393G	.	.	84	4	151	0	.	93
PATE1	160065	bcgsc.ca	37	11	125618570	125618570	+	Missense_Mutation	SNP	T	T	C	rs181711936		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PATE1	NM_138294	exon5	c.T323C	p.V108A	.	.	161	6	183	0	T|0.999;C|0.001	90
PCDH15	65217	bcgsc.ca	37	10	55582161	55582161	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PCDH15	NM_001142763	exon35	c.T5346C	p.S1782S	.	.	23	3	42	0	.	193
PCDH20	64881	bcgsc.ca	37	13	61985817	61985817	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PCDH20	NM_022843	exon2	c.T2415C	p.T805T	.	.	93	4	120	1	.	581
PCM1	5108	bcgsc.ca	37	8	17817570	17817570	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PCM1	NM_006197	exon14	c.G2088T	p.L696F	.	.	76	4	190	0	.	742
PCM1	5108	bcgsc.ca	37	8	17849179	17849179	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PCM1	NM_006197	exon28	c.G4660T	p.G1554C	.	.	91	4	214	0	.	742
PCNT	5116	ucsc.edu	37	21	47783751	47783751	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PCNT	NM_006031	exon14	c.C2511T	p.S837S	.	.	41	4	57	0	.	141
PCNX	22990	bcgsc.ca	37	14	71518668	71518668	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PCNX	NM_014982	exon24	c.G4516A	p.G1506R	.	.	75	4	118	0	.	91
PCNXL2	80003	bcgsc.ca	37	1	233394847	233394847	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PCNXL2	NM_014801	exon5	c.A761G	p.K254R	.	.	52	4	71	0	.	91
PDCD11	22984	bcgsc.ca	37	10	105160260	105160260	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PDCD11	NM_014976	exon3	c.A209G	p.E70G	.	.	61	4	99	0	.	275
PDCD11	22984	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	105162878	105162878	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PDCD11	NM_014976	exon4	c.C238T	p.L80L	.	.	216	59	348	0	.	275
PDCD1	5133	ucsc.edu	37	2	242793445	242793445	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PDCD1	NM_005018	exon5	c.A632G	p.E211G	.	.	47	4	73	2	.	69
PDE1C	5137	bcgsc.ca	37	7	31877496	31877496	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PDE1C	NM_001191058	exon11	c.A1250G	p.Q417R	.	.	56	4	77	0	.	94
PDE3B	5140	bcgsc.ca	37	11	14856636	14856636	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PDE3B	NM_000922	exon11	c.A2315G	p.E772G	.	.	56	4	103	0	.	90
PDE3B	5140	bcgsc.ca	37	11	14880736	14880736	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PDE3B	NM_000922	exon13	c.A2668G	p.I890V	.	.	95	4	181	0	.	90
PDE5A	8654	bcgsc.ca	37	4	120463723	120463723	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PDE5A	NM_001083	exon10	c.A1463G	p.D488G	.	.	78	4	131	0	.	90
PDE5A	8654	bcgsc.ca	37	4	120517706	120517706	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PDE5A	NM_001083	exon3	c.G803A	p.C268Y	.	.	56	4	93	0	.	90
PDE8B	8622	bcgsc.ca	37	5	76640720	76640720	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PDE8B	NM_001029852	exon7	c.A840G	p.E280E	.	.	123	6	171	0	.	90
PDE9A	5152	bcgsc.ca	37	21	44185508	44185508	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PDE9A	NM_002606	exon15	c.C1260A	p.I420I	.	.	134	5	190	0	.	92
PDIA5	10954	bcgsc.ca	37	3	122864396	122864396	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PDIA5	NM_006810	exon12	c.C938T	p.P313L	.	.	87	4	120	0	.	91
PDZD2	23037	ucsc.edu;bcgsc.ca	37	5	32090075	32090075	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PDZD2	NM_178140	exon19	c.T6521C	p.L2174P	.	.	42	4	100	0	.	563
PEG3	5178	bcgsc.ca	37	19	57326102	57326102	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PEG3	NM_001146184	exon9	c.T3708C	p.H1236H	.	.	58	4	41	0	.	164
PERP	64065	bcgsc.ca	37	6	138413247	138413247	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PERP	NM_022121	exon3	c.T514C	p.C172R	.	.	76	4	93	0	.	90
PHC2	1912	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	33799862	33799862	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PHC2	NM_198040	exon9	c.C1587T	p.T529T	.	.	108	48	98	0	.	227
PHF16	9767	bcgsc.ca	37	X	46917833	46917833	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PHF16	NM_001077445	exon11	c.T1826C	p.L609P	.	.	51	4	75	0	.	130
PHF20	51230	bcgsc.ca	37	20	34487564	34487564	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PHF20	NM_016436	exon10	c.T1555C	p.S519P	.	.	114	5	126	0	.	515
PHF8	23133	bcgsc.ca	37	X	54028614	54028614	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PHF8	NM_001184896	exon10	c.G1223T	p.G408V	.	.	73	5	107	0	.	133
PICALM	8301	ucsc.edu	37	11	85701400	85701400	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PICALM	NM_007166	exon13	c.C1301T	p.P434L	.	.	46	4	46	0	.	659
PITPNM2	57605	bcgsc.ca	37	12	123472430	123472430	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PITPNM2	NM_020845	exon20	c.C3016A	p.R1006R	.	.	92	4	93	0	.	228
PKD1	5310	broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	2149979	2149979	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PKD1	NM_000296	exon29	c.G9806T	p.R3269L	.	.	167	70	198	2	.	91
PKD1L3	342372	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	16	71963537	71963537	+	RNA	SNP	A	A	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PKD1L3	.	.	.	.	.	.	139	63	189	0	.	68
PKHD1	5314	bcgsc.ca	37	6	51924792	51924792	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PKHD1	NM_170724	exon15	c.T1167C	p.T389T	.	.	57	4	43	0	.	603
PKM	5315	ucsc.edu;bcgsc.ca	37	15	72499166	72499166	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001206796	exon9	c.T1265C	p.V422A	.	.	51	4	85	0	.	.
PLA2G15	23659	bcgsc.ca	37	16	68283298	68283298	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLA2G15	NM_012320	exon2	c.A233G	p.N78S	.	.	100	6	108	0	.	91
PLA2G2E	30814	ucsc.edu;bcgsc.ca	37	1	20248851	20248851	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLA2G2E	NM_014589	exon3	c.G226A	p.G76S	.	.	42	4	113	0	.	90
PLA2G7	7941	bcgsc.ca	37	6	46684267	46684267	+	Splice_Site	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLA2G7	NM_005084	exon5	c.232-2A>G	.	.	.	59	4	45	0	.	90
PLA2R1	22925	bcgsc.ca	37	2	160833829	160833829	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLA2R1	NM_001195641	exon15	c.T2367C	p.G789G	.	.	176	6	112	0	.	93
PLBD1	79887	bcgsc.ca	37	12	14659871	14659871	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLBD1	NM_024829	exon9	c.C1368T	p.Y456Y	.	.	71	4	116	0	.	90
PLCB1	23236	bcgsc.ca	37	20	8714021	8714021	+	Nonsense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLCB1	NM_015192	exon19	c.T2025G	p.Y675X	.	.	81	5	135	0	.	297
PLCE1	51196	bcgsc.ca	37	10	96006155	96006155	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLCE1	NM_016341	exon8	c.T2873C	p.V958A	.	.	88	4	126	0	.	229
PLCG1	5335	bcgsc.ca	37	20	39791111	39791111	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLCG1	NM_182811	exon5	c.A532G	p.K178E	.	.	68	5	89	0	.	911
PLCG2	5336	bcgsc.ca	37	16	81888057	81888057	+	Missense_Mutation	SNP	A	A	G	rs184409507	by1000genomes;alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLCG2	NM_002661	exon3	c.A202G	p.M68V	.	.	66	4	88	0	A|0.999;T|0.001	892
PLCL1	5334	bcgsc.ca	37	2	198948636	198948636	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLCL1	NM_006226	exon2	c.A395G	p.N132S	.	.	80	4	70	0	.	228
PLD1	5337	bcgsc.ca	37	3	171452760	171452760	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLD1	NM_002662	exon5	c.A435G	p.R145R	.	.	68	5	60	0	.	660
PLEKHA5	54477	bcgsc.ca	37	12	19422713	19422713	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLEKHA5	NM_001143821	exon9	c.C721T	p.P241S	.	.	72	4	89	0	.	227
PLEKHM3	389072	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	208865840	208865840	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PLEKHM3	NM_001080475	exon2	c.A524G	p.Q175R	.	.	156	84	168	0	.	23
PNLDC1	154197	bcgsc.ca	37	6	160232762	160232762	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PNLDC1	NM_173516	exon11	c.C850A	p.H284N	.	.	85	5	136	1	.	90
PNPLA6	10908	bcgsc.ca	37	19	7620232	7620232	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PNPLA6	NM_001166111	exon25	c.T2945C	p.V982A	.	.	44	4	48	0	.	47
PODNL1	79883	bcgsc.ca	37	19	14049004	14049004	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PODNL1	NM_024825	exon1	c.A12G	p.S4S	.	.	89	4	96	2	.	90
POGK	57645	bcgsc.ca	37	1	166819085	166819085	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	POGK	NM_017542	exon5	c.C1269A	p.P423P	.	.	68	4	49	0	.	91
POLA1	5422	bcgsc.ca	37	X	24761402	24761402	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	POLA1	NM_016937	exon23	c.A2504G	p.K835R	.	.	92	4	144	0	.	229
POLG	5428	ucsc.edu;bcgsc.ca	37	15	89873328	89873328	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	POLG	NM_002693	exon3	c.A839G	p.E280G	.	.	48	4	63	1	.	228
POLR1A	25885	bcgsc.ca	37	2	86271338	86271338	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	POLR1A	NM_015425	exon22	c.G3059A	p.G1020E	.	.	53	4	101	0	.	93
POLR1A	25885	bcgsc.ca	37	2	86276124	86276124	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	POLR1A	NM_015425	exon18	c.T2517C	p.Y839Y	.	.	82	4	124	0	.	93
POLR1A	25885	bcgsc.ca	37	2	86292487	86292487	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	POLR1A	NM_015425	exon14	c.G1968T	p.L656L	.	.	55	4	109	0	.	93
POMGNT1	55624	bcgsc.ca	37	1	46657795	46657795	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	POMGNT1	NM_017739	exon17	c.G1514A	p.G505D	.	.	77	4	106	0	.	91
POMP	51371	bcgsc.ca	37	13	29238674	29238674	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	POMP	NM_015932	exon3	c.C130T	p.P44S	.	.	151	5	341	0	.	90
PPFIBP1	8496	bcgsc.ca	37	12	27829527	27829527	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PPFIBP1	NM_177444	exon18	c.A1628G	p.N543S	.	.	72	4	113	0	.	228
PPIP5K1	9677	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	15	43827486	43827486	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PPIP5K1	NM_001130858	exon31	c.G3688C	p.E1230Q	.	.	215	84	262	0	.	90
PPM1B	5495	bcgsc.ca	37	2	44428509	44428509	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PPM1B	NM_001033556	exon2	c.A171G	p.A57A	.	.	203	7	393	3	.	227
PPP1R12A	4659	broad.mit.edu;bcgsc.ca	37	12	80175618	80175618	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PPP1R12A	NM_002480	exon23	c.T2932C	p.S978P	.	.	112	5	152	0	.	273
PPP1R1A	5502	ucsc.edu;bcgsc.ca	37	12	54975806	54975806	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PPP1R1A	NM_006741	exon5	c.A357G	p.P119P	.	.	50	5	64	0	.	226
PPP2R1A	5518	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	52716334	52716334	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	PPP2R1A,NS,carcinoma,0	PPP2R1A	NM_014225	exon6	c.C778G	p.R260G	.	.	27	13	25	0	.	1666
PPP2R1B	5519	bcgsc.ca	37	11	111630562	111630562	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PPP2R1B	NM_001177562	exon5	c.T653C	p.V218A	.	.	63	4	114	0	.	658
PPP2R3A	5523	bcgsc.ca	37	3	135722245	135722245	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PPP2R3A	NM_002718	exon2	c.C1905T	p.A635A	.	.	90	5	148	0	.	662
PPP2R5D	5528	bcgsc.ca	37	6	42976151	42976151	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PPP2R5D	NM_006245	exon9	c.T964C	p.F322L	.	.	89	5	94	0	.	1082
PPP2R5D	5528	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	42975774	42975774	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PPP2R5D	NM_006245	exon7	c.C828T	p.I276I	.	.	126	70	109	0	.	1082
PPP2R5E	5529	bcgsc.ca	37	14	63860591	63860591	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PPP2R5E	NM_006246	exon8	c.A796G	p.K266E	.	.	54	4	123	0	.	658
PPP4R1	9989	bcgsc.ca	37	18	9588781	9588781	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PPP4R1	NM_001042388	exon5	c.T366C	p.P122P	.	.	66	4	85	0	.	227
PRAMEF2	65122	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	12920107	12920107	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PRAMEF2	NM_023014	exon3	c.C847T	p.H283Y	.	.	58	20	91	0	.	68
PREX2	80243	bcgsc.ca	37	8	68939541	68939541	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	PREX2,NS,carcinoma,0	PREX2	NM_025170	exon5	c.T526C	p.Y176H	.	.	60	4	78	0	.	390
PREX2	80243	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	69021775	69021775	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PREX2	NM_024870	exon25	c.A3063T	p.E1021D	.	.	102	29	93	0	.	390
PRKAB1	5564	bcgsc.ca	37	12	120117798	120117798	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PRKAB1	NM_006253	exon6	c.T727C	p.S243P	.	.	112	5	212	0	.	846
PRKD2	25865	bcgsc.ca	37	19	47178354	47178354	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PRKD2	NM_016457	exon17	c.T2360C	p.L787P	.	.	65	4	76	0	.	759
PRKDC	5591	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	8	48839897	48839897	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PRKDC	.	.	.	.	.	.	128	31	111	0	.	1515
PRKG2	5593	bcgsc.ca	37	4	82027058	82027058	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PRKG2	NM_006259	exon15	c.A1972G	p.T658A	.	.	90	4	127	0	.	524
PROX1	5629	bcgsc.ca	37	1	214171388	214171388	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PROX1	NM_001270616	exon2	c.T1510C	p.F504L	.	.	58	4	49	0	.	654
PRR5-ARHGAP8	553158	bcgsc.ca	37	22	45197990	45197990	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PRR5-ARHGAP8	NM_181334	exon6	c.T479C	p.F160S	.	.	138	5	187	0	.	161
PSD2	84249	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	139189232	139189232	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PSD2	NM_032289	exon2	c.T207C	p.H69H	.	.	168	88	231	0	.	91
PSMD3	5709	bcgsc.ca	37	17	38153777	38153777	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PSMD3	NM_002809	exon12	c.G1548T	p.Q516H	.	.	81	5	129	0	.	92
PSMD5	5711	ucsc.edu;bcgsc.ca	37	9	123595662	123595662	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PSMD5	NM_005047	exon2	c.G246T	p.R82R	.	.	40	4	62	0	.	90
PTEN	5728	ucsc.edu;bcgsc.ca	37	10	89711906	89711906	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	PTEN,NS,carcinoma,+1	PTEN	NM_000314	exon6	c.T524C	p.V175A	.	.	46	4	71	0	.	17735
PTPN13	5783	bcgsc.ca	37	4	87679930	87679930	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PTPN13	NM_080683	exon22	c.T3413C	p.L1138S	.	.	84	4	91	0	.	230
PTPN14	5784	bcgsc.ca	37	1	214575086	214575086	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PTPN14	NM_005401	exon7	c.T611C	p.M204T	.	.	62	4	102	0	.	290
PTPN14	5784	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	214557484	214557484	+	Missense_Mutation	SNP	G	G	A	rs200947677		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PTPN14	NM_005401	exon13	c.C1714T	p.R572W	.	.	54	18	55	0	G|0.999;A|0.001	290
PTPN22	26191	bcgsc.ca	37	1	114414269	114414269	+	RNA	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PTPN22	.	.	.	.	.	.	24	3	56	0	.	227
PTPRD	5789	bcgsc.ca	37	9	8465630	8465630	+	Missense_Mutation	SNP	T	T	C	rs140976651	byfrequency;alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PTPRD	NM_002839	exon32	c.A3550G	p.R1184G	.	.	131	5	263	0	T|0.999;G|0.001	912
PTPRF	5792	bcgsc.ca	37	1	44058171	44058171	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PTPRF	NM_130440	exon11	c.A1712G	p.D571G	.	.	55	4	55	0	.	232
PTPRT	11122	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	40714481	40714481	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PTPRT	NM_133170	exon29	c.T3916C	p.Y1306H	.	.	102	30	82	0	.	664
PXK	54899	bcgsc.ca	37	3	58410663	58410663	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PXK	NM_017771	exon18	c.T1713C	p.D571D	.	.	157	6	170	1	.	334
PYCARD	29108	bcgsc.ca	37	16	31212975	31212975	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PYCARD	NM_013258	exon3	c.C519T	p.C173C	.	.	75	4	56	0	.	651
PYGL	5836	bcgsc.ca	37	14	51376702	51376702	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	PYGL	NM_002863	exon17	c.C2088T	p.A696A	.	.	90	5	209	0	.	91
R3HDM1	23518	bcgsc.ca	37	2	136362487	136362487	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	R3HDM1	NM_015361	exon3	c.A72G	p.K24K	.	.	54	4	62	0	.	91
R3HDM2	22864	bcgsc.ca	37	12	57652814	57652814	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	R3HDM2	NM_014925	exon18	c.G2118T	p.V706V	.	.	42	4	32	0	.	92
RAB11FIP1	80223	bcgsc.ca	37	8	37730208	37730208	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RAB11FIP1	NM_001002814	exon4	c.A2112G	p.E704E	.	.	125	5	344	0	.	92
RAB34	83871	ucsc.edu;bcgsc.ca	37	17	27042076	27042076	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RAB34	NM_001144943	exon9	c.A749G	p.E250G	.	.	39	4	63	0	.	227
RAD21	5885	bcgsc.ca	37	8	117874145	117874145	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RAD21	NM_006265	exon4	c.A309G	p.A103A	.	.	92	5	83	0	.	227
RAD51AP1	10635	bcgsc.ca	37	12	4657923	4657923	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RAD51AP1	NM_001130862	exon7	c.T528C	p.A176A	.	.	87	4	136	0	.	227
RALGAPA1	253959	ucsc.edu	37	14	36190952	36190952	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RALGAPA1	NM_194301	exon16	c.A2208G	p.T736T	.	.	46	4	103	0	.	138
RALGAPB	57148	bcgsc.ca	37	20	37150224	37150224	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RALGAPB	NM_020336	exon10	c.A1502G	p.D501G	.	.	119	5	126	0	.	92
RALGDS	5900	bcgsc.ca	37	9	135981396	135981396	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RALGDS	NM_006266	exon9	c.T1525C	p.F509L	.	.	74	4	105	0	.	722
RALGPS1	9649	bcgsc.ca	37	9	129831584	129831584	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RALGPS1	NM_001190729	exon8	c.A559G	p.T187A	.	.	68	4	97	0	.	227
RANBP10	57610	broad.mit.edu	37	16	67761310	67761310	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RANBP10	NM_020850	exon13	c.C1652T	p.P551L	.	.	116	6	110	0	.	227
RANBP17	64901	bcgsc.ca	37	5	170668012	170668012	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RANBP17	NM_022897	exon23	c.T2503C	p.S835P	.	.	125	5	174	0	.	524
RANBP3L	202151	bcgsc.ca	37	5	36251561	36251561	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RANBP3L	NM_001161429	exon14	c.A1283G	p.H428R	.	.	90	4	163	1	.	91
RAP1GDS1	5910	bcgsc.ca	37	4	99355191	99355191	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RAP1GDS1	NM_001100426	exon13	c.A1548G	p.A516A	.	.	45	4	135	0	.	660
RASA1	5921	bcgsc.ca	37	5	86648988	86648988	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RASA1	NM_002890	exon9	c.T1268C	p.I423T	.	.	157	6	237	0	.	661
RASA1	5921	bcgsc.ca	37	5	86685242	86685242	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RASA1	NM_002890	exon24	c.T2958C	p.H986H	.	.	69	4	77	0	.	661
RASA2	5922	bcgsc.ca	37	3	141248590	141248590	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RASA2	NM_006506	exon4	c.T396C	p.S132S	.	.	58	4	62	0	.	661
RASGRP3	25780	bcgsc.ca	37	2	33741655	33741655	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RASGRP3	NM_170672	exon5	c.A117G	p.L39L	.	.	109	6	181	0	.	661
RASSF9	9182	bcgsc.ca	37	12	86199092	86199092	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RASSF9	NM_005447	exon2	c.G696A	p.Q232Q	.	.	78	4	133	0	.	23
RBBP5	5929	bcgsc.ca	37	1	205068902	205068902	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RBBP5	NM_005057	exon9	c.T945C	p.S315S	.	.	194	6	120	0	.	226
RBBP5	5929	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	205084043	205084043	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RBBP5	NM_005057	exon3	c.C92T	p.T31I	.	.	369	120	192	0	.	226
RBBP8	5932	bcgsc.ca	37	18	20569277	20569277	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RBBP8	NM_203292	exon9	c.A803G	p.E268G	.	.	84	4	103	0	.	659
RBM15	64783	bcgsc.ca	37	1	110882570	110882570	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RBM15	NM_022768	exon1	c.T543C	p.L181L	.	.	47	4	153	0	.	661
RBM41	55285	bcgsc.ca	37	X	106358609	106358609	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RBM41	NM_001171080	exon4	c.T496C	p.S166P	.	.	80	4	84	0	.	131
RBM6	10180	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	50095360	50095360	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RBM6	NM_005777	exon9	c.G1893A	p.R631R	.	.	52	35	49	0	.	280
RET	5979	ucsc.edu;bcgsc.ca	37	10	43613903	43613903	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RET	NM_020975	exon13	c.A2367G	p.K789K	.	.	52	5	86	0	.	4507
REV3L	5980	bcgsc.ca	37	6	111656778	111656778	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	REV3L	NM_002912	exon22	c.G7574A	p.R2525H	.	.	88	4	140	0	.	294
RGN	9104	bcgsc.ca	37	X	46951148	46951148	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RGN	NM_004683	exon5	c.G634A	p.G212R	.	.	65	4	110	0	.	130
RGS12	6002	bcgsc.ca	37	4	3429851	3429851	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RGS12	NM_002926	exon15	c.A3366G	p.K1122K	.	.	86	4	149	0	.	226
RGS22	26166	bcgsc.ca	37	8	100990178	100990178	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RGS22	NM_015668	exon23	c.A3486C	p.K1162N	.	.	498	1	499	5	.	140
RGS22	26166	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	8	101118126	101118126	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RGS22	NM_015668	exon1	c.G24T	p.A8A	.	.	60	34	40	0	.	140
RHBDF1	64285	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	16	111695	111695	+	Splice_Site	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RHBDF1	NM_022450	exon10	c.1209-1G>A	.	.	.	45	21	45	0	.	92
RHEBL1	121268	bcgsc.ca	37	12	49462880	49462880	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RHEBL1	NM_144593	exon2	c.C62A	p.S21Y	.	.	80	4	136	0	.	659
RHOF	54509	bcgsc.ca	37	12	122231484	122231484	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RHOF	NM_019034	exon1	c.A56G	p.E19G	.	.	33	5	68	0	.	660
RIMS1	22999	bcgsc.ca	37	6	72975164	72975164	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RIMS1	NM_014989	exon21	c.T3266C	p.F1089S	.	.	86	4	214	0	.	144
RING1	6015	broad.mit.edu;bcgsc.ca	37	6	33178961	33178961	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RING1	NM_002931	exon5	c.C482T	p.P161L	.	.	23	3	35	0	.	159
RINT1	60561	bcgsc.ca	37	7	105192140	105192140	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RINT1	NM_021930	exon10	c.T1457C	p.L486P	.	.	81	5	122	1	.	517
RLF	6018	bcgsc.ca	37	1	40654860	40654860	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RLF	NM_012421	exon2	c.T371C	p.L124S	.	.	65	4	87	0	.	93
RLTPR	146206	bcgsc.ca	37	16	67681277	67681277	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RLTPR	NM_001013838	exon10	c.T763C	p.C255R	.	.	88	4	124	1	.	67
RMND1	55005	bcgsc.ca	37	6	151766496	151766496	+	Missense_Mutation	SNP	A	A	G	rs141807539		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RMND1	NM_017909	exon2	c.T451C	p.S151P	.	.	68	5	113	0	A|1.000;G|0.000	90
RNF144B	255488	bcgsc.ca	37	6	18463555	18463555	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RNF144B	NM_182757	exon7	c.C715T	p.P239S	.	.	121	5	104	0	.	226
RNF14	9604	bcgsc.ca	37	5	141358109	141358109	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RNF14	NM_001201365	exon5	c.T548C	p.V183A	.	.	63	4	118	0	.	226
RNF175	285533	bcgsc.ca	37	4	154669831	154669831	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RNF175	NM_173662	exon3	c.T212C	p.V71A	.	.	72	4	92	0	.	47
RNF216	54476	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	5662625	5662625	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RNF216	NM_207111	exon17	c.A2638G	p.M880V	.	.	63	17	115	0	.	274
RNMTL1	55178	ucsc.edu	37	17	691302	691302	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RNMTL1	NM_018146	exon3	c.C657T	p.D219D	.	.	43	4	110	0	.	91
ROR2	4920	bcgsc.ca	37	9	94538030	94538030	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ROR2	NM_004560	exon2	c.T168C	p.T56T	.	.	50	4	85	0	.	1471
RP1L1	94137	bcgsc.ca	37	8	10470479	10470479	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RP1L1	NM_178857	exon4	c.T1129C	p.S377P	.	.	20	4	40	0	.	139
RP2	6102	bcgsc.ca	37	X	46713509	46713509	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RP2	NM_006915	exon2	c.A701G	p.E234G	.	.	69	4	85	0	.	130
RPL34	6164	bcgsc.ca	37	4	109543160	109543160	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RPL34	NM_033625	exon2	c.A45G	p.T15T	.	.	39	4	43	0	.	90
RPL36A-HNRNPH2	0	bcgsc.ca	37	X	100650438	100650438	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001199973	exon4	c.A401G	p.K134R	.	.	99	4	168	0	.	.
RPS6	6194	bcgsc.ca	37	9	19376607	19376607	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RPS6	NM_001010	exon5	c.T539C	p.V180A	.	.	49	4	88	0	.	523
RRP1B	23076	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	45089836	45089836	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RRP1B	NM_015056	exon2	c.C202A	p.P68T	.	.	192	103	310	0	.	91
RTN4	57142	bcgsc.ca	37	2	55253459	55253459	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RTN4	NM_020532	exon3	c.T1776C	p.P592P	.	.	74	5	130	0	.	155
RWDD2A	112611	bcgsc.ca	37	6	83905456	83905456	+	Missense_Mutation	SNP	C	C	T	rs144591462		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	RWDD2A	NM_033411	exon3	c.C344T	p.P115L	.	.	77	4	140	0	C|0.999;T|0.001	68
SAA3P	6290	bcgsc.ca	37	11	18134827	18134827	+	RNA	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SAA3P	.	.	.	.	.	.	31	4	57	0	.	68
SAGE1	55511	bcgsc.ca	37	X	134994488	134994488	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SAGE1	NM_018666	exon19	c.A2530G	p.R844G	.	.	85	5	126	1	.	133
SAP30L	79685	bcgsc.ca	37	5	153830761	153830761	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SAP30L	NM_024632	exon2	c.T312C	p.T104T	.	.	106	5	118	0	.	226
SASH1	23328	ucsc.edu;bcgsc.ca	37	6	148869462	148869462	+	Missense_Mutation	SNP	G	G	T	rs143577116	byfrequency;alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SASH1	NM_015278	exon20	c.G3512T	p.R1171L	.	.	43	4	57	0	G|0.999;A|0.001	90
SATB1	6304	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	3	18436227	18436227	+	Silent	SNP	A	A	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SATB1	NM_002971	exon7	c.T933A	p.P311P	.	.	103	60	156	0	.	228
SCAF4	57466	bcgsc.ca	37	21	33057894	33057894	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SCAF4	NM_020706	exon17	c.G2196A	p.M732I	.	.	84	4	102	0	.	90
SCAMP4	113178	bcgsc.ca	37	19	1918944	1918944	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SCAMP4	NM_079834	exon5	c.T350C	p.V117A	.	.	220	6	241	0	.	68
SCARB2	950	bcgsc.ca	37	4	77089597	77089597	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SCARB2	NM_005506	exon9	c.G1146A	p.R382R	.	.	87	4	101	0	.	90
SCG2	7857	bcgsc.ca	37	2	224462766	224462766	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SCG2	NM_003469	exon2	c.A1235G	p.K412R	.	.	97	4	101	0	.	69
SCML1	6322	bcgsc.ca	37	X	17768332	17768332	+	Missense_Mutation	SNP	G	G	T	rs199560760	alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SCML1	NM_001037540	exon6	c.G622T	p.G208W	.	.	53	4	81	0	G|1.000;A|0.000	290
SCN4A	6329	bcgsc.ca	37	17	62018164	62018164	+	Silent	SNP	A	A	G	rs2227906	byfrequency;alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SCN4A	NM_000334	exon24	c.T5478C	p.T1826T	.	.	43	4	59	0	A|0.808;C|0.192	93
SCN9A	6335	bcgsc.ca	37	2	167085264	167085264	+	Silent	SNP	T	T	C	rs200610689		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SCN9A	NM_002977	exon22	c.A4110G	p.R1370R	.	.	173	6	196	0	.	181
SCYL2	55681	bcgsc.ca	37	12	100676749	100676749	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SCYL2	NM_017988	exon2	c.A1G	p.M1V	.	.	56	4	62	0	.	336
SCYL2	55681	bcgsc.ca	37	12	100717354	100717354	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SCYL2	NM_017988	exon11	c.T1447C	p.S483P	.	.	50	4	84	0	.	336
SDCBP	6386	bcgsc.ca	37	8	59493122	59493122	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SDCBP	NM_001007067	exon8	c.C797T	p.T266I	.	.	91	4	93	0	.	90
SDF4	51150	bcgsc.ca	37	1	1163992	1163992	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SDF4	NM_016547	exon2	c.A182G	p.H61R	.	.	99	5	231	0	.	154
SEBOX	645832	bcgsc.ca	37	17	26691342	26691342	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001080837	exon3	c.T599C	p.L200P	.	.	67	4	98	0	.	.
SEC14L5	9717	bcgsc.ca	37	16	5046381	5046381	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_014692	exon7	c.T700C	p.C234R	.	.	62	4	60	0	.	.
SEMA3E	9723	bcgsc.ca	37	7	83031996	83031996	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SEMA3E	NM_012431	exon10	c.C1095T	p.Y365Y	.	.	55	4	108	0	.	93
SEPT7L	285961	bcgsc.ca	37	10	38682042	38682042	+	RNA	SNP	T	T	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	.	.	.	.	.	.	58	29	98	0	.	.
SERPINB11	89778	bcgsc.ca	37	18	61383340	61383340	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SERPINB11	.	.	.	.	.	.	64	4	172	0	.	67
SETDB2	83852	ucsc.edu;bcgsc.ca	37	13	50054356	50054356	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SETDB2	NM_031915	exon8	c.A907G	p.T303A	.	.	43	4	118	0	.	91
SETX	23064	bcgsc.ca	37	9	135205692	135205692	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SETX	NM_015046	exon10	c.G1293T	p.Q431H	.	.	42	4	92	0	.	93
SF3B3	23450	bcgsc.ca	37	16	70597846	70597846	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SF3B3	NM_012426	exon18	c.A2356G	p.R786G	.	.	156	7	210	0	.	91
SFI1	9814	bcgsc.ca	37	22	32013061	32013061	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SFI1	NM_001007467	exon31	c.T3509C	p.L1170P	.	.	64	4	76	0	.	90
SFXN3	81855	ucsc.edu;bcgsc.ca	37	10	102794566	102794566	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SFXN3	NM_030971	exon3	c.T127C	p.S43P	.	.	55	5	90	0	.	91
SGCA	6442	bcgsc.ca	37	17	48245056	48245056	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SGCA	NM_001135697	exon3	c.G271A	p.G91S	.	.	52	4	53	0	.	92
SGSH	6448	bcgsc.ca	37	17	78188467	78188467	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SGSH	NM_000199	exon4	c.C453T	p.N151N	.	.	54	4	50	0	.	91
SH3GL2	6456	ucsc.edu;bcgsc.ca	37	9	17786386	17786386	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SH3GL2	NM_003026	exon4	c.A195G	p.R65R	.	.	42	4	77	0	.	91
SIGIRR	59307	ucsc.edu;bcgsc.ca	37	11	408175	408175	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SIGIRR	NM_021805	exon4	c.T238C	p.S80P	.	.	44	4	43	0	.	90
SIGLEC7	27036	bcgsc.ca	37	19	51648186	51648186	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SIGLEC7	NM_014385	exon3	c.A730G	p.T244A	.	.	81	4	124	0	.	153
SKA3	221150	bcgsc.ca	37	13	21732108	21732108	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SKA3	NM_145061	exon7	c.A1072G	p.T358A	.	.	71	4	74	0	.	90
SKIV2L	6499	broad.mit.edu	37	6	31936548	31936548	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SKIV2L	NM_006929	exon25	c.T3155C	p.L1052P	.	.	76	4	117	4	.	290
SLC12A1	6557	broad.mit.edu	37	15	48580325	48580325	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC12A1	NM_001184832	exon22	c.A2715G	p.K905K	.	.	95	7	134	0	.	24
SLC12A6	9990	bcgsc.ca	37	15	34628818	34628818	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC12A6	NM_133647	exon1	c.A64G	p.I22V	.	.	75	4	121	0	.	517
SLC15A3	51296	bcgsc.ca	37	11	60714168	60714168	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC15A3	NM_016582	exon2	c.G684A	p.L228L	.	.	52	4	110	0	.	90
SLC19A2	10560	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	169446920	169446920	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC19A2	NM_006996	exon2	c.T280C	p.Y94H	.	.	180	57	141	2	.	90
SLC19A3	80704	bcgsc.ca	37	2	228566907	228566907	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC19A3	NM_025243	exon2	c.A128G	p.D43G	.	.	94	4	135	0	.	92
SLC22A18AS	5003	bcgsc.ca	37	11	2920704	2920704	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_007105	exon3	c.G228T	p.R76S	.	.	67	4	78	0	.	.
SLC25A10	1468	bcgsc.ca	37	17	79682600	79682600	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC25A10	NM_001270888	exon3	c.G306T	p.K102N	.	.	73	4	63	1	.	90
SLC25A35	399512	bcgsc.ca	37	17	8193199	8193199	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC25A35	NM_201520	exon5	c.T833C	p.F278S	.	.	56	4	142	0	.	90
SLC26A4	5172	bcgsc.ca	37	7	107341552	107341552	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC26A4	NM_000441	exon16	c.T1714C	p.F572L	.	.	92	4	133	0	.	96
SLC26A5	375611	bcgsc.ca	37	7	103033456	103033456	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC26A5	NM_206883	exon10	c.C1029T	p.A343A	.	.	110	5	151	0	.	91
SLC2A9	56606	bcgsc.ca	37	4	9892298	9892298	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC2A9	NM_020041	exon9	c.T1151C	p.L384P	.	.	55	4	63	0	.	93
SLC35A2	7355	ucsc.edu;bcgsc.ca	37	X	48763797	48763797	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC35A2	NM_001042498	exon3	c.T298C	p.F100L	.	.	46	4	52	0	.	193
SLC44A2	57153	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	19	10753056	10753056	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC44A2	NM_020428	exon21	c.G1943A	p.G648D	.	.	205	82	310	0	.	91
SLC4A3	6508	bcgsc.ca	37	2	220506371	220506371	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC4A3	NM_005070	exon23	c.3622-2A>G	.	.	.	81	4	93	0	.	157
SLC7A14	57709	bcgsc.ca	37	3	170198689	170198689	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC7A14	NM_020949	exon7	c.A1382G	p.K461R	.	.	135	6	150	0	.	94
SLC8A1	6546	bcgsc.ca	37	2	40405619	40405619	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC8A1	NM_021097	exon2	c.T1823C	p.V608A	.	.	51	4	134	0	.	93
SLC8A2	6543	ucsc.edu;bcgsc.ca	37	19	47935595	47935595	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLC8A2	NM_015063	exon9	c.G2218A	p.V740M	.	.	32	4	40	0	.	94
SLU7	10569	bcgsc.ca	37	5	159833554	159833554	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SLU7	NM_006425	exon12	c.A1208G	p.H403R	.	.	70	4	114	0	.	91
SMAD3	4088	bcgsc.ca	37	15	67479819	67479819	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SMAD3	NM_005902	exon8	c.T1126C	p.F376L	.	.	48	4	68	0	.	904
SMCR7L	54471	ucsc.edu;bcgsc.ca	37	22	39910017	39910017	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SMCR7L	NM_019008	exon6	c.T1081C	p.S361P	.	.	21	4	39	0	.	90
SMNDC1	10285	ucsc.edu;bcgsc.ca	37	10	112063292	112063292	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SMNDC1	NM_005871	exon2	c.A54G	p.Q18Q	.	.	35	4	70	0	.	91
SMTNL1	219537	bcgsc.ca	37	11	57310437	57310437	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SMTNL1	NM_001105565	exon1	c.T322C	p.S108P	.	.	53	4	70	0	.	23
SMYD1	150572	bcgsc.ca	37	2	88408058	88408058	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SMYD1	NM_198274	exon9	c.G1314A	p.E438E	.	.	23	4	43	0	.	229
SNORD105	692229	ucsc.edu	37	19	10218392	10218392	+	RNA	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	.	.	.	.	.	.	23	4	16	0	.	.
SNRNP200	23020	bcgsc.ca	37	2	96959105	96959105	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SNRNP200	NM_014014	exon15	c.C1985T	p.A662V	.	.	62	4	129	0	.	162
SNRNP200	23020	bcgsc.ca	37	2	96963417	96963417	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SNRNP200	NM_014014	exon10	c.G1161A	p.M387I	.	.	63	4	137	0	.	162
SNRNP200	23020	bcgsc.ca	37	2	96969021	96969021	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SNRNP200	NM_014014	exon3	c.G257A	p.G86D	.	.	84	4	142	0	.	162
SNRPD3	6634	bcgsc.ca	37	22	24964133	24964133	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SNRPD3	NM_004175	exon3	c.T308C	p.L103P	.	.	73	5	72	0	.	91
SNTB2	6645	bcgsc.ca	37	16	69294063	69294063	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SNTB2	NM_006750	exon3	c.T905C	p.L302P	.	.	61	4	144	0	.	90
SNX13	23161	bcgsc.ca	37	7	17838342	17838342	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SNX13	NM_015132	exon24	c.A2484G	p.E828E	.	.	52	4	91	0	.	650
SNX13	23161	bcgsc.ca	37	7	17879624	17879624	+	Splice_Site	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SNX13	NM_015132	exon14	c.1166-1G>T	.	.	.	58	4	76	0	.	650
SNX29	92017	bcgsc.ca	37	16	12142384	12142384	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SNX29	NM_032167	exon7	c.A655G	p.R219G	.	.	74	6	96	0	.	23
SNX6	58533	bcgsc.ca	37	14	35072577	35072577	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SNX6	NM_152233	exon6	c.G529A	p.V177I	.	.	123	5	279	0	.	226
SORCS2	57537	ucsc.edu;bcgsc.ca	37	4	7716009	7716009	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SORCS2	NM_020777	exon16	c.A2032G	p.R678G	.	.	45	4	48	0	.	91
SORL1	6653	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	121383718	121383718	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SORL1	NM_003105	exon7	c.T946C	p.L316L	.	.	90	32	97	0	.	228
SP140	11262	bcgsc.ca	37	2	231134277	231134277	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SP140	NM_007237	exon13	c.A1271G	p.N424S	.	.	172	6	144	0	.	90
SPAG6	9576	bcgsc.ca	37	10	22690170	22690170	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SPAG6	NM_172242	exon9	c.C1278T	p.P426P	.	.	69	4	132	0	.	153
SPATA12	353324	bcgsc.ca	37	3	57107961	57107961	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SPATA12	NM_181727	exon2	c.A239G	p.E80G	.	.	103	6	114	1	.	90
SPATA22	84690	bcgsc.ca	37	17	3343611	3343611	+	Missense_Mutation	SNP	T	T	C	rs190850127	alternate_allele	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SPATA22	NM_032598	exon9	c.A922G	p.I308V	.	.	59	4	222	0	T|0.999;G|0.001	90
SPATA22	84690	bcgsc.ca	37	17	3352357	3352357	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SPATA22	NM_032598	exon6	c.C416A	p.A139E	.	.	129	5	347	1	.	90
SPATA31C1	441452	bcgsc.ca	37	9	90536151	90536151	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001145124	exon4	c.C1329T	p.S443S	.	.	79	4	136	0	.	.
SPEN	23013	bcgsc.ca	37	1	16202933	16202933	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SPEN	NM_015001	exon3	c.T641C	p.V214A	.	.	65	5	100	0	.	298
SPEN	23013	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	16257658	16257658	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SPEN	NM_015001	exon11	c.T4923G	p.S1641R	.	.	64	20	68	0	.	298
SPPL2A	84888	bcgsc.ca	37	15	51028852	51028852	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SPPL2A	NM_032802	exon7	c.T819C	p.Y273Y	.	.	101	5	146	0	.	90
SPSB2	84727	bcgsc.ca	37	12	6981535	6981535	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SPSB2	NM_032641	exon2	c.T531C	p.T177T	.	.	73	4	98	0	.	226
SPTAN1	6709	bcgsc.ca	37	9	131331131	131331131	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SPTAN1	NM_003127	exon3	c.A318G	p.G106G	.	.	76	4	117	0	.	158
SPTB	6710	ucsc.edu;bcgsc.ca	37	14	65239594	65239594	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SPTB	NM_001024858	exon25	c.T5257C	p.F1753L	.	.	41	4	67	0	.	100
SPTBN5	51332	ucsc.edu	37	15	42158071	42158071	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SPTBN5	NM_016642	exon39	c.C6748T	p.Q2250X	.	.	46	4	67	0	.	91
SRGAP1	57522	bcgsc.ca	37	12	64383793	64383793	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SRGAP1	NM_020762	exon3	c.A367G	p.N123D	.	.	82	4	161	0	.	653
SRGAP3	9901	bcgsc.ca	37	3	9089145	9089145	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SRGAP3	NM_014850	exon10	c.T1338C	p.Y446Y	.	.	77	4	118	0	.	344
SRRM2	23524	bcgsc.ca	37	16	2806481	2806481	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SRRM2	NM_016333	exon2	c.A116G	p.E39G	.	.	50	4	53	0	.	93
SRRM5	100170229	bcgsc.ca	37	19	44117021	44117021	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001145641	exon1	c.A748G	p.I250V	.	.	44	4	96	0	.	.
SRSF5	6430	bcgsc.ca	37	14	70235377	70235377	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SRSF5	NM_001039465	exon3	c.A183G	p.E61E	.	.	112	5	212	0	.	226
SSB	6741	bcgsc.ca	37	2	170667807	170667807	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SSB	NM_003142	exon11	c.A1112G	p.D371G	.	.	160	5	174	0	.	94
SSFA2	6744	bcgsc.ca	37	2	182766671	182766671	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SSFA2	NM_001130445	exon8	c.A891G	p.K297K	.	.	86	4	113	0	.	153
SSRP1	6749	bcgsc.ca	37	11	57100179	57100179	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SSRP1	NM_003146	exon6	c.T688C	p.F230L	.	.	76	5	106	0	.	228
ST3GAL5	8869	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	86075030	86075030	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ST3GAL5	NM_003896	exon4	c.G616A	p.G206R	.	.	36	5	49	0	.	90
ST6GALNAC1	55808	bcgsc.ca	37	17	74621904	74621904	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ST6GALNAC1	NM_018414	exon8	c.C1602T	p.D534D	.	.	70	5	75	0	.	90
ST8SIA5	29906	bcgsc.ca	37	18	44262022	44262022	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ST8SIA5	NM_013305	exon6	c.A575G	p.N192S	.	.	76	4	105	0	.	517
STAM	8027	bcgsc.ca	37	10	17746992	17746992	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	STAM	NM_003473	exon11	c.C1024T	p.L342F	.	.	55	4	97	0	.	154
STAT1	6772	bcgsc.ca	37	2	191839617	191839617	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	STAT1	NM_007315	exon24	c.T2177C	p.M726T	.	.	132	5	140	0	.	1335
STAT3	6774	bcgsc.ca	37	17	40481665	40481665	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	STAT3	NM_003150	exon13	c.A1140G	p.G380G	.	.	72	4	83	0	.	1271
STOML2	30968	bcgsc.ca	37	9	35101907	35101907	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	STOML2	NM_013442	exon4	c.T336C	p.P112P	.	.	71	5	125	1	.	90
STRA6	64220	bcgsc.ca	37	15	74477348	74477348	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	STRA6	NM_001199042	exon13	c.T1256C	p.V419A	.	.	80	4	90	0	.	90
STRA8	346673	bcgsc.ca	37	7	134936597	134936597	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	STRA8	NM_182489	exon7	c.A782G	p.E261G	.	.	222	6	305	2	.	68
STRBP	55342	bcgsc.ca	37	9	125936045	125936045	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	STRBP	NM_018387	exon5	c.A301G	p.M101V	.	.	97	5	167	0	.	154
STX3	6809	bcgsc.ca	37	11	59558006	59558006	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	STX3	NM_004177	exon5	c.A304G	p.I102V	.	.	65	4	84	0	.	92
SUCLG1	8802	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	84660559	84660559	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SUCLG1	NM_003849	exon6	c.G590A	p.G197D	.	.	81	34	172	0	.	90
SUCO	51430	bcgsc.ca	37	1	172558960	172558960	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_014283	exon18	c.G2719A	p.G907R	.	.	86	6	56	0	.	.
SULF1	23213	bcgsc.ca	37	8	70515425	70515425	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SULF1	NM_001128204	exon10	c.1062-2A>G	.	.	.	94	4	126	0	.	518
SULF1	23213	bcgsc.ca	37	8	70517058	70517058	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SULF1	NM_001128205	exon13	c.A1268G	p.E423G	.	.	53	4	95	0	.	518
SUMF1	285362	bcgsc.ca	37	3	4452588	4452588	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SUMF1	NM_001164675	exon7	c.G915T	p.W305C	.	.	59	4	115	0	.	91
SUPT6H	6830	bcgsc.ca	37	17	27016507	27016507	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SUPT6H	NM_003170	exon25	c.A3270G	p.E1090E	.	.	74	4	85	0	.	93
SYMPK	8189	bcgsc.ca	37	19	46327071	46327071	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SYMPK	NM_004819	exon19	c.A2553G	p.G851G	.	.	71	4	106	0	.	91
SYN3	8224	bcgsc.ca	37	22	33376658	33376658	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SYN3	NM_001135774	exon3	c.A341G	p.N114S	.	.	72	4	94	0	.	92
SYNE1	23345	bcgsc.ca	37	6	152576111	152576111	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SYNE1	NM_182961	exon104	c.G19374A	p.L6458L	.	.	64	4	130	1	.	607
SYNE3	161176	ucsc.edu;bcgsc.ca	37	14	95906121	95906121	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_152592	exon12	c.A2074G	p.R692G	.	.	21	4	44	0	.	.
SYNRG	11276	bcgsc.ca	37	17	35913277	35913277	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SYNRG	NM_007247	exon14	c.G2548A	p.V850I	.	.	91	4	119	0	.	92
SYT9	143425	bcgsc.ca	37	11	7441746	7441746	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SYT9	NM_175733	exon6	c.C1347T	p.H449H	.	.	90	4	144	0	.	155
SYTL3	94120	bcgsc.ca	37	6	159184468	159184468	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	SYTL3	NM_001242384	exon18	c.G1650T	p.L550F	.	.	51	4	55	0	.	90
SZRD1	26099	bcgsc.ca	37	1	16693763	16693763	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001114600	exon1	c.A11G	p.E4G	.	.	22	5	54	0	.	.
TAAR9	134860	bcgsc.ca	37	6	132860440	132860440	+	RNA	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	.	.	.	.	.	.	52	4	111	0	.	.
TAB2	23118	bcgsc.ca	37	6	149730847	149730847	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TAB2	NM_015093	exon9	c.C2074A	p.H692N	.	.	79	4	135	0	.	227
TACR3	6870	ucsc.edu;bcgsc.ca	37	4	104640338	104640338	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TACR3	NM_001059	exon1	c.T495C	p.P165P	.	.	26	4	75	0	.	525
TAF2	6873	bcgsc.ca	37	8	120768311	120768311	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TAF2	NM_003184	exon22	c.A2813G	p.K938R	.	.	74	4	57	0	.	274
TAL1	6886	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	47685719	47685719	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TAL1	NM_003189	exon4	c.C669T	p.L223L	.	.	178	71	224	0	.	1082
TANC1	85461	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	2	160053178	160053178	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TANC1	NM_033394	exon18	c.C3039T	p.H1013H	.	.	100	34	106	0	.	92
TAOK1	57551	bcgsc.ca	37	17	27807440	27807440	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TAOK1	NM_025142	exon7	c.T504C	p.A168A	.	.	71	4	98	0	.	521
TAOK1	57551	bcgsc.ca	37	17	27834915	27834915	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TAOK1	NM_025142	exon14	c.T1340C	p.V447A	.	.	44	4	60	0	.	521
TAOK3	51347	bcgsc.ca	37	12	118671487	118671487	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TAOK3	NM_016281	exon9	c.T635C	p.I212T	.	.	64	4	66	0	.	933
TARBP1	6894	bcgsc.ca	37	1	234603267	234603267	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TARBP1	NM_005646	exon4	c.T1229C	p.F410S	.	.	136	6	269	0	.	93
TAS1R3	83756	bcgsc.ca	37	1	1269666	1269666	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TAS1R3	NM_152228	exon6	c.A2381G	p.Q794R	.	.	58	4	156	0	.	22
TASP1	55617	ucsc.edu;bcgsc.ca	37	20	13610722	13610722	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TASP1	NM_017714	exon2	c.A4G	p.T2A	.	.	32	6	68	0	.	90
TBC1D8	11138	bcgsc.ca	37	2	101652591	101652591	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TBC1D8	NM_001102426	exon9	c.T1447C	p.F483L	.	.	98	6	199	0	.	25
TBC1D8	11138	bcgsc.ca	37	2	101675907	101675907	+	Silent	SNP	G	G	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TBC1D8	NM_001102426	exon3	c.C333G	p.A111A	.	.	50	4	110	0	.	25
TBC1D9	23158	ucsc.edu;bcgsc.ca	37	4	141622704	141622704	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TBC1D9	NM_015130	exon2	c.C195A	p.I65I	.	.	26	4	89	0	.	23
TBCK	93627	bcgsc.ca	37	4	107154140	107154140	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TBCK	NM_001163436	exon17	c.T1594A	p.L532I	.	.	48	4	124	0	.	336
TBK1	29110	bcgsc.ca	37	12	64889531	64889531	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TBK1	NM_013254	exon15	c.T1696C	p.F566L	.	.	71	4	114	0	.	1459
TBX20	57057	bcgsc.ca	37	7	35288367	35288367	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TBX20	NM_001077653	exon3	c.A467G	p.D156G	.	.	81	4	88	0	.	90
TCHP	84260	ucsc.edu;bcgsc.ca	37	12	110341849	110341849	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TCHP	NM_001143852	exon3	c.C296T	p.A99V	.	.	28	4	59	0	.	91
TCTE1	202500	bcgsc.ca	37	6	44249869	44249869	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TCTE1	NM_182539	exon4	c.T1274C	p.L425P	.	.	138	6	125	0	.	94
TDO2	6999	bcgsc.ca	37	4	156831295	156831295	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TDO2	NM_005651	exon6	c.T550C	p.F184L	.	.	62	4	87	0	.	514
TDRD3	81550	bcgsc.ca	37	13	61102895	61102895	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TDRD3	NM_001146070	exon11	c.C1536A	p.S512S	.	.	72	4	133	0	.	516
TECTA	7007	bcgsc.ca	37	11	121028769	121028769	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TECTA	NM_005422	exon13	c.T4525C	p.C1509R	.	.	48	4	54	0	.	225
TECTA	7007	bcgsc.ca	37	11	121028789	121028789	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TECTA	NM_005422	exon13	c.C4545T	p.T1515T	.	.	62	4	70	0	.	225
TENC1	23371	hgsc.bcm.edu;bcgsc.ca;mdanderson.org	37	12	53457144	53457144	+	Missense_Mutation	SNP	G	G	A	rs201129709		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TENC1	NM_015319	exon27	c.G4034A	p.R1345H	.	.	128	56	114	0	G|0.999;A|0.000	92
TENC1	23371	ucsc.edu;bcgsc.ca	37	12	53453408	53453408	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TENC1	NM_015319	exon18	c.A2013G	p.P671P	.	.	36	4	58	0	.	92
TENM2	57451	broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	5	167674101	167674101	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001122679	exon27	c.A6130G	p.N2044D	.	.	36	15	60	1	.	.
TENM3	55714	ucsc.edu;bcgsc.ca	37	4	183713755	183713755	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001080477	exon25	c.T5930C	p.L1977P	.	.	39	4	49	0	.	.
TENM3	55714	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	183675952	183675952	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001080477	exon21	c.G4432C	p.A1478P	.	.	43	21	91	0	.	.
TEX15	56154	ucsc.edu	37	8	30706461	30706461	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TEX15	NM_031271	exon1	c.A73G	p.S25G	.	.	29	4	120	0	.	97
TGM3	7053	bcgsc.ca	37	20	2312740	2312740	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TGM3	NM_003245	exon10	c.A1426G	p.T476A	.	.	86	4	77	0	.	139
THRA	7067	bcgsc.ca	37	17	38233159	38233159	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	THRA	NM_001190918	exon3	c.A89G	p.N30S	.	.	72	4	77	0	.	186
THSD7B	80731	bcgsc.ca	37	2	138414461	138414461	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	THSD7B	.	.	.	.	.	.	119	5	167	0	.	75
TIAM2	26230	bcgsc.ca	37	6	155566820	155566820	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TIAM2	NM_012454	exon18	c.G3607A	p.G1203R	.	.	78	5	183	0	.	93
TIPARP	25976	bcgsc.ca	37	3	156395903	156395903	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TIPARP	NM_015508	exon2	c.T417C	p.D139D	.	.	92	4	131	0	.	523
TJP2	9414	bcgsc.ca	37	9	71845001	71845001	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TJP2	NM_001170416	exon11	c.T1617C	p.P539P	.	.	58	4	68	0	.	115
TLL1	7092	bcgsc.ca	37	4	166935605	166935605	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TLL1	NM_001204760	exon8	c.C935T	p.T312I	.	.	60	4	124	0	.	158
TLR1	7096	bcgsc.ca	37	4	38799368	38799368	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TLR1	NM_003263	exon4	c.A1085G	p.D362G	.	.	63	4	71	0	.	524
TM2D2	83877	ucsc.edu;bcgsc.ca	37	8	38851161	38851161	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TM2D2	NM_078473	exon3	c.A334G	p.S112G	.	.	27	4	56	0	.	90
TM6SF2	53345	bcgsc.ca	37	19	19381837	19381837	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TM6SF2	NM_001001524	exon2	c.T193C	p.Y65H	.	.	63	4	116	0	.	44
TMED2	10959	bcgsc.ca	37	12	124069288	124069288	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMED2	NM_006815	exon1	c.G105T	p.E35D	.	.	50	4	70	0	.	90
TMEM132B	114795	bcgsc.ca	37	12	126135227	126135227	+	Splice_Site	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM132B	NM_052907	exon7	c.1629-2A>G	.	.	.	21	3	27	0	.	185
TMEM132E	124842	bcgsc.ca	37	17	32957112	32957112	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM132E	NM_207313	exon6	c.T1154C	p.L385P	.	.	116	5	151	0	.	68
TMEM135	65084	bcgsc.ca	37	11	87020593	87020593	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM135	NM_022918	exon10	c.T815C	p.L272P	.	.	86	5	140	0	.	514
TMEM151A	256472	bcgsc.ca	37	11	66062731	66062731	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM151A	NM_153266	exon2	c.G1014A	p.V338V	.	.	43	4	34	0	.	90
TMEM194A	23306	bcgsc.ca	37	12	57457028	57457028	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM194A	NM_001130963	exon7	c.A854G	p.Q285R	.	.	115	5	162	1	.	68
TMEM202	338949	bcgsc.ca	37	15	72700088	72700088	+	Missense_Mutation	SNP	G	G	A	rs143076809		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM202	NM_001080462	exon5	c.G676A	p.V226I	.	.	70	4	98	0	G|1.000;A|0.000	69
TMEM206	55248	bcgsc.ca	37	1	212553247	212553247	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM206	NM_001198862	exon6	c.T811C	p.F271L	.	.	70	4	52	0	.	153
TMEM220	388335	bcgsc.ca	37	17	10618847	10618847	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM220	NM_001004313	exon6	c.T406C	p.F136L	.	.	67	4	168	0	.	90
TMEM225	338661	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	123753908	123753908	+	Silent	SNP	A	A	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	TMEM225,mouth,carcinoma,-1	TMEM225	NM_001013743	exon4	c.T615A	p.R205R	.	.	206	94	201	0	.	93
TMEM254	80195	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	10	81850592	81850592	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001270367	exon4	c.G363C	p.W121C	.	.	89	31	186	0	.	.
TMEM39B	55116	bcgsc.ca	37	1	32541349	32541349	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM39B	NM_018056	exon3	c.T277C	p.F93L	.	.	96	5	131	1	.	90
TMEM57	55219	bcgsc.ca	37	1	25817986	25817986	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM57	NM_018202	exon10	c.T1703C	p.L568P	.	.	65	4	160	0	.	22
TMEM64	169200	bcgsc.ca	37	8	91657612	91657612	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM64	NM_001146273	exon1	c.C522T	p.C174C	.	.	56	4	61	0	.	90
TMEM8B	51754	bcgsc.ca	37	9	35842666	35842666	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM8B	NM_001042590	exon6	c.A231G	p.P77P	.	.	69	4	113	1	.	91
TMEM97	27346	bcgsc.ca	37	17	26653739	26653739	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMEM97	NM_014573	exon3	c.T451C	p.L151L	.	.	157	6	223	0	.	90
TMTC3	160418	bcgsc.ca	37	12	88584381	88584381	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TMTC3	NM_181783	exon12	c.A1688G	p.K563R	.	.	59	4	104	0	.	91
TNFAIP3	7128	ucsc.edu	37	6	138201306	138201306	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TNFAIP3	NM_001270507	exon8	c.A2005G	p.M669V	.	.	47	4	106	0	.	1498
TNFSF13B	10673	bcgsc.ca	37	13	108955922	108955922	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TNFSF13B	NM_006573	exon5	c.A715G	p.T239A	.	.	69	4	94	0	.	659
TNKS	8658	ucsc.edu;bcgsc.ca	37	8	9622231	9622231	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TNKS	NM_003747	exon23	c.A3378G	p.Q1126Q	.	.	44	4	86	0	.	660
TNPO2	30000	ucsc.edu;bcgsc.ca	37	19	12817572	12817572	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TNPO2	NM_013433	exon13	c.G1308T	p.L436L	.	.	42	4	70	0	.	227
TNPO3	23534	bcgsc.ca	37	7	128640589	128640589	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TNPO3	NM_012470	exon7	c.T905C	p.L302P	.	.	151	5	168	0	.	228
TOP1	7150	bcgsc.ca	37	20	39690045	39690045	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TOP1	NM_003286	exon3	c.C70T	p.H24Y	.	.	67	4	58	0	.	1148
TOP2B	7155	bcgsc.ca	37	3	25675463	25675463	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TOP2B	NM_001068	exon8	c.A880G	p.K294E	.	.	56	4	132	0	.	273
TOR1AIP2	163590	bcgsc.ca	37	1	179834236	179834236	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TOR1AIP2	NM_022347	exon3	c.T76C	p.Y26H	.	.	242	6	200	0	.	69
TOX4	9878	bcgsc.ca	37	14	21955791	21955791	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TOX4	NM_014828	exon3	c.T257C	p.V86A	.	.	59	4	126	2	.	91
TP53BP1	7158	bcgsc.ca	37	15	43749264	43749264	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TP53BP1	NM_001141980	exon12	c.A1542G	p.T514T	.	.	87	5	132	0	.	294
TPRG1	285386	bcgsc.ca	37	3	189028187	189028187	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TPRG1	NM_198485	exon5	c.A492G	p.E164E	.	.	51	4	58	0	.	90
TRAIP	10293	bcgsc.ca	37	3	49877723	49877723	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRAIP	NM_005879	exon9	c.A789G	p.E263E	.	.	173	6	167	0	.	849
TRAK2	66008	bcgsc.ca	37	2	202262253	202262253	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRAK2	NM_015049	exon7	c.G741T	p.Q247H	.	.	54	4	64	0	.	90
TRANK1	9881	bcgsc.ca	37	3	36898564	36898564	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRANK1	NM_014831	exon12	c.A2517G	p.K839K	.	.	70	4	83	0	.	24
TRAPPC8	22878	bcgsc.ca	37	18	29487435	29487435	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRAPPC8	NM_014939	exon9	c.A1377G	p.A459A	.	.	53	4	56	0	.	159
TRAPPC9	83696	ucsc.edu;bcgsc.ca	37	8	141034128	141034128	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRAPPC9	NM_031466	exon18	c.A2899G	p.T967A	.	.	46	4	78	0	.	228
TRDN	10345	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	6	123825006	123825006	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRDN	NM_001256020	exon8	c.G651T	p.K217N	.	.	248	209	510	0	.	91
TRIM25	7706	bcgsc.ca	37	17	54969223	54969223	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRIM25	NM_005082	exon9	c.G1731A	p.V577V	.	.	59	4	105	0	.	289
TRIM5	85363	bcgsc.ca	37	11	5701346	5701346	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRIM5	NM_033092	exon2	c.T62C	p.L21P	.	.	153	13	202	6	.	227
TRIM66	9866	bcgsc.ca	37	11	8661931	8661931	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRIM66	NM_014818	exon9	c.A1556G	p.K519R	.	.	75	4	94	0	.	68
TRIM69	140691	bcgsc.ca	37	15	45047551	45047551	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRIM69	NM_182985	exon2	c.T460C	p.S154P	.	.	70	5	70	0	.	90
TRIO	7204	ucsc.edu;bcgsc.ca	37	5	14502722	14502722	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRIO	NM_007118	exon54	c.A8367G	p.K2789K	.	.	38	4	58	0	.	562
TRIP10	9322	bcgsc.ca	37	19	6743745	6743745	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRIP10	NM_004240	exon7	c.T540C	p.S180S	.	.	67	4	78	0	.	228
TRIP12	9320	bcgsc.ca	37	2	230693930	230693930	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRIP12	NM_004238	exon7	c.A1285G	p.R429G	.	.	89	5	126	0	.	572
TRPC4AP	26133	bcgsc.ca	37	20	33622988	33622988	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRPC4AP	NM_199368	exon8	c.A989G	p.D330G	.	.	119	5	132	0	.	91
TRPC7	57113	bcgsc.ca	37	5	135692345	135692345	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001167576	exon2	c.A731G	p.E244G	.	.	122	7	186	0	.	.
TRPM1	4308	bcgsc.ca	37	15	31294773	31294773	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRPM1	NM_001252020	exon27	c.G4181A	p.G1394D	.	.	47	4	85	0	.	94
TRPM7	54822	bcgsc.ca	37	15	50897281	50897281	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TRPM7	NM_017672	exon21	c.T2770C	p.F924L	.	.	85	4	112	0	.	392
TSSK3	81629	bcgsc.ca	37	1	32829657	32829657	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TSSK3	NM_052841	exon2	c.A607G	p.M203V	.	.	139	6	197	0	.	333
TTC28	23331	bcgsc.ca	37	22	28378423	28378423	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001145418	exon23	c.T7232C	p.L2411P	.	.	75	4	72	0	.	.
TTC3	7267	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	21	38572587	38572587	+	Missense_Mutation	SNP	G	G	A	rs200071342		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TTC3	NM_001001894	exon45	c.G5905A	p.V1969M	.	.	138	57	210	0	G|0.999;A|0.001	590
TTC39B	158219	bcgsc.ca	37	9	15188099	15188099	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TTC39B	NM_152574	exon14	c.T1265C	p.V422A	.	.	66	4	127	0	.	187
TTC40	54777	bcgsc.ca	37	10	134660448	134660448	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001200049	exon43	c.G6255A	p.L2085L	.	.	59	4	86	0	.	.
TTC40	54777	bcgsc.ca	37	10	134674005	134674005	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001200049	exon37	c.T5114C	p.L1705P	.	.	77	4	119	1	.	.
TTF1	7270	bcgsc.ca	37	9	135277261	135277261	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TTF1	NM_007344	exon2	c.G948A	p.L316L	.	.	57	4	73	0	.	94
TTI1	9675	ucsc.edu;bcgsc.ca	37	20	36641352	36641352	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TTI1	NM_014657	exon3	c.C867A	p.I289I	.	.	40	4	42	0	.	94
TTLL5	23093	bcgsc.ca	37	14	76186081	76186081	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TTLL5	NM_015072	exon11	c.T846C	p.C282C	.	.	89	4	255	0	.	92
TTN	7273	bcgsc.ca	37	2	179452060	179452060	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TTN	NM_001267550	exon307	c.A63878G	p.D21293G	.	.	224	6	274	2	.	636
TTN	7273	bcgsc.ca	37	2	179490056	179490056	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TTN	NM_001267550	exon241	c.G44492A	p.G14831E	.	.	89	4	135	0	.	636
TTPAL	79183	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	20	43108685	43108685	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TTPAL	NM_001039199	exon2	c.T46G	p.S16A	.	.	60	35	59	0	.	153
TUBE1	51175	bcgsc.ca	37	6	112395946	112395946	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TUBE1	NM_016262	exon9	c.A920G	p.Y307C	.	.	70	4	123	0	.	91
TUBGCP3	10426	bcgsc.ca	37	13	113158405	113158405	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TUBGCP3	NM_006322	exon19	c.G2248A	p.A750T	.	.	60	4	78	0	.	90
TWF1	5756	bcgsc.ca	37	12	44193202	44193202	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TWF1	NM_002822	exon5	c.A482G	p.E161G	.	.	51	4	84	0	.	797
TXNRD3NB	645840	bcgsc.ca	37	3	126291094	126291094	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TXNRD3NB	NM_001039783	exon3	c.A293G	p.E98G	.	.	83	5	98	0	.	68
TYK2	7297	bcgsc.ca	37	19	10477196	10477196	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TYK2	NM_003331	exon6	c.A526G	p.I176V	.	.	72	4	113	0	.	1009
TYROBP	7305	bcgsc.ca	37	19	36395517	36395517	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	TYROBP	NM_003332	exon5	c.C296T	p.S99L	.	.	63	4	85	0	.	90
UBB	7314	bcgsc.ca	37	17	16285866	16285866	+	Silent	SNP	A	A	G	rs201547246		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UBB	NM_018955	exon2	c.A645G	p.K215K	.	.	97	7	221	0	.	47
UBE2K	3093	bcgsc.ca	37	4	39776498	39776498	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UBE2K	NM_005339	exon5	c.C344T	p.A115V	.	.	74	4	92	0	.	23
UBE2Q2	92912	bcgsc.ca	37	15	76170341	76170341	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UBE2Q2	NM_173469	exon7	c.A713G	p.D238G	.	.	238	6	238	1	.	70
UBIAD1	29914	bcgsc.ca	37	1	11345884	11345884	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UBIAD1	NM_013319	exon2	c.A713G	p.E238G	.	.	56	4	90	0	.	90
UBN2	254048	bcgsc.ca	37	7	138954155	138954155	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UBN2	NM_173569	exon8	c.A1482G	p.L494L	.	.	81	4	101	0	.	70
UBR2	23304	bcgsc.ca	37	6	42633948	42633948	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UBR2	NM_015255	exon34	c.G3846T	p.Q1282H	.	.	36	4	37	0	.	94
UBR4	23352	bcgsc.ca	37	1	19503124	19503124	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UBR4	NM_020765	exon20	c.A2735G	p.K912R	.	.	74	4	154	0	.	612
UBR5	51366	bcgsc.ca	37	8	103297363	103297363	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UBR5	NM_015902	exon40	c.A5688G	p.E1896E	.	.	73	4	79	0	.	761
UBXN11	91544	bcgsc.ca	37	1	26612455	26612455	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UBXN11	NM_183008	exon10	c.G633A	p.V211V	.	.	55	4	105	0	.	91
UBXN4	23190	bcgsc.ca	37	2	136499567	136499567	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UBXN4	NM_014607	exon1	c.T68C	p.V23A	.	.	124	6	144	1	.	92
UBXN6	80700	bcgsc.ca	37	19	4448401	4448401	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UBXN6	NM_025241	exon5	c.C453A	p.T151T	.	.	68	4	93	0	.	90
UGT1A5	54579	bcgsc.ca	37	2	234621884	234621884	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UGT1A5	NM_019078	exon1	c.T247C	p.S83P	.	.	83	4	117	0	.	3
UHMK1	127933	bcgsc.ca	37	1	162470036	162470036	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UHMK1	NM_175866	exon2	c.A560G	p.Q187R	.	.	165	5	129	0	.	358
UIMC1	51720	bcgsc.ca	37	5	176378483	176378483	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UIMC1	NM_016290	exon9	c.G1435T	p.D479Y	.	.	184	6	231	0	.	208
UNC13B	10497	bcgsc.ca	37	9	35376071	35376071	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UNC13B	NM_006377	exon14	c.T1415C	p.I472T	.	.	68	4	95	0	.	157
UNC13C	440279	bcgsc.ca	37	15	54915996	54915996	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UNC13C	NM_001080534	exon30	c.T6203C	p.I2068T	.	.	87	5	116	0	.	51
UNC5CL	222643	bcgsc.ca	37	6	41002733	41002733	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UNC5CL	NM_173561	exon2	c.G81T	p.L27L	.	.	21	3	39	0	.	92
UNC80	285175	bcgsc.ca	37	2	210791669	210791669	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UNC80	NM_032504	exon35	c.A5567G	p.H1856R	.	.	168	5	190	0	.	90
UNC93A	54346	ucsc.edu	37	6	167728775	167728775	+	Missense_Mutation	SNP	G	G	A	rs9459921	byfrequency	TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UNC93A	NM_018974	exon8	c.G1209A	p.M403I	.	.	83	12	123	3	G|0.819;A|0.181	90
URB2	9816	bcgsc.ca	37	1	229773963	229773963	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	URB2	NM_014777	exon4	c.C3603T	p.S1201S	.	.	76	4	85	0	.	174
USH2A	7399	bcgsc.ca	37	1	216371843	216371843	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	USH2A	NM_007123	exon18	c.A3895G	p.S1299G	.	.	169	5	229	0	.	115
USP37	57695	bcgsc.ca	37	2	219374813	219374813	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	USP37	NM_020935	exon11	c.T914C	p.L305P	.	.	87	4	103	0	.	661
USP40	55230	bcgsc.ca	37	2	234405437	234405437	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	USP40	NM_018218	exon23	c.T2790C	p.T930T	.	.	50	4	71	0	.	455
USP40	55230	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	2	234394614	234394614	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	USP40	NM_018218	exon28	c.C3240T	p.D1080D	.	.	9	9	22	0	.	455
USP9X	8239	bcgsc.ca	37	X	41075559	41075559	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	USP9X	NM_001039591	exon35	c.C5739G	p.D1913E	.	.	82	4	79	0	.	563
USPL1	10208	bcgsc.ca	37	13	31227312	31227312	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	USPL1	NM_005800	exon8	c.T1266C	p.F422F	.	.	61	4	125	0	.	524
UTP20	27340	bcgsc.ca	37	12	101693551	101693551	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UTP20	NM_014503	exon13	c.C1522T	p.P508S	.	.	93	5	153	0	.	155
UTP6	55813	bcgsc.ca	37	17	30200442	30200442	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	UTP6	NM_018428	exon16	c.C1451T	p.A484V	.	.	85	4	104	0	.	91
VANGL1	81839	bcgsc.ca	37	1	116233781	116233781	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	VANGL1	NM_138959	exon8	c.A1356G	p.Q452Q	.	.	89	4	218	0	.	226
VANGL2	57216	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	160388869	160388869	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	VANGL2	NM_020335	exon4	c.C270T	p.R90R	.	.	115	21	67	0	.	91
VASP	7408	bcgsc.ca	37	19	46021223	46021223	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	VASP	NM_003370	exon3	c.T214C	p.Y72H	.	.	74	4	99	0	.	514
VCL	7414	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	10	75830792	75830792	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	VCL	NM_003373	exon4	c.450delG	p.V150fs	.	.	106	61	201	0	.	93
VCP	7415	bcgsc.ca	37	9	35059679	35059679	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	VCP	NM_007126	exon14	c.G1815A	p.L605L	.	.	63	5	188	0	.	228
VNN1	8876	bcgsc.ca	37	6	133014225	133014225	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	VNN1	NM_004666	exon4	c.C764A	p.A255D	.	.	56	5	115	0	.	93
VPS13D	55187	bcgsc.ca	37	1	12318054	12318054	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	VPS13D	NM_015378	exon10	c.A1004G	p.K335R	.	.	141	6	219	0	.	95
VPS26B	112936	bcgsc.ca	37	11	134095128	134095128	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	VPS26B	NM_052875	exon1	c.T112C	p.F38L	.	.	64	4	78	0	.	90
VPS33A	65082	bcgsc.ca	37	12	122748145	122748145	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	VPS33A	NM_022916	exon3	c.G270C	p.M90I	.	.	79	4	90	0	.	91
VRK1	7443	bcgsc.ca	37	14	97313682	97313682	+	Splice_Site	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	VRK1	NM_003384	exon5	c.374+1G>A	.	.	.	66	4	109	0	.	358
VWA5B1	127731	bcgsc.ca	37	1	20680521	20680521	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001039500	exon22	c.A3413G	p.K1138R	.	.	36	4	72	0	.	.
VWCE	220001	ucsc.edu;bcgsc.ca	37	11	61036446	61036446	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	VWCE	NM_152718	exon15	c.C1830T	p.S610S	.	.	20	4	45	0	.	91
WASF1	8936	bcgsc.ca	37	6	110429752	110429752	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WASF1	NM_001024935	exon5	c.T401C	p.L134P	.	.	56	4	61	0	.	90
WASH2P	375260	broad.mit.edu	37	2	114340570	114340570	+	RNA	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	.	.	.	.	.	.	634	10	763	2	.	.
WDFY2	115825	bcgsc.ca	37	13	52234767	52234767	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDFY2	NM_052950	exon2	c.A173G	p.Q58R	.	.	125	5	202	0	.	90
WDR11	55717	bcgsc.ca	37	10	122659583	122659583	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDR11	NM_018117	exon20	c.T2558C	p.L853P	.	.	102	5	156	0	.	226
WDR17	116966	bcgsc.ca	37	4	177058702	177058702	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDR17	NM_170710	exon10	c.C1371T	p.S457S	.	.	52	4	126	0	.	95
WDR17	116966	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	4	177017675	177017675	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDR17	NM_170710	exon2	c.C5T	p.A2V	.	.	48	17	121	0	.	95
WDR18	57418	ucsc.edu;bcgsc.ca	37	19	994280	994280	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDR18	NM_024100	exon10	c.G1236A	p.L412L	.	.	45	4	63	0	.	91
WDR47	22911	bcgsc.ca	37	1	109554233	109554233	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDR47	NM_001142550	exon5	c.T456C	p.R152R	.	.	43	4	90	0	.	91
WDR55	54853	bcgsc.ca	37	5	140048752	140048752	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDR55	NM_017706	exon6	c.C749T	p.A250V	.	.	58	4	84	0	.	91
WDR59	79726	bcgsc.ca	37	16	74985436	74985436	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDR59	NM_030581	exon4	c.C246A	p.N82K	.	.	69	4	78	0	.	92
WDR60	55112	bcgsc.ca	37	7	158719129	158719129	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDR60	NM_018051	exon19	c.A2408G	p.D803G	.	.	87	4	157	0	.	92
WDR65	149465	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	1	43649280	43649280	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDR65	NM_001195831	exon4	c.G493C	p.D165H	.	.	80	40	140	0	.	91
WDR6	11180	broad.mit.edu;bcgsc.ca	37	3	49053385	49053385	+	Splice_Site	SNP	T	T	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	.	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDR6	.	.	.	.	.	.	86	18	102	0	.	90
WDR67	93594	bcgsc.ca	37	8	124138306	124138306	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDR67	NM_001145088	exon12	c.T1581C	p.C527C	.	.	75	4	49	0	.	226
WDR76	79968	bcgsc.ca	37	15	44153547	44153547	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WDR76	NM_024908	exon12	c.T1579C	p.C527R	.	.	93	4	129	1	.	90
WTIP	126374	ucsc.edu;bcgsc.ca	37	19	34986661	34986661	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	WTIP	NM_001080436	exon7	c.A1137G	p.A379A	.	.	39	4	75	0	.	68
XKR8	55113	bcgsc.ca	37	1	28293174	28293174	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	XKR8	NM_018053	exon3	c.T651C	p.A217A	.	.	77	4	158	0	.	90
XKRX	402415	bcgsc.ca	37	X	100178015	100178015	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	XKRX	NM_212559	exon2	c.G371T	p.W124L	.	.	73	4	86	0	.	130
XPC	7508	bcgsc.ca	37	3	14187458	14187458	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	XPC	NM_004628	exon16	c.C2806A	p.P936T	.	.	88	5	131	0	.	662
XRCC5	7520	bcgsc.ca	37	2	216992303	216992303	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	XRCC5	NM_021141	exon8	c.A843G	p.A281A	.	.	65	4	64	0	.	970
YWHAB	7529	bcgsc.ca	37	20	43530211	43530211	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	YWHAB	NM_003404	exon3	c.A37G	p.K13E	.	.	98	5	96	0	.	660
ZAP70	7535	bcgsc.ca	37	2	98351750	98351750	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZAP70	NM_001079	exon10	c.G1120A	p.G374S	.	.	63	4	84	0	.	955
ZBBX	79740	bcgsc.ca	37	3	167077726	167077726	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZBBX	NM_024687	exon8	c.T364C	p.S122P	.	.	105	5	165	0	.	92
ZBTB7C	201501	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca;mdanderson.org	37	18	45555810	45555810	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZBTB7C	NM_001039360	exon3	c.C1681T	p.R561C	.	.	26	10	33	0	.	91
ZCRB1	85437	bcgsc.ca	37	12	42711142	42711142	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZCRB1	NM_033114	exon5	c.G333A	p.G111G	.	.	48	4	50	0	.	91
ZDHHC13	54503	bcgsc.ca	37	11	19177346	19177346	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZDHHC13	NM_019028	exon9	c.T877C	p.F293L	.	.	138	7	226	1	.	90
ZDHHC22	283576	bcgsc.ca	37	14	77600086	77600086	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_174976	exon3	c.G732A	p.L244L	.	.	70	5	115	0	.	.
ZFHX4	79776	bcgsc.ca	37	8	77764748	77764748	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZFHX4	NM_024721	exon10	c.A5591G	p.K1864R	.	.	99	5	106	0	.	98
ZFP62	643836	bcgsc.ca	37	5	180276532	180276532	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001172638	exon2	c.A1963G	p.R655G	.	.	85	5	119	0	.	.
ZFP69	339559	bcgsc.ca	37	1	40961212	40961212	+	Silent	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_198494	exon6	c.C1062A	p.P354P	.	.	78	4	121	0	.	.
ZFPM2	23414	bcgsc.ca	37	8	106431425	106431425	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZFPM2	NM_012082	exon2	c.A94G	p.T32A	.	.	83	4	102	0	.	139
ZFYVE16	9765	bcgsc.ca	37	5	79735830	79735830	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZFYVE16	NM_001105251	exon5	c.T2398C	p.C800R	.	.	64	4	84	0	.	90
ZMYM2	7750	bcgsc.ca	37	13	20610996	20610996	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZMYM2	NM_001190964	exon13	c.A2239G	p.R747G	.	.	83	4	181	0	.	685
ZMYM6	9204	bcgsc.ca	37	1	35477546	35477546	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZMYM6	NM_007167	exon8	c.T1007C	p.M336T	.	.	89	5	107	0	.	93
ZNF131	7690	bcgsc.ca	37	5	43161525	43161525	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF131	NM_003432	exon5	c.A546G	p.E182E	.	.	58	4	106	0	.	90
ZNF17	7565	bcgsc.ca	37	19	57931590	57931590	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF17	NM_006959	exon3	c.A730G	p.R244G	.	.	80	4	104	0	.	90
ZNF189	7743	bcgsc.ca	37	9	104162260	104162260	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF189	NM_003452	exon2	c.T128C	p.M43T	.	.	81	5	147	0	.	229
ZNF204P	7754	bcgsc.ca	37	6	27326240	27326240	+	RNA	SNP	C	C	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	.	.	.	.	.	.	6	3	17	0	.	.
ZNF214	7761	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	11	7021165	7021165	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF214	NM_013249	exon3	c.A1749C	p.K583N	.	.	66	22	111	0	.	91
ZNF235	9310	bcgsc.ca	37	19	44791407	44791407	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF235	NM_004234	exon5	c.C2181T	p.I727I	.	.	78	4	126	0	.	137
ZNF235	9310	bcgsc.ca	37	19	44792517	44792517	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF235	NM_004234	exon5	c.T1071C	p.N357N	.	.	66	4	82	0	.	137
ZNF24	7572	bcgsc.ca	37	18	32917282	32917282	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF24	NM_006965	exon4	c.G1021A	p.G341R	.	.	82	4	126	0	.	90
ZNF248	57209	bcgsc.ca	37	10	38121861	38121861	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF248	NM_021045	exon6	c.A422G	p.D141G	.	.	67	4	122	0	.	91
ZNF397	84307	bcgsc.ca	37	18	32822741	32822741	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF397	NM_032347	exon2	c.C307T	p.P103S	.	.	70	4	114	0	.	90
ZNF420	147923	ucsc.edu;bcgsc.ca	37	19	37619509	37619509	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF420	NM_144689	exon5	c.C1616T	p.A539V	.	.	45	4	89	0	.	90
ZNF493	284443	ucsc.edu;bcgsc.ca	37	19	21607674	21607674	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF493	NM_001076678	exon4	c.A2213G	p.D738G	.	.	47	4	64	0	.	516
ZNF551	90233	bcgsc.ca	37	19	58199406	58199406	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF551	NM_138347	exon3	c.A1763G	p.E588G	.	.	53	4	63	0	.	91
ZNF578	147660	bcgsc.ca	37	19	53014719	53014719	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001099694	exon6	c.G1085T	p.R362L	.	.	75	5	95	0	.	.
ZNF638	27332	bcgsc.ca	37	2	71577173	71577173	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF638	NM_014497	exon2	c.T1089A	p.H363Q	.	.	53	4	94	0	.	94
ZNF680	340252	bcgsc.ca	37	7	64004685	64004685	+	Silent	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF680	NM_178558	exon2	c.G156A	p.L52L	.	.	78	4	144	0	.	91
ZNF682	91120	bcgsc.ca;mdanderson.org	37	19	20117276	20117276	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF682	NM_033196	exon4	c.A1035G	p.E345E	.	.	38	5	68	0	.	92
ZNF695	57116	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	247162655	247162655	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001204221	exon3	c.A254G	p.H85R	.	.	196	85	310	0	.	.
ZNF704	619279	bcgsc.ca	37	8	81582829	81582829	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF704	NM_001033723	exon5	c.A568G	p.K190E	.	.	87	4	117	0	.	90
ZNF704	619279	bcgsc.ca	37	8	81605303	81605303	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF704	NM_001033723	exon3	c.A261G	p.A87A	.	.	83	5	73	0	.	90
ZNF713	349075	ucsc.edu;bcgsc.ca	37	7	56007647	56007647	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF713	NM_182633	exon4	c.A1241G	p.E414G	.	.	50	4	50	0	.	92
ZNF721	170960	bcgsc.ca	37	4	436925	436925	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF721	NM_133474	exon3	c.T1331T	p.V444V	.	.	54	4	94	0	.	47
ZNF774	342132	bcgsc.ca	37	15	90903603	90903603	+	Silent	SNP	G	G	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF774	NM_001004309	exon4	c.G540T	p.T180T	.	.	39	4	79	0	.	90
ZNF780B	163131	bcgsc.ca	37	19	40542499	40542499	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF780B	NM_001005851	exon5	c.T267C	p.S89S	.	.	80	5	115	0	.	47
ZNF782	158431	bcgsc.ca	37	9	99580677	99580677	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF782	NM_001001662	exon6	c.T1628C	p.F543S	.	.	109	5	187	1	.	90
ZNF782	158431	ucsc.edu;bcgsc.ca	37	9	99581617	99581617	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF782	NM_001001662	exon6	c.C688T	p.L230F	.	.	39	4	93	0	.	90
ZNF804B	219578	bcgsc.ca	37	7	88963822	88963822	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF804B	NM_181646	exon4	c.A1526G	p.K509R	.	.	75	4	98	0	.	101
ZNF804B	219578	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca;mdanderson.org	37	7	88966173	88966173	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF804B	NM_181646	exon4	c.C3877T	p.P1293S	.	.	127	62	211	0	.	101
ZNF805	390980	bcgsc.ca	37	19	57765561	57765561	+	Silent	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001023563	exon4	c.A1374G	p.K458K	.	.	60	6	72	0	.	.
ZNF814	730051	mdanderson.org	37	19	58385762	58385762	+	Silent	SNP	C	C	G	rs199732634		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	NM_001144989	exon3	c.G996C	p.S332S	.	.	213	74	232	3	.	.
ZNF827	152485	bcgsc.ca	37	4	146859547	146859547	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF827	NM_178835	exon1	c.A13G	p.K5E	.	.	97	4	131	0	.	22
ZNF836	162962	bcgsc.ca	37	19	52658731	52658731	+	Silent	SNP	T	T	C	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF836	NM_001102657	exon5	c.A2205G	p.T735T	.	.	76	4	117	0	.	46
ZNF879	345462	bcgsc.ca	37	5	178460166	178460166	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF879	NM_001136116	exon5	c.G1217A	p.G406E	.	.	47	4	101	0	.	47
ZNF99	7652	ucsc.edu;bcgsc.ca	37	19	22941840	22941840	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	C	C	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNF99	NM_001080409	exon4	c.G871A	p.G291S	.	.	42	4	73	0	.	24
ZNRF4	148066	bcgsc.ca	37	19	5456112	5456112	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZNRF4	NM_181710	exon1	c.A610G	p.R204G	.	.	15	3	19	0	.	135
ZSCAN10	84891	ucsc.edu	37	16	3139518	3139518	+	Silent	SNP	G	G	A	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	G	G	.	.	.	.	Unknown	Untested	Somatic	.	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	ZSCAN10	NM_032805	exon5	c.C1752T	p.C584C	.	.	43	4	39	0	.	227
ZNF729	100287226	bcgsc.ca	37	19	22499181	22499182	+	Missense_Mutation	DNP	GG	GG	TT	novel		TCGA-DD-A11C-01A-11D-A12Z-10	TCGA-DD-A11C-11A-11D-A12Z-10	GG	GG	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none	.	.	Illumina HiSeq	a9cde9a5-c0ff-4c01-8182-81c9ef3920e6	d5d8c783-db2c-487c-9cce-1b76137ddc15	.	.	.	.	.	p.G960L	.	.	.	.	.	.	.	
